Rmu_sc0024204.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024204.1
OG0000087
Physical Location & Seq
Forward (+)
1 .. 673
673 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024204.1_g000001.1.cds

Sequence Viewer

Length: 530 bp
gttgtctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagttagtacggtccatgctgggggacctgaaggatattgacctcgaccgggttcgggccaaggataaccctccccaggagaatcgccgtctcgcccgggaatcaatgatgtgggcactcttcaatgagtacgccattgacgccagcgaggaagacactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggtcaagctggagaatgagcgggactcactgagggctgagatggccgccgctaagcagcagattgcggagcttgagggtgaggagaaggcagaccacctggagggtagccttcccgcgaagaggcacgaggccgtggaggagtacaagtcctctgaagagctcatctccatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggccgggtatt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

176

Amino Acids

19.89

Weight (kDa)

5.09

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
Acc36I ACCTGC 1 cut(s) 260
AccBSI CCGCTC 1 cut(s) 314
AccII CGCG 1 cut(s) 411
AciI CCGC 7 cut(s) 10, 314, 340, 343, 360, 409, 519
AcoI YGGCCR 2 cut(s) 337, 520
AcuI CTGAAG 3 cut(s) 126, 261, 469
AcyI GRCGYC 1 cut(s) 217
AfaI GTAC 4 cut(s) 60, 85, 207, 438
AfiI CCNNNNNNNGG 7 cut(s) 97, 125, 131, 152, 395, 415, 485
AgsI TTSAA 2 cut(s) 200, 506
AjnI CCWGG 2 cut(s) 151, 391
AluBI AGCT 4 cut(s) 47, 302, 365, 455
AluI AGCT 4 cut(s) 47, 302, 365, 455
Alw21I GWGCWC 1 cut(s) 457
Alw26I GTCTC 2 cut(s) 10, 171
AlwNI CAGNNNCTG 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 172
AoxI GGCC 4 cut(s) 133, 337, 424, 520
ApeKI GCWGC 5 cut(s) 44, 47, 350, 471, 474
AspS9I GGNCC 3 cut(s) 88, 101, 133
AsuC2I CCSGG 5 cut(s) 126, 173, 174, 266, 524
AsuHPI GGTGA 2 cut(s) 284, 384
AvaI CYCGRG 1 cut(s) 172
AvaII GGWCC 2 cut(s) 88, 101
BaeGI GKGCMC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 457
BauI CACGAG 1 cut(s) 420
BbsI GAAGAC 1 cut(s) 235
Bbv12I GWGCWC 1 cut(s) 457
BbvI GCAGC 5 cut(s) 34, 56, 362, 458, 461
BccI CCATC 2 cut(s) 45, 329
BceAI ACGGC 2 cut(s) 148, 411
BciT130I CCWGG 2 cut(s) 153, 393
BcnI CCSGG 5 cut(s) 126, 173, 174, 266, 524
BcoDI GTCTC 2 cut(s) 10, 171
BfuAI ACCTGC 1 cut(s) 260
BisI GCNGC 8 cut(s) 45, 48, 340, 343, 351, 472, 475, 520
BlpI GCTNAGC 1 cut(s) 346
BlsI GCNGC 8 cut(s) 46, 49, 341, 344, 352, 473, 476, 521
Bme1390I CCNGG 7 cut(s) 126, 153, 173, 174, 266, 393, 524
Bme18I GGWCC 2 cut(s) 88, 101
BmeT110I CYCGRG 1 cut(s) 172
BmgT120I GGNCC 3 cut(s) 88, 101, 133
BmiI GGNNCC 1 cut(s) 102
BmrFI CCNGG 7 cut(s) 126, 153, 173, 174, 266, 393, 524
BpiI GAAGAC 1 cut(s) 235
BplI GAGNNNNNCTC 4 cut(s) 303, 335, 444, 476
BpmI CTGGAG 2 cut(s) 324, 414
Bpu1102I GCTNAGC 1 cut(s) 346
BpuEI CTTGAG 1 cut(s) 387
BpuMI CCSGG 5 cut(s) 126, 173, 174, 266, 524
BsaHI GRCGYC 1 cut(s) 217
BsaJI CCNNGG 4 cut(s) 136, 151, 172, 427
BsaWI WCCGGW 1 cut(s) 17
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 7 cut(s) 97, 125, 131, 152, 395, 415, 485
BseBI CCWGG 2 cut(s) 153, 393
BseDI CCNNGG 4 cut(s) 136, 151, 172, 427
BseLI CCNNNNNNNGG 7 cut(s) 97, 125, 131, 152, 395, 415, 485
BseMII CTCAG 3 cut(s) 42, 315, 322
BseRI GAGGAG 3 cut(s) 261, 390, 447
BseSI GKGCMC 1 cut(s) 194
BseX3I CGGCCG 1 cut(s) 520
BseXI GCAGC 5 cut(s) 34, 56, 362, 458, 461
BseYI CCCAGC 1 cut(s) 95
Bsh1236I CGCG 1 cut(s) 411
Bsh1285I CGRYCG 2 cut(s) 125, 523
BshFI GGCC 4 cut(s) 135, 339, 426, 522
BsiEI CGRYCG 2 cut(s) 125, 523
BsiHKAI GWGCWC 1 cut(s) 457
BsiHKCI CYCGRG 1 cut(s) 172
BsiSI CCGG 5 cut(s) 18, 125, 173, 265, 523
BslFI GGGAC 2 cut(s) 114, 330
BslI CCNNNNNNNGG 7 cut(s) 97, 125, 131, 152, 395, 415, 485
BsmAI GTCTC 2 cut(s) 10, 171
BsmBI CGTCTC 1 cut(s) 171
BsmFI GGGAC 2 cut(s) 114, 330
BsnI GGCC 4 cut(s) 135, 339, 426, 522
BsoBI CYCGRG 1 cut(s) 172
Bsp1286I GDGCHC 2 cut(s) 194, 457
Bsp1720I GCTNAGC 1 cut(s) 346
BspACI CCGC 7 cut(s) 10, 314, 340, 343, 360, 409, 519
BspANI GGCC 4 cut(s) 135, 339, 426, 522
BspCNI CTCAG 3 cut(s) 43, 316, 323
BspFNI CGCG 1 cut(s) 411
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 1 cut(s) 102
BspMI ACCTGC 1 cut(s) 260
BspQI GCTCTTC 1 cut(s) 445
BsrBI CCGCTC 1 cut(s) 314
BssECI CCNNGG 4 cut(s) 136, 151, 172, 427
BssNI GRCGYC 1 cut(s) 217
BssSI CACGAG 1 cut(s) 420
BssT1I CCWWGG 1 cut(s) 136
Bst2BI CACGAG 1 cut(s) 420
Bst2UI CCWGG 2 cut(s) 153, 393
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 3 cut(s) 201, 408, 445
BstACI GRCGYC 1 cut(s) 217
BstC8I GCNNGC 2 cut(s) 221, 469
BstDEI CTNAG 4 cut(s) 51, 324, 331, 346
BstDSI CCRYGG 1 cut(s) 427
BstFNI CGCG 1 cut(s) 411
BstMAI GTCTC 2 cut(s) 10, 171
BstMCI CGRYCG 2 cut(s) 125, 523
BstMWI GCNNNNNNNGC 3 cut(s) 41, 216, 336
BstNI CCWGG 2 cut(s) 153, 393
BstSCI CCNGG 7 cut(s) 124, 151, 171, 172, 264, 391, 522
BstSLI GKGCMC 1 cut(s) 194
BstUI CGCG 1 cut(s) 411
BstV1I GCAGC 5 cut(s) 34, 56, 362, 458, 461
BstV2I GAAGAC 1 cut(s) 235
BstZI CGGCCG 1 cut(s) 520
BsuRI GGCC 4 cut(s) 135, 339, 426, 522
BtgI CCRYGG 1 cut(s) 427
BtsIMutI CAGTG 1 cut(s) 321
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 2 cut(s) 221, 469
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 1 cut(s) 496
Cfr13I GGNCC 3 cut(s) 88, 101, 133
Cfr9I CCCGGG 1 cut(s) 172
CseI GACGC 1 cut(s) 225
Csp6I GTAC 4 cut(s) 59, 84, 206, 437
CviAII CATG 4 cut(s) 92, 285, 464, 497
CviQI GTAC 4 cut(s) 59, 84, 206, 437
DdeI CTNAG 4 cut(s) 51, 324, 331, 346
EaeI YGGCCR 2 cut(s) 337, 520
EagI CGGCCG 1 cut(s) 520
Eam1104I CTCTTC 3 cut(s) 201, 408, 445
EarI CTCTTC 3 cut(s) 201, 408, 445
Ecl136II GAGCTC 1 cut(s) 455
EclXI CGGCCG 1 cut(s) 520
Eco130I CCWWGG 1 cut(s) 136
Eco24I GRGCYC 1 cut(s) 457
Eco47I GGWCC 2 cut(s) 88, 101
Eco52I CGGCCG 1 cut(s) 520
Eco53kI GAGCTC 1 cut(s) 455
Eco57I CTGAAG 3 cut(s) 126, 261, 469
Eco88I CYCGRG 1 cut(s) 172
EcoICRI GAGCTC 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 101
EcoRII CCWGG 2 cut(s) 151, 391
EcoT14I CCWWGG 1 cut(s) 136
EcoT38I GRGCYC 1 cut(s) 457
ErhI CCWWGG 1 cut(s) 136
Esp3I CGTCTC 1 cut(s) 171
FaeI CATG 4 cut(s) 95, 288, 467, 500
FaiI YATR 4 cut(s) 93, 286, 465, 498
FaqI GGGAC 2 cut(s) 114, 330
FatI CATG 4 cut(s) 91, 284, 463, 496
FauI CCCGC 3 cut(s) 17, 307, 416
Fnu4HI GCNGC 8 cut(s) 45, 48, 340, 343, 351, 472, 475, 520
FriOI GRGCYC 1 cut(s) 457
Fsp4HI GCNGC 8 cut(s) 45, 48, 340, 343, 351, 472, 475, 520
GluI GCNGC 8 cut(s) 45, 48, 340, 343, 351, 472, 475, 520
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 2 cut(s) 324, 414
HaeIII GGCC 4 cut(s) 135, 339, 426, 522
HapII CCGG 5 cut(s) 18, 125, 173, 265, 523
HgaI GACGC 1 cut(s) 225
Hin1I GRCGYC 1 cut(s) 217
Hin1II CATG 4 cut(s) 95, 288, 467, 500
HinfI GANTC 3 cut(s) 158, 177, 318
HpaII CCGG 5 cut(s) 18, 125, 173, 265, 523
HphI GGTGA 2 cut(s) 284, 384
Hpy188I TCNGA 2 cut(s) 241, 449
Hpy188III TCNNGA 1 cut(s) 497
HpyAV CCTTC 5 cut(s) 101, 236, 287, 374, 414
HpyCH4III ACNGT 1 cut(s) 88
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 216, 336
HpyF3I CTNAG 4 cut(s) 51, 324, 331, 346
Hsp92I GRCGYC 1 cut(s) 217
Hsp92II CATG 4 cut(s) 95, 288, 467, 500
LguI GCTCTTC 1 cut(s) 445
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 5 cut(s) 34, 56, 362, 458, 461
MbiI CCGCTC 1 cut(s) 314
MboII GAAGA 5 cut(s) 188, 240, 273, 425, 462
MhlI GDGCHC 2 cut(s) 194, 457
MlyI GAGTC 1 cut(s) 312
MslI CAYNNNNRTG 1 cut(s) 462
MspA1I CMGCKG 1 cut(s) 47
MspI CCGG 5 cut(s) 18, 125, 173, 265, 523
MspR9I CCNGG 7 cut(s) 126, 153, 173, 174, 266, 393, 524
MvaI CCWGG 2 cut(s) 153, 393
MvnI CGCG 1 cut(s) 411
MwoI GCNNNNNNNGC 3 cut(s) 41, 216, 336
NciI CCSGG 5 cut(s) 126, 173, 174, 266, 524
NlaIII CATG 4 cut(s) 95, 288, 467, 500
NlaIV GGNNCC 1 cut(s) 102
PagI TCATGA 1 cut(s) 496
PaqCI CACCTGC 1 cut(s) 260
PciSI GCTCTTC 1 cut(s) 445
PcsI WCGNNNNNNNCGW 1 cut(s) 67
PfeI GAWTC 2 cut(s) 158, 177
PkrI GCNGC 8 cut(s) 46, 49, 341, 344, 352, 473, 476, 521
PleI GAGTC 1 cut(s) 312
PpsI GAGTC 1 cut(s) 312
PpuMI RGGWCCY 1 cut(s) 101
Psp124BI GAGCTC 1 cut(s) 457
Psp5II RGGWCCY 1 cut(s) 101
Psp6I CCWGG 2 cut(s) 151, 391
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 2 cut(s) 151, 391
PspN4I GGNNCC 1 cut(s) 102
PspPI GGNCC 3 cut(s) 88, 101, 133
PspPPI RGGWCCY 1 cut(s) 101
PstNI CAGNNNCTG 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 47
RsaI GTAC 4 cut(s) 60, 85, 207, 438
RsaNI GTAC 4 cut(s) 59, 84, 206, 437
RseI CAYNNNNRTG 1 cut(s) 462
SacI GAGCTC 1 cut(s) 457
SapI GCTCTTC 1 cut(s) 445
SatI GCNGC 8 cut(s) 45, 48, 340, 343, 351, 472, 475, 520
Sau96I GGNCC 3 cut(s) 88, 101, 133
SchI GAGTC 1 cut(s) 312
ScrFI CCNGG 7 cut(s) 126, 153, 173, 174, 266, 393, 524
SduI GDGCHC 2 cut(s) 194, 457
SinI GGWCC 2 cut(s) 88, 101
SmaI CCCGGG 1 cut(s) 174
SmiMI CAYNNNNRTG 1 cut(s) 462
SmlI CTYRAG 1 cut(s) 366
SmoI CTYRAG 1 cut(s) 366
SsiI CCGC 7 cut(s) 10, 314, 340, 343, 360, 409, 519
SstI GAGCTC 1 cut(s) 457
StyD4I CCNGG 7 cut(s) 124, 151, 171, 172, 264, 391, 522
StyI CCWWGG 1 cut(s) 136
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 121
TatI WGTACW 1 cut(s) 436
TauI GCSGC 3 cut(s) 342, 345, 522
TfiI GAWTC 2 cut(s) 158, 177
TscAI CASTG 1 cut(s) 328
TseI GCWGC 5 cut(s) 44, 47, 350, 471, 474
TspDTI ATGAA 3 cut(s) 88, 273, 513
TspMI CCCGGG 1 cut(s) 172
TspRI CASTG 1 cut(s) 328
VpaK11BI GGWCC 2 cut(s) 88, 101
XmaI CCCGGG 1 cut(s) 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.