Rroxscaffold_4G00324370

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000087
Physical Location & Seq
Reverse (-)
55781617 .. 55782671
1055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00324370.1

Sequence Viewer

Length: 843 bp
ATGGAGGGTATGGGGACCACGATCTTGAAGCTCTCGTTACCTAGGTCGAGCGGCGTGTTGCGGGAACTTGGTCACCATTGCGATACGGGGAAGAGGGAAGGCGGCGGTATGCGGCTCTATCTCTTCCCGGTTCGCACGGTCGGTGGAAGCGAGGATGTCTTGCTTCTGGTGAGAAGAAAAGGTTCCACGAGGCACCACCATCGAAGCGGGGATAAGGAGGAGGTTACCTATACGGCCGGGACGTTAAAGGGTTCGGACCGAAGAGGCAAAAAGCGAGTCATTCGGGACGGAGCTGTCGCTCTCGCTTGCGCTCTTGTCTCCGGCAATACCAATAGTCCCCAAGAAGCTCATCAAGCAAGCTTGTTGAATGAGTACGGGGTTGCCGATGAGAAGTTCGTGCGTTCAATGCTCGCCGACTTGAAAGACATTGACCTTGACCGAGCCTTGTTCAACGTGTACGCGATCGACGCTAGTGAGGAAGATACTCACTTGAAGGAAGAGGTTAGCAATCTCTCCGGGCAAGTGAAGTATCTTCATGGGGAGAAAGCAAAGGCTGGAGAAGGAACGAGACTCTTTGAAGAAGAAGATAGAATCCTTAACTCCCAAGGGAGTGTCCGGGACTCCGAGAAAGAAGCTGCGGAATCTGCAAGCGTGGAAGGCGAAGGCGAGCATGCGGAGGAGCGCCTTCCCTTGGAAAGGCACGAGGGCGTGGCCAAGTACAAAGACTCCCAAGAGCTGATTGATATGCTACTCGCCGCCCAAGATAAAGCCGTGATCATGAAGTACAAAGAGTGGGTGGCAGCGGGTACCTGGATGAAGTCAAATTCGGCGGGGACTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

280

Amino Acids

30.74

Weight (kDa)

5.86

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 293
Acc65I GGTACC 1 cut(s) 806
AccB1I GGYRCC 2 cut(s) 192, 806
AccBSI CCGCTC 1 cut(s) 51
AccII CGCG 1 cut(s) 461
AcoI YGGCCR 2 cut(s) 234, 711
AcsI RAATTY 1 cut(s) 823
AfaI GTAC 5 cut(s) 374, 458, 719, 785, 808
AfiI CCNNNNNNNGG 2 cut(s) 691, 696
AflIII ACRYGT 1 cut(s) 453
AgsI TTSAA 7 cut(s) 28, 367, 405, 421, 451, 493, 578
AjnI CCWGG 1 cut(s) 809
AluBI AGCT 6 cut(s) 31, 293, 347, 360, 635, 736
AluI AGCT 6 cut(s) 31, 293, 347, 360, 635, 736
Alw26I GTCTC 2 cut(s) 322, 562
AoxI GGCC 2 cut(s) 234, 711
ApeKI GCWGC 2 cut(s) 635, 800
ApoI RAATTY 1 cut(s) 823
ArsI GACNNNNNNTTYG 2 cut(s) 261, 293
Asp700I GAANNNNTTC 1 cut(s) 181
Asp718I GGTACC 1 cut(s) 806
AspA2I CCTAGG 1 cut(s) 41
AspLEI GCGC 2 cut(s) 311, 684
AspS9I GGNCC 2 cut(s) 15, 256
AsuC2I CCSGG 4 cut(s) 128, 238, 517, 617
AsuHPI GGTGA 2 cut(s) 65, 181
AvaII GGWCC 2 cut(s) 15, 256
AvrII CCTAGG 1 cut(s) 41
BalI TGGCCA 1 cut(s) 713
BanI GGYRCC 2 cut(s) 192, 806
BauI CACGAG 2 cut(s) 187, 701
BbvI GCAGC 2 cut(s) 622, 812
BccI CCATC 1 cut(s) 207
BceAI ACGGC 2 cut(s) 249, 755
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 1 cut(s) 811
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 4 cut(s) 128, 238, 517, 617
BcoDI GTCTC 2 cut(s) 322, 562
BfaI CTAG 2 cut(s) 42, 471
BfoI RGCGCY 1 cut(s) 685
BisI GCNGC 6 cut(s) 52, 103, 113, 636, 756, 801
BlnI CCTAGG 1 cut(s) 41
BlsI GCNGC 6 cut(s) 53, 104, 114, 637, 757, 802
Bme1390I CCNGG 5 cut(s) 128, 238, 517, 617, 811
Bme18I GGWCC 2 cut(s) 15, 256
BmgT120I GGNCC 2 cut(s) 15, 256
BmiI GGNNCC 4 cut(s) 16, 184, 194, 808
BmrFI CCNGG 5 cut(s) 128, 238, 517, 617, 811
BpmI CTGGAG 1 cut(s) 576
BpuMI CCSGG 4 cut(s) 128, 238, 517, 617
BsaJI CCNNGG 3 cut(s) 41, 604, 690
BsaXI ACNNNNNCTCC 2 cut(s) 710, 740
Bsc4I CCNNNNNNNGG 2 cut(s) 691, 696
Bse3DI GCAATG 1 cut(s) 76
BseBI CCWGG 1 cut(s) 811
BseDI CCNNGG 3 cut(s) 41, 604, 690
BseGI GGATG 2 cut(s) 160, 819
BseLI CCNNNNNNNGG 2 cut(s) 691, 696
BseMI GCAATG 1 cut(s) 76
BseRI GAGGAG 2 cut(s) 233, 692
BseX3I CGGCCG 1 cut(s) 234
BseXI GCAGC 2 cut(s) 622, 812
Bsh1236I CGCG 1 cut(s) 461
Bsh1285I CGRYCG 3 cut(s) 141, 237, 465
BshFI GGCC 2 cut(s) 236, 713
BshNI GGYRCC 2 cut(s) 192, 806
BsiEI CGRYCG 3 cut(s) 141, 237, 465
BsiSI CCGG 5 cut(s) 128, 237, 321, 516, 616
BslFI GGGAC 5 cut(s) 28, 253, 299, 321, 632
BslI CCNNNNNNNGG 2 cut(s) 691, 696
BsmAI GTCTC 2 cut(s) 322, 562
BsmFI GGGAC 5 cut(s) 28, 253, 299, 321, 632
BsnI GGCC 2 cut(s) 236, 713
Bsp143I GATC 3 cut(s) 21, 462, 774
BspANI GGCC 2 cut(s) 236, 713
BspFNI CGCG 1 cut(s) 461
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 4 cut(s) 16, 184, 194, 808
BspT107I GGYRCC 2 cut(s) 192, 806
BsrBI CCGCTC 1 cut(s) 51
BsrDI GCAATG 1 cut(s) 76
BssECI CCNNGG 3 cut(s) 41, 604, 690
BssMI GATC 3 cut(s) 21, 462, 774
BssSI CACGAG 2 cut(s) 187, 701
BssT1I CCWWGG 3 cut(s) 41, 604, 690
Bst2BI CACGAG 2 cut(s) 187, 701
Bst2UI CCWGG 1 cut(s) 811
Bst4CI ACNGT 1 cut(s) 139
Bst6I CTCTTC 4 cut(s) 86, 128, 256, 492
BstC8I GCNNGC 6 cut(s) 307, 358, 411, 649, 668, 672
BstEII GGTNACC 2 cut(s) 71, 223
BstENI CCTNNNNNAGG 1 cut(s) 694
BstF5I GGATG 2 cut(s) 160, 819
BstFNI CGCG 1 cut(s) 461
BstH2I RGCGCY 1 cut(s) 685
BstHHI GCGC 2 cut(s) 311, 684
BstKTI GATC 3 cut(s) 24, 465, 777
BstMAI GTCTC 2 cut(s) 322, 562
BstMBI GATC 3 cut(s) 21, 462, 774
BstMCI CGRYCG 3 cut(s) 141, 237, 465
BstMWI GCNNNNNNNGC 5 cut(s) 353, 406, 467, 644, 657
BstNI CCWGG 1 cut(s) 811
BstNSI RCATGY 1 cut(s) 674
BstPI GGTNACC 2 cut(s) 71, 223
BstSCI CCNGG 5 cut(s) 126, 236, 515, 615, 809
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 2 cut(s) 622, 812
BstZI CGGCCG 1 cut(s) 234
BsuRI GGCC 2 cut(s) 236, 713
BtsCI GGATG 2 cut(s) 160, 819
Cac8I GCNNGC 6 cut(s) 307, 358, 411, 649, 668, 672
CciI TCATGA 1 cut(s) 777
CfoI GCGC 2 cut(s) 311, 684
Cfr13I GGNCC 2 cut(s) 15, 256
CpoI CGGWCCG 1 cut(s) 256
CseI GACGC 1 cut(s) 476
Csp6I GTAC 5 cut(s) 373, 457, 718, 784, 807
CspI CGGWCCG 1 cut(s) 256
CviAII CATG 3 cut(s) 536, 671, 778
CviQI GTAC 5 cut(s) 373, 457, 718, 784, 807
DpnI GATC 3 cut(s) 23, 464, 776
DpnII GATC 3 cut(s) 21, 462, 774
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
EaeI YGGCCR 2 cut(s) 234, 711
EagI CGGCCG 1 cut(s) 234
Eam1104I CTCTTC 4 cut(s) 86, 128, 256, 492
EarI CTCTTC 4 cut(s) 86, 128, 256, 492
EclXI CGGCCG 1 cut(s) 234
Eco130I CCWWGG 3 cut(s) 41, 604, 690
Eco47I GGWCC 2 cut(s) 15, 256
Eco52I CGGCCG 1 cut(s) 234
Eco91I GGTNACC 2 cut(s) 71, 223
EcoNI CCTNNNNNAGG 1 cut(s) 694
EcoO65I GGTNACC 2 cut(s) 71, 223
EcoRII CCWGG 1 cut(s) 809
EcoT14I CCWWGG 3 cut(s) 41, 604, 690
ErhI CCWWGG 3 cut(s) 41, 604, 690
FaeI CATG 3 cut(s) 539, 674, 781
FaiI YATR 7 cut(s) 11, 110, 231, 537, 672, 746, 779
FaqI GGGAC 5 cut(s) 28, 253, 299, 321, 632
FatI CATG 3 cut(s) 535, 670, 777
FauI CCCGC 4 cut(s) 54, 200, 796, 823
FbaI TGATCA 1 cut(s) 774
Fnu4HI GCNGC 6 cut(s) 52, 103, 113, 636, 756, 801
FokI GGATG 2 cut(s) 167, 826
Fsp4HI GCNGC 6 cut(s) 52, 103, 113, 636, 756, 801
FspBI CTAG 2 cut(s) 42, 471
GlaI GCGC 2 cut(s) 310, 683
GluI GCNGC 6 cut(s) 52, 103, 113, 636, 756, 801
GsuI CTGGAG 1 cut(s) 576
HaeII RGCGCY 1 cut(s) 685
HaeIII GGCC 2 cut(s) 236, 713
HapII CCGG 5 cut(s) 128, 237, 321, 516, 616
HgaI GACGC 1 cut(s) 476
HhaI GCGC 2 cut(s) 311, 684
Hin1II CATG 3 cut(s) 539, 674, 781
Hin6I GCGC 2 cut(s) 309, 682
HinP1I GCGC 2 cut(s) 309, 682
HindIII AAGCTT 1 cut(s) 358
HinfI GANTC 6 cut(s) 276, 570, 591, 620, 641, 725
HpaII CCGG 5 cut(s) 128, 237, 321, 516, 616
HphI GGTGA 2 cut(s) 65, 181
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 2 cut(s) 256, 625
Hpy188III TCNNGA 4 cut(s) 25, 284, 778, 840
Hpy8I GTNNAC 1 cut(s) 457
Hpy99I CGWCG 1 cut(s) 470
HpyAV CCTTC 6 cut(s) 92, 487, 554, 650, 656, 695
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 2 cut(s) 242, 453
HpyCH4V TGCA 1 cut(s) 647
HpyF10VI GCNNNNNNNGC 5 cut(s) 353, 406, 467, 644, 657
HpySE526I ACGT 2 cut(s) 242, 453
Hsp92II CATG 3 cut(s) 539, 674, 781
HspAI GCGC 2 cut(s) 309, 682
KpnI GGTACC 1 cut(s) 810
Ksp22I TGATCA 1 cut(s) 774
Kzo9I GATC 3 cut(s) 21, 462, 774
LmnI GCTCC 2 cut(s) 290, 679
LpnPI CCDG 9 cut(s) 141, 152, 250, 334, 529, 540, 629, 796, 823
Lsp1109I GCAGC 2 cut(s) 622, 812
MaeI CTAG 2 cut(s) 42, 471
MaeII ACGT 2 cut(s) 242, 453
MaeIII GTNAC 3 cut(s) 36, 71, 223
MalI GATC 3 cut(s) 23, 464, 776
MbiI CCGCTC 1 cut(s) 51
MboI GATC 3 cut(s) 21, 462, 774
MlsI TGGCCA 1 cut(s) 713
MluCI AATT 1 cut(s) 823
MluNI TGGCCA 1 cut(s) 713
MlyI GAGTC 4 cut(s) 285, 564, 614, 719
Mox20I TGGCCA 1 cut(s) 713
MroXI GAANNNNTTC 1 cut(s) 181
MscI TGGCCA 1 cut(s) 713
MseI TTAA 2 cut(s) 245, 597
Msp20I TGGCCA 1 cut(s) 713
MspA1I CMGCKG 1 cut(s) 803
MspI CCGG 5 cut(s) 128, 237, 321, 516, 616
MspR9I CCNGG 5 cut(s) 128, 238, 517, 617, 811
MvaI CCWGG 1 cut(s) 811
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 5 cut(s) 353, 406, 467, 644, 657
NciI CCSGG 4 cut(s) 128, 238, 517, 617
NdeII GATC 3 cut(s) 21, 462, 774
NlaIII CATG 3 cut(s) 539, 674, 781
NlaIV GGNNCC 4 cut(s) 16, 184, 194, 808
NmuCI GTSAC 1 cut(s) 71
NspI RCATGY 1 cut(s) 674
PaeI GCATGC 1 cut(s) 674
PagI TCATGA 1 cut(s) 777
PcsI WCGNNNNNNNCGW 3 cut(s) 147, 239, 381
PdmI GAANNNNTTC 1 cut(s) 181
PfeI GAWTC 2 cut(s) 591, 641
PfoI TCCNGGA 1 cut(s) 615
PkrI GCNGC 6 cut(s) 53, 104, 114, 637, 757, 802
Ple19I CGATCG 1 cut(s) 465
PleI GAGTC 4 cut(s) 284, 564, 614, 719
PpsI GAGTC 4 cut(s) 284, 564, 614, 719
Psp6I CCWGG 1 cut(s) 809
PspEI GGTNACC 2 cut(s) 71, 223
PspGI CCWGG 1 cut(s) 809
PspN4I GGNNCC 4 cut(s) 16, 184, 194, 808
PspPI GGNCC 2 cut(s) 15, 256
PvuI CGATCG 1 cut(s) 465
RsaI GTAC 5 cut(s) 374, 458, 719, 785, 808
RsaNI GTAC 5 cut(s) 373, 457, 718, 784, 807
Rsr2I CGGWCCG 1 cut(s) 256
RsrII CGGWCCG 1 cut(s) 256
SaqAI TTAA 2 cut(s) 245, 597
SatI GCNGC 6 cut(s) 52, 103, 113, 636, 756, 801
Sau3AI GATC 3 cut(s) 21, 462, 774
Sau96I GGNCC 2 cut(s) 15, 256
SchI GAGTC 4 cut(s) 285, 564, 614, 719
ScrFI CCNGG 5 cut(s) 128, 238, 517, 617, 811
SinI GGWCC 2 cut(s) 15, 256
SphI GCATGC 1 cut(s) 674
Sse9I AATT 1 cut(s) 823
SspMI CTAG 2 cut(s) 42, 471
StyD4I CCNGG 5 cut(s) 126, 236, 515, 615, 809
StyI CCWWGG 3 cut(s) 41, 604, 690
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 2 cut(s) 245, 456
TaqI TCGA 3 cut(s) 47, 202, 465
TaqII GACCGA 2 cut(s) 273, 453
TasI AATT 1 cut(s) 823
TatI WGTACW 2 cut(s) 717, 783
TauI GCSGC 4 cut(s) 54, 105, 115, 758
TfiI GAWTC 2 cut(s) 591, 641
Tru1I TTAA 2 cut(s) 245, 597
Tru9I TTAA 2 cut(s) 245, 597
TseFI GTSAC 1 cut(s) 71
TseI GCWGC 2 cut(s) 635, 800
Tsp45I GTSAC 1 cut(s) 71
TspDTI ATGAA 3 cut(s) 524, 794, 830
TspGWI ACGGA 1 cut(s) 303
VpaK11BI GGWCC 2 cut(s) 15, 256
XagI CCTNNNNNAGG 1 cut(s) 694
XapI RAATTY 1 cut(s) 823
XceI RCATGY 1 cut(s) 674
XmaJI CCTAGG 1 cut(s) 41
XmnI GAANNNNTTC 1 cut(s) 181
XspI CTAG 2 cut(s) 42, 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.