Rmu_sc0005292.1_g000031

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005292.1
OG0000087
Physical Location & Seq
Reverse (-)
141793 .. 143240
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005292.1_g000031.1.cds

Sequence Viewer

Length: 1227 bp
atgtgggacctgtgccaacaagggtggccttccataaatgaattccgcgcggtacaccgggtactgtactcaaggaagcagtcttgtgcggtgaatgcgccgaagaggaaaccccggaaaggcaaggaggaggatagaatggatgatgcccaattgatggacatgctgatgggccagggagaggacgcctttcacatcgatgtcgacctagggtcgaaaggcacgagtcggtcacttgaagaaactcttctggagatcaccgatgagggatatgatgagcctgaccccgacgctcccgtgacccacgtcgcgcagccttccatggccgatgttatcacgatagatgacaccgggatgggaaaagtaccggtctccgtgcctatttcctctcgttccactgggagcgatgaggtactacttcctggtgagaagaagagatcctataggcaccgacatcggactgataaggaggtgacgtacactggccgggatgttcaaggtattggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttcgcttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgctgatgagaagtttgtgcggtccatgcttggggatctgaaggatattgacctcgaccgggtttgggccaaggataatactccccaggagaatcgccgtcttgcccgggagtcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctgttgaaggaacgagactcattgagggctgaaatggcagcggctaagcagcggatggcggagcttgagggtgaagttgcggaggcgcgggaagaggagaaggcagaccacctggaggatcgccttcccgcggagaagcacgatgccgtggaggagtacaagtcctcggaagagctcatctctatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatatttagatgaagctaaattcaggtggggtctcctggagaaaaagaagaaagattgggaggcggcgaccaagtctggtgccggtgggtcccagagtaccggtggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

408

Amino Acids

45.67

Weight (kDa)

5.5

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 823
Acc36I ACCTGC 1 cut(s) 823
AccB1I GGYRCC 2 cut(s) 447, 1187
AccB7I CCANNNNNTGG 1 cut(s) 157
AccI GTMKAC 1 cut(s) 204
AccII CGCG 5 cut(s) 48, 50, 311, 952, 995
AclWI GGATC 3 cut(s) 432, 672, 990
AcoI YGGCCR 3 cut(s) 324, 484, 1104
AcsI RAATTY 2 cut(s) 41, 1127
AcuI CTGAAG 2 cut(s) 689, 824
AcyI GRCGYC 2 cut(s) 186, 780
AgeI ACCGGT 2 cut(s) 367, 1208
AgsI TTSAA 5 cut(s) 239, 497, 763, 871, 1090
AhdI GACNNNNNGTC 1 cut(s) 211
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 5 cut(s) 174, 421, 714, 975, 1143
AluBI AGCT 5 cut(s) 610, 865, 928, 1039, 1124
AluI AGCT 5 cut(s) 610, 865, 928, 1039, 1124
Alw21I GWGCWC 1 cut(s) 1041
Alw26I GTCTC 3 cut(s) 376, 873, 1145
AlwI GGATC 3 cut(s) 432, 672, 990
AlwNI CAGNNNCTG 1 cut(s) 613
Ama87I CYCGRG 2 cut(s) 532, 735
AoxI GGCC 8 cut(s) 26, 172, 324, 484, 559, 696, 858, 1104
ApeKI GCWGC 7 cut(s) 313, 607, 610, 902, 913, 1055, 1058
ApoI RAATTY 2 cut(s) 41, 1127
AsiGI ACCGGT 2 cut(s) 367, 1208
Asp700I GAANNNNTTC 1 cut(s) 246
AspA2I CCTAGG 1 cut(s) 208
AspLEI GCGC 4 cut(s) 50, 100, 313, 952
AspS9I GGNCC 6 cut(s) 7, 172, 536, 651, 696, 1197
AsuHPI GGTGA 7 cut(s) 103, 250, 437, 484, 521, 847, 947
AvaI CYCGRG 2 cut(s) 532, 735
AvaII GGWCC 4 cut(s) 7, 536, 651, 1197
AvrII CCTAGG 1 cut(s) 208
BaeGI GKGCMC 1 cut(s) 757
BanI GGYRCC 2 cut(s) 447, 1187
BanII GRGCYC 1 cut(s) 1041
BauI CACGAG 1 cut(s) 223
Bbv12I GWGCWC 1 cut(s) 1041
BbvI GCAGC 7 cut(s) 325, 597, 619, 914, 925, 1042, 1045
BccI CCATC 5 cut(s) 151, 163, 349, 608, 913
BceAI ACGGC 3 cut(s) 560, 711, 995
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 5 cut(s) 176, 423, 716, 977, 1145
BcoDI GTCTC 3 cut(s) 376, 873, 1145
BfaI CTAG 1 cut(s) 209
BfmI CTRYAG 1 cut(s) 442
BfuAI ACCTGC 1 cut(s) 823
BlnI CCTAGG 1 cut(s) 208
BlpI GCTNAGC 1 cut(s) 909
Bme18I GGWCC 4 cut(s) 7, 536, 651, 1197
BmeRI GACNNNNNGTC 1 cut(s) 211
BmeT110I CYCGRG 2 cut(s) 532, 735
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 6 cut(s) 7, 172, 536, 651, 696, 1197
BmiI GGNNCC 6 cut(s) 8, 449, 537, 1189, 1198, 1199
BmrI ACTGGG 1 cut(s) 408
BmsI GCATC 3 cut(s) 136, 738, 997
BmuI ACTGGG 1 cut(s) 408
BoxI GACNNNNGTC 2 cut(s) 305, 541
BplI GAGNNNNNCTC 2 cut(s) 1028, 1060
BpmI CTGGAG 3 cut(s) 272, 998, 1166
Bpu1102I GCTNAGC 1 cut(s) 909
BpuEI CTTGAG 2 cut(s) 55, 950
Bsa29I ATCGAT 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 798
BsaHI GRCGYC 2 cut(s) 186, 780
BsaI GGTCTC 2 cut(s) 376, 1145
BsaWI WCCGGW 3 cut(s) 367, 580, 1208
BsaXI ACNNNNNCTCC 4 cut(s) 461, 491, 1010, 1040
Bse118I RCCGGY 3 cut(s) 367, 1190, 1208
Bse1I ACTGG 2 cut(s) 403, 487
Bse8I GATNNNNATC 1 cut(s) 798
BseBI CCWGG 5 cut(s) 176, 423, 716, 977, 1145
BseCI ATCGAT 1 cut(s) 198
BseGI GGATG 4 cut(s) 148, 360, 496, 924
BseJI GATNNNNATC 1 cut(s) 798
BseMII CTCAG 1 cut(s) 605
BseNI ACTGG 2 cut(s) 403, 487
BseRI GAGGAG 4 cut(s) 143, 824, 974, 1031
BseSI GKGCMC 1 cut(s) 757
BseX3I CGGCCG 1 cut(s) 1104
BseXI GCAGC 7 cut(s) 325, 597, 619, 914, 925, 1042, 1045
Bsh1236I CGCG 5 cut(s) 48, 50, 311, 952, 995
Bsh1285I CGRYCG 3 cut(s) 688, 1107, 1219
BshFI GGCC 8 cut(s) 28, 174, 326, 486, 561, 698, 860, 1106
BshNI GGYRCC 2 cut(s) 447, 1187
BshTI ACCGGT 2 cut(s) 367, 1208
BshVI ATCGAT 1 cut(s) 198
BsiEI CGRYCG 3 cut(s) 688, 1107, 1219
BsiHKAI GWGCWC 1 cut(s) 1041
BsiHKCI CYCGRG 2 cut(s) 532, 735
BslFI GGGAC 3 cut(s) 20, 549, 1183
BsmAI GTCTC 3 cut(s) 376, 873, 1145
BsmFI GGGAC 3 cut(s) 20, 549, 1183
BsmI GAATGC 1 cut(s) 100
BsnI GGCC 8 cut(s) 28, 174, 326, 486, 561, 698, 860, 1106
Bso31I GGTCTC 2 cut(s) 376, 1145
BsoBI CYCGRG 2 cut(s) 532, 735
Bsp1286I GDGCHC 2 cut(s) 757, 1041
Bsp143I GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
Bsp1720I GCTNAGC 1 cut(s) 909
Bsp19I CCATGG 1 cut(s) 321
BspANI GGCC 8 cut(s) 28, 174, 326, 486, 561, 698, 860, 1106
BspCNI CTCAG 1 cut(s) 606
BspDI ATCGAT 1 cut(s) 198
BspFNI CGCG 5 cut(s) 48, 50, 311, 952, 995
BspHI TCATGA 1 cut(s) 1080
BspLI GGNNCC 6 cut(s) 8, 449, 537, 1189, 1198, 1199
BspMI ACCTGC 1 cut(s) 823
BspPI GGATC 3 cut(s) 432, 672, 990
BspQI GCTCTTC 1 cut(s) 1029
BspT107I GGYRCC 2 cut(s) 447, 1187
BspTNI GGTCTC 2 cut(s) 376, 1145
BsrFI RCCGGY 3 cut(s) 367, 1190, 1208
BsrI ACTGG 2 cut(s) 403, 487
BssAI RCCGGY 3 cut(s) 367, 1190, 1208
BssMI GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
BssNI GRCGYC 2 cut(s) 186, 780
BssSI CACGAG 1 cut(s) 223
BssT1I CCWWGG 3 cut(s) 208, 321, 699
Bst2BI CACGAG 1 cut(s) 223
Bst2UI CCWGG 5 cut(s) 176, 423, 716, 977, 1145
Bst4CI ACNGT 1 cut(s) 66
Bst6I CTCTTC 7 cut(s) 98, 252, 428, 506, 764, 951, 1029
BstACI GRCGYC 2 cut(s) 186, 780
BstC8I GCNNGC 3 cut(s) 753, 784, 1053
BstDEI CTNAG 2 cut(s) 614, 909
BstDSI CCRYGG 3 cut(s) 321, 993, 1011
BstF5I GGATG 4 cut(s) 148, 360, 496, 924
BstFNI CGCG 5 cut(s) 48, 50, 311, 952, 995
BstHHI GCGC 4 cut(s) 50, 100, 313, 952
BstKTI GATC 6 cut(s) 258, 440, 529, 667, 985, 1219
BstMAI GTCTC 3 cut(s) 376, 873, 1145
BstMBI GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
BstMCI CGRYCG 3 cut(s) 688, 1107, 1219
BstMWI GCNNNNNNNGC 5 cut(s) 95, 604, 655, 779, 899
BstNI CCWGG 5 cut(s) 176, 423, 716, 977, 1145
BstNSI RCATGY 1 cut(s) 166
BstPAI GACNNNNGTC 2 cut(s) 305, 541
BstSFI CTRYAG 1 cut(s) 442
BstSLI GKGCMC 1 cut(s) 757
BstUI CGCG 5 cut(s) 48, 50, 311, 952, 995
BstV1I GCAGC 7 cut(s) 325, 597, 619, 914, 925, 1042, 1045
BstX2I RGATCY 2 cut(s) 437, 664
BstYI RGATCY 2 cut(s) 437, 664
BstZI CGGCCG 1 cut(s) 1104
Bsu15I ATCGAT 1 cut(s) 198
BsuRI GGCC 8 cut(s) 28, 174, 326, 486, 561, 698, 860, 1106
BsuTUI ATCGAT 1 cut(s) 198
BtgI CCRYGG 3 cut(s) 321, 993, 1011
BtgZI GCGATG 1 cut(s) 420
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 4 cut(s) 148, 360, 496, 924
BtsIMutI CAGTG 2 cut(s) 396, 480
BveI ACCTGC 1 cut(s) 823
Cac8I GCNNGC 3 cut(s) 753, 784, 1053
CaiI CAGNNNCTG 1 cut(s) 613
CciI TCATGA 1 cut(s) 1080
CfoI GCGC 4 cut(s) 50, 100, 313, 952
Cfr10I RCCGGY 3 cut(s) 367, 1190, 1208
Cfr13I GGNCC 6 cut(s) 7, 172, 536, 651, 696, 1197
Cfr42I CCGCGG 1 cut(s) 996
Cfr9I CCCGGG 2 cut(s) 532, 735
ClaI ATCGAT 1 cut(s) 198
CseI GACGC 3 cut(s) 194, 299, 788
CspAI ACCGGT 2 cut(s) 367, 1208
CspCI CAANNNNNGTGG 2 cut(s) 5, 40
CviAII CATG 5 cut(s) 163, 322, 655, 848, 1081
DdeI CTNAG 2 cut(s) 614, 909
DpnI GATC 6 cut(s) 257, 439, 528, 666, 984, 1218
DpnII GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
DriI GACNNNNNGTC 1 cut(s) 211
EaeI YGGCCR 3 cut(s) 324, 484, 1104
EagI CGGCCG 1 cut(s) 1104
Eam1104I CTCTTC 7 cut(s) 98, 252, 428, 506, 764, 951, 1029
Eam1105I GACNNNNNGTC 1 cut(s) 211
EarI CTCTTC 7 cut(s) 98, 252, 428, 506, 764, 951, 1029
EciI GGCGGA 1 cut(s) 938
Ecl136II GAGCTC 1 cut(s) 1039
EclXI CGGCCG 1 cut(s) 1104
Eco130I CCWWGG 3 cut(s) 208, 321, 699
Eco24I GRGCYC 1 cut(s) 1041
Eco31I GGTCTC 2 cut(s) 376, 1145
Eco47I GGWCC 4 cut(s) 7, 536, 651, 1197
Eco52I CGGCCG 1 cut(s) 1104
Eco53kI GAGCTC 1 cut(s) 1039
Eco57I CTGAAG 2 cut(s) 689, 824
Eco88I CYCGRG 2 cut(s) 532, 735
EcoICRI GAGCTC 1 cut(s) 1039
EcoO109I RGGNCCY 2 cut(s) 7, 1197
EcoRI GAATTC 1 cut(s) 41
EcoRII CCWGG 5 cut(s) 174, 421, 714, 975, 1143
EcoT14I CCWWGG 3 cut(s) 208, 321, 699
EcoT38I GRGCYC 1 cut(s) 1041
ErhI CCWWGG 3 cut(s) 208, 321, 699
FaeI CATG 5 cut(s) 166, 325, 658, 851, 1084
FaiI YATR 9 cut(s) 35, 164, 273, 323, 444, 656, 849, 1049, 1082
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 3 cut(s) 20, 549, 1183
FatI CATG 5 cut(s) 162, 321, 654, 847, 1080
FauI CCCGC 4 cut(s) 580, 744, 945, 1000
FblI GTMKAC 1 cut(s) 204
FokI GGATG 4 cut(s) 155, 367, 503, 931
FriOI GRGCYC 1 cut(s) 1041
FspBI CTAG 1 cut(s) 209
GlaI GCGC 4 cut(s) 49, 99, 312, 951
GsuI CTGGAG 3 cut(s) 272, 998, 1166
HaeIII GGCC 8 cut(s) 28, 174, 326, 486, 561, 698, 860, 1106
HgaI GACGC 3 cut(s) 194, 299, 788
HhaI GCGC 4 cut(s) 50, 100, 313, 952
Hin1I GRCGYC 2 cut(s) 186, 780
Hin1II CATG 5 cut(s) 166, 325, 658, 851, 1084
Hin6I GCGC 4 cut(s) 48, 98, 311, 950
HinP1I GCGC 4 cut(s) 48, 98, 311, 950
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HinfI GANTC 5 cut(s) 226, 542, 721, 740, 881
HphI GGTGA 7 cut(s) 103, 250, 437, 484, 521, 847, 947
Hpy166II GTNNAC 4 cut(s) 55, 205, 480, 769
Hpy188I TCNGA 4 cut(s) 459, 669, 804, 1033
Hpy188III TCNNGA 3 cut(s) 251, 337, 1081
Hpy8I GTNNAC 4 cut(s) 55, 205, 480, 769
Hpy99I CGWCG 3 cut(s) 293, 311, 550
HpyAV CCTTC 9 cut(s) 39, 327, 561, 664, 799, 850, 865, 958, 998
HpyCH4III ACNGT 1 cut(s) 66
HpyCH4IV ACGT 2 cut(s) 306, 476
HpyF10VI GCNNNNNNNGC 5 cut(s) 95, 604, 655, 779, 899
HpyF3I CTNAG 2 cut(s) 614, 909
HpySE526I ACGT 2 cut(s) 306, 476
Hsp92I GRCGYC 2 cut(s) 186, 780
Hsp92II CATG 5 cut(s) 166, 325, 658, 851, 1084
HspAI GCGC 4 cut(s) 48, 98, 311, 950
KflI GGGWCCC 1 cut(s) 1197
KspI CCGCGG 1 cut(s) 996
Kzo9I GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
LguI GCTCTTC 1 cut(s) 1029
LmnI GCTCC 3 cut(s) 298, 402, 925
Lsp1109I GCAGC 7 cut(s) 325, 597, 619, 914, 925, 1042, 1045
LweI GCATC 3 cut(s) 136, 738, 997
MaeI CTAG 1 cut(s) 209
MaeII ACGT 2 cut(s) 306, 476
MaeIII GTNAC 3 cut(s) 231, 298, 472
MalI GATC 6 cut(s) 257, 439, 528, 666, 984, 1218
MboI GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
MfeI CAATTG 1 cut(s) 152
MflI RGATCY 2 cut(s) 437, 664
MhlI GDGCHC 2 cut(s) 757, 1041
MluCI AATT 3 cut(s) 41, 152, 1127
MlyI GAGTC 4 cut(s) 235, 551, 749, 875
MroXI GAANNNNTTC 1 cut(s) 246
MslI CAYNNNNRTG 4 cut(s) 167, 198, 353, 1046
MspA1I CMGCKG 4 cut(s) 610, 905, 916, 995
MunI CAATTG 1 cut(s) 152
Mva1269I GAATGC 1 cut(s) 100
MvaI CCWGG 5 cut(s) 176, 423, 716, 977, 1145
MvnI CGCG 5 cut(s) 48, 50, 311, 952, 995
MwoI GCNNNNNNNGC 5 cut(s) 95, 604, 655, 779, 899
NcoI CCATGG 1 cut(s) 321
NdeII GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
NlaIII CATG 5 cut(s) 166, 325, 658, 851, 1084
NlaIV GGNNCC 6 cut(s) 8, 449, 537, 1189, 1198, 1199
NmuCI GTSAC 3 cut(s) 231, 298, 472
NspI RCATGY 1 cut(s) 166
PagI TCATGA 1 cut(s) 1080
PaqCI CACCTGC 1 cut(s) 823
PciSI GCTCTTC 1 cut(s) 1029
PcsI WCGNNNNNNNCGW 1 cut(s) 221
PctI GAATGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 246
PfeI GAWTC 1 cut(s) 721
PflFI GACNNNGTC 1 cut(s) 1180
PflMI CCANNNNNTGG 1 cut(s) 157
PfoI TCCNGGA 1 cut(s) 1143
PinAI ACCGGT 2 cut(s) 367, 1208
Ple19I CGATCG 1 cut(s) 1219
PleI GAGTC 4 cut(s) 234, 550, 748, 875
PpsI GAGTC 4 cut(s) 234, 550, 748, 875
PpuMI RGGWCCY 2 cut(s) 7, 1197
PshAI GACNNNNGTC 2 cut(s) 305, 541
Psp124BI GAGCTC 1 cut(s) 1041
Psp5II RGGWCCY 2 cut(s) 7, 1197
Psp6I CCWGG 5 cut(s) 174, 421, 714, 975, 1143
PspGI CCWGG 5 cut(s) 174, 421, 714, 975, 1143
PspN4I GGNNCC 6 cut(s) 8, 449, 537, 1189, 1198, 1199
PspPI GGNCC 6 cut(s) 7, 172, 536, 651, 696, 1197
PspPPI RGGWCCY 2 cut(s) 7, 1197
PstNI CAGNNNCTG 1 cut(s) 613
PsuI RGATCY 2 cut(s) 437, 664
PsyI GACNNNGTC 1 cut(s) 1180
PvuI CGATCG 1 cut(s) 1219
PvuII CAGCTG 1 cut(s) 610
RseI CAYNNNNRTG 4 cut(s) 167, 198, 353, 1046
SacI GAGCTC 1 cut(s) 1041
SacII CCGCGG 1 cut(s) 996
SalI GTCGAC 1 cut(s) 203
SapI GCTCTTC 1 cut(s) 1029
Sau3AI GATC 6 cut(s) 255, 437, 526, 664, 982, 1216
Sau96I GGNCC 6 cut(s) 7, 172, 536, 651, 696, 1197
SchI GAGTC 4 cut(s) 235, 551, 749, 875
SduI GDGCHC 2 cut(s) 757, 1041
SfaNI GCATC 3 cut(s) 136, 738, 997
SfcI CTRYAG 1 cut(s) 442
Sfr303I CCGCGG 1 cut(s) 996
SgrBI CCGCGG 1 cut(s) 996
SinI GGWCC 4 cut(s) 7, 536, 651, 1197
SmaI CCCGGG 2 cut(s) 534, 737
SmiMI CAYNNNNRTG 4 cut(s) 167, 198, 353, 1046
SmlI CTYRAG 2 cut(s) 70, 929
SmoI CTYRAG 2 cut(s) 70, 929
Sse9I AATT 3 cut(s) 41, 152, 1127
SspMI CTAG 1 cut(s) 209
SstI GAGCTC 1 cut(s) 1041
StyI CCWWGG 3 cut(s) 208, 321, 699
TaaI ACNGT 1 cut(s) 66
TaiI ACGT 2 cut(s) 309, 479
TaqI TCGA 4 cut(s) 198, 204, 215, 684
TaqII GACCGA 1 cut(s) 219
TasI AATT 3 cut(s) 41, 152, 1127
TatI WGTACW 2 cut(s) 66, 1020
TauI GCSGC 3 cut(s) 908, 1106, 1175
TfiI GAWTC 1 cut(s) 721
TscAI CASTG 2 cut(s) 403, 487
TseFI GTSAC 3 cut(s) 231, 298, 472
TseI GCWGC 7 cut(s) 313, 607, 610, 902, 913, 1055, 1058
Tsp45I GTSAC 3 cut(s) 231, 298, 472
TspDTI ATGAA 4 cut(s) 54, 836, 1097, 1134
TspGWI ACGGA 1 cut(s) 364
TspMI CCCGGG 2 cut(s) 532, 735
TspRI CASTG 2 cut(s) 403, 487
Tth111I GACNNNGTC 1 cut(s) 1180
Van91I CCANNNNNTGG 1 cut(s) 157
VpaK11BI GGWCC 4 cut(s) 7, 536, 651, 1197
XapI RAATTY 2 cut(s) 41, 1127
XceI RCATGY 1 cut(s) 166
XcmI CCANNNNNNNNNTGG 1 cut(s) 1208
XmaI CCCGGG 2 cut(s) 532, 735
XmaJI CCTAGG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 204
XmnI GAANNNNTTC 1 cut(s) 246
XspI CTAG 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.