Rmu_co8428657.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8428657.1
OG0000087
Physical Location & Seq
Forward (+)
633 .. 1304
672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8428657.1_g000002.1.cds

Sequence Viewer

Length: 672 bp
atgctctgggttttgcttgaagtggggagtaatccgctcttcaaaatggtcttagatctggttaggctaacccttgtgcttctgattccagatatagagagttttgaggttttcggtatcgtagttaggatggaatcagaaaccaggggtggggatacgggatcgtcgtaccagtcctttgccaggcaagctgaagtgcatatcgatcgatacttagcccaagtagatcaattagcagagaataccagatcctcgactggggtgttctcggaaaacggtgaggagtccgccgagggtgagagagagggtggatctgtggaggccccggtagtcatggtggcaatccccgagggcaaaccgaagcctaggtatatacttacggacgggactgtatgcgacgaacctgggagaagtatgacgatgaaggagatcatcgccataccactgaagtggggaataccggacgcggtagagcttaggcctctcaaggatggagagatggccgcgaatcctgctccggggtgggtggcgctgcacgagaaccagttccaccaagggttatcgctaccgctgccccggtgcctacagtatcagttgcggatgctgaatctgtcaccggggcagttgaccccgaatgctattcggcaaatatatagtatgatggccatgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

223

Amino Acids

24.67

Weight (kDa)

4.83

Isoelectric Point (pI)

35.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 37
AccII CGCG 2 cut(s) 467, 506
AciI CCGC 6 cut(s) 35, 288, 467, 504, 569, 598
AclWI GGATC 3 cut(s) 169, 243, 319
AcoI YGGCCR 2 cut(s) 501, 663
AcuI CTGAAG 2 cut(s) 213, 467
AfaI GTAC 1 cut(s) 170
AfiI CCNNNNNNNGG 4 cut(s) 150, 183, 258, 518
AgsI TTSAA 2 cut(s) 20, 43
AjnI CCWGG 3 cut(s) 143, 182, 403
AleI CACNNNNGTG 1 cut(s) 448
AluBI AGCT 2 cut(s) 191, 475
AluI AGCT 2 cut(s) 191, 475
AlwI GGATC 3 cut(s) 169, 243, 319
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 4 cut(s) 321, 479, 501, 663
ApeKI GCWGC 2 cut(s) 532, 571
Asp700I GAANNNNTTC 1 cut(s) 545
AspA2I CCTAGG 1 cut(s) 365
AspLEI GCGC 1 cut(s) 532
AspS9I GGNCC 1 cut(s) 322
AsuC2I CCSGG 4 cut(s) 326, 519, 577, 618
AsuHPI GGTGA 3 cut(s) 290, 308, 606
AvaI CYCGRG 1 cut(s) 347
AvrII CCTAGG 1 cut(s) 365
BalI TGGCCA 1 cut(s) 665
BanI GGYRCC 1 cut(s) 579
BauI CACGAG 1 cut(s) 536
BbvI GCAGC 2 cut(s) 519, 558
BccI CCATC 4 cut(s) 124, 485, 493, 655
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 3 cut(s) 145, 184, 405
BciVI GTATCC 1 cut(s) 148
BcnI CCSGG 4 cut(s) 326, 519, 577, 618
BfaI CTAG 1 cut(s) 366
BfmI CTRYAG 1 cut(s) 584
BfoI RGCGCY 1 cut(s) 533
BfuI GTATCC 1 cut(s) 148
BglII AGATCT 1 cut(s) 55
BisI GCNGC 3 cut(s) 504, 533, 572
BlnI CCTAGG 1 cut(s) 365
BlsI GCNGC 3 cut(s) 505, 534, 573
Bme1390I CCNGG 7 cut(s) 145, 184, 326, 405, 519, 577, 618
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 1 cut(s) 322
BmiI GGNNCC 2 cut(s) 324, 581
BmrFI CCNGG 7 cut(s) 145, 184, 326, 405, 519, 577, 618
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 1 cut(s) 591
BmuI ACTGGG 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 476
BpuEI CTTGAG 1 cut(s) 470
BpuMI CCSGG 4 cut(s) 326, 519, 577, 618
Bsa29I ATCGAT 2 cut(s) 204, 208
BsaWI WCCGGW 1 cut(s) 460
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 183, 258, 518
Bse1I ACTGG 3 cut(s) 172, 262, 544
BseBI CCWGG 3 cut(s) 145, 184, 405
BseCI ATCGAT 2 cut(s) 204, 208
BseGI GGATG 3 cut(s) 135, 496, 606
BseLI CCNNNNNNNGG 4 cut(s) 150, 183, 258, 518
BseNI ACTGG 3 cut(s) 172, 262, 544
BseRI GAGGAG 1 cut(s) 296
BseXI GCAGC 2 cut(s) 519, 558
BsgI GTGCAG 1 cut(s) 518
Bsh1236I CGCG 2 cut(s) 467, 506
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 4 cut(s) 323, 481, 503, 665
BshNI GGYRCC 1 cut(s) 579
BshVI ATCGAT 2 cut(s) 204, 208
BsiEI CGRYCG 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 5 cut(s) 326, 461, 518, 577, 617
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 4 cut(s) 150, 183, 258, 518
BsmFI GGGAC 1 cut(s) 400
BsmI GAATGC 1 cut(s) 640
BsnI GGCC 4 cut(s) 323, 481, 503, 665
BsoBI CYCGRG 1 cut(s) 347
Bsp143I GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
BspACI CCGC 6 cut(s) 35, 288, 467, 504, 569, 598
BspANI GGCC 4 cut(s) 323, 481, 503, 665
BspDI ATCGAT 2 cut(s) 204, 208
BspFNI CGCG 2 cut(s) 467, 506
BspLI GGNNCC 2 cut(s) 324, 581
BspPI GGATC 3 cut(s) 169, 243, 319
BspQI GCTCTTC 1 cut(s) 44
BspT107I GGYRCC 1 cut(s) 579
BsrBI CCGCTC 1 cut(s) 37
BsrI ACTGG 3 cut(s) 172, 262, 544
BssMI GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
BssSI CACGAG 1 cut(s) 536
BssT1I CCWWGG 2 cut(s) 365, 553
Bst2BI CACGAG 1 cut(s) 536
Bst2UI CCWGG 3 cut(s) 145, 184, 405
Bst4CI ACNGT 3 cut(s) 278, 391, 588
Bst6I CTCTTC 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 189
BstDEI CTNAG 3 cut(s) 52, 214, 476
BstENI CCTNNNNNAGG 1 cut(s) 181
BstF5I GGATG 3 cut(s) 135, 496, 606
BstFNI CGCG 2 cut(s) 467, 506
BstH2I RGCGCY 1 cut(s) 533
BstHHI GCGC 1 cut(s) 532
BstKTI GATC 7 cut(s) 58, 164, 208, 229, 251, 314, 432
BstMBI GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 3 cut(s) 188, 512, 571
BstNI CCWGG 3 cut(s) 145, 184, 405
BstSCI CCNGG 7 cut(s) 143, 182, 324, 403, 517, 575, 616
BstSFI CTRYAG 1 cut(s) 584
BstUI CGCG 2 cut(s) 467, 506
BstV1I GCAGC 2 cut(s) 519, 558
BstX2I RGATCY 3 cut(s) 55, 248, 311
BstXI CCANNNNNNTGG 1 cut(s) 450
BstYI RGATCY 3 cut(s) 55, 248, 311
Bsu15I ATCGAT 2 cut(s) 204, 208
BsuI GTATCC 1 cut(s) 148
BsuRI GGCC 4 cut(s) 323, 481, 503, 665
BsuTUI ATCGAT 2 cut(s) 204, 208
BtgZI GCGATG 1 cut(s) 418
BtsCI GGATG 3 cut(s) 135, 496, 606
BtsIMutI CAGTG 1 cut(s) 443
Cac8I GCNNGC 1 cut(s) 189
CfoI GCGC 1 cut(s) 532
Cfr13I GGNCC 1 cut(s) 322
ClaI ATCGAT 2 cut(s) 204, 208
CseI GACGC 1 cut(s) 473
Csp6I GTAC 1 cut(s) 169
CviAII CATG 2 cut(s) 334, 667
CviJI RGCY 9 cut(s) 67, 191, 218, 323, 364, 475, 481, 503, 665
CviKI_1 RGCY 9 cut(s) 67, 191, 218, 323, 364, 475, 481, 503, 665
CviQI GTAC 1 cut(s) 169
DdeI CTNAG 3 cut(s) 52, 214, 476
DpnI GATC 7 cut(s) 57, 163, 207, 228, 250, 313, 431
DpnII GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
EaeI YGGCCR 2 cut(s) 501, 663
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
EciI GGCGGA 1 cut(s) 277
Eco130I CCWWGG 2 cut(s) 365, 553
Eco147I AGGCCT 1 cut(s) 481
Eco57I CTGAAG 2 cut(s) 213, 467
Eco88I CYCGRG 1 cut(s) 347
EcoNI CCTNNNNNAGG 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 3 cut(s) 143, 182, 403
EcoT14I CCWWGG 2 cut(s) 365, 553
ErhI CCWWGG 2 cut(s) 365, 553
FaeI CATG 2 cut(s) 337, 670
FaqI GGGAC 1 cut(s) 400
FatI CATG 2 cut(s) 333, 666
Fnu4HI GCNGC 3 cut(s) 504, 533, 572
FokI GGATG 3 cut(s) 142, 503, 613
Fsp4HI GCNGC 3 cut(s) 504, 533, 572
FspBI CTAG 1 cut(s) 366
GlaI GCGC 1 cut(s) 531
GluI GCNGC 3 cut(s) 504, 533, 572
HaeII RGCGCY 1 cut(s) 533
HaeIII GGCC 4 cut(s) 323, 481, 503, 665
HapII CCGG 5 cut(s) 326, 461, 518, 577, 617
HgaI GACGC 1 cut(s) 473
HhaI GCGC 1 cut(s) 532
Hin1II CATG 2 cut(s) 337, 670
Hin6I GCGC 1 cut(s) 530
HinP1I GCGC 1 cut(s) 530
HincII GTYRAC 1 cut(s) 627
HindII GTYRAC 1 cut(s) 627
HinfI GANTC 5 cut(s) 85, 134, 284, 508, 607
HpaII CCGG 5 cut(s) 326, 461, 518, 577, 617
HphI GGTGA 3 cut(s) 290, 308, 606
Hpy166II GTNNAC 1 cut(s) 627
Hpy188I TCNGA 3 cut(s) 84, 139, 271
Hpy188III TCNNGA 1 cut(s) 89
Hpy8I GTNNAC 1 cut(s) 627
Hpy99I CGWCG 2 cut(s) 169, 401
HpyAV CCTTC 1 cut(s) 418
HpyCH4III ACNGT 3 cut(s) 278, 391, 588
HpyCH4V TGCA 2 cut(s) 199, 535
HpyF10VI GCNNNNNNNGC 3 cut(s) 188, 512, 571
HpyF3I CTNAG 3 cut(s) 52, 214, 476
Hsp92II CATG 2 cut(s) 337, 670
HspAI GCGC 1 cut(s) 530
Kzo9I GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
LguI GCTCTTC 1 cut(s) 44
LmnI GCTCC 1 cut(s) 520
Lsp1109I GCAGC 2 cut(s) 519, 558
LweI GCATC 1 cut(s) 591
MaeI CTAG 1 cut(s) 366
MaeIII GTNAC 1 cut(s) 612
MalI GATC 7 cut(s) 57, 163, 207, 228, 250, 313, 431
MbiI CCGCTC 1 cut(s) 37
MboI GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
MboII GAAGA 1 cut(s) 31
MflI RGATCY 3 cut(s) 55, 248, 311
MlsI TGGCCA 1 cut(s) 665
MluCI AATT 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 665
MlyI GAGTC 1 cut(s) 293
MnlI CCTC 8 cut(s) 100, 262, 274, 286, 298, 313, 343, 492
Mox20I TGGCCA 1 cut(s) 665
MroXI GAANNNNTTC 1 cut(s) 545
MscI TGGCCA 1 cut(s) 665
MslI CAYNNNNRTG 1 cut(s) 448
Msp20I TGGCCA 1 cut(s) 665
MspA1I CMGCKG 1 cut(s) 571
MspI CCGG 5 cut(s) 326, 461, 518, 577, 617
MspR9I CCNGG 7 cut(s) 145, 184, 326, 405, 519, 577, 618
Mva1269I GAATGC 1 cut(s) 640
MvaI CCWGG 3 cut(s) 145, 184, 405
MvnI CGCG 2 cut(s) 467, 506
MwoI GCNNNNNNNGC 3 cut(s) 188, 512, 571
NciI CCSGG 4 cut(s) 326, 519, 577, 618
NdeII GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
NlaIII CATG 2 cut(s) 337, 670
NlaIV GGNNCC 2 cut(s) 324, 581
NmeAIII GCCGAG 1 cut(s) 316
NmuCI GTSAC 1 cut(s) 612
OliI CACNNNNGTG 1 cut(s) 448
PceI AGGCCT 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 44
PcsI WCGNNNNNNNCGW 1 cut(s) 164
PctI GAATGC 1 cut(s) 640
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 4 cut(s) 85, 134, 508, 607
PkrI GCNGC 3 cut(s) 505, 534, 573
Ple19I CGATCG 1 cut(s) 208
PleI GAGTC 1 cut(s) 292
PpsI GAGTC 1 cut(s) 292
Psp6I CCWGG 3 cut(s) 143, 182, 403
PspGI CCWGG 3 cut(s) 143, 182, 403
PspN4I GGNNCC 2 cut(s) 324, 581
PspPI GGNCC 1 cut(s) 322
PsuI RGATCY 3 cut(s) 55, 248, 311
PvuI CGATCG 1 cut(s) 208
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
RseI CAYNNNNRTG 1 cut(s) 448
SapI GCTCTTC 1 cut(s) 44
SatI GCNGC 3 cut(s) 504, 533, 572
Sau3AI GATC 7 cut(s) 55, 161, 205, 226, 248, 311, 429
Sau96I GGNCC 1 cut(s) 322
SchI GAGTC 1 cut(s) 293
ScrFI CCNGG 7 cut(s) 145, 184, 326, 405, 519, 577, 618
SetI ASST 5 cut(s) 111, 193, 371, 406, 477
SfaNI GCATC 1 cut(s) 591
SfcI CTRYAG 1 cut(s) 584
SmiMI CAYNNNNRTG 1 cut(s) 448
SmlI CTYRAG 1 cut(s) 485
SmoI CTYRAG 1 cut(s) 485
Sse9I AATT 1 cut(s) 230
SseBI AGGCCT 1 cut(s) 481
SsiI CCGC 6 cut(s) 35, 288, 467, 504, 569, 598
SspMI CTAG 1 cut(s) 366
StuI AGGCCT 1 cut(s) 481
StyD4I CCNGG 7 cut(s) 143, 182, 324, 403, 517, 575, 616
StyI CCWWGG 2 cut(s) 365, 553
TaaI ACNGT 3 cut(s) 278, 391, 588
TaqI TCGA 3 cut(s) 204, 208, 254
TasI AATT 1 cut(s) 230
TauI GCSGC 1 cut(s) 506
TfiI GAWTC 4 cut(s) 85, 134, 508, 607
TscAI CASTG 1 cut(s) 450
TseFI GTSAC 1 cut(s) 612
TseI GCWGC 2 cut(s) 532, 571
Tsp45I GTSAC 1 cut(s) 612
TspDTI ATGAA 1 cut(s) 437
TspGWI ACGGA 1 cut(s) 395
TspRI CASTG 1 cut(s) 450
XagI CCTNNNNNAGG 1 cut(s) 181
XmaJI CCTAGG 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.