Rmu_sc0004336.1_g000039

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004336.1
OG0000087
Physical Location & Seq
Forward (+)
147862 .. 148535
674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004336.1_g000039.1.cds

Sequence Viewer

Length: 564 bp
atgcgctctatgcttgccgatttgaaggatatagacctcgatcaggtacgggcgaaggacaataccccgcaagagaatcgtcgcctcgcccgggaatcactaatgcggtcactgttcaacgtgtacgctattgacgctagtgaggaagatacgtacttgaaggaggaggttaacagtctctccgggaaagtgaagtatcttcacggggagaagggcaagctggagaaggagcgggacctattgaagaagaaggtagagtccttaagtcccctggtgattgagctggaggcagcgaagcaacggatcgccgagctcgaaggtgagttatccggggcaaggaacgaggttaagagtgccggggactccgagagcctggaggagcgtcttcctatggaaaggcaagaggccgttgccgaataccaaggttcccaagagctgattgacatgttgctgaaggcgcaggacaaggccgtgatcatgaagtacagagagtgggtggcagccgggtacttagatgaggccaagttcaggcgggggctccttgagaagaagaagaaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

187

Amino Acids

21.46

Weight (kDa)

5.43

Isoelectric Point (pI)

35.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 232
AciI CCGC 4 cut(s) 68, 106, 232, 532
AclWI GGATC 1 cut(s) 311
AcuI CTGAAG 1 cut(s) 473
AfaI GTAC 5 cut(s) 48, 125, 155, 485, 509
AfiI CCNNNNNNNGG 4 cut(s) 43, 91, 336, 528
AflII CTTAAG 1 cut(s) 262
AflIII ACRYGT 2 cut(s) 120, 444
AgsI TTSAA 4 cut(s) 25, 118, 160, 244
AjnI CCWGG 2 cut(s) 270, 372
AluBI AGCT 4 cut(s) 220, 283, 313, 436
AluI AGCT 4 cut(s) 220, 283, 313, 436
Alw21I GWGCWC 1 cut(s) 315
Alw26I GTCTC 1 cut(s) 182
AlwI GGATC 1 cut(s) 311
Ama87I CYCGRG 1 cut(s) 90
AoxI GGCC 3 cut(s) 405, 468, 519
ApeKI GCWGC 2 cut(s) 290, 500
AspLEI GCGC 2 cut(s) 6, 460
AspS9I GGNCC 1 cut(s) 235
AsuC2I CCSGG 6 cut(s) 91, 92, 184, 331, 358, 505
AsuHPI GGTGA 2 cut(s) 286, 332
AvaI CYCGRG 1 cut(s) 90
AvaII GGWCC 1 cut(s) 235
BanII GRGCYC 2 cut(s) 315, 540
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 315
BbvI GCAGC 2 cut(s) 302, 512
BceAI ACGGC 2 cut(s) 392, 455
BcgI CGANNNNNNTGC 2 cut(s) 59, 93
BciT130I CCWGG 2 cut(s) 272, 374
BclI TGATCA 1 cut(s) 474
BcnI CCSGG 6 cut(s) 91, 92, 184, 331, 358, 505
BcoDI GTCTC 1 cut(s) 182
BfaI CTAG 1 cut(s) 138
BfrI CTTAAG 1 cut(s) 262
BisI GCNGC 2 cut(s) 291, 501
BlsI GCNGC 2 cut(s) 292, 502
Bme1390I CCNGG 8 cut(s) 91, 92, 184, 272, 331, 358, 374, 505
Bme18I GGWCC 1 cut(s) 235
BmeT110I CYCGRG 1 cut(s) 90
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 3 cut(s) 236, 427, 539
BmrFI CCNGG 8 cut(s) 91, 92, 184, 272, 331, 358, 374, 505
BpiI GAAGAC 1 cut(s) 377
BpmI CTGGAG 3 cut(s) 242, 305, 395
BpuEI CTTGAG 1 cut(s) 563
BpuMI CCSGG 6 cut(s) 91, 92, 184, 331, 358, 505
BsaAI YACGTR 1 cut(s) 153
BsaJI CCNNGG 5 cut(s) 90, 270, 330, 357, 421
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 91, 336, 528
BseBI CCWGG 2 cut(s) 272, 374
BseDI CCNNGG 5 cut(s) 90, 270, 330, 357, 421
BseLI CCNNNNNNNGG 4 cut(s) 43, 91, 336, 528
BseRI GAGGAG 2 cut(s) 179, 392
BseXI GCAGC 2 cut(s) 302, 512
BshFI GGCC 3 cut(s) 407, 470, 521
BsiHKAI GWGCWC 1 cut(s) 315
BsiHKCI CYCGRG 1 cut(s) 90
BsiSI CCGG 5 cut(s) 91, 183, 330, 357, 504
BslFI GGGAC 3 cut(s) 248, 252, 374
BslI CCNNNNNNNGG 4 cut(s) 43, 91, 336, 528
BsmAI GTCTC 1 cut(s) 182
BsmFI GGGAC 3 cut(s) 248, 252, 374
BsnI GGCC 3 cut(s) 407, 470, 521
BsoBI CYCGRG 1 cut(s) 90
Bsp1286I GDGCHC 2 cut(s) 315, 540
Bsp143I GATC 3 cut(s) 40, 303, 474
BspACI CCGC 4 cut(s) 68, 106, 232, 532
BspANI GGCC 3 cut(s) 407, 470, 521
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 3 cut(s) 236, 427, 539
BspPI GGATC 1 cut(s) 311
BspTI CTTAAG 1 cut(s) 262
BsrBI CCGCTC 1 cut(s) 232
BssECI CCNNGG 5 cut(s) 90, 270, 330, 357, 421
BssMI GATC 3 cut(s) 40, 303, 474
BssT1I CCWWGG 1 cut(s) 421
Bst2UI CCWGG 2 cut(s) 272, 374
Bst4CI ACNGT 2 cut(s) 114, 176
BstAFI CTTAAG 1 cut(s) 262
BstBAI YACGTR 1 cut(s) 153
BstC8I GCNNGC 2 cut(s) 15, 218
BstDEI CTNAG 1 cut(s) 511
BstENI CCTNNNNNAGG 1 cut(s) 41
BstHHI GCGC 2 cut(s) 6, 460
BstKTI GATC 3 cut(s) 43, 306, 477
BstMAI GTCTC 1 cut(s) 182
BstMBI GATC 3 cut(s) 40, 303, 474
BstMWI GCNNNNNNNGC 3 cut(s) 10, 134, 457
BstNI CCWGG 2 cut(s) 272, 374
BstNSI RCATGY 1 cut(s) 448
BstSCI CCNGG 8 cut(s) 89, 90, 182, 270, 329, 356, 372, 503
BstSNI TACGTA 1 cut(s) 153
BstV1I GCAGC 2 cut(s) 302, 512
BstV2I GAAGAC 1 cut(s) 377
BsuRI GGCC 3 cut(s) 407, 470, 521
BtsIMutI CAGTG 1 cut(s) 110
Cac8I GCNNGC 2 cut(s) 15, 218
CciI TCATGA 1 cut(s) 477
CfoI GCGC 2 cut(s) 6, 460
Cfr13I GGNCC 1 cut(s) 235
Cfr9I CCCGGG 1 cut(s) 90
CseI GACGC 2 cut(s) 143, 371
Csp6I GTAC 5 cut(s) 47, 124, 154, 484, 508
CviAII CATG 2 cut(s) 445, 478
CviQI GTAC 5 cut(s) 47, 124, 154, 484, 508
DdeI CTNAG 1 cut(s) 511
DpnI GATC 3 cut(s) 42, 305, 476
DpnII GATC 3 cut(s) 40, 303, 474
Ecl136II GAGCTC 1 cut(s) 313
Eco105I TACGTA 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 421
Eco24I GRGCYC 2 cut(s) 315, 540
Eco47I GGWCC 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 313
Eco57I CTGAAG 1 cut(s) 473
Eco88I CYCGRG 1 cut(s) 90
EcoICRI GAGCTC 1 cut(s) 313
EcoNI CCTNNNNNAGG 1 cut(s) 41
EcoO109I RGGNCCY 1 cut(s) 235
EcoRII CCWGG 2 cut(s) 270, 372
EcoT14I CCWWGG 1 cut(s) 421
EcoT38I GRGCYC 2 cut(s) 315, 540
ErhI CCWWGG 1 cut(s) 421
FaeI CATG 2 cut(s) 448, 481
FaiI YATR 5 cut(s) 11, 32, 392, 446, 479
FaqI GGGAC 3 cut(s) 248, 252, 374
FatI CATG 2 cut(s) 444, 477
FauI CCCGC 3 cut(s) 75, 225, 525
FbaI TGATCA 1 cut(s) 474
Fnu4HI GCNGC 2 cut(s) 291, 501
FriOI GRGCYC 2 cut(s) 315, 540
Fsp4HI GCNGC 2 cut(s) 291, 501
FspBI CTAG 1 cut(s) 138
GlaI GCGC 2 cut(s) 5, 459
GluI GCNGC 2 cut(s) 291, 501
GsuI CTGGAG 3 cut(s) 242, 305, 395
HaeIII GGCC 3 cut(s) 407, 470, 521
HapII CCGG 5 cut(s) 91, 183, 330, 357, 504
HgaI GACGC 2 cut(s) 143, 371
HhaI GCGC 2 cut(s) 6, 460
Hin1II CATG 2 cut(s) 448, 481
Hin6I GCGC 2 cut(s) 4, 458
HinP1I GCGC 2 cut(s) 4, 458
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 4 cut(s) 76, 95, 257, 362
HpaI GTTAAC 1 cut(s) 172
HpaII CCGG 5 cut(s) 91, 183, 330, 357, 504
HphI GGTGA 2 cut(s) 286, 332
Hpy166II GTNNAC 2 cut(s) 124, 172
Hpy188I TCNGA 1 cut(s) 367
Hpy188III TCNNGA 1 cut(s) 478
Hpy8I GTNNAC 2 cut(s) 124, 172
Hpy99I CGWCG 1 cut(s) 84
HpyAV CCTTC 9 cut(s) 19, 49, 154, 205, 220, 244, 311, 448, 550
HpyCH4III ACNGT 2 cut(s) 114, 176
HpyCH4IV ACGT 2 cut(s) 120, 152
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 134, 457
HpyF3I CTNAG 1 cut(s) 511
HpySE526I ACGT 2 cut(s) 120, 152
Hsp92II CATG 2 cut(s) 448, 481
HspAI GCGC 2 cut(s) 4, 458
Ksp22I TGATCA 1 cut(s) 474
KspAI GTTAAC 1 cut(s) 172
Kzo9I GATC 3 cut(s) 40, 303, 474
LmnI GCTCC 3 cut(s) 229, 379, 543
Lsp1109I GCAGC 2 cut(s) 302, 512
MaeI CTAG 1 cut(s) 138
MaeII ACGT 2 cut(s) 120, 152
MaeIII GTNAC 1 cut(s) 108
MalI GATC 3 cut(s) 42, 305, 476
MbiI CCGCTC 1 cut(s) 232
MboI GATC 3 cut(s) 40, 303, 474
MboII GAAGA 7 cut(s) 158, 191, 256, 259, 377, 559, 562
MhlI GDGCHC 2 cut(s) 315, 540
MlyI GAGTC 2 cut(s) 266, 356
MseI TTAA 3 cut(s) 171, 263, 348
MspCI CTTAAG 1 cut(s) 262
MspI CCGG 5 cut(s) 91, 183, 330, 357, 504
MspR9I CCNGG 8 cut(s) 91, 92, 184, 272, 331, 358, 374, 505
MvaI CCWGG 2 cut(s) 272, 374
MwoI GCNNNNNNNGC 3 cut(s) 10, 134, 457
NciI CCSGG 6 cut(s) 91, 92, 184, 331, 358, 505
NdeII GATC 3 cut(s) 40, 303, 474
NlaIII CATG 2 cut(s) 448, 481
NlaIV GGNNCC 3 cut(s) 236, 427, 539
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 1 cut(s) 108
NspI RCATGY 1 cut(s) 448
PagI TCATGA 1 cut(s) 477
PciI ACATGT 1 cut(s) 444
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PfeI GAWTC 2 cut(s) 76, 95
PfoI TCCNGGA 1 cut(s) 182
PkrI GCNGC 2 cut(s) 292, 502
PleI GAGTC 2 cut(s) 265, 356
PpsI GAGTC 2 cut(s) 265, 356
Ppu21I YACGTR 1 cut(s) 153
PpuMI RGGWCCY 1 cut(s) 235
PscI ACATGT 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 315
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 2 cut(s) 270, 372
PspGI CCWGG 2 cut(s) 270, 372
PspN4I GGNNCC 3 cut(s) 236, 427, 539
PspPI GGNCC 1 cut(s) 235
PspPPI RGGWCCY 1 cut(s) 235
RsaI GTAC 5 cut(s) 48, 125, 155, 485, 509
RsaNI GTAC 5 cut(s) 47, 124, 154, 484, 508
SacI GAGCTC 1 cut(s) 315
SaqAI TTAA 3 cut(s) 171, 263, 348
SatI GCNGC 2 cut(s) 291, 501
Sau3AI GATC 3 cut(s) 40, 303, 474
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 2 cut(s) 266, 356
ScrFI CCNGG 8 cut(s) 91, 92, 184, 272, 331, 358, 374, 505
SduI GDGCHC 2 cut(s) 315, 540
SinI GGWCC 1 cut(s) 235
SmaI CCCGGG 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 262, 542
SmoI CTYRAG 2 cut(s) 262, 542
SnaBI TACGTA 1 cut(s) 153
SsiI CCGC 4 cut(s) 68, 106, 232, 532
SspMI CTAG 1 cut(s) 138
SstI GAGCTC 1 cut(s) 315
StyD4I CCNGG 8 cut(s) 89, 90, 182, 270, 329, 356, 372, 503
StyI CCWWGG 1 cut(s) 421
TaaI ACNGT 2 cut(s) 114, 176
TaiI ACGT 2 cut(s) 123, 155
TaqI TCGA 2 cut(s) 39, 315
TatI WGTACW 1 cut(s) 483
TfiI GAWTC 2 cut(s) 76, 95
Tru1I TTAA 3 cut(s) 171, 263, 348
Tru9I TTAA 3 cut(s) 171, 263, 348
TscAI CASTG 1 cut(s) 117
TseFI GTSAC 1 cut(s) 108
TseI GCWGC 2 cut(s) 290, 500
Tsp45I GTSAC 1 cut(s) 108
TspDTI ATGAA 1 cut(s) 494
TspGWI ACGGA 1 cut(s) 316
TspMI CCCGGG 1 cut(s) 90
TspRI CASTG 1 cut(s) 117
Vha464I CTTAAG 1 cut(s) 262
VpaK11BI GGWCC 1 cut(s) 235
XagI CCTNNNNNAGG 1 cut(s) 41
XceI RCATGY 1 cut(s) 448
XmaI CCCGGG 1 cut(s) 90
XspI CTAG 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.