Rroxscaffold_4G00322830

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000087
Physical Location & Seq
Reverse (-)
53346799 .. 53347767
969 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00322830.1

Sequence Viewer

Length: 483 bp
ATGGTTGCGAATCCTTCCCCGGGATGGGTAGCGCTGCACGAGAACCAGCTCCACCAAGGGCTATCACTACCACCGCCCGAGCCTACGGTATCTTTTGCGAATGCTGAACCCGTCACGAGGGCGGTTGATTCCGAACGCAGATTCGACAAATATTTACACGGAAAAGGAAGCCCCGAAAAGGTAAGGAGGATGACGAGAATGGATGACAACCGAGTTGATGGACATGTTAATGAGCCAGGGAGAAGACGCCCGCACATTGAAGTCGACACGGAGTCGAAGGCTACGGGTCGCTCCATTGAAGAAACCCTACCGGAGATCACTAATGAAGAATACGAAGCCCGACCACGATGCTCCCATGACCCAAGTCGAGCAGCCTTCGCACGGAATGTTGTCATCATAGCCGATCCTAGAAGGGAAAAGGTACCGCCGTCGTATCTCTCTCTTCTCGGTCCCCCGGAAGCGATGAAGTCTTGCTTCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

160

Amino Acids

18.04

Weight (kDa)

7.03

Isoelectric Point (pI)

71.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 421
AccB1I GGYRCC 1 cut(s) 421
AccI GTMKAC 1 cut(s) 264
AciI CCGC 4 cut(s) 74, 122, 251, 425
AclWI GGATC 1 cut(s) 398
AcyI GRCGYC 1 cut(s) 247
AfaI GTAC 1 cut(s) 423
AfeI AGCGCT 1 cut(s) 33
AfiI CCNNNNNNNGG 6 cut(s) 20, 24, 25, 117, 178, 381
AflIII ACRYGT 1 cut(s) 223
AgsI TTSAA 2 cut(s) 260, 299
AhdI GACNNNNNGTC 1 cut(s) 271
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 1 cut(s) 49
AluI AGCT 1 cut(s) 49
AlwI GGATC 1 cut(s) 398
Ama87I CYCGRG 2 cut(s) 19, 77
Aor51HI AGCGCT 1 cut(s) 33
ApeKI GCWGC 2 cut(s) 34, 371
Asp718I GGTACC 1 cut(s) 421
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 1 cut(s) 449
AsuC2I CCSGG 3 cut(s) 20, 21, 455
AvaI CYCGRG 2 cut(s) 19, 77
AvaII GGWCC 1 cut(s) 449
BaeI ACNNNNGTAYC 2 cut(s) 413, 446
BanI GGYRCC 1 cut(s) 421
BarI GAAGNNNNNNTAC 2 cut(s) 291, 323
BauI CACGAG 2 cut(s) 38, 115
BbsI GAAGAC 1 cut(s) 250
BbvI GCAGC 2 cut(s) 21, 383
BccI CCATC 2 cut(s) 18, 212
BceAI ACGGC 1 cut(s) 412
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciT130I CCWGG 1 cut(s) 237
BcnI CCSGG 3 cut(s) 20, 21, 455
BfaI CTAG 1 cut(s) 408
BfoI RGCGCY 1 cut(s) 35
BisI GCNGC 2 cut(s) 35, 372
BlsI GCNGC 2 cut(s) 36, 373
Bme1390I CCNGG 4 cut(s) 20, 21, 237, 455
Bme18I GGWCC 1 cut(s) 449
BmeRI GACNNNNNGTC 1 cut(s) 271
BmeT110I CYCGRG 2 cut(s) 19, 77
BmgT120I GGNCC 1 cut(s) 449
BmiI GGNNCC 2 cut(s) 423, 451
BmrFI CCNGG 4 cut(s) 20, 21, 237, 455
BmsI GCATC 1 cut(s) 338
BoxI GACNNNNGTC 1 cut(s) 363
BpiI GAAGAC 1 cut(s) 250
BpuMI CCSGG 3 cut(s) 20, 21, 455
BsaHI GRCGYC 1 cut(s) 247
BsaJI CCNNGG 5 cut(s) 18, 19, 55, 236, 453
BsaWI WCCGGW 2 cut(s) 310, 477
Bsc4I CCNNNNNNNGG 6 cut(s) 20, 24, 25, 117, 178, 381
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 5 cut(s) 18, 19, 55, 236, 453
BseGI GGATG 3 cut(s) 29, 195, 208
BseLI CCNNNNNNNGG 6 cut(s) 20, 24, 25, 117, 178, 381
BseXI GCAGC 2 cut(s) 21, 383
BsgI GTGCAG 1 cut(s) 20
BshNI GGYRCC 1 cut(s) 421
BsiHKCI CYCGRG 2 cut(s) 19, 77
BsiSI CCGG 4 cut(s) 20, 311, 455, 478
BslFI GGGAC 1 cut(s) 435
BslI CCNNNNNNNGG 6 cut(s) 20, 24, 25, 117, 178, 381
BsmFI GGGAC 1 cut(s) 435
BsmI GAATGC 1 cut(s) 106
BsoBI CYCGRG 2 cut(s) 19, 77
Bsp143I GATC 2 cut(s) 315, 403
BspACI CCGC 4 cut(s) 74, 122, 251, 425
BspLI GGNNCC 2 cut(s) 423, 451
BspPI GGATC 1 cut(s) 398
BspT107I GGYRCC 1 cut(s) 421
BssECI CCNNGG 5 cut(s) 18, 19, 55, 236, 453
BssMI GATC 2 cut(s) 315, 403
BssNI GRCGYC 1 cut(s) 247
BssSI CACGAG 2 cut(s) 38, 115
BssT1I CCWWGG 1 cut(s) 55
Bst2BI CACGAG 2 cut(s) 38, 115
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 1 cut(s) 447
BstACI GRCGYC 1 cut(s) 247
BstC8I GCNNGC 1 cut(s) 251
BstF5I GGATG 3 cut(s) 29, 195, 208
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 2 cut(s) 318, 406
BstMBI GATC 2 cut(s) 315, 403
BstMWI GCNNNNNNNGC 1 cut(s) 377
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 1 cut(s) 227
BstPAI GACNNNNGTC 1 cut(s) 363
BstSCI CCNGG 4 cut(s) 18, 19, 235, 453
BstV1I GCAGC 2 cut(s) 21, 383
BstV2I GAAGAC 1 cut(s) 250
BtgZI GCGATG 1 cut(s) 476
BtsCI GGATG 3 cut(s) 29, 195, 208
Cac8I GCNNGC 1 cut(s) 251
CfoI GCGC 1 cut(s) 34
Cfr13I GGNCC 1 cut(s) 449
Cfr9I CCCGGG 1 cut(s) 19
CseI GACGC 1 cut(s) 255
Csp6I GTAC 1 cut(s) 422
CviAII CATG 2 cut(s) 224, 356
CviJI RGCY 9 cut(s) 49, 61, 82, 171, 235, 281, 338, 374, 401
CviKI_1 RGCY 9 cut(s) 49, 61, 82, 171, 235, 281, 338, 374, 401
CviQI GTAC 1 cut(s) 422
DpnI GATC 2 cut(s) 317, 405
DpnII GATC 2 cut(s) 315, 403
DriI GACNNNNNGTC 1 cut(s) 271
Eam1104I CTCTTC 1 cut(s) 447
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 1 cut(s) 447
Eco130I CCWWGG 1 cut(s) 55
Eco47I GGWCC 1 cut(s) 449
Eco47III AGCGCT 1 cut(s) 33
Eco88I CYCGRG 2 cut(s) 19, 77
EcoRII CCWGG 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 55
FaeI CATG 2 cut(s) 227, 359
FaiI YATR 3 cut(s) 225, 357, 398
FalI AAGNNNNNCTT 1 cut(s) 458
FaqI GGGAC 1 cut(s) 435
FatI CATG 2 cut(s) 223, 355
FauI CCCGC 1 cut(s) 258
FblI GTMKAC 1 cut(s) 264
Fnu4HI GCNGC 2 cut(s) 35, 372
FokI GGATG 3 cut(s) 36, 202, 215
Fsp4HI GCNGC 2 cut(s) 35, 372
FspBI CTAG 1 cut(s) 408
GlaI GCGC 1 cut(s) 33
GluI GCNGC 2 cut(s) 35, 372
HaeII RGCGCY 1 cut(s) 35
HapII CCGG 4 cut(s) 20, 311, 455, 478
HgaI GACGC 1 cut(s) 255
HhaI GCGC 1 cut(s) 34
Hin1I GRCGYC 1 cut(s) 247
Hin1II CATG 2 cut(s) 227, 359
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 4 cut(s) 10, 128, 141, 272
HpaII CCGG 4 cut(s) 20, 311, 455, 478
Hpy166II GTNNAC 1 cut(s) 265
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 115
Hpy8I GTNNAC 1 cut(s) 265
Hpy99I CGWCG 1 cut(s) 433
HpyAV CCTTC 4 cut(s) 24, 271, 385, 405
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 1 cut(s) 37
HpyF10VI GCNNNNNNNGC 1 cut(s) 377
Hsp92I GRCGYC 1 cut(s) 247
Hsp92II CATG 2 cut(s) 227, 359
HspAI GCGC 1 cut(s) 32
KpnI GGTACC 1 cut(s) 425
Kzo9I GATC 2 cut(s) 315, 403
LmnI GCTCC 3 cut(s) 54, 296, 356
LpnPI CCDG 6 cut(s) 33, 59, 222, 249, 324, 468
Lsp1109I GCAGC 2 cut(s) 21, 383
LweI GCATC 1 cut(s) 338
MaeI CTAG 1 cut(s) 408
MaeIII GTNAC 1 cut(s) 112
MalI GATC 2 cut(s) 317, 405
MboI GATC 2 cut(s) 315, 403
MboII GAAGA 4 cut(s) 255, 311, 338, 434
MlyI GAGTC 1 cut(s) 281
MnlI CCTC 2 cut(s) 111, 180
MseI TTAA 1 cut(s) 228
MslI CAYNNNNRTG 1 cut(s) 228
MspI CCGG 4 cut(s) 20, 311, 455, 478
MspR9I CCNGG 4 cut(s) 20, 21, 237, 455
Mva1269I GAATGC 1 cut(s) 106
MvaI CCWGG 1 cut(s) 237
MwoI GCNNNNNNNGC 1 cut(s) 377
NciI CCSGG 3 cut(s) 20, 21, 455
NdeII GATC 2 cut(s) 315, 403
NlaIII CATG 2 cut(s) 227, 359
NlaIV GGNNCC 2 cut(s) 423, 451
NmuCI GTSAC 1 cut(s) 112
NspI RCATGY 1 cut(s) 227
PciI ACATGT 1 cut(s) 223
PctI GAATGC 1 cut(s) 106
PfeI GAWTC 3 cut(s) 10, 128, 141
PkrI GCNGC 2 cut(s) 36, 373
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
PscI ACATGT 1 cut(s) 223
PshAI GACNNNNGTC 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 235
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 2 cut(s) 423, 451
PspPI GGNCC 1 cut(s) 449
RsaI GTAC 1 cut(s) 423
RsaNI GTAC 1 cut(s) 422
RseI CAYNNNNRTG 1 cut(s) 228
SalI GTCGAC 1 cut(s) 263
SaqAI TTAA 1 cut(s) 228
SatI GCNGC 2 cut(s) 35, 372
Sau3AI GATC 2 cut(s) 315, 403
Sau96I GGNCC 1 cut(s) 449
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 4 cut(s) 20, 21, 237, 455
SetI ASST 3 cut(s) 51, 183, 423
SfaNI GCATC 1 cut(s) 338
SinI GGWCC 1 cut(s) 449
SmaI CCCGGG 1 cut(s) 21
SmiMI CAYNNNNRTG 1 cut(s) 228
SsiI CCGC 4 cut(s) 74, 122, 251, 425
SspI AATATT 1 cut(s) 152
SspMI CTAG 1 cut(s) 408
StyD4I CCNGG 4 cut(s) 18, 19, 235, 453
StyI CCWWGG 1 cut(s) 55
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 4 cut(s) 144, 264, 275, 367
TaqII GACCGA 1 cut(s) 437
TfiI GAWTC 3 cut(s) 10, 128, 141
Tru1I TTAA 1 cut(s) 228
Tru9I TTAA 1 cut(s) 228
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 2 cut(s) 34, 371
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 2 cut(s) 339, 479
TspGWI ACGGA 3 cut(s) 174, 284, 397
TspMI CCCGGG 1 cut(s) 19
VpaK11BI GGWCC 1 cut(s) 449
XceI RCATGY 1 cut(s) 227
XmaI CCCGGG 1 cut(s) 19
XmiI GTMKAC 1 cut(s) 264
XspI CTAG 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.