Rmu_sc0010048.1_g000009

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010048.1
OG0000087
Physical Location & Seq
Forward (+)
41842 .. 50401
8560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010048.1_g000009.1.cds

Sequence Viewer

Length: 2112 bp
atgcattggagattgaatttaagagggaaaccgactgttttccctcactttcgcaaaaaagaagcgcaggagacttggaaggtttgcagcgaagagaaagggagaaccaagggagaagtgatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcctctgccaggcaagctgaagtggatatcgaccggtacttaggccgggtggatcaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatccgcggaggccccggtagtcacagtggccattcccgagggcattccgaatccgaggtacacacttgcggatgggaccatatgcgacgaacctgggagaaacatgaggggtggggatattggatcgtcgtaccagtcctctgccaggcaagctgaagtggatatcgaccggtacttaggccgggtggatcaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatccgcggaggccccggtagtcacagtggccattcccgagggcattccgaatccgaggtacacacttgcggatgggaccatatgcgacgaacctgggagaaacatgacgatgaaggagatcatcgacatgcgacttaagtgggggataccggacgcagtggagcttaggcctcttagggatggggagatggccgcgaatcctgcctcggggtgggtggcgctgcacgagaatcagctcctcctccgagagcttaggcctcttagggatggggagatggccgcgaatcctgcctcggggtgggtggcgctgcacgagaatcagctcctccaagggttgtcgctaccactgccccggtgcctacagtatctgctacggatgctgaacctgtccccggggcagctgaccccgaatgccgttcgccaaatatacagtatgatggctatgtgggacttgtgccaacaagggtggccctccataaacgagttcctcgcgatacatcgggtactgtactctaggaagcagtcttgtgcgggtacggttacctttgccgctagggattacgagctgctagttaccgacatgcctacctcgatgagcaaaacgtggaggaacaaagtgttcctagctggggggcagtggcagataaaaaataagaagtggcagctgaccggtactttccaagctatcggggaccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatatgccgtgtggtcagacgtggaggaacaaatgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctaatgggccagggagaagacgccctgcacatcgacgtcgacctagggtcgaaagtgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccagagagaaggcgccctgcacatcgacgtcgacctagggtcgaaaggtacgagtcggtcaattgaagaaacccttctggagatcaccgatgagggatacggtgaacctgatcccgacgctcccgtgacccacgtcacgcagccctctatggccgatgttattacaatagataacaccggaataggaaaagtaccggccccagtgcctatttcctctcgttccactaggagagatgagtcattactccccggtgagaagaagagatcccacaggcaccggcataggactgataaggaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcaaaagaaagatcacccgagatcagagtcgttgccttcttttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgaggacgagatagtcttgtatgaagcgttcaggattgtgaacacctcatacctgggtggtggtggtgtccttgggccctgctgtgccctcggttccctgttagggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

703

Amino Acids

77.59

Weight (kDa)

5.38

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2015
AatII GACGTC 2 cut(s) 1461, 1590
AccB1I GGYRCC 3 cut(s) 930, 1571, 1833
AccB7I CCANNNNNTGG 2 cut(s) 1414, 1543
AccI GTMKAC 2 cut(s) 1461, 1590
AccII CGCG 5 cut(s) 308, 581, 770, 857, 1067
AcoI YGGCCR 6 cut(s) 330, 603, 765, 852, 1710, 1870
AcsI RAATTY 1 cut(s) 16
AcuI CTGAAG 2 cut(s) 204, 477
AcyI GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
AflII CTTAAG 1 cut(s) 710
AgeI ACCGGT 3 cut(s) 198, 471, 1244
AgsI TTSAA 2 cut(s) 16, 1625
AhdI GACNNNNNGTC 2 cut(s) 1468, 1597
AjiI CACGTC 2 cut(s) 1336, 1693
AjnI CCWGG 7 cut(s) 134, 173, 394, 446, 667, 1431, 2055
AloI GAACNNNNNNTCC 4 cut(s) 224, 256, 497, 529
Alw26I GTCTC 1 cut(s) 65
AlwNI CAGNNNCTG 2 cut(s) 943, 1999
Ama87I CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
ApaI GGGCCC 1 cut(s) 2082
ApeKI GCWGC 9 cut(s) 87, 796, 883, 973, 1141, 1237, 1699, 1993, 1996
ApoI RAATTY 1 cut(s) 16
AsiGI ACCGGT 3 cut(s) 198, 471, 1244
Asp700I GAANNNNTTC 1 cut(s) 1632
AspA2I CCTAGG 2 cut(s) 1465, 1594
AspLEI GCGC 6 cut(s) 67, 796, 883, 1357, 1486, 1574
AsuHPI GGTGA 7 cut(s) 299, 572, 1636, 1673, 1823, 1870, 1907
AvaI CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
AvaII GGWCC 5 cut(s) 240, 378, 513, 651, 1267
AvrII CCTAGG 2 cut(s) 1465, 1594
BaeGI GKGCMC 2 cut(s) 2082, 2092
BalI TGGCCA 2 cut(s) 332, 605
BamHI GGATCC 2 cut(s) 302, 575
BanI GGYRCC 3 cut(s) 930, 1571, 1833
BanII GRGCYC 1 cut(s) 2082
BauI CACGAG 2 cut(s) 800, 887
BbsI GAAGAC 1 cut(s) 1446
BbvI GCAGC 9 cut(s) 99, 783, 870, 985, 1128, 1249, 1711, 1983, 2005
BceAI ACGGC 2 cut(s) 974, 1307
BciT130I CCWGG 7 cut(s) 136, 175, 396, 448, 669, 1433, 2057
BciVI GTATCC 3 cut(s) 139, 714, 1649
BcoDI GTCTC 1 cut(s) 65
BfaI CTAG 7 cut(s) 1089, 1128, 1145, 1199, 1466, 1595, 1785
BfmI CTRYAG 1 cut(s) 935
BfoI RGCGCY 5 cut(s) 797, 884, 1358, 1487, 1575
BfrI CTTAAG 1 cut(s) 710
BfuI GTATCC 3 cut(s) 139, 714, 1649
BlnI CCTAGG 2 cut(s) 1465, 1594
Bme18I GGWCC 5 cut(s) 240, 378, 513, 651, 1267
BmeRI GACNNNNNGTC 2 cut(s) 1468, 1597
BmeT110I CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
BmgBI CACGTC 2 cut(s) 1336, 1693
BmrI ACTGGG 3 cut(s) 258, 531, 1754
BmsI GCATC 3 cut(s) 942, 1393, 1522
BmuI ACTGGG 3 cut(s) 258, 531, 1754
BoxI GACNNNNGTC 1 cut(s) 1691
BpiI GAAGAC 1 cut(s) 1446
BpmI CTGGAG 1 cut(s) 1658
Bpu10I CCTNAGC 2 cut(s) 740, 827
BsaHI GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
BsaWI WCCGGW 6 cut(s) 198, 471, 724, 1244, 1736, 1966
BsaXI ACNNNNNCTCC 2 cut(s) 1847, 1877
Bse118I RCCGGY 5 cut(s) 198, 471, 1244, 1753, 1836
Bse1I ACTGG 8 cut(s) 163, 253, 436, 526, 1270, 1760, 1873, 1894
BseBI CCWGG 7 cut(s) 136, 175, 396, 448, 669, 1433, 2057
BseMII CTCAG 1 cut(s) 1991
BseNI ACTGG 8 cut(s) 163, 253, 436, 526, 1270, 1760, 1873, 1894
BseRI GAGGAG 7 cut(s) 287, 560, 803, 806, 890, 1400, 1529
BseSI GKGCMC 2 cut(s) 2082, 2092
BseXI GCAGC 9 cut(s) 99, 783, 870, 985, 1128, 1249, 1711, 1983, 2005
BseYI CCCAGC 1 cut(s) 1202
BsgI GTGCAG 4 cut(s) 782, 869, 1433, 1562
Bsh1236I CGCG 5 cut(s) 308, 581, 770, 857, 1067
Bsh1285I CGRYCG 2 cut(s) 199, 472
BshNI GGYRCC 3 cut(s) 930, 1571, 1833
BshTI ACCGGT 3 cut(s) 198, 471, 1244
BsiEI CGRYCG 2 cut(s) 199, 472
BsiHKCI CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
BslFI GGGAC 5 cut(s) 391, 664, 949, 1037, 1280
BsmAI GTCTC 1 cut(s) 65
BsmFI GGGAC 5 cut(s) 391, 664, 949, 1037, 1280
BsmI GAATGC 3 cut(s) 345, 618, 991
BsoBI CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
Bsp120I GGGCCC 1 cut(s) 2078
Bsp1286I GDGCHC 2 cut(s) 2082, 2092
Bsp68I TCGCGA 1 cut(s) 1067
BspCNI CTCAG 1 cut(s) 1992
BspFNI CGCG 5 cut(s) 308, 581, 770, 857, 1067
BspT107I GGYRCC 3 cut(s) 930, 1571, 1833
BspTI CTTAAG 1 cut(s) 710
BsrFI RCCGGY 5 cut(s) 198, 471, 1244, 1753, 1836
BsrI ACTGG 8 cut(s) 163, 253, 436, 526, 1270, 1760, 1873, 1894
BssAI RCCGGY 5 cut(s) 198, 471, 1244, 1753, 1836
BssNI GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
BssSI CACGAG 2 cut(s) 800, 887
BssT1I CCWWGG 6 cut(s) 108, 904, 1465, 1594, 1882, 2074
Bst2BI CACGAG 2 cut(s) 800, 887
Bst2UI CCWGG 7 cut(s) 136, 175, 396, 448, 669, 1433, 2057
Bst4CI ACNGT 8 cut(s) 37, 328, 601, 939, 1007, 1083, 1114, 1661
Bst6I CTCTTC 6 cut(s) 87, 1295, 1355, 1484, 1814, 1892
BstACI GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
BstAFI CTTAAG 1 cut(s) 710
BstC8I GCNNGC 2 cut(s) 180, 453
BstDEI CTNAG 7 cut(s) 205, 478, 740, 749, 827, 836, 2000
BstDSI CCRYGG 2 cut(s) 306, 579
BstEII GGTNACC 1 cut(s) 1114
BstENI CCTNNNNNAGG 2 cut(s) 172, 445
BstFNI CGCG 5 cut(s) 308, 581, 770, 857, 1067
BstH2I RGCGCY 5 cut(s) 797, 884, 1358, 1487, 1575
BstHHI GCGC 6 cut(s) 67, 796, 883, 1357, 1486, 1574
BstMAI GTCTC 1 cut(s) 65
BstMCI CGRYCG 2 cut(s) 199, 472
BstMWI GCNNNNNNNGC 7 cut(s) 179, 452, 776, 863, 922, 952, 1990
BstNI CCWGG 7 cut(s) 136, 175, 396, 448, 669, 1433, 2057
BstNSI RCATGY 4 cut(s) 706, 1159, 1423, 1552
BstPAI GACNNNNGTC 1 cut(s) 1691
BstPI GGTNACC 1 cut(s) 1114
BstSFI CTRYAG 1 cut(s) 935
BstSLI GKGCMC 2 cut(s) 2082, 2092
BstUI CGCG 5 cut(s) 308, 581, 770, 857, 1067
BstV1I GCAGC 9 cut(s) 99, 783, 870, 985, 1128, 1249, 1711, 1983, 2005
BstV2I GAAGAC 1 cut(s) 1446
BstX2I RGATCY 3 cut(s) 302, 575, 1823
BstXI CCANNNNNNTGG 1 cut(s) 1889
BstYI RGATCY 3 cut(s) 302, 575, 1823
BsuI GTATCC 3 cut(s) 139, 714, 1649
BtgI CCRYGG 2 cut(s) 306, 579
BtrI CACGTC 2 cut(s) 1336, 1693
BtsI GCAGTG 3 cut(s) 738, 920, 1217
BtsIMutI CAGTG 7 cut(s) 333, 606, 738, 920, 1217, 1767, 1866
BtuMI TCGCGA 1 cut(s) 1067
Cac8I GCNNGC 2 cut(s) 180, 453
CaiI CAGNNNCTG 2 cut(s) 943, 1999
CfoI GCGC 6 cut(s) 67, 796, 883, 1357, 1486, 1574
Cfr10I RCCGGY 5 cut(s) 198, 471, 1244, 1753, 1836
Cfr42I CCGCGG 2 cut(s) 309, 582
Cfr9I CCCGGG 2 cut(s) 967, 1311
CseI GACGC 3 cut(s) 737, 1451, 1685
CspAI ACCGGT 3 cut(s) 198, 471, 1244
CspCI CAANNNNNGTGG 2 cut(s) 1022, 1057
CviAII CATG 6 cut(s) 406, 679, 703, 1156, 1420, 1549
DdeI CTNAG 7 cut(s) 205, 478, 740, 749, 827, 836, 2000
DinI GGCGCC 1 cut(s) 1573
DrdI GACNNNNNNGTC 1 cut(s) 2015
DriI GACNNNNNGTC 2 cut(s) 1468, 1597
DseDI GACNNNNNNGTC 1 cut(s) 2015
EaeI YGGCCR 6 cut(s) 330, 603, 765, 852, 1710, 1870
Eam1104I CTCTTC 6 cut(s) 87, 1295, 1355, 1484, 1814, 1892
Eam1105I GACNNNNNGTC 2 cut(s) 1468, 1597
EarI CTCTTC 6 cut(s) 87, 1295, 1355, 1484, 1814, 1892
Eco130I CCWWGG 6 cut(s) 108, 904, 1465, 1594, 1882, 2074
Eco147I AGGCCT 2 cut(s) 745, 832
Eco24I GRGCYC 1 cut(s) 2082
Eco32I GATATC 2 cut(s) 193, 466
Eco47I GGWCC 5 cut(s) 240, 378, 513, 651, 1267
Eco57I CTGAAG 2 cut(s) 204, 477
Eco88I CYCGRG 7 cut(s) 338, 611, 781, 868, 967, 1311, 1918
Eco91I GGTNACC 1 cut(s) 1114
EcoNI CCTNNNNNAGG 2 cut(s) 172, 445
EcoO109I RGGNCCY 5 cut(s) 240, 313, 513, 586, 2079
EcoO65I GGTNACC 1 cut(s) 1114
EcoRII CCWGG 7 cut(s) 134, 173, 394, 446, 667, 1431, 2055
EcoRV GATATC 2 cut(s) 193, 466
EcoT14I CCWWGG 6 cut(s) 108, 904, 1465, 1594, 1882, 2074
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 2082
EgeI GGCGCC 1 cut(s) 1573
EheI GGCGCC 1 cut(s) 1573
ErhI CCWWGG 6 cut(s) 108, 904, 1465, 1594, 1882, 2074
FaeI CATG 6 cut(s) 409, 682, 706, 1159, 1423, 1552
FalI AAGNNNNNCTT 2 cut(s) 1617, 1649
FaqI GGGAC 5 cut(s) 391, 664, 949, 1037, 1280
FatI CATG 6 cut(s) 405, 678, 702, 1155, 1419, 1548
FauI CCCGC 2 cut(s) 1099, 1966
FauNDI CATATG 2 cut(s) 383, 656
FblI GTMKAC 2 cut(s) 1461, 1590
FriOI GRGCYC 1 cut(s) 2082
FspBI CTAG 7 cut(s) 1089, 1128, 1145, 1199, 1466, 1595, 1785
GlaI GCGC 6 cut(s) 66, 795, 882, 1356, 1485, 1573
GsaI CCCAGC 1 cut(s) 1206
GsuI CTGGAG 1 cut(s) 1658
HaeII RGCGCY 5 cut(s) 797, 884, 1358, 1487, 1575
HgaI GACGC 3 cut(s) 737, 1451, 1685
HhaI GCGC 6 cut(s) 67, 796, 883, 1357, 1486, 1574
Hin1I GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
Hin1II CATG 6 cut(s) 409, 682, 706, 1159, 1423, 1552
Hin6I GCGC 6 cut(s) 65, 794, 881, 1355, 1484, 1572
HinP1I GCGC 6 cut(s) 65, 794, 881, 1355, 1484, 1572
HincII GTYRAC 2 cut(s) 1462, 1591
HindII GTYRAC 2 cut(s) 1462, 1591
HphI GGTGA 7 cut(s) 299, 572, 1636, 1673, 1823, 1870, 1907
Hpy166II GTNNAC 7 cut(s) 363, 636, 1462, 1591, 1664, 1866, 2044
Hpy188III TCNNGA 6 cut(s) 338, 611, 1066, 1637, 1673, 2035
Hpy8I GTNNAC 7 cut(s) 363, 636, 1462, 1591, 1664, 1866, 2044
HpyAV CCTTC 5 cut(s) 73, 682, 1562, 1643, 1947
HpyCH4III ACNGT 8 cut(s) 37, 328, 601, 939, 1007, 1083, 1114, 1661
HpyCH4IV ACGT 6 cut(s) 1178, 1335, 1458, 1587, 1692, 1862
HpyCH4V TGCA 6 cut(s) 4, 87, 799, 886, 1450, 1579
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 452, 776, 863, 922, 952, 1990
HpyF3I CTNAG 7 cut(s) 205, 478, 740, 749, 827, 836, 2000
HpySE526I ACGT 6 cut(s) 1178, 1335, 1458, 1587, 1692, 1862
Hsp92I GRCGYC 4 cut(s) 1443, 1458, 1572, 1587
Hsp92II CATG 6 cut(s) 409, 682, 706, 1159, 1423, 1552
HspAI GCGC 6 cut(s) 65, 794, 881, 1355, 1484, 1572
KasI GGCGCC 1 cut(s) 1571
KspI CCGCGG 2 cut(s) 309, 582
LmnI GCTCC 4 cut(s) 736, 816, 903, 1684
Lsp1109I GCAGC 9 cut(s) 99, 783, 870, 985, 1128, 1249, 1711, 1983, 2005
LweI GCATC 3 cut(s) 942, 1393, 1522
MaeI CTAG 7 cut(s) 1089, 1128, 1145, 1199, 1466, 1595, 1785
MaeII ACGT 6 cut(s) 1178, 1335, 1458, 1587, 1692, 1862
MaeIII GTNAC 7 cut(s) 322, 595, 1114, 1147, 1684, 1693, 1858
MboII GAAGA 9 cut(s) 104, 1312, 1372, 1451, 1501, 1637, 1828, 1831, 1909
MfeI CAATTG 1 cut(s) 1620
MflI RGATCY 3 cut(s) 302, 575, 1823
MhlI GDGCHC 2 cut(s) 2082, 2092
MlsI TGGCCA 2 cut(s) 332, 605
MluCI AATT 4 cut(s) 16, 221, 494, 1620
MluNI TGGCCA 2 cut(s) 332, 605
Mly113I GGCGCC 1 cut(s) 1572
MlyI GAGTC 5 cut(s) 284, 557, 1621, 1805, 1937
MmeI TCCRAC 2 cut(s) 303, 576
Mox20I TGGCCA 2 cut(s) 332, 605
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 1632
MscI TGGCCA 2 cut(s) 332, 605
MseI TTAA 2 cut(s) 20, 711
MslI CAYNNNNRTG 4 cut(s) 683, 701, 1424, 1553
Msp20I TGGCCA 2 cut(s) 332, 605
MspA1I CMGCKG 5 cut(s) 308, 581, 976, 1240, 1996
MspCI CTTAAG 1 cut(s) 710
MunI CAATTG 1 cut(s) 1620
Mva1269I GAATGC 3 cut(s) 345, 618, 991
MvaI CCWGG 7 cut(s) 136, 175, 396, 448, 669, 1433, 2057
MvnI CGCG 5 cut(s) 308, 581, 770, 857, 1067
MwoI GCNNNNNNNGC 7 cut(s) 179, 452, 776, 863, 922, 952, 1990
NarI GGCGCC 1 cut(s) 1572
NdeI CATATG 2 cut(s) 383, 656
NlaIII CATG 6 cut(s) 409, 682, 706, 1159, 1423, 1552
NmuCI GTSAC 5 cut(s) 322, 595, 1684, 1693, 1858
NruI TCGCGA 1 cut(s) 1067
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 706, 1159, 1423, 1552
PceI AGGCCT 2 cut(s) 745, 832
PcsI WCGNNNNNNNCGW 4 cut(s) 155, 242, 515, 1607
PctI GAATGC 3 cut(s) 345, 618, 991
PdmI GAANNNNTTC 1 cut(s) 1632
PfeI GAWTC 7 cut(s) 125, 352, 625, 772, 805, 859, 892
PflMI CCANNNNNTGG 2 cut(s) 1414, 1543
PinAI ACCGGT 3 cut(s) 198, 471, 1244
PleI GAGTC 5 cut(s) 283, 556, 1620, 1804, 1936
PluTI GGCGCC 1 cut(s) 1575
PpsI GAGTC 5 cut(s) 283, 556, 1620, 1804, 1936
PpuMI RGGWCCY 2 cut(s) 240, 513
PshAI GACNNNNGTC 1 cut(s) 1691
Psp5II RGGWCCY 2 cut(s) 240, 513
Psp6I CCWGG 7 cut(s) 134, 173, 394, 446, 667, 1431, 2055
PspEI GGTNACC 1 cut(s) 1114
PspFI CCCAGC 1 cut(s) 1202
PspGI CCWGG 7 cut(s) 134, 173, 394, 446, 667, 1431, 2055
PspOMI GGGCCC 1 cut(s) 2078
PspPPI RGGWCCY 2 cut(s) 240, 513
PsrI GAACNNNNNNTAC 4 cut(s) 2015, 2036, 2047, 2068
PstNI CAGNNNCTG 2 cut(s) 943, 1999
PsuI RGATCY 3 cut(s) 302, 575, 1823
PvuII CAGCTG 3 cut(s) 976, 1240, 1996
RruI TCGCGA 1 cut(s) 1067
RseI CAYNNNNRTG 4 cut(s) 683, 701, 1424, 1553
SacII CCGCGG 2 cut(s) 309, 582
SalI GTCGAC 2 cut(s) 1460, 1589
SaqAI TTAA 2 cut(s) 20, 711
SchI GAGTC 5 cut(s) 284, 557, 1621, 1805, 1937
SduI GDGCHC 2 cut(s) 2082, 2092
SfaNI GCATC 3 cut(s) 942, 1393, 1522
SfcI CTRYAG 1 cut(s) 935
SfoI GGCGCC 1 cut(s) 1573
Sfr303I CCGCGG 2 cut(s) 309, 582
SgrBI CCGCGG 2 cut(s) 309, 582
SinI GGWCC 5 cut(s) 240, 378, 513, 651, 1267
SmaI CCCGGG 2 cut(s) 969, 1313
SmiMI CAYNNNNRTG 4 cut(s) 683, 701, 1424, 1553
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
Sse9I AATT 4 cut(s) 16, 221, 494, 1620
SseBI AGGCCT 2 cut(s) 745, 832
SspDI GGCGCC 1 cut(s) 1571
SspMI CTAG 7 cut(s) 1089, 1128, 1145, 1199, 1466, 1595, 1785
StuI AGGCCT 2 cut(s) 745, 832
StyI CCWWGG 6 cut(s) 108, 904, 1465, 1594, 1882, 2074
TaaI ACNGT 8 cut(s) 37, 328, 601, 939, 1007, 1083, 1114, 1661
TaiI ACGT 6 cut(s) 1181, 1338, 1461, 1590, 1695, 1865
TaqII GACCGA 1 cut(s) 1605
TasI AATT 4 cut(s) 16, 221, 494, 1620
TatI WGTACW 1 cut(s) 1083
TauI GCSGC 3 cut(s) 770, 857, 1127
TfiI GAWTC 7 cut(s) 125, 352, 625, 772, 805, 859, 892
Tru1I TTAA 2 cut(s) 20, 711
Tru9I TTAA 2 cut(s) 20, 711
TscAI CASTG 7 cut(s) 333, 606, 738, 927, 1217, 1767, 1873
TseFI GTSAC 5 cut(s) 322, 595, 1684, 1693, 1858
TseI GCWGC 9 cut(s) 87, 796, 883, 973, 1141, 1237, 1699, 1993, 1996
Tsp45I GTSAC 5 cut(s) 322, 595, 1684, 1693, 1858
TspDTI ATGAA 3 cut(s) 701, 1364, 2040
TspGWI ACGGA 1 cut(s) 964
TspMI CCCGGG 2 cut(s) 967, 1311
TspRI CASTG 7 cut(s) 333, 606, 738, 927, 1217, 1767, 1873
Van91I CCANNNNNTGG 2 cut(s) 1414, 1543
Vha464I CTTAAG 1 cut(s) 710
VpaK11BI GGWCC 5 cut(s) 240, 378, 513, 651, 1267
XagI CCTNNNNNAGG 2 cut(s) 172, 445
XapI RAATTY 1 cut(s) 16
XceI RCATGY 4 cut(s) 706, 1159, 1423, 1552
XmaI CCCGGG 2 cut(s) 967, 1311
XmaJI CCTAGG 2 cut(s) 1465, 1594
XmiI GTMKAC 2 cut(s) 1461, 1590
XmnI GAANNNNTTC 1 cut(s) 1632
XspI CTAG 7 cut(s) 1089, 1128, 1145, 1199, 1466, 1595, 1785
ZraI GACGTC 2 cut(s) 1459, 1588
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.