Rmu_sc0001464.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001464.1
OG0000087
Physical Location & Seq
Forward (+)
96773 .. 99582
2810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001464.1_g000021.1.cds

Sequence Viewer

Length: 891 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatagatcgtgaggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagtcacggtggcaattcccgagggcataccgaagcctaggtatgcacttgcagacgggaccgtatgcgacgaacccgggagaagtatgacaatgaatgagatcatcgccatgcgactgaggtggggaataccggacgcggtggagcttaggcctctcagggatggagagcttaccgcgaatcctgcccgggggtgggtggcgctgcacgagaatcagttccaccaaggtatgatggccatgtgggacttgtgccaacaagggtggccttccataaatgaattccgcgcggcactcttcaatgtgtacgcgattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctccatggcgagaaggccaagctggagaaggagcgagactcattgaaggctgagatggccgcagctaagcagcggatcgcgaagcttgagggtgaagtctctgaggcgcgggaagaggagaaggcggactccctggaggatcgccttcccgcggagaggcacgaggccgtggaagagtacaagtcctccgaagagctcatcgctatgctaactgctgctcaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatacctggatgagactaaattcaggaggggtctccttgagaagaagaagaaagatcgggaggcggcgaccaagtctggtgctggtgggtcccagagtaccggtggcgagcggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

296

Amino Acids

32.72

Weight (kDa)

4.85

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 490
Acc36I ACCTGC 1 cut(s) 490
AccBSI CCGCTC 1 cut(s) 886
AccII CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
AclWI GGATC 4 cut(s) 40, 121, 593, 657
AcoI YGGCCR 3 cut(s) 366, 567, 771
AcsI RAATTY 2 cut(s) 410, 794
AcuI CTGAAG 2 cut(s) 84, 491
AcyI GRCGYC 1 cut(s) 447
AfaI GTAC 4 cut(s) 41, 437, 689, 874
AfiI CCNNNNNNNGG 6 cut(s) 21, 320, 324, 325, 661, 666
AgeI ACCGGT 1 cut(s) 875
AgsI TTSAA 3 cut(s) 430, 556, 757
AjnI CCWGG 4 cut(s) 14, 53, 642, 780
AluBI AGCT 7 cut(s) 62, 277, 301, 532, 575, 595, 706
AluI AGCT 7 cut(s) 62, 277, 301, 532, 575, 595, 706
Alw21I GWGCWC 1 cut(s) 708
Alw26I GTCTC 4 cut(s) 540, 613, 782, 812
AlwI GGATC 4 cut(s) 40, 121, 593, 657
Ama87I CYCGRG 3 cut(s) 149, 206, 318
AoxI GGCC 8 cut(s) 123, 281, 366, 395, 525, 567, 675, 771
ApeKI GCWGC 4 cut(s) 334, 572, 580, 725
ApoI RAATTY 2 cut(s) 410, 794
AsiGI ACCGGT 1 cut(s) 875
Asp700I GAANNNNTTC 1 cut(s) 347
AspA2I CCTAGG 1 cut(s) 167
AspLEI GCGC 3 cut(s) 334, 419, 619
AspS9I GGNCC 3 cut(s) 124, 189, 864
AsuC2I CCSGG 6 cut(s) 128, 207, 208, 319, 320, 496
AsuHPI GGTGA 3 cut(s) 110, 514, 614
AvaI CYCGRG 3 cut(s) 149, 206, 318
AvaII GGWCC 2 cut(s) 189, 864
AvrII CCTAGG 1 cut(s) 167
BalI TGGCCA 1 cut(s) 368
BanII GRGCYC 1 cut(s) 708
BauI CACGAG 2 cut(s) 338, 671
BbsI GAAGAC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 708
BbvI GCAGC 4 cut(s) 321, 584, 592, 712
BccI CCATC 3 cut(s) 287, 358, 559
BceAI ACGGC 1 cut(s) 662
BciT130I CCWGG 4 cut(s) 16, 55, 644, 782
BciVI GTATCC 2 cut(s) 19, 770
BcnI CCSGG 6 cut(s) 128, 207, 208, 319, 320, 496
BcoDI GTCTC 4 cut(s) 540, 613, 782, 812
BfaI CTAG 1 cut(s) 168
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 2 cut(s) 19, 770
BisI GCNGC 8 cut(s) 335, 420, 570, 573, 581, 726, 771, 840
BlnI CCTAGG 1 cut(s) 167
BlpI GCTNAGC 1 cut(s) 576
BlsI GCNGC 8 cut(s) 336, 421, 571, 574, 582, 727, 772, 841
Bme18I GGWCC 2 cut(s) 189, 864
BmeT110I CYCGRG 3 cut(s) 149, 206, 318
BmgT120I GGNCC 3 cut(s) 124, 189, 864
BmiI GGNNCC 4 cut(s) 126, 190, 865, 866
BpiI GAAGAC 1 cut(s) 39
BplI GAGNNNNNCTC 2 cut(s) 533, 565
BpmI CTGGAG 2 cut(s) 554, 665
Bpu10I CCTNAGC 1 cut(s) 278
Bpu1102I GCTNAGC 1 cut(s) 576
BpuEI CTTGAG 3 cut(s) 617, 714, 833
BpuMI CCSGG 6 cut(s) 128, 207, 208, 319, 320, 496
BsaBI GATNNNNATC 2 cut(s) 75, 465
BsaHI GRCGYC 1 cut(s) 447
BsaI GGTCTC 1 cut(s) 812
BsaWI WCCGGW 2 cut(s) 262, 875
BsaXI ACNNNNNCTCC 2 cut(s) 680, 710
Bsc4I CCNNNNNNNGG 6 cut(s) 21, 320, 324, 325, 661, 666
Bse118I RCCGGY 1 cut(s) 875
Bse1I ACTGG 1 cut(s) 43
Bse8I GATNNNNATC 2 cut(s) 75, 465
BseBI CCWGG 4 cut(s) 16, 55, 644, 782
BseGI GGATG 2 cut(s) 298, 790
BseJI GATNNNNATC 2 cut(s) 75, 465
BseLI CCNNNNNNNGG 6 cut(s) 21, 320, 324, 325, 661, 666
BseMII CTCAG 4 cut(s) 239, 301, 552, 603
BseNI ACTGG 1 cut(s) 43
BseRI GAGGAG 3 cut(s) 98, 491, 641
BseX3I CGGCCG 1 cut(s) 771
BseXI GCAGC 4 cut(s) 321, 584, 592, 712
BsgI GTGCAG 1 cut(s) 320
Bsh1236I CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
Bsh1285I CGRYCG 1 cut(s) 774
BshFI GGCC 8 cut(s) 125, 283, 368, 397, 527, 569, 677, 773
BshTI ACCGGT 1 cut(s) 875
BsiEI CGRYCG 1 cut(s) 774
BsiHKAI GWGCWC 1 cut(s) 708
BsiHKCI CYCGRG 3 cut(s) 149, 206, 318
BsiSI CCGG 7 cut(s) 128, 207, 263, 319, 495, 774, 876
BslFI GGGAC 3 cut(s) 202, 389, 850
BslI CCNNNNNNNGG 6 cut(s) 21, 320, 324, 325, 661, 666
BsmAI GTCTC 4 cut(s) 540, 613, 782, 812
BsmFI GGGAC 3 cut(s) 202, 389, 850
BsnI GGCC 8 cut(s) 125, 283, 368, 397, 527, 569, 677, 773
Bso31I GGTCTC 1 cut(s) 812
BsoBI CYCGRG 3 cut(s) 149, 206, 318
Bsp1286I GDGCHC 1 cut(s) 708
Bsp143I GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
Bsp1720I GCTNAGC 1 cut(s) 576
Bsp19I CCATGG 1 cut(s) 514
Bsp68I TCGCGA 1 cut(s) 590
BspANI GGCC 8 cut(s) 125, 283, 368, 397, 527, 569, 677, 773
BspCNI CTCAG 4 cut(s) 240, 300, 553, 604
BspFNI CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
BspHI TCATGA 1 cut(s) 747
BspLI GGNNCC 4 cut(s) 126, 190, 865, 866
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 4 cut(s) 40, 121, 593, 657
BspQI GCTCTTC 1 cut(s) 696
BspTNI GGTCTC 1 cut(s) 812
BsrBI CCGCTC 1 cut(s) 886
BsrFI RCCGGY 1 cut(s) 875
BsrI ACTGG 1 cut(s) 43
BssAI RCCGGY 1 cut(s) 875
BssMI GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
BssNI GRCGYC 1 cut(s) 447
BssSI CACGAG 2 cut(s) 338, 671
BssT1I CCWWGG 3 cut(s) 167, 355, 514
Bst2BI CACGAG 2 cut(s) 338, 671
Bst2UI CCWGG 4 cut(s) 16, 55, 644, 782
Bst4CI ACNGT 2 cut(s) 139, 193
Bst6I CTCTTC 4 cut(s) 431, 618, 678, 696
BstACI GRCGYC 1 cut(s) 447
BstC8I GCNNGC 3 cut(s) 60, 451, 884
BstDEI CTNAG 6 cut(s) 248, 278, 287, 561, 576, 612
BstDSI CCRYGG 3 cut(s) 514, 660, 678
BstF5I GGATG 2 cut(s) 298, 790
BstFNI CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 3 cut(s) 334, 419, 619
BstKTI GATC 7 cut(s) 35, 79, 116, 234, 588, 652, 832
BstMAI GTCTC 4 cut(s) 540, 613, 782, 812
BstMBI GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
BstMCI CGRYCG 1 cut(s) 774
BstMWI GCNNNNNNNGC 4 cut(s) 59, 314, 446, 566
BstNI CCWGG 4 cut(s) 16, 55, 644, 782
BstUI CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
BstV1I GCAGC 4 cut(s) 321, 584, 592, 712
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 113
BstYI RGATCY 1 cut(s) 113
BstZI CGGCCG 1 cut(s) 771
BsuI GTATCC 2 cut(s) 19, 770
BsuRI GGCC 8 cut(s) 125, 283, 368, 397, 527, 569, 677, 773
BtgI CCRYGG 3 cut(s) 514, 660, 678
BtgZI GCGATG 2 cut(s) 220, 694
BtsCI GGATG 2 cut(s) 298, 790
BtuMI TCGCGA 1 cut(s) 590
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 3 cut(s) 60, 451, 884
CciI TCATGA 1 cut(s) 747
CfoI GCGC 3 cut(s) 334, 419, 619
Cfr10I RCCGGY 1 cut(s) 875
Cfr13I GGNCC 3 cut(s) 124, 189, 864
Cfr42I CCGCGG 1 cut(s) 663
Cfr9I CCCGGG 2 cut(s) 206, 318
CseI GACGC 2 cut(s) 275, 455
Csp6I GTAC 4 cut(s) 40, 436, 688, 873
CspAI ACCGGT 1 cut(s) 875
CspCI CAANNNNNGTGG 2 cut(s) 374, 409
CviAII CATG 4 cut(s) 241, 370, 515, 748
CviQI GTAC 4 cut(s) 40, 436, 688, 873
DdeI CTNAG 6 cut(s) 248, 278, 287, 561, 576, 612
DpnI GATC 7 cut(s) 34, 78, 115, 233, 587, 651, 831
DpnII GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
EaeI YGGCCR 3 cut(s) 366, 567, 771
EagI CGGCCG 1 cut(s) 771
Eam1104I CTCTTC 4 cut(s) 431, 618, 678, 696
EarI CTCTTC 4 cut(s) 431, 618, 678, 696
EciI GGCGGA 1 cut(s) 650
Ecl136II GAGCTC 1 cut(s) 706
EclXI CGGCCG 1 cut(s) 771
Eco130I CCWWGG 3 cut(s) 167, 355, 514
Eco147I AGGCCT 1 cut(s) 283
Eco24I GRGCYC 1 cut(s) 708
Eco31I GGTCTC 1 cut(s) 812
Eco47I GGWCC 2 cut(s) 189, 864
Eco52I CGGCCG 1 cut(s) 771
Eco53kI GAGCTC 1 cut(s) 706
Eco57I CTGAAG 2 cut(s) 84, 491
Eco88I CYCGRG 3 cut(s) 149, 206, 318
EcoICRI GAGCTC 1 cut(s) 706
EcoO109I RGGNCCY 2 cut(s) 124, 864
EcoRI GAATTC 1 cut(s) 410
EcoRII CCWGG 4 cut(s) 14, 53, 642, 780
EcoT14I CCWWGG 3 cut(s) 167, 355, 514
EcoT38I GRGCYC 1 cut(s) 708
ErhI CCWWGG 3 cut(s) 167, 355, 514
FaeI CATG 4 cut(s) 244, 373, 518, 751
FaqI GGGAC 3 cut(s) 202, 389, 850
FatI CATG 4 cut(s) 240, 369, 514, 747
FauI CCCGC 2 cut(s) 612, 667
Fnu4HI GCNGC 8 cut(s) 335, 420, 570, 573, 581, 726, 771, 840
FokI GGATG 2 cut(s) 305, 797
FriOI GRGCYC 1 cut(s) 708
Fsp4HI GCNGC 8 cut(s) 335, 420, 570, 573, 581, 726, 771, 840
FspBI CTAG 1 cut(s) 168
GlaI GCGC 3 cut(s) 333, 418, 618
GluI GCNGC 8 cut(s) 335, 420, 570, 573, 581, 726, 771, 840
GsuI CTGGAG 2 cut(s) 554, 665
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 8 cut(s) 125, 283, 368, 397, 527, 569, 677, 773
HapII CCGG 7 cut(s) 128, 207, 263, 319, 495, 774, 876
HgaI GACGC 2 cut(s) 275, 455
HhaI GCGC 3 cut(s) 334, 419, 619
Hin1I GRCGYC 1 cut(s) 447
Hin1II CATG 4 cut(s) 244, 373, 518, 751
Hin6I GCGC 3 cut(s) 332, 417, 617
HinP1I GCGC 3 cut(s) 332, 417, 617
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 6 cut(s) 5, 86, 310, 343, 548, 638
HpaII CCGG 7 cut(s) 128, 207, 263, 319, 495, 774, 876
HphI GGTGA 3 cut(s) 110, 514, 614
Hpy166II GTNNAC 1 cut(s) 436
Hpy188I TCNGA 5 cut(s) 10, 91, 471, 613, 700
Hpy188III TCNNGA 7 cut(s) 80, 149, 589, 731, 748, 799, 833
Hpy8I GTNNAC 1 cut(s) 436
Hpy99I CGWCG 3 cut(s) 40, 95, 203
HpyAV CCTTC 7 cut(s) 408, 466, 517, 532, 550, 625, 665
HpyCH4III ACNGT 2 cut(s) 139, 193
HpyCH4V TGCA 3 cut(s) 176, 182, 337
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 314, 446, 566
HpyF3I CTNAG 6 cut(s) 248, 278, 287, 561, 576, 612
Hsp92I GRCGYC 1 cut(s) 447
Hsp92II CATG 4 cut(s) 244, 373, 518, 751
HspAI GCGC 3 cut(s) 332, 417, 617
KflI GGGWCCC 1 cut(s) 864
KspI CCGCGG 1 cut(s) 663
Kzo9I GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 2 cut(s) 274, 541
Lsp1109I GCAGC 4 cut(s) 321, 584, 592, 712
MaeI CTAG 1 cut(s) 168
MaeIII GTNAC 1 cut(s) 133
MalI GATC 7 cut(s) 34, 78, 115, 233, 587, 651, 831
MbiI CCGCTC 1 cut(s) 886
MboI GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
MboII GAAGA 9 cut(s) 39, 418, 470, 635, 695, 713, 829, 832, 835
MflI RGATCY 1 cut(s) 113
MhlI GDGCHC 1 cut(s) 708
MlsI TGGCCA 1 cut(s) 368
MluCI AATT 3 cut(s) 144, 410, 794
MluNI TGGCCA 1 cut(s) 368
MlyI GAGTC 3 cut(s) 95, 542, 632
MmeI TCCRAC 1 cut(s) 114
Mox20I TGGCCA 1 cut(s) 368
MroXI GAANNNNTTC 1 cut(s) 347
MscI TGGCCA 1 cut(s) 368
MslI CAYNNNNRTG 2 cut(s) 239, 713
Msp20I TGGCCA 1 cut(s) 368
MspA1I CMGCKG 2 cut(s) 583, 662
MspI CCGG 7 cut(s) 128, 207, 263, 319, 495, 774, 876
MvaI CCWGG 4 cut(s) 16, 55, 644, 782
MvnI CGCG 8 cut(s) 269, 308, 417, 419, 440, 590, 619, 662
MwoI GCNNNNNNNGC 4 cut(s) 59, 314, 446, 566
NciI CCSGG 6 cut(s) 128, 207, 208, 319, 320, 496
NcoI CCATGG 1 cut(s) 514
NdeII GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
NlaIII CATG 4 cut(s) 244, 373, 518, 751
NlaIV GGNNCC 4 cut(s) 126, 190, 865, 866
NmuCI GTSAC 1 cut(s) 133
NruI TCGCGA 1 cut(s) 590
PagI TCATGA 1 cut(s) 747
PaqCI CACCTGC 1 cut(s) 490
PceI AGGCCT 1 cut(s) 283
PciSI GCTCTTC 1 cut(s) 696
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PdmI GAANNNNTTC 1 cut(s) 347
PfeI GAWTC 3 cut(s) 5, 310, 343
PflFI GACNNNGTC 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 875
PkrI GCNGC 8 cut(s) 336, 421, 571, 574, 582, 727, 772, 841
PleI GAGTC 3 cut(s) 94, 542, 632
PpsI GAGTC 3 cut(s) 94, 542, 632
PpuMI RGGWCCY 1 cut(s) 864
Psp124BI GAGCTC 1 cut(s) 708
Psp5II RGGWCCY 1 cut(s) 864
Psp6I CCWGG 4 cut(s) 14, 53, 642, 780
PspGI CCWGG 4 cut(s) 14, 53, 642, 780
PspN4I GGNNCC 4 cut(s) 126, 190, 865, 866
PspPI GGNCC 3 cut(s) 124, 189, 864
PspPPI RGGWCCY 1 cut(s) 864
PsuI RGATCY 1 cut(s) 113
PsyI GACNNNGTC 1 cut(s) 847
RruI TCGCGA 1 cut(s) 590
RsaI GTAC 4 cut(s) 41, 437, 689, 874
RsaNI GTAC 4 cut(s) 40, 436, 688, 873
RseI CAYNNNNRTG 2 cut(s) 239, 713
SacI GAGCTC 1 cut(s) 708
SacII CCGCGG 1 cut(s) 663
SapI GCTCTTC 1 cut(s) 696
SatI GCNGC 8 cut(s) 335, 420, 570, 573, 581, 726, 771, 840
Sau3AI GATC 7 cut(s) 32, 76, 113, 231, 585, 649, 829
Sau96I GGNCC 3 cut(s) 124, 189, 864
SchI GAGTC 3 cut(s) 95, 542, 632
SduI GDGCHC 1 cut(s) 708
Sfr303I CCGCGG 1 cut(s) 663
SgrBI CCGCGG 1 cut(s) 663
SinI GGWCC 2 cut(s) 189, 864
SmaI CCCGGG 2 cut(s) 208, 320
SmiMI CAYNNNNRTG 2 cut(s) 239, 713
SmlI CTYRAG 3 cut(s) 596, 729, 812
SmoI CTYRAG 3 cut(s) 596, 729, 812
Sse9I AATT 3 cut(s) 144, 410, 794
SseBI AGGCCT 1 cut(s) 283
SspMI CTAG 1 cut(s) 168
SstI GAGCTC 1 cut(s) 708
StuI AGGCCT 1 cut(s) 283
StyI CCWWGG 3 cut(s) 167, 355, 514
TaaI ACNGT 2 cut(s) 139, 193
TasI AATT 3 cut(s) 144, 410, 794
TatI WGTACW 1 cut(s) 687
TauI GCSGC 4 cut(s) 422, 572, 773, 842
TfiI GAWTC 3 cut(s) 5, 310, 343
TseFI GTSAC 1 cut(s) 133
TseI GCWGC 4 cut(s) 334, 572, 580, 725
Tsp45I GTSAC 1 cut(s) 133
TspDTI ATGAA 3 cut(s) 239, 423, 764
TspMI CCCGGG 2 cut(s) 206, 318
Tth111I GACNNNGTC 1 cut(s) 847
VpaK11BI GGWCC 2 cut(s) 189, 864
XapI RAATTY 2 cut(s) 410, 794
XcmI CCANNNNNNNNNTGG 1 cut(s) 875
XmaI CCCGGG 2 cut(s) 206, 318
XmaJI CCTAGG 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 347
XspI CTAG 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.