Rmu_sc0001483.1_g000026

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001483.1
OG0000087
Physical Location & Seq
Forward (+)
131797 .. 133588
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001483.1_g000026.1.cds

Sequence Viewer

Length: 1647 bp
atgctaactagagtcccctcggattctaacgttaacactattcgacaaatatacaatatgatggccatgtgggatttgtgtcaacaagggtggccttccgtaaatgaatttcgcgcggtacacagggtcctgtactcaaggaagctgtcctgtgcgggtgcggtgacatttgccgctagggattacgaaccattagttaccgacatgccttcctcgatgagcaaaaggtggaggaataaagtatttctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccaggcctatactttatccgaggtagaaaggaagaggatagcccgggtatatgttgtttggacagagaaagagaagagctcttatagattcatccggcattctatactttataggctagggctaagatggctccccgtgaaagcgccgaagaggaaaccccggaaaggcaaagaggaggacataatggatgataatcagttgatggatatgctgatgggccagggagaagacgcccttcacattgatgtcgacctagggtcgaagggtgtgagccggtccattgaagagacccttctggagatcactgatgcgggatatggggaacctgatcctgacgctcccgtgacccaagtcgtgcagccttctgctgctgacgtcgtcacgatagctgataccgggatgggaaaggtaccggtctccgtgtctatttcttctcgctccactcggagccatgaggcattgcttccaggtgagaagaaaagatcacataggcaccggcacctaagtgataagcaggaggcgacgtataccggccgggatgttaagggatccggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttcgcttggcttgttgtctcctgccattccggtaatccccaagaagcctattaagcagctgttgagtgagtacggggttgctgatgaaaagtttgtgcggtccatgcttagtgacctgaaggacattgacctcgaccgggtgcgggccaaggacaatacacccaaagagaatcgccgtctcgcccgggaatccatgatgcgggcactcttcaatgtgtacgctattgatgccagcgaggaagatactcatatgaaggaggaggttagcaatctcttcgggcaggtgaagtatctgcatggcgagaaggccaagctggagaaggagtgggactcaatgattgccgagatggacgcggctaagcagcgaatcgtggagcttgagggtgaaatctctgaggcgcgggaagaggtgaaaagtgctcgggactctgaaaaaaaagctgcagagcctgccatgtcatggaaggagaaggcagactaccttgaggatcgccttcccgtggagaagcacgaggccgtggaggagtacaagtcctcccaagagctcattgttatgctaactgctgctcaagataaggctgtcattatgaagttcaaggagtgggtggcggccgggtacttggatgaagccaaattcaggtggggtcttcttgagaaaaagaagaaagatcaggaggcggtggtcaagtctggtgccggtggatcccagagtaccggtggcgagcagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

548

Amino Acids

61.99

Weight (kDa)

8.72

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1189
AatII GACGTC 1 cut(s) 696
Acc36I ACCTGC 1 cut(s) 1189
Acc65I GGTACC 2 cut(s) 296, 727
AccB1I GGYRCC 5 cut(s) 296, 727, 810, 816, 1610
AccB7I CCANNNNNTGG 1 cut(s) 1377
AccI GTMKAC 2 cut(s) 567, 845
AccII CGCG 4 cut(s) 114, 116, 1271, 1318
AclI AACGTT 1 cut(s) 30
AclWI GGATC 6 cut(s) 641, 861, 874, 1413, 1614, 1627
AcoI YGGCCR 3 cut(s) 63, 850, 1527
AcsI RAATTY 2 cut(s) 107, 1550
AcuI CTGAAG 1 cut(s) 1055
AcyI GRCGYC 2 cut(s) 549, 693
AfaI GTAC 9 cut(s) 120, 134, 298, 729, 989, 1136, 1445, 1535, 1630
AfiI CCNNNNNNNGG 8 cut(s) 482, 923, 1054, 1060, 1116, 1377, 1417, 1554
AgeI ACCGGT 3 cut(s) 293, 730, 1631
AgsI TTSAA 3 cut(s) 602, 1129, 1513
AhdI GACNNNNNGTC 1 cut(s) 574
AjnI CCWGG 3 cut(s) 318, 537, 784
AleI CACNNNNGTG 1 cut(s) 822
Alw21I GWGCWC 3 cut(s) 398, 1339, 1464
Alw26I GTCTC 4 cut(s) 599, 739, 939, 1100
AlwI GGATC 6 cut(s) 641, 861, 874, 1413, 1614, 1627
AlwNI CAGNNNCTG 1 cut(s) 1367
Ama87I CYCGRG 4 cut(s) 360, 898, 1101, 1338
AoxI GGCC 9 cut(s) 63, 92, 321, 535, 850, 1062, 1224, 1431, 1527
ApeKI GCWGC 7 cut(s) 286, 676, 686, 973, 1279, 1358, 1481
ApoI RAATTY 2 cut(s) 107, 1550
AsiGI ACCGGT 3 cut(s) 293, 730, 1631
Asp718I GGTACC 2 cut(s) 296, 727
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 3 cut(s) 116, 463, 1318
AspS9I GGNCC 7 cut(s) 127, 316, 535, 594, 902, 1017, 1062
AsuHPI GGTGA 6 cut(s) 175, 800, 887, 1213, 1313, 1339
AvaI CYCGRG 4 cut(s) 360, 898, 1101, 1338
AvaII GGWCC 5 cut(s) 127, 316, 594, 902, 1017
AvrII CCTAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 1123
BalI TGGCCA 1 cut(s) 65
BamHI GGATCC 2 cut(s) 866, 1619
BanI GGYRCC 5 cut(s) 296, 727, 810, 816, 1610
BanII GRGCYC 2 cut(s) 398, 1464
BarI GAAGNNNNNNTAC 2 cut(s) 1379, 1411
BauI CACGAG 1 cut(s) 1427
BbsI GAAGAC 2 cut(s) 552, 1556
Bbv12I GWGCWC 3 cut(s) 398, 1339, 1464
BbvI GCAGC 7 cut(s) 298, 673, 688, 985, 1291, 1345, 1468
BccI CCATC 6 cut(s) 55, 438, 514, 526, 712, 1258
BceAI ACGGC 2 cut(s) 1077, 1418
BcgI CGANNNNNNTGC 2 cut(s) 1174, 1208
BciT130I CCWGG 3 cut(s) 320, 539, 786
BcoDI GTCTC 4 cut(s) 599, 739, 939, 1100
BfaI CTAG 5 cut(s) 9, 177, 248, 434, 572
BfmI CTRYAG 1 cut(s) 1359
BfoI RGCGCY 1 cut(s) 464
BfuAI ACCTGC 1 cut(s) 1189
BlnI CCTAGG 1 cut(s) 571
BlpI GCTNAGC 1 cut(s) 1275
Bme18I GGWCC 5 cut(s) 127, 316, 594, 902, 1017
BmeRI GACNNNNNGTC 1 cut(s) 574
BmeT110I CYCGRG 4 cut(s) 360, 898, 1101, 1338
BmgT120I GGNCC 7 cut(s) 127, 316, 535, 594, 902, 1017, 1062
BmsI GCATC 3 cut(s) 616, 1104, 1135
BoxI GACNNNNGTC 2 cut(s) 668, 907
BpiI GAAGAC 2 cut(s) 552, 1556
BplI GAGNNNNNCTC 4 cut(s) 380, 412, 1232, 1264
BpmI CTGGAG 2 cut(s) 635, 1253
Bpu1102I GCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 5 cut(s) 121, 1316, 1421, 1470, 1589
BsaBI GATNNNNATC 1 cut(s) 510
BsaHI GRCGYC 2 cut(s) 549, 693
BsaI GGTCTC 2 cut(s) 599, 739
BsaWI WCCGGW 5 cut(s) 293, 730, 869, 946, 1631
BsaXI ACNNNNNCTCC 8 cut(s) 827, 857, 1226, 1256, 1433, 1436, 1463, 1466
Bsc4I CCNNNNNNNGG 8 cut(s) 482, 923, 1054, 1060, 1116, 1377, 1417, 1554
Bse118I RCCGGY 7 cut(s) 293, 591, 730, 813, 848, 1613, 1631
Bse3DI GCAATG 1 cut(s) 776
Bse8I GATNNNNATC 1 cut(s) 510
BseBI CCWGG 3 cut(s) 320, 539, 786
BseGI GGATG 5 cut(s) 408, 511, 723, 862, 1546
BseJI GATNNNNATC 1 cut(s) 510
BseLI CCNNNNNNNGG 8 cut(s) 482, 923, 1054, 1060, 1116, 1377, 1417, 1554
BseMI GCAATG 1 cut(s) 776
BseMII CTCAG 1 cut(s) 1302
BseRI GAGGAG 3 cut(s) 506, 1190, 1454
BseSI GKGCMC 1 cut(s) 1123
BseX3I CGGCCG 2 cut(s) 850, 1527
BseXI GCAGC 7 cut(s) 298, 673, 688, 985, 1291, 1345, 1468
BseYI CCCAGC 1 cut(s) 251
BsgI GTGCAG 1 cut(s) 695
Bsh1236I CGCG 4 cut(s) 114, 116, 1271, 1318
Bsh1285I CGRYCG 3 cut(s) 853, 1054, 1530
BshFI GGCC 9 cut(s) 65, 94, 323, 537, 852, 1064, 1226, 1433, 1529
BshNI GGYRCC 5 cut(s) 296, 727, 810, 816, 1610
BshTI ACCGGT 3 cut(s) 293, 730, 1631
BsiEI CGRYCG 3 cut(s) 853, 1054, 1530
BsiHKAI GWGCWC 3 cut(s) 398, 1339, 1464
BsiHKCI CYCGRG 4 cut(s) 360, 898, 1101, 1338
BslFI GGGAC 4 cut(s) 329, 915, 1259, 1355
BslI CCNNNNNNNGG 8 cut(s) 482, 923, 1054, 1060, 1116, 1377, 1417, 1554
BsmAI GTCTC 4 cut(s) 599, 739, 939, 1100
BsmBI CGTCTC 1 cut(s) 1100
BsmFI GGGAC 4 cut(s) 329, 915, 1259, 1355
BsmI GAATGC 1 cut(s) 415
BsnI GGCC 9 cut(s) 65, 94, 323, 537, 852, 1064, 1226, 1433, 1529
Bso31I GGTCTC 2 cut(s) 599, 739
BsoBI CYCGRG 4 cut(s) 360, 898, 1101, 1338
Bsp1286I GDGCHC 4 cut(s) 398, 1123, 1339, 1464
Bsp143I GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
Bsp1720I GCTNAGC 1 cut(s) 1275
BspANI GGCC 9 cut(s) 65, 94, 323, 537, 852, 1064, 1226, 1433, 1529
BspCNI CTCAG 1 cut(s) 1303
BspFNI CGCG 4 cut(s) 114, 116, 1271, 1318
BspMAI CTGCAG 1 cut(s) 1363
BspMI ACCTGC 1 cut(s) 1189
BspPI GGATC 6 cut(s) 641, 861, 874, 1413, 1614, 1627
BspQI GCTCTTC 1 cut(s) 386
BspT107I GGYRCC 5 cut(s) 296, 727, 810, 816, 1610
BspTNI GGTCTC 2 cut(s) 599, 739
BsrDI GCAATG 1 cut(s) 776
BsrFI RCCGGY 7 cut(s) 293, 591, 730, 813, 848, 1613, 1631
BssAI RCCGGY 7 cut(s) 293, 591, 730, 813, 848, 1613, 1631
BssMI GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
BssNAI GTATAC 1 cut(s) 846
BssNI GRCGYC 2 cut(s) 549, 693
BssSI CACGAG 1 cut(s) 1427
BssT1I CCWWGG 2 cut(s) 571, 1065
Bst1107I GTATAC 1 cut(s) 846
Bst2BI CACGAG 1 cut(s) 1427
Bst2UI CCWGG 3 cut(s) 320, 539, 786
Bst6I CTCTTC 8 cut(s) 344, 386, 461, 597, 872, 1130, 1196, 1317
BstACI GRCGYC 2 cut(s) 549, 693
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstC8I GCNNGC 5 cut(s) 1062, 1119, 1150, 1368, 1640
BstDEI CTNAG 5 cut(s) 440, 821, 1025, 1275, 1311
BstDSI CCRYGG 2 cut(s) 1416, 1434
BstF5I GGATG 5 cut(s) 408, 511, 723, 862, 1546
BstFNI CGCG 4 cut(s) 114, 116, 1271, 1318
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 3 cut(s) 116, 463, 1318
BstKTI GATC 8 cut(s) 621, 649, 803, 869, 895, 1408, 1588, 1622
BstMAI GTCTC 4 cut(s) 599, 739, 939, 1100
BstMBI GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
BstMCI CGRYCG 3 cut(s) 853, 1054, 1530
BstMWI GCNNNNNNNGC 5 cut(s) 445, 970, 1021, 1145, 1367
BstNI CCWGG 3 cut(s) 320, 539, 786
BstNSI RCATGY 1 cut(s) 208
BstPAI GACNNNNGTC 2 cut(s) 668, 907
BstSFI CTRYAG 1 cut(s) 1359
BstSLI GKGCMC 1 cut(s) 1123
BstUI CGCG 4 cut(s) 114, 116, 1271, 1318
BstV1I GCAGC 7 cut(s) 298, 673, 688, 985, 1291, 1345, 1468
BstV2I GAAGAC 2 cut(s) 552, 1556
BstX2I RGATCY 2 cut(s) 866, 1619
BstYI RGATCY 2 cut(s) 866, 1619
BstZ17I GTATAC 1 cut(s) 846
BstZI CGGCCG 2 cut(s) 850, 1527
BsuRI GGCC 9 cut(s) 65, 94, 323, 537, 852, 1064, 1226, 1433, 1529
BtgI CCRYGG 2 cut(s) 1416, 1434
BtsCI GGATG 5 cut(s) 408, 511, 723, 862, 1546
BtsIMutI CAGTG 1 cut(s) 621
BveI ACCTGC 1 cut(s) 1189
Cac8I GCNNGC 5 cut(s) 1062, 1119, 1150, 1368, 1640
CaiI CAGNNNCTG 1 cut(s) 1367
CfoI GCGC 3 cut(s) 116, 463, 1318
Cfr10I RCCGGY 7 cut(s) 293, 591, 730, 813, 848, 1613, 1631
Cfr13I GGNCC 7 cut(s) 127, 316, 535, 594, 902, 1017, 1062
Cfr9I CCCGGG 3 cut(s) 360, 898, 1101
CseI GACGC 3 cut(s) 557, 662, 1277
Csp6I GTAC 9 cut(s) 119, 133, 297, 728, 988, 1135, 1444, 1534, 1629
CspAI ACCGGT 3 cut(s) 293, 730, 1631
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 8 cut(s) 67, 205, 770, 1021, 1111, 1214, 1372, 1377
CviQI GTAC 9 cut(s) 119, 133, 297, 728, 988, 1135, 1444, 1534, 1629
DdeI CTNAG 5 cut(s) 440, 821, 1025, 1275, 1311
DpnI GATC 8 cut(s) 620, 648, 802, 868, 894, 1407, 1587, 1621
DpnII GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
DriI GACNNNNNGTC 1 cut(s) 574
EaeI YGGCCR 3 cut(s) 63, 850, 1527
EagI CGGCCG 2 cut(s) 850, 1527
Eam1104I CTCTTC 8 cut(s) 344, 386, 461, 597, 872, 1130, 1196, 1317
Eam1105I GACNNNNNGTC 1 cut(s) 574
EarI CTCTTC 8 cut(s) 344, 386, 461, 597, 872, 1130, 1196, 1317
Ecl136II GAGCTC 2 cut(s) 396, 1462
EclXI CGGCCG 2 cut(s) 850, 1527
Eco130I CCWWGG 2 cut(s) 571, 1065
Eco147I AGGCCT 1 cut(s) 323
Eco24I GRGCYC 2 cut(s) 398, 1464
Eco31I GGTCTC 2 cut(s) 599, 739
Eco47I GGWCC 5 cut(s) 127, 316, 594, 902, 1017
Eco52I CGGCCG 2 cut(s) 850, 1527
Eco53kI GAGCTC 2 cut(s) 396, 1462
Eco57I CTGAAG 1 cut(s) 1055
Eco88I CYCGRG 4 cut(s) 360, 898, 1101, 1338
EcoICRI GAGCTC 2 cut(s) 396, 1462
EcoO109I RGGNCCY 1 cut(s) 127
EcoRII CCWGG 3 cut(s) 318, 537, 784
EcoT14I CCWWGG 2 cut(s) 571, 1065
EcoT38I GRGCYC 2 cut(s) 398, 1464
ErhI CCWWGG 2 cut(s) 571, 1065
Esp3I CGTCTC 1 cut(s) 1100
FaeI CATG 8 cut(s) 70, 208, 773, 1024, 1114, 1217, 1375, 1380
FalI AAGNNNNNCTT 4 cut(s) 537, 569, 594, 626
FaqI GGGAC 4 cut(s) 329, 915, 1259, 1355
FatI CATG 8 cut(s) 66, 204, 769, 1020, 1110, 1213, 1371, 1376
FauI CCCGC 5 cut(s) 148, 622, 1053, 1110, 1311
FauNDI CATATG 1 cut(s) 1167
FblI GTMKAC 2 cut(s) 567, 845
FokI GGATG 5 cut(s) 395, 518, 730, 869, 1553
FriOI GRGCYC 2 cut(s) 398, 1464
FspBI CTAG 5 cut(s) 9, 177, 248, 434, 572
GlaI GCGC 3 cut(s) 115, 462, 1317
GsaI CCCAGC 1 cut(s) 255
GsuI CTGGAG 2 cut(s) 635, 1253
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 9 cut(s) 65, 94, 323, 537, 852, 1064, 1226, 1433, 1529
HgaI GACGC 3 cut(s) 557, 662, 1277
HhaI GCGC 3 cut(s) 116, 463, 1318
Hin1I GRCGYC 2 cut(s) 549, 693
Hin1II CATG 8 cut(s) 70, 208, 773, 1024, 1114, 1217, 1375, 1380
Hin6I GCGC 3 cut(s) 114, 461, 1316
HinP1I GCGC 3 cut(s) 114, 461, 1316
HincII GTYRAC 3 cut(s) 34, 83, 568
HindII GTYRAC 3 cut(s) 34, 83, 568
HinfI GANTC 9 cut(s) 12, 23, 405, 908, 1087, 1106, 1247, 1284, 1343
HpaI GTTAAC 1 cut(s) 34
HphI GGTGA 6 cut(s) 175, 800, 887, 1213, 1313, 1339
Hpy166II GTNNAC 6 cut(s) 34, 83, 121, 568, 846, 1135
Hpy188I TCNGA 5 cut(s) 22, 337, 765, 1312, 1348
Hpy188III TCNNGA 7 cut(s) 614, 650, 700, 1340, 1487, 1568, 1589
Hpy8I GTNNAC 6 cut(s) 34, 83, 121, 568, 846, 1135
Hpy99I CGWCG 3 cut(s) 698, 844, 916
HpyCH4IV ACGT 3 cut(s) 30, 693, 842
HpyCH4V TGCA 3 cut(s) 676, 1213, 1361
HpyF10VI GCNNNNNNNGC 5 cut(s) 445, 970, 1021, 1145, 1367
HpyF3I CTNAG 5 cut(s) 440, 821, 1025, 1275, 1311
HpySE526I ACGT 3 cut(s) 30, 693, 842
Hsp92I GRCGYC 2 cut(s) 549, 693
Hsp92II CATG 8 cut(s) 70, 208, 773, 1024, 1114, 1217, 1375, 1380
HspAI GCGC 3 cut(s) 114, 461, 1316
KpnI GGTACC 2 cut(s) 300, 731
KspAI GTTAAC 1 cut(s) 34
Kzo9I GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
LguI GCTCTTC 1 cut(s) 386
LmnI GCTCC 5 cut(s) 453, 661, 761, 765, 1291
Lsp1109I GCAGC 7 cut(s) 298, 673, 688, 985, 1291, 1345, 1468
LweI GCATC 3 cut(s) 616, 1104, 1135
MaeI CTAG 5 cut(s) 9, 177, 248, 434, 572
MaeII ACGT 3 cut(s) 30, 693, 842
MaeIII GTNAC 5 cut(s) 163, 196, 661, 697, 1028
MalI GATC 8 cut(s) 620, 648, 802, 868, 894, 1407, 1587, 1621
MboI GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
MflI RGATCY 2 cut(s) 866, 1619
MhlI GDGCHC 4 cut(s) 398, 1123, 1339, 1464
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 3 cut(s) 107, 267, 1550
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 4 cut(s) 21, 917, 1241, 1337
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 4 cut(s) 33, 270, 861, 969
MslI CAYNNNNRTG 3 cut(s) 561, 822, 1469
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 2 cut(s) 289, 976
Mva1269I GAATGC 1 cut(s) 415
MvaI CCWGG 3 cut(s) 320, 539, 786
MvnI CGCG 4 cut(s) 114, 116, 1271, 1318
MwoI GCNNNNNNNGC 5 cut(s) 445, 970, 1021, 1145, 1367
NdeI CATATG 1 cut(s) 1167
NdeII GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
NlaIII CATG 8 cut(s) 70, 208, 773, 1024, 1114, 1217, 1375, 1380
NmeAIII GCCGAG 1 cut(s) 1285
NmuCI GTSAC 4 cut(s) 163, 661, 697, 1028
NspI RCATGY 1 cut(s) 208
OliI CACNNNNGTG 1 cut(s) 822
PaqCI CACCTGC 1 cut(s) 1189
PceI AGGCCT 1 cut(s) 323
PciSI GCTCTTC 1 cut(s) 386
PctI GAATGC 1 cut(s) 415
PfeI GAWTC 5 cut(s) 23, 405, 1087, 1106, 1284
PflFI GACNNNGTC 1 cut(s) 695
PflMI CCANNNNNTGG 1 cut(s) 1377
PinAI ACCGGT 3 cut(s) 293, 730, 1631
PleI GAGTC 4 cut(s) 20, 916, 1241, 1337
PpsI GAGTC 4 cut(s) 20, 916, 1241, 1337
PpuMI RGGWCCY 1 cut(s) 127
PshAI GACNNNNGTC 2 cut(s) 668, 907
Psp124BI GAGCTC 2 cut(s) 398, 1464
Psp1406I AACGTT 1 cut(s) 30
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 3 cut(s) 318, 537, 784
PspFI CCCAGC 1 cut(s) 251
PspGI CCWGG 3 cut(s) 318, 537, 784
PspPI GGNCC 7 cut(s) 127, 316, 535, 594, 902, 1017, 1062
PspPPI RGGWCCY 1 cut(s) 127
PstI CTGCAG 1 cut(s) 1363
PstNI CAGNNNCTG 1 cut(s) 1367
PsuI RGATCY 2 cut(s) 866, 1619
PsyI GACNNNGTC 1 cut(s) 695
PvuII CAGCTG 2 cut(s) 289, 976
RsaI GTAC 9 cut(s) 120, 134, 298, 729, 989, 1136, 1445, 1535, 1630
RsaNI GTAC 9 cut(s) 119, 133, 297, 728, 988, 1135, 1444, 1534, 1629
RseI CAYNNNNRTG 3 cut(s) 561, 822, 1469
SacI GAGCTC 2 cut(s) 398, 1464
SalI GTCGAC 1 cut(s) 566
SapI GCTCTTC 1 cut(s) 386
SaqAI TTAA 4 cut(s) 33, 270, 861, 969
Sau3AI GATC 8 cut(s) 618, 646, 800, 866, 892, 1405, 1585, 1619
Sau96I GGNCC 7 cut(s) 127, 316, 535, 594, 902, 1017, 1062
SchI GAGTC 4 cut(s) 21, 917, 1241, 1337
SduI GDGCHC 4 cut(s) 398, 1123, 1339, 1464
SfaNI GCATC 3 cut(s) 616, 1104, 1135
SfcI CTRYAG 1 cut(s) 1359
SinI GGWCC 5 cut(s) 127, 316, 594, 902, 1017
SmaI CCCGGG 3 cut(s) 362, 900, 1103
SmiMI CAYNNNNRTG 3 cut(s) 561, 822, 1469
SmlI CTYRAG 5 cut(s) 136, 1295, 1400, 1485, 1568
SmoI CTYRAG 5 cut(s) 136, 1295, 1400, 1485, 1568
Sse9I AATT 3 cut(s) 107, 267, 1550
SseBI AGGCCT 1 cut(s) 323
SspMI CTAG 5 cut(s) 9, 177, 248, 434, 572
SstI GAGCTC 2 cut(s) 398, 1464
StuI AGGCCT 1 cut(s) 323
StyI CCWWGG 2 cut(s) 571, 1065
TaiI ACGT 3 cut(s) 33, 696, 845
TaqI TCGA 5 cut(s) 43, 215, 567, 578, 1050
TasI AATT 3 cut(s) 107, 267, 1550
TatI WGTACW 2 cut(s) 132, 1443
TauI GCSGC 3 cut(s) 176, 1274, 1529
TfiI GAWTC 5 cut(s) 23, 405, 1087, 1106, 1284
Tru1I TTAA 4 cut(s) 33, 270, 861, 969
Tru9I TTAA 4 cut(s) 33, 270, 861, 969
TscAI CASTG 1 cut(s) 628
TseFI GTSAC 4 cut(s) 163, 661, 697, 1028
TseI GCWGC 7 cut(s) 286, 676, 686, 973, 1279, 1358, 1481
Tsp45I GTSAC 4 cut(s) 163, 661, 697, 1028
TspDTI ATGAA 6 cut(s) 120, 397, 1017, 1184, 1520, 1557
TspGWI ACGGA 2 cut(s) 88, 727
TspMI CCCGGG 3 cut(s) 360, 898, 1101
TspRI CASTG 1 cut(s) 628
Tth111I GACNNNGTC 1 cut(s) 695
Van91I CCANNNNNTGG 1 cut(s) 1377
VpaK11BI GGWCC 5 cut(s) 127, 316, 594, 902, 1017
XapI RAATTY 2 cut(s) 107, 1550
XceI RCATGY 1 cut(s) 208
XcmI CCANNNNNNNNNTGG 1 cut(s) 1631
XmaI CCCGGG 3 cut(s) 360, 898, 1101
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 2 cut(s) 567, 845
XspI CTAG 5 cut(s) 9, 177, 248, 434, 572
ZraI GACGTC 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.