Rmu_sc0002764.1_g000070

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002764.1
OG0000087
Physical Location & Seq
Forward (+)
265622 .. 267425
1804 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002764.1_g000070.1.cds

Sequence Viewer

Length: 1542 bp
atggaatcagaaaccaggggtggggataagggatcgttgtaccagtcttctgccaggcaagctgaagtggataacgatcggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcggagagcagtgaggagtccgacgagggtgagagcgagggtggatctgcggaggccctggtagtcacagtggcaattcccgagggcataccgaagacgaggtatacacttgcggatgggattgtatgcgacgaacacgggagaagtatgacgatgaaggagataatcgatttgcgactgaagtggggaataccggatgcgatggagcttaggcctctcagggatggagagatggccgtgaatcctgcctcggggtgggtggtgttgcacgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtacctgctgcggatgctgaacctgtcaccggggcagctgaccccgaacgccattcgccaagtatacagtatgatggccatgaagcagtcctgtgcgggtacggttacatttgctgctagggactacgaaccactaggtaccgacatgccctcttcgatgagcaaaaggtggaggaacaaggtattcctagctgggggacgatggcaaattaaaaataggaagtggcttctgactggtaccttccaagcaatcgggtaccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatacgctatttggtcagagaaggagaggagctcttatagattcatccggcattctaaactttataggctagggctagggtggctccccgtgaaagcgtcgaagaggaaacccaggaaaggtaaagaggaggacagaatggatgatgcgcagttgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacaagtcggtcagttgaagaaacccttctggacatcaccgatgaggggtatggtgaacccgatcccgacgctcccgtgacccacgtcgtgcagccctctatggccgacgttatcacgatagatgacaccgggactggaaaggtaccggcccttgtgcctatttcctctcgctctactgggagcgacgaggcattgctgcccggtgagaagaagagatcccataggcaccggcatcgaagtgataaggagaggcagaagaaggatcacccgggaccggagtcgtcgccgtcgcttggcctgttgtctcctaccgttccggtaatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccaatgaaaagttcgtgcggtccatgcttggtgacctgaaggatattgaccttggccgggttcgggtcaaagacaatacaccccaagagaatcgccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacgctattgacgccagcgaggaagatactcatctgaaggaggaggttagtaat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

514

Amino Acids

57.41

Weight (kDa)

6.32

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 912
Acc36I ACCTGC 1 cut(s) 471
Acc65I GGTACC 4 cut(s) 596, 695, 714, 1126
AccB1I GGYRCC 6 cut(s) 450, 596, 695, 714, 1126, 1209
AccI GTMKAC 4 cut(s) 242, 522, 765, 966
AciI CCGC 7 cut(s) 188, 251, 440, 469, 554, 1369, 1471
AclWI GGATC 7 cut(s) 40, 114, 127, 190, 1040, 1194, 1254
AcoI YGGCCR 4 cut(s) 372, 534, 1086, 1405
AcuI CTGAAG 3 cut(s) 84, 338, 1409
AcyI GRCGYC 2 cut(s) 948, 1500
AdeI CACNNNGTG 1 cut(s) 1072
AgsI TTSAA 2 cut(s) 1001, 1483
AhdI GACNNNNNGTC 1 cut(s) 973
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 5 cut(s) 14, 53, 195, 875, 936
AjuI GAANNNNNNNTTGG 2 cut(s) 1346, 1378
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 7 cut(s) 62, 346, 418, 496, 650, 795, 1330
AluI AGCT 7 cut(s) 62, 346, 418, 496, 650, 795, 1330
Alw21I GWGCWC 1 cut(s) 797
Alw26I GTCTC 1 cut(s) 1293
AlwI GGATC 7 cut(s) 40, 114, 127, 190, 1040, 1194, 1254
AlwNI CAGNNNCTG 1 cut(s) 463
Ama87I CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
ApeKI GCWGC 7 cut(s) 442, 466, 493, 572, 1075, 1180, 1327
Asp700I GAANNNNTTC 1 cut(s) 1008
Asp718I GGTACC 4 cut(s) 596, 695, 714, 1126
AspA2I CCTAGG 1 cut(s) 970
AspLEI GCGC 1 cut(s) 913
AspS9I GGNCC 5 cut(s) 193, 934, 1132, 1256, 1371
AsuHPI GGTGA 7 cut(s) 179, 477, 1012, 1049, 1199, 1241, 1394
AvaI CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
AvaII GGWCC 2 cut(s) 1256, 1371
AvrII CCTAGG 1 cut(s) 970
BaeGI GKGCMC 1 cut(s) 1477
BalI TGGCCA 1 cut(s) 536
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 6 cut(s) 450, 596, 695, 714, 1126, 1209
BanII GRGCYC 1 cut(s) 797
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 3 cut(s) 39, 239, 951
Bbv12I GWGCWC 1 cut(s) 797
BbvI GCAGC 7 cut(s) 429, 453, 505, 559, 1087, 1167, 1339
BccI CCATC 9 cut(s) 248, 334, 356, 364, 526, 654, 913, 925, 1328
BceAI ACGGC 3 cut(s) 359, 1255, 1431
BcgI CGANNNNNNTGC 2 cut(s) 1199, 1233
BciT130I CCWGG 5 cut(s) 16, 55, 197, 877, 938
BcoDI GTCTC 1 cut(s) 1293
BfaI CTAG 6 cut(s) 576, 593, 647, 833, 839, 971
BfmI CTRYAG 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 471
BisI GCNGC 7 cut(s) 443, 467, 494, 573, 1076, 1181, 1328
BlnI CCTAGG 1 cut(s) 970
BlsI GCNGC 7 cut(s) 444, 468, 495, 574, 1077, 1182, 1329
Bme18I GGWCC 2 cut(s) 1256, 1371
BmeRI GACNNNNNGTC 1 cut(s) 973
BmeT110I CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
BmgBI CACGTC 1 cut(s) 1069
BmgT120I GGNCC 5 cut(s) 193, 934, 1132, 1256, 1371
BmiI GGNNCC 9 cut(s) 121, 452, 598, 697, 716, 848, 1128, 1211, 1257
BmrI ACTGGG 2 cut(s) 138, 1170
BmsI GCATC 5 cut(s) 325, 462, 898, 1225, 1458
BmuI ACTGGG 2 cut(s) 138, 1170
BoxI GACNNNNGTC 2 cut(s) 1067, 1261
BpiI GAAGAC 3 cut(s) 39, 239, 951
BplI GAGNNNNNCTC 2 cut(s) 779, 811
Bpu10I CCTNAGC 1 cut(s) 347
Bsa29I ATCGAT 2 cut(s) 306, 960
BsaBI GATNNNNATC 2 cut(s) 75, 1518
BsaHI GRCGYC 2 cut(s) 948, 1500
BsaWI WCCGGW 3 cut(s) 331, 1258, 1300
Bse118I RCCGGY 2 cut(s) 1129, 1212
Bse1I ACTGG 6 cut(s) 43, 133, 697, 718, 1123, 1165
Bse3DI GCAATG 1 cut(s) 1175
Bse8I GATNNNNATC 2 cut(s) 75, 1518
BseBI CCWGG 5 cut(s) 16, 55, 197, 877, 938
BseCI ATCGAT 2 cut(s) 306, 960
BseGI GGATG 6 cut(s) 259, 340, 367, 477, 807, 910
BseJI GATNNNNATC 2 cut(s) 75, 1518
BseMI GCAATG 1 cut(s) 1175
BseMII CTCAG 1 cut(s) 370
BseNI ACTGG 6 cut(s) 43, 133, 697, 718, 1123, 1165
BseRI GAGGAG 3 cut(s) 167, 805, 905
BseSI GKGCMC 1 cut(s) 1477
BseXI GCAGC 7 cut(s) 429, 453, 505, 559, 1087, 1167, 1339
BseYI CCCAGC 1 cut(s) 650
BsgI GTGCAG 1 cut(s) 1094
Bsh1285I CGRYCG 1 cut(s) 79
BshNI GGYRCC 6 cut(s) 450, 596, 695, 714, 1126, 1209
BshVI ATCGAT 2 cut(s) 306, 960
BsiEI CGRYCG 1 cut(s) 79
BsiHKAI GWGCWC 1 cut(s) 797
BsiHKCI CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
BslFI GGGAC 4 cut(s) 593, 669, 1129, 1269
BsmAI GTCTC 1 cut(s) 1293
BsmFI GGGAC 4 cut(s) 593, 669, 1129, 1269
BsmI GAATGC 1 cut(s) 814
BsoBI CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
Bsp1286I GDGCHC 2 cut(s) 797, 1477
Bsp143I GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
BspACI CCGC 7 cut(s) 188, 251, 440, 469, 554, 1369, 1471
BspCNI CTCAG 1 cut(s) 369
BspDI ATCGAT 2 cut(s) 306, 960
BspLI GGNNCC 9 cut(s) 121, 452, 598, 697, 716, 848, 1128, 1211, 1257
BspMI ACCTGC 1 cut(s) 471
BspPI GGATC 7 cut(s) 40, 114, 127, 190, 1040, 1194, 1254
BspT107I GGYRCC 6 cut(s) 450, 596, 695, 714, 1126, 1209
BsrDI GCAATG 1 cut(s) 1175
BsrFI RCCGGY 2 cut(s) 1129, 1212
BsrI ACTGG 6 cut(s) 43, 133, 697, 718, 1123, 1165
BssAI RCCGGY 2 cut(s) 1129, 1212
BssMI GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
BssNAI GTATAC 3 cut(s) 243, 523, 766
BssNI GRCGYC 2 cut(s) 948, 1500
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 3 cut(s) 424, 970, 1402
Bst1107I GTATAC 3 cut(s) 243, 523, 766
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 5 cut(s) 16, 55, 197, 877, 938
Bst4CI ACNGT 5 cut(s) 208, 459, 527, 562, 1297
Bst6I CTCTTC 5 cut(s) 616, 743, 860, 1190, 1484
BstACI GRCGYC 2 cut(s) 948, 1500
BstC8I GCNNGC 3 cut(s) 60, 1473, 1504
BstDEI CTNAG 3 cut(s) 85, 347, 356
BstEII GGTNACC 1 cut(s) 1382
BstF5I GGATG 6 cut(s) 259, 340, 367, 477, 807, 910
BstHHI GCGC 1 cut(s) 913
BstKTI GATC 8 cut(s) 35, 79, 100, 122, 185, 1048, 1202, 1249
BstMAI GTCTC 1 cut(s) 1293
BstMBI GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 7 cut(s) 59, 442, 472, 844, 1324, 1375, 1499
BstNI CCWGG 5 cut(s) 16, 55, 197, 877, 938
BstNSI RCATGY 1 cut(s) 607
BstPAI GACNNNNGTC 2 cut(s) 1067, 1261
BstPI GGTNACC 1 cut(s) 1382
BstSFI CTRYAG 1 cut(s) 455
BstSLI GKGCMC 1 cut(s) 1477
BstV1I GCAGC 7 cut(s) 429, 453, 505, 559, 1087, 1167, 1339
BstV2I GAAGAC 3 cut(s) 39, 239, 951
BstX2I RGATCY 3 cut(s) 119, 182, 1199
BstYI RGATCY 3 cut(s) 119, 182, 1199
BstZ17I GTATAC 3 cut(s) 243, 523, 766
Bsu15I ATCGAT 2 cut(s) 306, 960
BsuTUI ATCGAT 2 cut(s) 306, 960
BtgZI GCGATG 1 cut(s) 353
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 6 cut(s) 259, 340, 367, 477, 807, 910
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 2 cut(s) 154, 213
BveI ACCTGC 1 cut(s) 471
Cac8I GCNNGC 3 cut(s) 60, 1473, 1504
CaiI CAGNNNCTG 1 cut(s) 463
CfoI GCGC 1 cut(s) 913
Cfr10I RCCGGY 2 cut(s) 1129, 1212
Cfr13I GGNCC 5 cut(s) 193, 934, 1132, 1256, 1371
Cfr9I CCCGGG 3 cut(s) 759, 1252, 1455
ClaI ATCGAT 2 cut(s) 306, 960
CseI GACGC 4 cut(s) 849, 956, 1061, 1508
CviAII CATG 4 cut(s) 538, 604, 1375, 1465
DdeI CTNAG 3 cut(s) 85, 347, 356
DpnI GATC 8 cut(s) 34, 78, 99, 121, 184, 1047, 1201, 1248
DpnII GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
DraIII CACNNNGTG 1 cut(s) 1072
DriI GACNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 4 cut(s) 372, 534, 1086, 1405
Eam1104I CTCTTC 5 cut(s) 616, 743, 860, 1190, 1484
Eam1105I GACNNNNNGTC 1 cut(s) 973
EarI CTCTTC 5 cut(s) 616, 743, 860, 1190, 1484
Ecl136II GAGCTC 1 cut(s) 795
Eco130I CCWWGG 3 cut(s) 424, 970, 1402
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 797
Eco47I GGWCC 2 cut(s) 1256, 1371
Eco53kI GAGCTC 1 cut(s) 795
Eco57I CTGAAG 3 cut(s) 84, 338, 1409
Eco88I CYCGRG 5 cut(s) 218, 388, 759, 1252, 1455
Eco91I GGTNACC 1 cut(s) 1382
EcoICRI GAGCTC 1 cut(s) 795
EcoO109I RGGNCCY 1 cut(s) 193
EcoO65I GGTNACC 1 cut(s) 1382
EcoRII CCWGG 5 cut(s) 14, 53, 195, 875, 936
EcoT14I CCWWGG 3 cut(s) 424, 970, 1402
EcoT38I GRGCYC 1 cut(s) 797
ErhI CCWWGG 3 cut(s) 424, 970, 1402
FaeI CATG 4 cut(s) 541, 607, 1378, 1468
FalI AAGNNNNNCTT 4 cut(s) 936, 968, 993, 1025
FaqI GGGAC 4 cut(s) 593, 669, 1129, 1269
FatI CATG 4 cut(s) 537, 603, 1374, 1464
FauI CCCGC 2 cut(s) 547, 1464
FblI GTMKAC 4 cut(s) 242, 522, 765, 966
Fnu4HI GCNGC 7 cut(s) 443, 467, 494, 573, 1076, 1181, 1328
FokI GGATG 6 cut(s) 266, 347, 374, 484, 794, 917
FriOI GRGCYC 1 cut(s) 797
Fsp4HI GCNGC 7 cut(s) 443, 467, 494, 573, 1076, 1181, 1328
FspBI CTAG 6 cut(s) 576, 593, 647, 833, 839, 971
FspI TGCGCA 1 cut(s) 912
GlaI GCGC 1 cut(s) 912
GluI GCNGC 7 cut(s) 443, 467, 494, 573, 1076, 1181, 1328
GsaI CCCAGC 1 cut(s) 654
HgaI GACGC 4 cut(s) 849, 956, 1061, 1508
HhaI GCGC 1 cut(s) 913
Hin1I GRCGYC 2 cut(s) 948, 1500
Hin1II CATG 4 cut(s) 541, 607, 1378, 1468
Hin6I GCGC 1 cut(s) 911
HinP1I GCGC 1 cut(s) 911
HincII GTYRAC 1 cut(s) 967
HindII GTYRAC 1 cut(s) 967
HinfI GANTC 8 cut(s) 5, 155, 379, 412, 804, 1262, 1441, 1460
HphI GGTGA 7 cut(s) 179, 477, 1012, 1049, 1199, 1241, 1394
Hpy166II GTNNAC 6 cut(s) 243, 523, 766, 967, 1040, 1489
Hpy188I TCNGA 7 cut(s) 10, 142, 160, 690, 736, 781, 1524
Hpy188III TCNNGA 4 cut(s) 218, 1013, 1049, 1099
Hpy8I GTNNAC 6 cut(s) 243, 523, 766, 967, 1040, 1489
Hpy99I CGWCG 9 cut(s) 164, 272, 865, 1055, 1073, 1094, 1172, 1270, 1276
HpyAV CCTTC 8 cut(s) 289, 709, 778, 962, 1019, 1237, 1384, 1519
HpyCH4III ACNGT 5 cut(s) 208, 459, 527, 562, 1297
HpyCH4IV ACGT 2 cut(s) 1068, 1092
HpyCH4V TGCA 2 cut(s) 406, 1075
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 442, 472, 844, 1324, 1375, 1499
HpyF3I CTNAG 3 cut(s) 85, 347, 356
HpySE526I ACGT 2 cut(s) 1068, 1092
Hsp92I GRCGYC 2 cut(s) 948, 1500
Hsp92II CATG 4 cut(s) 541, 607, 1378, 1468
HspAI GCGC 1 cut(s) 911
KpnI GGTACC 4 cut(s) 600, 699, 718, 1130
Kzo9I GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
LmnI GCTCC 6 cut(s) 343, 423, 792, 852, 1060, 1164
Lsp1109I GCAGC 7 cut(s) 429, 453, 505, 559, 1087, 1167, 1339
LweI GCATC 5 cut(s) 325, 462, 898, 1225, 1458
MaeI CTAG 6 cut(s) 576, 593, 647, 833, 839, 971
MaeII ACGT 2 cut(s) 1068, 1092
MaeIII GTNAC 5 cut(s) 202, 483, 562, 1060, 1382
MalI GATC 8 cut(s) 34, 78, 99, 121, 184, 1047, 1201, 1248
MboI GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
MflI RGATCY 3 cut(s) 119, 182, 1199
MhlI GDGCHC 2 cut(s) 797, 1477
MlsI TGGCCA 1 cut(s) 536
MluCI AATT 3 cut(s) 101, 213, 666
MluNI TGGCCA 1 cut(s) 536
MlyI GAGTC 2 cut(s) 164, 1271
MmeI TCCRAC 1 cut(s) 183
Mox20I TGGCCA 1 cut(s) 536
MroXI GAANNNNTTC 1 cut(s) 1008
MscI TGGCCA 1 cut(s) 536
MseI TTAA 1 cut(s) 669
MslI CAYNNNNRTG 2 cut(s) 960, 1221
Msp20I TGGCCA 1 cut(s) 536
MspA1I CMGCKG 3 cut(s) 442, 496, 1330
Mva1269I GAATGC 1 cut(s) 814
MvaI CCWGG 5 cut(s) 16, 55, 197, 877, 938
MwoI GCNNNNNNNGC 7 cut(s) 59, 442, 472, 844, 1324, 1375, 1499
NdeII GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
NlaIII CATG 4 cut(s) 541, 607, 1378, 1468
NlaIV GGNNCC 9 cut(s) 121, 452, 598, 697, 716, 848, 1128, 1211, 1257
NmeAIII GCCGAG 1 cut(s) 116
NmuCI GTSAC 4 cut(s) 202, 483, 1060, 1382
NsbI TGCGCA 1 cut(s) 912
NspI RCATGY 1 cut(s) 607
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PctI GAATGC 1 cut(s) 814
PdmI GAANNNNTTC 1 cut(s) 1008
PfeI GAWTC 6 cut(s) 5, 379, 412, 804, 1441, 1460
PkrI GCNGC 7 cut(s) 444, 468, 495, 574, 1077, 1182, 1329
Ple19I CGATCG 1 cut(s) 79
PleI GAGTC 2 cut(s) 163, 1270
PpsI GAGTC 2 cut(s) 163, 1270
PshAI GACNNNNGTC 2 cut(s) 1067, 1261
Psp124BI GAGCTC 1 cut(s) 797
Psp6I CCWGG 5 cut(s) 14, 53, 195, 875, 936
PspEI GGTNACC 1 cut(s) 1382
PspFI CCCAGC 1 cut(s) 650
PspGI CCWGG 5 cut(s) 14, 53, 195, 875, 936
PspN4I GGNNCC 9 cut(s) 121, 452, 598, 697, 716, 848, 1128, 1211, 1257
PspPI GGNCC 5 cut(s) 193, 934, 1132, 1256, 1371
PstNI CAGNNNCTG 1 cut(s) 463
PsuI RGATCY 3 cut(s) 119, 182, 1199
PvuI CGATCG 1 cut(s) 79
PvuII CAGCTG 2 cut(s) 496, 1330
RseI CAYNNNNRTG 2 cut(s) 960, 1221
SacI GAGCTC 1 cut(s) 797
SalI GTCGAC 1 cut(s) 965
SaqAI TTAA 1 cut(s) 669
SatI GCNGC 7 cut(s) 443, 467, 494, 573, 1076, 1181, 1328
Sau3AI GATC 8 cut(s) 32, 76, 97, 119, 182, 1045, 1199, 1246
Sau96I GGNCC 5 cut(s) 193, 934, 1132, 1256, 1371
SchI GAGTC 2 cut(s) 164, 1271
SduI GDGCHC 2 cut(s) 797, 1477
SfaNI GCATC 5 cut(s) 325, 462, 898, 1225, 1458
SfcI CTRYAG 1 cut(s) 455
SinI GGWCC 2 cut(s) 1256, 1371
SmaI CCCGGG 3 cut(s) 761, 1254, 1457
SmiMI CAYNNNNRTG 2 cut(s) 960, 1221
Sse9I AATT 3 cut(s) 101, 213, 666
SseBI AGGCCT 1 cut(s) 352
SsiI CCGC 7 cut(s) 188, 251, 440, 469, 554, 1369, 1471
SspMI CTAG 6 cut(s) 576, 593, 647, 833, 839, 971
SstI GAGCTC 1 cut(s) 797
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 3 cut(s) 424, 970, 1402
TaaI ACNGT 5 cut(s) 208, 459, 527, 562, 1297
TaiI ACGT 2 cut(s) 1071, 1095
TaqI TCGA 8 cut(s) 125, 306, 614, 863, 960, 966, 977, 1219
TaqII GACCGA 1 cut(s) 981
TasI AATT 3 cut(s) 101, 213, 666
TfiI GAWTC 6 cut(s) 5, 379, 412, 804, 1441, 1460
Tru1I TTAA 1 cut(s) 669
Tru9I TTAA 1 cut(s) 669
TscAI CASTG 2 cut(s) 154, 213
TseFI GTSAC 4 cut(s) 202, 483, 1060, 1382
TseI GCWGC 7 cut(s) 442, 466, 493, 572, 1075, 1180, 1327
Tsp45I GTSAC 4 cut(s) 202, 483, 1060, 1382
TspDTI ATGAA 4 cut(s) 308, 554, 796, 1371
TspMI CCCGGG 3 cut(s) 759, 1252, 1455
TspRI CASTG 2 cut(s) 154, 213
VpaK11BI GGWCC 2 cut(s) 1256, 1371
XceI RCATGY 1 cut(s) 607
XmaI CCCGGG 3 cut(s) 759, 1252, 1455
XmaJI CCTAGG 1 cut(s) 970
XmiI GTMKAC 4 cut(s) 242, 522, 765, 966
XmnI GAANNNNTTC 1 cut(s) 1008
XspI CTAG 6 cut(s) 576, 593, 647, 833, 839, 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.