Rmu_sc0001529.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001529.1
OG0000087
Physical Location & Seq
Reverse (-)
21991 .. 23214
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001529.1_g000008.1.cds

Sequence Viewer

Length: 1161 bp
atgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtctatcgaagagacccttttggagataaccgatgagggatacggtgaacctgatcccgactctcctgtgacccacgccatgcaaccctccatggccgatgtcattacgatagctgacaccggggtgggaaaagtaccggcctcagtgcctatttcctctctttccactgggagcgatgaggcgttactccccagtgagaagaagagatcccacaagcaccggcatcaaaccgataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgggatcagggcggtcgccttctcctggcctgttatctcccgccgttccggtaatccccaagaatcccatcaagcagctgctgaatgaatacggggttgccgatgaaaagttcgtgcagtccatgcttggggatctgaaggatattgacctcgaccgggttcgagccaaagataatactccgcaggagaatcgccgtctcgctcgggaatcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctctgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggaggaggtaaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgaggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatctcgatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcggccaagtccggtgtcggtgggtctcagagtaccgcagaaggagcgggaggcggcggccaagtccggtgccggtgggtcccagagtactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

386

Amino Acids

42.43

Weight (kDa)

5.45

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 661
AatII GACGTC 1 cut(s) 42
Acc36I ACCTGC 1 cut(s) 661
AccB1I GGYRCC 1 cut(s) 1137
AccBSI CCGCTC 3 cut(s) 715, 1060, 1115
AccI GTMKAC 1 cut(s) 42
AccII CGCG 1 cut(s) 790
AclWI GGATC 5 cut(s) 116, 270, 382, 510, 885
AcoI YGGCCR 6 cut(s) 162, 322, 738, 999, 1071, 1126
AcsI RAATTY 1 cut(s) 1022
AcuI CTGAAG 2 cut(s) 527, 662
AcyI GRCGYC 2 cut(s) 39, 618
AfaI GTAC 8 cut(s) 204, 317, 340, 608, 917, 1007, 1102, 1157
AfiI CCNNNNNNNGG 9 cut(s) 377, 395, 498, 526, 849, 889, 894, 964, 1026
AgsI TTSAA 1 cut(s) 601
AhdI GACNNNNNGTC 1 cut(s) 49
AjnI CCWGG 4 cut(s) 12, 333, 394, 1038
AleI CACNNNNGTG 1 cut(s) 191
AluBI AGCT 5 cut(s) 182, 448, 703, 766, 934
AluI AGCT 5 cut(s) 182, 448, 703, 766, 934
Alw26I GTCTC 5 cut(s) 74, 572, 850, 1040, 1098
AlwI GGATC 5 cut(s) 116, 270, 382, 510, 885
AlwNI CAGNNNCTG 2 cut(s) 451, 839
Ama87I CYCGRG 4 cut(s) 370, 573, 810, 887
ApeKI GCWGC 6 cut(s) 445, 448, 751, 830, 950, 953
ApoI RAATTY 1 cut(s) 1022
AspA2I CCTAGG 1 cut(s) 46
AspLEI GCGC 1 cut(s) 790
AspS9I GGNCC 1 cut(s) 1147
AsuC2I CCSGG 8 cut(s) 190, 326, 371, 372, 527, 811, 812, 1003
AsuHPI GGTGA 5 cut(s) 125, 322, 359, 685, 785
AvaI CYCGRG 4 cut(s) 370, 573, 810, 887
AvaII GGWCC 1 cut(s) 1147
AvrII CCTAGG 1 cut(s) 46
BaeGI GKGCMC 1 cut(s) 595
BanI GGYRCC 1 cut(s) 1137
BauI CACGAG 2 cut(s) 61, 899
BbvCI CCTCAGC 1 cut(s) 783
BbvI GCAGC 6 cut(s) 435, 457, 763, 817, 937, 940
BccI CCATC 3 cut(s) 446, 620, 730
BceAI ACGGC 4 cut(s) 398, 549, 827, 890
BcgI CGANNNNNNTGC 2 cut(s) 542, 576
BciT130I CCWGG 4 cut(s) 14, 335, 396, 1040
BciVI GTATCC 1 cut(s) 101
BcnI CCSGG 8 cut(s) 190, 326, 371, 372, 527, 811, 812, 1003
BcoDI GTCTC 5 cut(s) 74, 572, 850, 1040, 1098
BfaI CTAG 1 cut(s) 47
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 661
BfuI GTATCC 1 cut(s) 101
BlnI CCTAGG 1 cut(s) 46
BmcAI AGTACT 1 cut(s) 1157
Bme18I GGWCC 1 cut(s) 1147
BmeRI GACNNNNNGTC 1 cut(s) 49
BmeT110I CYCGRG 4 cut(s) 370, 573, 810, 887
BmgT120I GGNCC 1 cut(s) 1147
BmiI GGNNCC 3 cut(s) 1139, 1148, 1149
BmrI ACTGGG 2 cut(s) 246, 255
BmsI GCATC 4 cut(s) 13, 301, 576, 933
BmuI ACTGGG 2 cut(s) 246, 255
BplI GAGNNNNNCTC 4 cut(s) 704, 736, 923, 955
BpmI CTGGAG 3 cut(s) 725, 893, 1061
Bpu10I CCTNAGC 1 cut(s) 783
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 8 cut(s) 190, 326, 371, 372, 527, 811, 812, 1003
BsaBI GATNNNNATC 1 cut(s) 636
BsaHI GRCGYC 2 cut(s) 39, 618
BsaI GGTCTC 3 cut(s) 74, 1040, 1098
BsaJI CCNNGG 9 cut(s) 13, 46, 159, 189, 334, 370, 810, 888, 906
BsaWI WCCGGW 3 cut(s) 418, 1079, 1134
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 905, 935
Bsc4I CCNNNNNNNGG 9 cut(s) 377, 395, 498, 526, 849, 889, 894, 964, 1026
Bse118I RCCGGY 3 cut(s) 205, 288, 1140
Bse1I ACTGG 4 cut(s) 241, 261, 325, 346
Bse8I GATNNNNATC 1 cut(s) 636
BseBI CCWGG 4 cut(s) 14, 335, 396, 1040
BseDI CCNNGG 9 cut(s) 13, 46, 159, 189, 334, 370, 810, 888, 906
BseGI GGATG 1 cut(s) 334
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 9 cut(s) 377, 395, 498, 526, 849, 889, 894, 964, 1026
BseMII CTCAG 5 cut(s) 225, 723, 774, 939, 1109
BseNI ACTGG 4 cut(s) 241, 261, 325, 346
BseRI GAGGAG 4 cut(s) 662, 809, 905, 926
BseSI GKGCMC 1 cut(s) 595
BseX3I CGGCCG 1 cut(s) 999
BseXI GCAGC 6 cut(s) 435, 457, 763, 817, 937, 940
BsgI GTGCAG 2 cut(s) 14, 506
Bsh1236I CGCG 1 cut(s) 790
Bsh1285I CGRYCG 3 cut(s) 386, 526, 1002
BshNI GGYRCC 1 cut(s) 1137
BsiEI CGRYCG 3 cut(s) 386, 526, 1002
BsiHKCI CYCGRG 4 cut(s) 370, 573, 810, 887
BslFI GGGAC 3 cut(s) 731, 827, 1133
BslI CCNNNNNNNGG 9 cut(s) 377, 395, 498, 526, 849, 889, 894, 964, 1026
BsmAI GTCTC 5 cut(s) 74, 572, 850, 1040, 1098
BsmBI CGTCTC 2 cut(s) 572, 850
BsmFI GGGAC 3 cut(s) 731, 827, 1133
Bso31I GGTCTC 3 cut(s) 74, 1040, 1098
BsoBI CYCGRG 4 cut(s) 370, 573, 810, 887
Bsp1286I GDGCHC 1 cut(s) 595
Bsp143I GATC 6 cut(s) 121, 275, 364, 374, 502, 877
Bsp19I CCATGG 1 cut(s) 159
BspCNI CTCAG 5 cut(s) 224, 724, 775, 938, 1108
BspFNI CGCG 1 cut(s) 790
BspHI TCATGA 1 cut(s) 975
BspLI GGNNCC 3 cut(s) 1139, 1148, 1149
BspMAI CTGCAG 1 cut(s) 835
BspMI ACCTGC 1 cut(s) 661
BspPI GGATC 5 cut(s) 116, 270, 382, 510, 885
BspT107I GGYRCC 1 cut(s) 1137
BspTNI GGTCTC 3 cut(s) 74, 1040, 1098
BsrBI CCGCTC 3 cut(s) 715, 1060, 1115
BsrFI RCCGGY 3 cut(s) 205, 288, 1140
BsrI ACTGG 4 cut(s) 241, 261, 325, 346
BssAI RCCGGY 3 cut(s) 205, 288, 1140
BssECI CCNNGG 9 cut(s) 13, 46, 159, 189, 334, 370, 810, 888, 906
BssMI GATC 6 cut(s) 121, 275, 364, 374, 502, 877
BssNI GRCGYC 2 cut(s) 39, 618
BssSI CACGAG 2 cut(s) 61, 899
BssT1I CCWWGG 2 cut(s) 46, 159
Bst2BI CACGAG 2 cut(s) 61, 899
Bst2UI CCWGG 4 cut(s) 14, 335, 396, 1040
Bst4CI ACNGT 1 cut(s) 113
Bst6I CTCTTC 4 cut(s) 72, 266, 344, 602
BstACI GRCGYC 2 cut(s) 39, 618
BstAPI GCANNNNNTGC 2 cut(s) 493, 839
BstC8I GCNNGC 3 cut(s) 591, 622, 948
BstDEI CTNAG 7 cut(s) 211, 732, 747, 783, 925, 1009, 1095
BstDSI CCRYGG 2 cut(s) 159, 906
BstENI CCTNNNNNAGG 1 cut(s) 887
BstF5I GGATG 1 cut(s) 334
BstFNI CGCG 1 cut(s) 790
BstHHI GCGC 1 cut(s) 790
BstKTI GATC 6 cut(s) 124, 278, 367, 377, 505, 880
BstMAI GTCTC 5 cut(s) 74, 572, 850, 1040, 1098
BstMBI GATC 6 cut(s) 121, 275, 364, 374, 502, 877
BstMCI CGRYCG 3 cut(s) 386, 526, 1002
BstMWI GCNNNNNNNGC 5 cut(s) 493, 617, 737, 839, 1112
BstNI CCWGG 4 cut(s) 14, 335, 396, 1040
BstSFI CTRYAG 1 cut(s) 831
BstSLI GKGCMC 1 cut(s) 595
BstUI CGCG 1 cut(s) 790
BstV1I GCAGC 6 cut(s) 435, 457, 763, 817, 937, 940
BstX2I RGATCY 2 cut(s) 275, 502
BstXI CCANNNNNNTGG 1 cut(s) 341
BstYI RGATCY 2 cut(s) 275, 502
BstZI CGGCCG 1 cut(s) 999
BsuI GTATCC 1 cut(s) 101
BtgI CCRYGG 2 cut(s) 159, 906
BtgZI GCGATG 1 cut(s) 258
BtsCI GGATG 1 cut(s) 334
BtsIMutI CAGTG 4 cut(s) 219, 234, 268, 318
BveI ACCTGC 1 cut(s) 661
Cac8I GCNNGC 3 cut(s) 591, 622, 948
CaiI CAGNNNCTG 2 cut(s) 451, 839
CciI TCATGA 1 cut(s) 975
CfoI GCGC 1 cut(s) 790
Cfr10I RCCGGY 3 cut(s) 205, 288, 1140
Cfr13I GGNCC 1 cut(s) 1147
Cfr9I CCCGGG 2 cut(s) 370, 810
CseI GACGC 1 cut(s) 626
Csp6I GTAC 8 cut(s) 203, 316, 339, 607, 916, 1006, 1101, 1156
CviAII CATG 6 cut(s) 148, 160, 493, 686, 849, 976
CviQI GTAC 8 cut(s) 203, 316, 339, 607, 916, 1006, 1101, 1156
DdeI CTNAG 7 cut(s) 211, 732, 747, 783, 925, 1009, 1095
DpnI GATC 6 cut(s) 123, 277, 366, 376, 504, 879
DpnII GATC 6 cut(s) 121, 275, 364, 374, 502, 877
DriI GACNNNNNGTC 1 cut(s) 49
EaeI YGGCCR 6 cut(s) 162, 322, 738, 999, 1071, 1126
EagI CGGCCG 1 cut(s) 999
Eam1104I CTCTTC 4 cut(s) 72, 266, 344, 602
Eam1105I GACNNNNNGTC 1 cut(s) 49
EarI CTCTTC 4 cut(s) 72, 266, 344, 602
EclXI CGGCCG 1 cut(s) 999
Eco130I CCWWGG 2 cut(s) 46, 159
Eco31I GGTCTC 3 cut(s) 74, 1040, 1098
Eco47I GGWCC 1 cut(s) 1147
Eco52I CGGCCG 1 cut(s) 999
Eco57I CTGAAG 2 cut(s) 527, 662
Eco88I CYCGRG 4 cut(s) 370, 573, 810, 887
EcoNI CCTNNNNNAGG 1 cut(s) 887
EcoO109I RGGNCCY 1 cut(s) 1147
EcoRII CCWGG 4 cut(s) 12, 333, 394, 1038
EcoT14I CCWWGG 2 cut(s) 46, 159
ErhI CCWWGG 2 cut(s) 46, 159
Esp3I CGTCTC 2 cut(s) 572, 850
FaeI CATG 6 cut(s) 151, 163, 496, 689, 852, 979
FaiI YATR 6 cut(s) 149, 161, 494, 687, 850, 977
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FaqI GGGAC 3 cut(s) 731, 827, 1133
FatI CATG 6 cut(s) 147, 159, 492, 685, 848, 975
FauI CCCGC 7 cut(s) 418, 582, 708, 783, 1023, 1053, 1108
FblI GTMKAC 1 cut(s) 42
FokI GGATG 1 cut(s) 341
FspBI CTAG 1 cut(s) 47
GlaI GCGC 1 cut(s) 789
GsuI CTGGAG 3 cut(s) 725, 893, 1061
HgaI GACGC 1 cut(s) 626
HhaI GCGC 1 cut(s) 790
Hin1I GRCGYC 2 cut(s) 39, 618
Hin1II CATG 6 cut(s) 151, 163, 496, 689, 852, 979
Hin6I GCGC 1 cut(s) 788
HinP1I GCGC 1 cut(s) 788
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HinfI GANTC 9 cut(s) 64, 128, 433, 559, 578, 719, 815, 836, 866
HphI GGTGA 5 cut(s) 125, 322, 359, 685, 785
Hpy166II GTNNAC 4 cut(s) 43, 116, 318, 607
Hpy188I TCNGA 5 cut(s) 507, 642, 820, 928, 1098
Hpy188III TCNNGA 6 cut(s) 125, 575, 872, 887, 940, 976
Hpy8I GTNNAC 4 cut(s) 43, 116, 318, 607
Hpy99I CGWCG 3 cut(s) 41, 44, 620
HpyCH4III ACNGT 1 cut(s) 113
HpyCH4IV ACGT 2 cut(s) 39, 314
HpyCH4V TGCA 4 cut(s) 31, 151, 487, 833
HpyF10VI GCNNNNNNNGC 5 cut(s) 493, 617, 737, 839, 1112
HpyF3I CTNAG 7 cut(s) 211, 732, 747, 783, 925, 1009, 1095
HpySE526I ACGT 2 cut(s) 39, 314
Hsp92I GRCGYC 2 cut(s) 39, 618
Hsp92II CATG 6 cut(s) 151, 163, 496, 689, 852, 979
HspAI GCGC 1 cut(s) 788
KflI GGGWCCC 1 cut(s) 1147
Kzo9I GATC 6 cut(s) 121, 275, 364, 374, 502, 877
LmnI GCTCC 5 cut(s) 240, 712, 763, 1057, 1112
Lsp1109I GCAGC 6 cut(s) 435, 457, 763, 817, 937, 940
LweI GCATC 4 cut(s) 13, 301, 576, 933
MaeI CTAG 1 cut(s) 47
MaeII ACGT 2 cut(s) 39, 314
MaeIII GTNAC 3 cut(s) 136, 252, 310
MalI GATC 6 cut(s) 123, 277, 366, 376, 504, 879
MbiI CCGCTC 3 cut(s) 715, 1060, 1115
MboI GATC 6 cut(s) 121, 275, 364, 374, 502, 877
MflI RGATCY 2 cut(s) 275, 502
MhlI GDGCHC 1 cut(s) 595
MluCI AATT 1 cut(s) 1022
MlyI GAGTC 6 cut(s) 73, 122, 713, 809, 845, 860
MseI TTAA 1 cut(s) 984
MslI CAYNNNNRTG 1 cut(s) 191
MspA1I CMGCKG 2 cut(s) 448, 754
MvaI CCWGG 4 cut(s) 14, 335, 396, 1040
MvnI CGCG 1 cut(s) 790
MwoI GCNNNNNNNGC 5 cut(s) 493, 617, 737, 839, 1112
NciI CCSGG 8 cut(s) 190, 326, 371, 372, 527, 811, 812, 1003
NcoI CCATGG 1 cut(s) 159
NdeII GATC 6 cut(s) 121, 275, 364, 374, 502, 877
NlaIII CATG 6 cut(s) 151, 163, 496, 689, 852, 979
NlaIV GGNNCC 3 cut(s) 1139, 1148, 1149
NmuCI GTSAC 2 cut(s) 136, 310
OliI CACNNNNGTG 1 cut(s) 191
PagI TCATGA 1 cut(s) 975
PaqCI CACCTGC 1 cut(s) 661
PcsI WCGNNNNNNNCGW 3 cut(s) 59, 468, 621
PfeI GAWTC 3 cut(s) 433, 559, 578
PfoI TCCNGGA 1 cut(s) 1038
PleI GAGTC 6 cut(s) 72, 122, 713, 809, 844, 860
PpsI GAGTC 6 cut(s) 72, 122, 713, 809, 844, 860
PpuMI RGGWCCY 1 cut(s) 1147
Psp5II RGGWCCY 1 cut(s) 1147
Psp6I CCWGG 4 cut(s) 12, 333, 394, 1038
PspGI CCWGG 4 cut(s) 12, 333, 394, 1038
PspN4I GGNNCC 3 cut(s) 1139, 1148, 1149
PspPI GGNCC 1 cut(s) 1147
PspPPI RGGWCCY 1 cut(s) 1147
PstI CTGCAG 1 cut(s) 835
PstNI CAGNNNCTG 2 cut(s) 451, 839
PsuI RGATCY 2 cut(s) 275, 502
PvuII CAGCTG 1 cut(s) 448
RsaI GTAC 8 cut(s) 204, 317, 340, 608, 917, 1007, 1102, 1157
RsaNI GTAC 8 cut(s) 203, 316, 339, 607, 916, 1006, 1101, 1156
RseI CAYNNNNRTG 1 cut(s) 191
SalI GTCGAC 1 cut(s) 41
SaqAI TTAA 1 cut(s) 984
Sau3AI GATC 6 cut(s) 121, 275, 364, 374, 502, 877
Sau96I GGNCC 1 cut(s) 1147
ScaI AGTACT 1 cut(s) 1157
SchI GAGTC 6 cut(s) 73, 122, 713, 809, 845, 860
SduI GDGCHC 1 cut(s) 595
SfaNI GCATC 4 cut(s) 13, 301, 576, 933
SfcI CTRYAG 1 cut(s) 831
SinI GGWCC 1 cut(s) 1147
SmaI CCCGGG 2 cut(s) 372, 812
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 767
SmoI CTYRAG 1 cut(s) 767
Sse9I AATT 1 cut(s) 1022
SspMI CTAG 1 cut(s) 47
StyI CCWWGG 2 cut(s) 46, 159
TaaI ACNGT 1 cut(s) 113
TaiI ACGT 2 cut(s) 42, 317
TaqI TCGA 8 cut(s) 36, 42, 53, 75, 522, 532, 615, 941
TaqII GACCGA 1 cut(s) 57
TasI AATT 1 cut(s) 1022
TatI WGTACW 2 cut(s) 915, 1155
TauI GCSGC 6 cut(s) 743, 1001, 1070, 1073, 1125, 1128
TfiI GAWTC 3 cut(s) 433, 559, 578
Tru1I TTAA 1 cut(s) 984
Tru9I TTAA 1 cut(s) 984
TscAI CASTG 4 cut(s) 219, 241, 268, 325
TseFI GTSAC 2 cut(s) 136, 310
TseI GCWGC 6 cut(s) 445, 448, 751, 830, 950, 953
Tsp45I GTSAC 2 cut(s) 136, 310
TspDTI ATGAA 5 cut(s) 471, 489, 674, 992, 1029
TspMI CCCGGG 2 cut(s) 370, 810
TspRI CASTG 4 cut(s) 219, 241, 268, 325
VpaK11BI GGWCC 1 cut(s) 1147
XagI CCTNNNNNAGG 1 cut(s) 887
XapI RAATTY 1 cut(s) 1022
XmaI CCCGGG 2 cut(s) 370, 810
XmaJI CCTAGG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 42
XspI CTAG 1 cut(s) 47
ZraI GACGTC 1 cut(s) 40
ZrmI AGTACT 1 cut(s) 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.