Rmu_sc0000280.1_g000017

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000280.1
OG0000087
Physical Location & Seq
Forward (+)
87719 .. 90073
2355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000280.1_g000017.1.cds

Sequence Viewer

Length: 1827 bp
atgaatttctgggttttggataggctaacccctgtgcttctggttccagatatagcaagatttgaggtccccggtaccgtagttaggatggaatcagaagccaggagtggggatacgagatcgtcgtaccagtcctttgccaggcgagctgaaatggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcaactggggtgttctcggagagtagtggggagtcagacgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggactgtatgcgacgaacctgggagaagcatgacgatgaaggagattgtagacatgcggctgaagtgggggataccagacgcagtagagcttaggtctcttagggatggggagatggccacaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctatcaccggggcagctaaccccgaatgtcgttcgccaaatatatagtatgatggccatgtgggacctgtgccagcaagggtggccatccataaatgagttccgcgcggtacaccgggtactgtactctaggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgaccggtactttccaagctatcggggaccagtcctataagctatctgaagtagaaaagaagaggatagcccggccctccctggccgatgtcattacgatagctaaccccggggtgggaaaagtaccggccccagtgcctatttcttctcgttccactgggagcgatgaggtgttactccccggtgagaagaagagatcgcacaagcaccggcatcgagcagataaggaggtgacgtacactggccgggatgtccagggtacgagtgtgaagaggaaaaagaaagatcacccgggatcagggccgtcgccttcccttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaacactgggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggacattgacctcgaccgggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcgttgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcacgggaggaggtaaagaacgcccaggactccgagaaaaaggctgcagagtctgccgtctcttggaaggagaaagcaaactctctggaggattgccttcccacggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctcgatgctggatgctgcccaagataaggttgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcggccaagtccggtaccggtgggtctcagagtaccgatcgagataggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

608

Amino Acids

67.83

Weight (kDa)

7.19

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1366
Acc36I ACCTGC 1 cut(s) 1366
Acc65I GGTACC 3 cut(s) 74, 168, 1787
AccB1I GGYRCC 4 cut(s) 74, 168, 537, 1787
AccBSI CCGCTC 2 cut(s) 1420, 1765
AccI GTMKAC 2 cut(s) 183, 393
AccII CGCG 2 cut(s) 672, 674
AclWI GGATC 3 cut(s) 277, 1150, 1278
AcoI YGGCCR 9 cut(s) 297, 459, 621, 650, 930, 1090, 1443, 1704, 1776
AcsI RAATTY 2 cut(s) 4, 1727
AcuI CTGAAG 4 cut(s) 425, 915, 1295, 1367
AcyI GRCGYC 1 cut(s) 1323
AgeI ACCGGT 3 cut(s) 165, 851, 1790
AgsI TTSAA 1 cut(s) 1306
AjnI CCWGG 7 cut(s) 101, 140, 361, 927, 1101, 1515, 1743
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
Alw26I GTCTC 4 cut(s) 444, 1555, 1745, 1803
AlwI GGATC 3 cut(s) 277, 1150, 1278
AlwNI CAGNNNCTG 3 cut(s) 550, 1219, 1544
Ama87I CYCGRG 4 cut(s) 305, 475, 956, 1138
ApeKI GCWGC 9 cut(s) 490, 553, 580, 844, 1213, 1216, 1456, 1535, 1658
ApoI RAATTY 2 cut(s) 4, 1727
AsiGI ACCGGT 3 cut(s) 165, 851, 1790
Asp718I GGTACC 3 cut(s) 74, 168, 1787
AspA2I CCTAGG 1 cut(s) 172
AspLEI GCGC 2 cut(s) 490, 674
AspS9I GGNCC 9 cut(s) 67, 207, 280, 631, 874, 921, 976, 1148, 1257
AsuHPI GGTGA 8 cut(s) 266, 564, 733, 1043, 1090, 1127, 1390, 1490
AvaI CYCGRG 4 cut(s) 305, 475, 956, 1138
AvaII GGWCC 5 cut(s) 67, 207, 631, 874, 1257
AvrII CCTAGG 1 cut(s) 172
BaeGI GKGCMC 1 cut(s) 1300
BaeI ACNNNNGTAYC 4 cut(s) 66, 99, 1098, 1131
BalI TGGCCA 4 cut(s) 299, 461, 623, 652
BanI GGYRCC 4 cut(s) 74, 168, 537, 1787
BarI GAAGNNNNNNTAC 2 cut(s) 311, 343
BauI CACGAG 2 cut(s) 494, 1604
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 9 cut(s) 477, 540, 592, 856, 1203, 1225, 1468, 1522, 1645
BccI CCATC 8 cut(s) 82, 443, 451, 613, 661, 1214, 1325, 1435
BceAI ACGGC 4 cut(s) 1135, 1166, 1532, 1595
BcgI CGANNNNNNTGC 2 cut(s) 1043, 1077
BciT130I CCWGG 7 cut(s) 103, 142, 363, 929, 1103, 1517, 1745
BciVI GTATCC 2 cut(s) 106, 408
BcoDI GTCTC 4 cut(s) 444, 1555, 1745, 1803
BfaI CTAG 5 cut(s) 173, 696, 735, 752, 806
BfmI CTRYAG 2 cut(s) 542, 1536
BfoI RGCGCY 1 cut(s) 491
BfuAI ACCTGC 1 cut(s) 1366
BfuI GTATCC 2 cut(s) 106, 408
BlnI CCTAGG 1 cut(s) 172
Bme18I GGWCC 5 cut(s) 67, 207, 631, 874, 1257
BmeT110I CYCGRG 4 cut(s) 305, 475, 956, 1138
BmgT120I GGNCC 9 cut(s) 67, 207, 280, 631, 874, 921, 976, 1148, 1257
BmrI ACTGGG 4 cut(s) 225, 974, 1014, 1240
BmsI GCATC 4 cut(s) 549, 1069, 1638, 1645
BmuI ACTGGG 4 cut(s) 225, 974, 1014, 1240
BplI GAGNNNNNCTC 4 cut(s) 1409, 1441, 1628, 1660
BpmI CTGGAG 3 cut(s) 1430, 1598, 1766
Bpu10I CCTNAGC 2 cut(s) 434, 1488
BpuEI CTTGAG 1 cut(s) 1493
BsaBI GATNNNNATC 1 cut(s) 1341
BsaHI GRCGYC 1 cut(s) 1323
BsaI GGTCTC 3 cut(s) 444, 1745, 1803
BsaWI WCCGGW 5 cut(s) 165, 851, 1186, 1784, 1790
BsaXI ACNNNNNCTCC 4 cut(s) 1067, 1097, 1610, 1640
Bse118I RCCGGY 5 cut(s) 165, 851, 973, 1056, 1790
Bse1I ACTGG 7 cut(s) 130, 220, 877, 980, 1009, 1093, 1235
Bse8I GATNNNNATC 1 cut(s) 1341
BseBI CCWGG 7 cut(s) 103, 142, 363, 929, 1103, 1517, 1745
BseGI GGATG 7 cut(s) 93, 454, 564, 653, 1102, 1639, 1660
BseJI GATNNNNATC 1 cut(s) 1341
BseMII CTCAG 3 cut(s) 1428, 1479, 1814
BseNI ACTGG 7 cut(s) 130, 220, 877, 980, 1009, 1093, 1235
BseRI GAGGAG 3 cut(s) 1367, 1514, 1631
BseSI GKGCMC 1 cut(s) 1300
BseX3I CGGCCG 1 cut(s) 1704
BseXI GCAGC 9 cut(s) 477, 540, 592, 856, 1203, 1225, 1468, 1522, 1645
BsgI GTGCAG 1 cut(s) 476
Bsh1236I CGCG 2 cut(s) 672, 674
Bsh1285I CGRYCG 4 cut(s) 166, 1294, 1707, 1813
BshNI GGYRCC 4 cut(s) 74, 168, 537, 1787
BshTI ACCGGT 3 cut(s) 165, 851, 1790
BsiEI CGRYCG 4 cut(s) 166, 1294, 1707, 1813
BsiHKCI CYCGRG 4 cut(s) 305, 475, 956, 1138
BslFI GGGAC 5 cut(s) 53, 358, 644, 887, 1436
BsmAI GTCTC 4 cut(s) 444, 1555, 1745, 1803
BsmBI CGTCTC 1 cut(s) 1555
BsmFI GGGAC 5 cut(s) 53, 358, 644, 887, 1436
BsmI GAATGC 1 cut(s) 312
Bso31I GGTCTC 3 cut(s) 444, 1745, 1803
BsoBI CYCGRG 4 cut(s) 305, 475, 956, 1138
Bsp1286I GDGCHC 1 cut(s) 1300
Bsp143I GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
BspCNI CTCAG 3 cut(s) 1429, 1480, 1813
BspFNI CGCG 2 cut(s) 672, 674
BspHI TCATGA 1 cut(s) 1680
BspMAI CTGCAG 1 cut(s) 1540
BspMI ACCTGC 1 cut(s) 1366
BspPI GGATC 3 cut(s) 277, 1150, 1278
BspT107I GGYRCC 4 cut(s) 74, 168, 537, 1787
BspTNI GGTCTC 3 cut(s) 444, 1745, 1803
BsrBI CCGCTC 2 cut(s) 1420, 1765
BsrFI RCCGGY 5 cut(s) 165, 851, 973, 1056, 1790
BsrI ACTGG 7 cut(s) 130, 220, 877, 980, 1009, 1093, 1235
BssAI RCCGGY 5 cut(s) 165, 851, 973, 1056, 1790
BssMI GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
BssNI GRCGYC 1 cut(s) 1323
BssSI CACGAG 2 cut(s) 494, 1604
BssT1I CCWWGG 3 cut(s) 172, 511, 1162
Bst2BI CACGAG 2 cut(s) 494, 1604
Bst2UI CCWGG 7 cut(s) 103, 142, 363, 929, 1103, 1517, 1745
Bst4CI ACNGT 6 cut(s) 79, 295, 349, 546, 690, 721
Bst6I CTCTTC 4 cut(s) 902, 1034, 1112, 1307
BstACI GRCGYC 1 cut(s) 1323
BstAPI GCANNNNNTGC 1 cut(s) 1544
BstC8I GCNNGC 3 cut(s) 147, 641, 1327
BstDEI CTNAG 7 cut(s) 434, 443, 1437, 1452, 1488, 1714, 1800
BstDSI CCRYGG 2 cut(s) 1593, 1611
BstEII GGTNACC 1 cut(s) 721
BstENI CCTNNNNNAGG 1 cut(s) 139
BstF5I GGATG 7 cut(s) 93, 454, 564, 653, 1102, 1639, 1660
BstFNI CGCG 2 cut(s) 672, 674
BstH2I RGCGCY 1 cut(s) 491
BstHHI GCGC 2 cut(s) 490, 674
BstKTI GATC 7 cut(s) 122, 272, 1046, 1135, 1145, 1273, 1813
BstMAI GTCTC 4 cut(s) 444, 1555, 1745, 1803
BstMBI GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
BstMCI CGRYCG 4 cut(s) 166, 1294, 1707, 1813
BstMWI GCNNNNNNNGC 9 cut(s) 146, 529, 559, 649, 1210, 1261, 1322, 1442, 1544
BstNI CCWGG 7 cut(s) 103, 142, 363, 929, 1103, 1517, 1745
BstNSI RCATGY 1 cut(s) 400
BstPI GGTNACC 1 cut(s) 721
BstSFI CTRYAG 2 cut(s) 542, 1536
BstSLI GKGCMC 1 cut(s) 1300
BstUI CGCG 2 cut(s) 672, 674
BstV1I GCAGC 9 cut(s) 477, 540, 592, 856, 1203, 1225, 1468, 1522, 1645
BstX2I RGATCY 2 cut(s) 269, 1270
BstYI RGATCY 2 cut(s) 269, 1270
BstZI CGGCCG 1 cut(s) 1704
BsuI GTATCC 2 cut(s) 106, 408
BtgI CCRYGG 2 cut(s) 1593, 1611
BtgZI GCGATG 1 cut(s) 1026
BtsCI GGATG 7 cut(s) 93, 454, 564, 653, 1102, 1639, 1660
BtsIMutI CAGTG 5 cut(s) 300, 987, 1002, 1086, 1228
BveI ACCTGC 1 cut(s) 1366
Cac8I GCNNGC 3 cut(s) 147, 641, 1327
CaiI CAGNNNCTG 3 cut(s) 550, 1219, 1544
CciI TCATGA 1 cut(s) 1680
CfoI GCGC 2 cut(s) 490, 674
Cfr10I RCCGGY 5 cut(s) 165, 851, 973, 1056, 1790
Cfr13I GGNCC 9 cut(s) 67, 207, 280, 631, 874, 921, 976, 1148, 1257
Cfr9I CCCGGG 3 cut(s) 475, 956, 1138
CseI GACGC 2 cut(s) 431, 1331
CspAI ACCGGT 3 cut(s) 165, 851, 1790
CviAII CATG 6 cut(s) 373, 397, 625, 1261, 1391, 1681
DdeI CTNAG 7 cut(s) 434, 443, 1437, 1452, 1488, 1714, 1800
DpnI GATC 7 cut(s) 121, 271, 1045, 1134, 1144, 1272, 1812
DpnII GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
EaeI YGGCCR 9 cut(s) 297, 459, 621, 650, 930, 1090, 1443, 1704, 1776
EagI CGGCCG 1 cut(s) 1704
Eam1104I CTCTTC 4 cut(s) 902, 1034, 1112, 1307
EarI CTCTTC 4 cut(s) 902, 1034, 1112, 1307
EclXI CGGCCG 1 cut(s) 1704
Eco130I CCWWGG 3 cut(s) 172, 511, 1162
Eco31I GGTCTC 3 cut(s) 444, 1745, 1803
Eco47I GGWCC 5 cut(s) 67, 207, 631, 874, 1257
Eco52I CGGCCG 1 cut(s) 1704
Eco57I CTGAAG 4 cut(s) 425, 915, 1295, 1367
Eco88I CYCGRG 4 cut(s) 305, 475, 956, 1138
Eco91I GGTNACC 1 cut(s) 721
EcoNI CCTNNNNNAGG 1 cut(s) 139
EcoO109I RGGNCCY 4 cut(s) 67, 207, 280, 631
EcoO65I GGTNACC 1 cut(s) 721
EcoRII CCWGG 7 cut(s) 101, 140, 361, 927, 1101, 1515, 1743
EcoT14I CCWWGG 3 cut(s) 172, 511, 1162
ErhI CCWWGG 3 cut(s) 172, 511, 1162
Esp3I CGTCTC 1 cut(s) 1555
FaeI CATG 6 cut(s) 376, 400, 628, 1264, 1394, 1684
FaqI GGGAC 5 cut(s) 53, 358, 644, 887, 1436
FatI CATG 6 cut(s) 372, 396, 624, 1260, 1390, 1680
FauI CCCGC 5 cut(s) 706, 1186, 1413, 1728, 1758
FblI GTMKAC 2 cut(s) 183, 393
FokI GGATG 7 cut(s) 100, 461, 571, 640, 1109, 1646, 1667
FspBI CTAG 5 cut(s) 173, 696, 735, 752, 806
GlaI GCGC 2 cut(s) 489, 673
GsuI CTGGAG 3 cut(s) 1430, 1598, 1766
HaeII RGCGCY 1 cut(s) 491
HgaI GACGC 2 cut(s) 431, 1331
HhaI GCGC 2 cut(s) 490, 674
Hin1I GRCGYC 1 cut(s) 1323
Hin1II CATG 6 cut(s) 376, 400, 628, 1264, 1394, 1684
Hin6I GCGC 2 cut(s) 488, 672
HinP1I GCGC 2 cut(s) 488, 672
HinfI GANTC 6 cut(s) 92, 242, 499, 1424, 1520, 1541
HphI GGTGA 8 cut(s) 266, 564, 733, 1043, 1090, 1127, 1390, 1490
Hpy166II GTNNAC 6 cut(s) 184, 330, 394, 679, 1086, 1312
Hpy188III TCNNGA 6 cut(s) 47, 305, 1577, 1645, 1681, 1814
Hpy8I GTNNAC 6 cut(s) 184, 330, 394, 679, 1086, 1312
Hpy99I CGWCG 4 cut(s) 127, 359, 1156, 1325
HpyAV CCTTC 9 cut(s) 376, 1167, 1270, 1342, 1393, 1408, 1552, 1598, 1753
HpyCH4III ACNGT 6 cut(s) 79, 295, 349, 546, 690, 721
HpyCH4IV ACGT 1 cut(s) 1082
HpyCH4V TGCA 2 cut(s) 493, 1538
HpyF10VI GCNNNNNNNGC 9 cut(s) 146, 529, 559, 649, 1210, 1261, 1322, 1442, 1544
HpyF3I CTNAG 7 cut(s) 434, 443, 1437, 1452, 1488, 1714, 1800
HpySE526I ACGT 1 cut(s) 1082
Hsp92I GRCGYC 1 cut(s) 1323
Hsp92II CATG 6 cut(s) 376, 400, 628, 1264, 1394, 1684
HspAI GCGC 2 cut(s) 488, 672
KpnI GGTACC 3 cut(s) 78, 172, 1791
Kzo9I GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
LmnI GCTCC 5 cut(s) 510, 1008, 1417, 1468, 1762
Lsp1109I GCAGC 9 cut(s) 477, 540, 592, 856, 1203, 1225, 1468, 1522, 1645
LweI GCATC 4 cut(s) 549, 1069, 1638, 1645
MaeI CTAG 5 cut(s) 173, 696, 735, 752, 806
MaeII ACGT 1 cut(s) 1082
MaeIII GTNAC 5 cut(s) 289, 721, 754, 1020, 1078
MalI GATC 7 cut(s) 121, 271, 1045, 1134, 1144, 1272, 1812
MbiI CCGCTC 2 cut(s) 1420, 1765
MboI GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
MboII GAAGA 9 cut(s) 919, 984, 1048, 1051, 1129, 1294, 1346, 1379, 1768
MflI RGATCY 2 cut(s) 269, 1270
MhlI GDGCHC 1 cut(s) 1300
MlsI TGGCCA 4 cut(s) 299, 461, 623, 652
MluCI AATT 3 cut(s) 4, 188, 1727
MluNI TGGCCA 4 cut(s) 299, 461, 623, 652
MlyI GAGTC 4 cut(s) 251, 1418, 1514, 1550
Mox20I TGGCCA 4 cut(s) 299, 461, 623, 652
MscI TGGCCA 4 cut(s) 299, 461, 623, 652
MseI TTAA 1 cut(s) 1689
MslI CAYNNNNRTG 1 cut(s) 377
Msp20I TGGCCA 4 cut(s) 299, 461, 623, 652
MspA1I CMGCKG 3 cut(s) 847, 1216, 1459
Mva1269I GAATGC 1 cut(s) 312
MvaI CCWGG 7 cut(s) 103, 142, 363, 929, 1103, 1517, 1745
MvnI CGCG 2 cut(s) 672, 674
MwoI GCNNNNNNNGC 9 cut(s) 146, 529, 559, 649, 1210, 1261, 1322, 1442, 1544
NdeII GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
NlaIII CATG 6 cut(s) 376, 400, 628, 1264, 1394, 1684
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 2 cut(s) 721, 1078
NspI RCATGY 1 cut(s) 400
PagI TCATGA 1 cut(s) 1680
PaqCI CACCTGC 1 cut(s) 1366
PcsI WCGNNNNNNNCGW 2 cut(s) 122, 1326
PctI GAATGC 1 cut(s) 312
PfeI GAWTC 2 cut(s) 92, 499
PfoI TCCNGGA 1 cut(s) 1743
PinAI ACCGGT 3 cut(s) 165, 851, 1790
Ple19I CGATCG 1 cut(s) 1813
PleI GAGTC 4 cut(s) 250, 1418, 1514, 1549
PpsI GAGTC 4 cut(s) 250, 1418, 1514, 1549
PpuMI RGGWCCY 3 cut(s) 67, 207, 631
Psp5II RGGWCCY 3 cut(s) 67, 207, 631
Psp6I CCWGG 7 cut(s) 101, 140, 361, 927, 1101, 1515, 1743
PspEI GGTNACC 1 cut(s) 721
PspGI CCWGG 7 cut(s) 101, 140, 361, 927, 1101, 1515, 1743
PspPI GGNCC 9 cut(s) 67, 207, 280, 631, 874, 921, 976, 1148, 1257
PspPPI RGGWCCY 3 cut(s) 67, 207, 631
PstI CTGCAG 1 cut(s) 1540
PstNI CAGNNNCTG 3 cut(s) 550, 1219, 1544
PsuI RGATCY 2 cut(s) 269, 1270
PvuI CGATCG 1 cut(s) 1813
PvuII CAGCTG 2 cut(s) 847, 1216
RseI CAYNNNNRTG 1 cut(s) 377
SaqAI TTAA 1 cut(s) 1689
Sau3AI GATC 7 cut(s) 119, 269, 1043, 1132, 1142, 1270, 1810
Sau96I GGNCC 9 cut(s) 67, 207, 280, 631, 874, 921, 976, 1148, 1257
SchI GAGTC 4 cut(s) 251, 1418, 1514, 1550
SduI GDGCHC 1 cut(s) 1300
SfaNI GCATC 4 cut(s) 549, 1069, 1638, 1645
SfcI CTRYAG 2 cut(s) 542, 1536
SinI GGWCC 5 cut(s) 67, 207, 631, 874, 1257
SmaI CCCGGG 3 cut(s) 477, 958, 1140
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 1 cut(s) 1472
SmoI CTYRAG 1 cut(s) 1472
Sse9I AATT 3 cut(s) 4, 188, 1727
SspMI CTAG 5 cut(s) 173, 696, 735, 752, 806
StyI CCWWGG 3 cut(s) 172, 511, 1162
TaaI ACNGT 6 cut(s) 79, 295, 349, 546, 690, 721
TaiI ACGT 1 cut(s) 1085
TaqI TCGA 7 cut(s) 162, 773, 1063, 1290, 1320, 1646, 1813
TasI AATT 3 cut(s) 4, 188, 1727
TatI WGTACW 2 cut(s) 690, 1620
TauI GCSGC 7 cut(s) 403, 734, 751, 1448, 1706, 1775, 1778
TfiI GAWTC 2 cut(s) 92, 499
Tru1I TTAA 1 cut(s) 1689
Tru9I TTAA 1 cut(s) 1689
TscAI CASTG 5 cut(s) 300, 987, 1009, 1093, 1235
TseFI GTSAC 2 cut(s) 721, 1078
TseI GCWGC 9 cut(s) 490, 553, 580, 844, 1213, 1216, 1456, 1535, 1658
Tsp45I GTSAC 2 cut(s) 721, 1078
TspDTI ATGAA 7 cut(s) 17, 395, 1239, 1257, 1379, 1697, 1734
TspGWI ACGGA 1 cut(s) 1610
TspMI CCCGGG 3 cut(s) 475, 956, 1138
TspRI CASTG 5 cut(s) 300, 987, 1009, 1093, 1235
VpaK11BI GGWCC 5 cut(s) 67, 207, 631, 874, 1257
XagI CCTNNNNNAGG 1 cut(s) 139
XapI RAATTY 2 cut(s) 4, 1727
XceI RCATGY 1 cut(s) 400
XmaI CCCGGG 3 cut(s) 475, 956, 1138
XmaJI CCTAGG 1 cut(s) 172
XmiI GTMKAC 2 cut(s) 183, 393
XspI CTAG 5 cut(s) 173, 696, 735, 752, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.