Rw1G021100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000087
Physical Location & Seq
Forward (+)
45005572 .. 45006250
679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G021100.1

Sequence Viewer

Length: 612 bp
ATGCTTGGTGACCTGAAGGACATTGACCTCGACCGGGTGCGGGCCAAGGACAATACGCCCCAAGAGAATCGCCGTCTTGCTCGGGAATCCATGATGTGGGCACTCTTCAATATGTATGCGATTGACGCCAGCGAGGAAGATACTCATCTGAAGGAGGAGGTTAGCAATCTCTCCGGGCAGGTGAAGTATCTCCATGTCGAGAAGGCCAAGCTGAAGAAGGAGCGAGACTCATTGAAGGCTGAGATGGCCGCAGCTAAGCAGCGGATCGCGGAGCTTGAGGGTGAAGTCTCTGAGGCGCGGGAAGAGGTGAAAAACGCTCGGGACTCCGAGAAAAAAGCTGCAAAGTCTACCGTGTCATGGAAGGAGAAGGCGGACTCCCTGGAGGATCGCCTTCCCGCGGAGAGGCACGAGGCCGTGGAAGAGTATAAGTCCTCCGAAGAGCTCATCGCTATGCTAACTGCTGCTCAAGATAAGGCTATCATCATGAAGTTCAAGGAGTGGGTGGTGGCCGGATACCTGGATGAGGCTAAATTCAGGAGGGGTCTCCTTAAGAAGAAGAAGAAAGATCGGGAGGCGGCGACCAAGTCTGGTGCCGCTGGCGAGCGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

203

Amino Acids

23.16

Weight (kDa)

6.88

Isoelectric Point (pI)

32.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 590
AccB7I CCANNNNNTGG 1 cut(s) 96
AccBSI CCGCTC 1 cut(s) 604
AccI GTMKAC 1 cut(s) 347
AccII CGCG 3 cut(s) 269, 298, 398
AclWI GGATC 2 cut(s) 272, 393
AcoI YGGCCR 2 cut(s) 246, 507
AcsI RAATTY 1 cut(s) 530
AcuI CTGAAG 3 cut(s) 35, 170, 233
AcyI GRCGYC 1 cut(s) 126
AfiI CCNNNNNNNGG 7 cut(s) 34, 40, 96, 357, 397, 402, 523
AflII CTTAAG 1 cut(s) 548
AgsI TTSAA 3 cut(s) 109, 235, 493
AjnI CCWGG 2 cut(s) 378, 516
AluBI AGCT 5 cut(s) 211, 254, 274, 338, 442
AluI AGCT 5 cut(s) 211, 254, 274, 338, 442
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 3 cut(s) 219, 292, 548
AlwI GGATC 2 cut(s) 272, 393
Ama87I CYCGRG 2 cut(s) 81, 318
AoxI GGCC 5 cut(s) 42, 204, 246, 411, 507
ApeKI GCWGC 4 cut(s) 251, 259, 338, 461
ApoI RAATTY 1 cut(s) 530
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 1 cut(s) 42
AsuC2I CCSGG 2 cut(s) 35, 175
AsuHPI GGTGA 4 cut(s) 20, 193, 293, 319
AvaI CYCGRG 2 cut(s) 81, 318
BaeGI GKGCMC 1 cut(s) 103
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 444
BauI CACGAG 1 cut(s) 407
Bbv12I GWGCWC 1 cut(s) 444
BbvI GCAGC 4 cut(s) 263, 271, 325, 448
BccI CCATC 1 cut(s) 238
BceAI ACGGC 2 cut(s) 57, 398
BciT130I CCWGG 2 cut(s) 380, 518
BciVI GTATCC 1 cut(s) 506
BcnI CCSGG 2 cut(s) 35, 175
BcoDI GTCTC 3 cut(s) 219, 292, 548
BfrI CTTAAG 1 cut(s) 548
BfuAI ACCTGC 1 cut(s) 169
BfuI GTATCC 1 cut(s) 506
BisI GCNGC 7 cut(s) 249, 252, 260, 339, 462, 576, 594
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 7 cut(s) 250, 253, 261, 340, 463, 577, 595
Bme1390I CCNGG 4 cut(s) 35, 175, 380, 518
BmeT110I CYCGRG 2 cut(s) 81, 318
BmgT120I GGNCC 1 cut(s) 42
BmiI GGNNCC 1 cut(s) 592
BmrFI CCNGG 4 cut(s) 35, 175, 380, 518
BplI GAGNNNNNCTC 2 cut(s) 212, 244
BpmI CTGGAG 1 cut(s) 401
Bpu1102I GCTNAGC 1 cut(s) 255
BpuEI CTTGAG 2 cut(s) 296, 450
BpuMI CCSGG 2 cut(s) 35, 175
BsaBI GATNNNNATC 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 548
BsaJI CCNNGG 4 cut(s) 45, 378, 396, 414
Bsc4I CCNNNNNNNGG 7 cut(s) 34, 40, 96, 357, 397, 402, 523
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 2 cut(s) 380, 518
BseDI CCNNGG 4 cut(s) 45, 378, 396, 414
BseGI GGATG 1 cut(s) 526
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 7 cut(s) 34, 40, 96, 357, 397, 402, 523
BseMII CTCAG 2 cut(s) 231, 282
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 103
BseXI GCAGC 4 cut(s) 263, 271, 325, 448
Bsh1236I CGCG 3 cut(s) 269, 298, 398
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 5 cut(s) 44, 206, 248, 413, 509
BshNI GGYRCC 1 cut(s) 590
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 1 cut(s) 444
BsiHKCI CYCGRG 2 cut(s) 81, 318
BsiSI CCGG 3 cut(s) 34, 174, 510
BslFI GGGAC 1 cut(s) 335
BslI CCNNNNNNNGG 7 cut(s) 34, 40, 96, 357, 397, 402, 523
BsmAI GTCTC 3 cut(s) 219, 292, 548
BsmFI GGGAC 1 cut(s) 335
BsnI GGCC 5 cut(s) 44, 206, 248, 413, 509
Bso31I GGTCTC 1 cut(s) 548
BsoBI CYCGRG 2 cut(s) 81, 318
Bsp1286I GDGCHC 2 cut(s) 103, 444
Bsp143I GATC 3 cut(s) 264, 385, 565
Bsp1720I GCTNAGC 1 cut(s) 255
BspANI GGCC 5 cut(s) 44, 206, 248, 413, 509
BspCNI CTCAG 2 cut(s) 232, 283
BspFNI CGCG 3 cut(s) 269, 298, 398
BspHI TCATGA 1 cut(s) 483
BspLI GGNNCC 1 cut(s) 592
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 2 cut(s) 272, 393
BspQI GCTCTTC 1 cut(s) 432
BspT107I GGYRCC 1 cut(s) 590
BspTI CTTAAG 1 cut(s) 548
BspTNI GGTCTC 1 cut(s) 548
BsrBI CCGCTC 1 cut(s) 604
BssECI CCNNGG 4 cut(s) 45, 378, 396, 414
BssMI GATC 3 cut(s) 264, 385, 565
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 45
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 2 cut(s) 380, 518
Bst4CI ACNGT 1 cut(s) 352
Bst6I CTCTTC 4 cut(s) 110, 297, 414, 432
BstACI GRCGYC 1 cut(s) 126
BstAFI CTTAAG 1 cut(s) 548
BstC8I GCNNGC 4 cut(s) 42, 130, 598, 602
BstDEI CTNAG 3 cut(s) 240, 255, 291
BstDSI CCRYGG 2 cut(s) 396, 414
BstEII GGTNACC 1 cut(s) 8
BstENI CCTNNNNNAGG 1 cut(s) 521
BstF5I GGATG 1 cut(s) 526
BstFNI CGCG 3 cut(s) 269, 298, 398
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 3 cut(s) 267, 388, 568
BstMAI GTCTC 3 cut(s) 219, 292, 548
BstMBI GATC 3 cut(s) 264, 385, 565
BstMCI CGRYCG 1 cut(s) 34
BstMWI GCNNNNNNNGC 2 cut(s) 125, 245
BstNI CCWGG 2 cut(s) 380, 518
BstPI GGTNACC 1 cut(s) 8
BstSCI CCNGG 4 cut(s) 33, 173, 378, 516
BstSLI GKGCMC 1 cut(s) 103
BstUI CGCG 3 cut(s) 269, 298, 398
BstV1I GCAGC 4 cut(s) 263, 271, 325, 448
BsuI GTATCC 1 cut(s) 506
BsuRI GGCC 5 cut(s) 44, 206, 248, 413, 509
BtgI CCRYGG 2 cut(s) 396, 414
BtgZI GCGATG 1 cut(s) 430
BtsCI GGATG 1 cut(s) 526
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 42, 130, 598, 602
CciI TCATGA 1 cut(s) 483
CfoI GCGC 1 cut(s) 298
Cfr13I GGNCC 1 cut(s) 42
Cfr42I CCGCGG 1 cut(s) 399
CseI GACGC 1 cut(s) 134
CviAII CATG 4 cut(s) 91, 194, 357, 484
DdeI CTNAG 3 cut(s) 240, 255, 291
DpnI GATC 3 cut(s) 266, 387, 567
DpnII GATC 3 cut(s) 264, 385, 565
EaeI YGGCCR 2 cut(s) 246, 507
Eam1104I CTCTTC 4 cut(s) 110, 297, 414, 432
EarI CTCTTC 4 cut(s) 110, 297, 414, 432
EciI GGCGGA 1 cut(s) 386
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 1 cut(s) 45
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 1 cut(s) 548
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 3 cut(s) 35, 170, 233
Eco88I CYCGRG 2 cut(s) 81, 318
Eco91I GGTNACC 1 cut(s) 8
EcoICRI GAGCTC 1 cut(s) 442
EcoNI CCTNNNNNAGG 1 cut(s) 521
EcoO65I GGTNACC 1 cut(s) 8
EcoRII CCWGG 2 cut(s) 378, 516
EcoT14I CCWWGG 1 cut(s) 45
EcoT38I GRGCYC 1 cut(s) 444
ErhI CCWWGG 1 cut(s) 45
FaeI CATG 4 cut(s) 94, 197, 360, 487
FaiI YATR 8 cut(s) 92, 113, 117, 195, 358, 426, 452, 485
FaqI GGGAC 1 cut(s) 335
FatI CATG 4 cut(s) 90, 193, 356, 483
FauI CCCGC 3 cut(s) 33, 291, 403
FblI GTMKAC 1 cut(s) 347
Fnu4HI GCNGC 7 cut(s) 249, 252, 260, 339, 462, 576, 594
FokI GGATG 1 cut(s) 533
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 7 cut(s) 249, 252, 260, 339, 462, 576, 594
GlaI GCGC 1 cut(s) 297
GluI GCNGC 7 cut(s) 249, 252, 260, 339, 462, 576, 594
GsuI CTGGAG 1 cut(s) 401
HaeIII GGCC 5 cut(s) 44, 206, 248, 413, 509
HapII CCGG 3 cut(s) 34, 174, 510
HgaI GACGC 1 cut(s) 134
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 126
Hin1II CATG 4 cut(s) 94, 197, 360, 487
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HinfI GANTC 5 cut(s) 67, 86, 227, 323, 374
HpaII CCGG 3 cut(s) 34, 174, 510
HphI GGTGA 4 cut(s) 20, 193, 293, 319
Hpy166II GTNNAC 1 cut(s) 348
Hpy188I TCNGA 4 cut(s) 150, 292, 328, 436
Hpy188III TCNNGA 7 cut(s) 83, 199, 320, 467, 484, 535, 569
Hpy8I GTNNAC 1 cut(s) 348
HpyAV CCTTC 8 cut(s) 10, 145, 196, 211, 229, 355, 361, 401
HpyCH4III ACNGT 1 cut(s) 352
HpyCH4V TGCA 1 cut(s) 341
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 245
HpyF3I CTNAG 3 cut(s) 240, 255, 291
Hsp92I GRCGYC 1 cut(s) 126
Hsp92II CATG 4 cut(s) 94, 197, 360, 487
HspAI GCGC 1 cut(s) 296
KspI CCGCGG 1 cut(s) 399
Kzo9I GATC 3 cut(s) 264, 385, 565
LguI GCTCTTC 1 cut(s) 432
LmnI GCTCC 2 cut(s) 220, 271
Lsp1109I GCAGC 4 cut(s) 263, 271, 325, 448
MaeIII GTNAC 1 cut(s) 8
MalI GATC 3 cut(s) 266, 387, 567
MbiI CCGCTC 1 cut(s) 604
MboI GATC 3 cut(s) 264, 385, 565
MboII GAAGA 9 cut(s) 97, 149, 226, 314, 431, 449, 565, 568, 571
MhlI GDGCHC 2 cut(s) 103, 444
MluCI AATT 1 cut(s) 530
MlyI GAGTC 3 cut(s) 221, 317, 368
MseI TTAA 1 cut(s) 549
MslI CAYNNNNRTG 1 cut(s) 449
MspA1I CMGCKG 3 cut(s) 262, 398, 596
MspCI CTTAAG 1 cut(s) 548
MspI CCGG 3 cut(s) 34, 174, 510
MspR9I CCNGG 4 cut(s) 35, 175, 380, 518
MvaI CCWGG 2 cut(s) 380, 518
MvnI CGCG 3 cut(s) 269, 298, 398
MwoI GCNNNNNNNGC 2 cut(s) 125, 245
NciI CCSGG 2 cut(s) 35, 175
NdeII GATC 3 cut(s) 264, 385, 565
NlaIII CATG 4 cut(s) 94, 197, 360, 487
NlaIV GGNNCC 1 cut(s) 592
NmuCI GTSAC 1 cut(s) 8
PagI TCATGA 1 cut(s) 483
PaqCI CACCTGC 1 cut(s) 169
PciSI GCTCTTC 1 cut(s) 432
PfeI GAWTC 2 cut(s) 67, 86
PflFI GACNNNGTC 1 cut(s) 583
PflMI CCANNNNNTGG 1 cut(s) 96
PkrI GCNGC 7 cut(s) 250, 253, 261, 340, 463, 577, 595
PleI GAGTC 3 cut(s) 221, 317, 368
PpsI GAGTC 3 cut(s) 221, 317, 368
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 2 cut(s) 378, 516
PspEI GGTNACC 1 cut(s) 8
PspGI CCWGG 2 cut(s) 378, 516
PspN4I GGNNCC 1 cut(s) 592
PspPI GGNCC 1 cut(s) 42
PsyI GACNNNGTC 1 cut(s) 583
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 444
SacII CCGCGG 1 cut(s) 399
SapI GCTCTTC 1 cut(s) 432
SaqAI TTAA 1 cut(s) 549
SatI GCNGC 7 cut(s) 249, 252, 260, 339, 462, 576, 594
Sau3AI GATC 3 cut(s) 264, 385, 565
Sau96I GGNCC 1 cut(s) 42
SchI GAGTC 3 cut(s) 221, 317, 368
ScrFI CCNGG 4 cut(s) 35, 175, 380, 518
SduI GDGCHC 2 cut(s) 103, 444
Sfr303I CCGCGG 1 cut(s) 399
SgrBI CCGCGG 1 cut(s) 399
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 3 cut(s) 275, 465, 548
SmoI CTYRAG 3 cut(s) 275, 465, 548
Sse9I AATT 1 cut(s) 530
SstI GAGCTC 1 cut(s) 444
StyD4I CCNGG 4 cut(s) 33, 173, 378, 516
StyI CCWWGG 1 cut(s) 45
TaaI ACNGT 1 cut(s) 352
TaqI TCGA 2 cut(s) 30, 198
TasI AATT 1 cut(s) 530
TauI GCSGC 3 cut(s) 251, 578, 596
TfiI GAWTC 2 cut(s) 67, 86
Tru1I TTAA 1 cut(s) 549
Tru9I TTAA 1 cut(s) 549
TseFI GTSAC 1 cut(s) 8
TseI GCWGC 4 cut(s) 251, 259, 338, 461
Tsp45I GTSAC 1 cut(s) 8
TspDTI ATGAA 1 cut(s) 500
Tth111I GACNNNGTC 1 cut(s) 583
Van91I CCANNNNNTGG 1 cut(s) 96
Vha464I CTTAAG 1 cut(s) 548
XagI CCTNNNNNAGG 1 cut(s) 521
XapI RAATTY 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.