Rmu_sc0005292.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005292.1
OG0000087
Physical Location & Seq
Reverse (-)
143259 .. 143894
636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005292.1_g000032.1.cds

Sequence Viewer

Length: 636 bp
atgaacttctgggtatttatgggttttggcttgaatttctgggttttggttaggctaacccttgtgcttctggttccagatatagcaagatttgaggttcccggtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcctctgccaggcaagctgaagtggatatcgaccggtacttaggccgagtagatcaattagcagagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtcggacgagggtgacagcgagggtggatatgcggaggccccggtagtcacagtggccattcccgaggggattccgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgcgactgaggtgggggataccggacgcggtggagcttaggcctctcagggatggagagatggccgcaaatcctgccccggggtgggtggcgttgcacgagaatcagttccaccaagggttatcgctaccgctgccccggtgcctacagtatctgttgcggatgctgaacctgtcaccggggcagttgaccccgaatgccattcgctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

211

Amino Acids

23.23

Weight (kDa)

4.65

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 104
AccB1I GGYRCC 2 cut(s) 104, 567
AccI GTMKAC 1 cut(s) 359
AccII CGCG 1 cut(s) 455
AciI CCGC 6 cut(s) 305, 368, 455, 492, 557, 586
AclWI GGATC 1 cut(s) 157
AcoI YGGCCR 2 cut(s) 327, 489
AcsI RAATTY 1 cut(s) 34
AcuI CTGAAG 1 cut(s) 201
AfaI GTAC 3 cut(s) 106, 158, 200
AfiI CCNNNNNNNGG 8 cut(s) 114, 138, 171, 246, 506, 510, 511, 604
AgeI ACCGGT 1 cut(s) 195
AgsI TTSAA 1 cut(s) 34
AjnI CCWGG 2 cut(s) 131, 170
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
AluBI AGCT 2 cut(s) 179, 463
AluI AGCT 2 cut(s) 179, 463
AlwI GGATC 1 cut(s) 157
AlwNI CAGNNNCTG 1 cut(s) 580
Ama87I CYCGRG 3 cut(s) 335, 392, 505
AoxI GGCC 5 cut(s) 205, 309, 327, 467, 489
ApeKI GCWGC 1 cut(s) 559
ApoI RAATTY 1 cut(s) 34
AsiGI ACCGGT 1 cut(s) 195
Asp700I GAANNNNTTC 1 cut(s) 533
Asp718I GGTACC 1 cut(s) 104
AspS9I GGNCC 3 cut(s) 237, 310, 375
AsuC2I CCSGG 8 cut(s) 102, 314, 393, 394, 506, 507, 565, 606
AsuHPI GGTGA 2 cut(s) 296, 594
AvaI CYCGRG 3 cut(s) 335, 392, 505
AvaII GGWCC 2 cut(s) 237, 375
BaeI ACNNNNGTAYC 2 cut(s) 96, 129
BalI TGGCCA 1 cut(s) 329
BanI GGYRCC 2 cut(s) 104, 567
BauI CACGAG 1 cut(s) 524
BbvI GCAGC 1 cut(s) 546
BccI CCATC 4 cut(s) 112, 365, 473, 481
BciT130I CCWGG 2 cut(s) 133, 172
BciVI GTATCC 2 cut(s) 136, 438
BcnI CCSGG 8 cut(s) 102, 314, 393, 394, 506, 507, 565, 606
BfmI CTRYAG 1 cut(s) 572
BfuI GTATCC 2 cut(s) 136, 438
BisI GCNGC 2 cut(s) 492, 560
BlsI GCNGC 2 cut(s) 493, 561
Bme18I GGWCC 2 cut(s) 237, 375
BmeT110I CYCGRG 3 cut(s) 335, 392, 505
BmgT120I GGNCC 3 cut(s) 237, 310, 375
BmiI GGNNCC 7 cut(s) 75, 99, 106, 238, 312, 376, 569
BmrI ACTGGG 1 cut(s) 255
BmsI GCATC 1 cut(s) 579
BmuI ACTGGG 1 cut(s) 255
Bpu10I CCTNAGC 1 cut(s) 464
BpuMI CCSGG 8 cut(s) 102, 314, 393, 394, 506, 507, 565, 606
BsaWI WCCGGW 2 cut(s) 195, 448
Bsc4I CCNNNNNNNGG 8 cut(s) 114, 138, 171, 246, 506, 510, 511, 604
Bse118I RCCGGY 1 cut(s) 195
Bse1I ACTGG 2 cut(s) 160, 250
BseBI CCWGG 2 cut(s) 133, 172
BseGI GGATG 4 cut(s) 123, 376, 484, 594
BseLI CCNNNNNNNGG 8 cut(s) 114, 138, 171, 246, 506, 510, 511, 604
BseMII CTCAG 2 cut(s) 425, 487
BseNI ACTGG 2 cut(s) 160, 250
BseRI GAGGAG 1 cut(s) 284
BseXI GCAGC 1 cut(s) 546
Bsh1236I CGCG 1 cut(s) 455
Bsh1285I CGRYCG 1 cut(s) 196
BshFI GGCC 5 cut(s) 207, 311, 329, 469, 491
BshNI GGYRCC 2 cut(s) 104, 567
BshTI ACCGGT 1 cut(s) 195
BsiEI CGRYCG 1 cut(s) 196
BsiHKCI CYCGRG 3 cut(s) 335, 392, 505
BsiSI CCGG 8 cut(s) 102, 196, 314, 393, 449, 506, 565, 605
BslFI GGGAC 1 cut(s) 388
BslI CCNNNNNNNGG 8 cut(s) 114, 138, 171, 246, 506, 510, 511, 604
BsmFI GGGAC 1 cut(s) 388
BsmI GAATGC 1 cut(s) 628
BsnI GGCC 5 cut(s) 207, 311, 329, 469, 491
BsoBI CYCGRG 3 cut(s) 335, 392, 505
Bsp143I GATC 3 cut(s) 149, 214, 417
BspACI CCGC 6 cut(s) 305, 368, 455, 492, 557, 586
BspANI GGCC 5 cut(s) 207, 311, 329, 469, 491
BspCNI CTCAG 2 cut(s) 426, 486
BspFNI CGCG 1 cut(s) 455
BspLI GGNNCC 7 cut(s) 75, 99, 106, 238, 312, 376, 569
BspPI GGATC 1 cut(s) 157
BspT107I GGYRCC 2 cut(s) 104, 567
BsrFI RCCGGY 1 cut(s) 195
BsrI ACTGG 2 cut(s) 160, 250
BssAI RCCGGY 1 cut(s) 195
BssMI GATC 3 cut(s) 149, 214, 417
BssNAI GTATAC 1 cut(s) 360
BssSI CACGAG 1 cut(s) 524
BssT1I CCWWGG 1 cut(s) 541
Bst1107I GTATAC 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 524
Bst2UI CCWGG 2 cut(s) 133, 172
Bst4CI ACNGT 4 cut(s) 109, 325, 379, 576
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 1 cut(s) 177
BstDEI CTNAG 4 cut(s) 202, 434, 464, 473
BstENI CCTNNNNNAGG 1 cut(s) 169
BstF5I GGATG 4 cut(s) 123, 376, 484, 594
BstFNI CGCG 1 cut(s) 455
BstKTI GATC 3 cut(s) 152, 217, 420
BstMBI GATC 3 cut(s) 149, 214, 417
BstMCI CGRYCG 1 cut(s) 196
BstMWI GCNNNNNNNGC 3 cut(s) 176, 500, 559
BstNI CCWGG 2 cut(s) 133, 172
BstNSI RCATGY 1 cut(s) 430
BstSFI CTRYAG 1 cut(s) 572
BstUI CGCG 1 cut(s) 455
BstV1I GCAGC 1 cut(s) 546
BstZ17I GTATAC 1 cut(s) 360
BsuI GTATCC 2 cut(s) 136, 438
BsuRI GGCC 5 cut(s) 207, 311, 329, 469, 491
BtsCI GGATG 4 cut(s) 123, 376, 484, 594
BtsIMutI CAGTG 1 cut(s) 330
Cac8I GCNNGC 1 cut(s) 177
CaiI CAGNNNCTG 1 cut(s) 580
Cfr10I RCCGGY 1 cut(s) 195
Cfr13I GGNCC 3 cut(s) 237, 310, 375
Cfr9I CCCGGG 2 cut(s) 392, 505
CseI GACGC 1 cut(s) 461
Csp6I GTAC 3 cut(s) 105, 157, 199
CspAI ACCGGT 1 cut(s) 195
CviAII CATG 1 cut(s) 427
CviQI GTAC 3 cut(s) 105, 157, 199
DdeI CTNAG 4 cut(s) 202, 434, 464, 473
DpnI GATC 3 cut(s) 151, 216, 419
DpnII GATC 3 cut(s) 149, 214, 417
EaeI YGGCCR 2 cut(s) 327, 489
Eco130I CCWWGG 1 cut(s) 541
Eco147I AGGCCT 1 cut(s) 469
Eco32I GATATC 1 cut(s) 190
Eco47I GGWCC 2 cut(s) 237, 375
Eco57I CTGAAG 1 cut(s) 201
Eco88I CYCGRG 3 cut(s) 335, 392, 505
EcoNI CCTNNNNNAGG 1 cut(s) 169
EcoO109I RGGNCCY 2 cut(s) 237, 310
EcoRII CCWGG 2 cut(s) 131, 170
EcoRV GATATC 1 cut(s) 190
EcoT14I CCWWGG 1 cut(s) 541
ErhI CCWWGG 1 cut(s) 541
FaeI CATG 1 cut(s) 430
FaiI YATR 7 cut(s) 20, 83, 303, 360, 382, 404, 428
FaqI GGGAC 1 cut(s) 388
FatI CATG 1 cut(s) 426
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 2 cut(s) 492, 560
FokI GGATG 4 cut(s) 130, 383, 491, 601
Fsp4HI GCNGC 2 cut(s) 492, 560
GluI GCNGC 2 cut(s) 492, 560
HaeIII GGCC 5 cut(s) 207, 311, 329, 469, 491
HapII CCGG 8 cut(s) 102, 196, 314, 393, 449, 506, 565, 605
HgaI GACGC 1 cut(s) 461
Hin1II CATG 1 cut(s) 430
HincII GTYRAC 1 cut(s) 615
HindII GTYRAC 1 cut(s) 615
HinfI GANTC 4 cut(s) 122, 272, 343, 529
HpaII CCGG 8 cut(s) 102, 196, 314, 393, 449, 506, 565, 605
HphI GGTGA 2 cut(s) 296, 594
Hpy166II GTNNAC 2 cut(s) 360, 615
Hpy188I TCNGA 4 cut(s) 127, 259, 277, 348
Hpy188III TCNNGA 2 cut(s) 77, 335
Hpy8I GTNNAC 2 cut(s) 360, 615
Hpy99I CGWCG 2 cut(s) 157, 389
HpyAV CCTTC 1 cut(s) 406
HpyCH4III ACNGT 4 cut(s) 109, 325, 379, 576
HpyCH4V TGCA 1 cut(s) 523
HpyF10VI GCNNNNNNNGC 3 cut(s) 176, 500, 559
HpyF3I CTNAG 4 cut(s) 202, 434, 464, 473
Hsp92II CATG 1 cut(s) 430
KpnI GGTACC 1 cut(s) 108
Kzo9I GATC 3 cut(s) 149, 214, 417
LmnI GCTCC 1 cut(s) 460
Lsp1109I GCAGC 1 cut(s) 546
LweI GCATC 1 cut(s) 579
MaeIII GTNAC 3 cut(s) 284, 319, 600
MalI GATC 3 cut(s) 151, 216, 419
MboI GATC 3 cut(s) 149, 214, 417
MlsI TGGCCA 1 cut(s) 329
MluCI AATT 2 cut(s) 34, 218
MluNI TGGCCA 1 cut(s) 329
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 1 cut(s) 255
Mox20I TGGCCA 1 cut(s) 329
MroXI GAANNNNTTC 1 cut(s) 533
MscI TGGCCA 1 cut(s) 329
MslI CAYNNNNRTG 1 cut(s) 425
Msp20I TGGCCA 1 cut(s) 329
MspA1I CMGCKG 1 cut(s) 559
MspI CCGG 8 cut(s) 102, 196, 314, 393, 449, 506, 565, 605
Mva1269I GAATGC 1 cut(s) 628
MvaI CCWGG 2 cut(s) 133, 172
MvnI CGCG 1 cut(s) 455
MwoI GCNNNNNNNGC 3 cut(s) 176, 500, 559
NciI CCSGG 8 cut(s) 102, 314, 393, 394, 506, 507, 565, 606
NdeII GATC 3 cut(s) 149, 214, 417
NlaIII CATG 1 cut(s) 430
NlaIV GGNNCC 7 cut(s) 75, 99, 106, 238, 312, 376, 569
NmeAIII GCCGAG 2 cut(s) 233, 378
NmuCI GTSAC 3 cut(s) 284, 319, 600
NspI RCATGY 1 cut(s) 430
PceI AGGCCT 1 cut(s) 469
PcsI WCGNNNNNNNCGW 2 cut(s) 152, 239
PctI GAATGC 1 cut(s) 628
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 3 cut(s) 122, 343, 529
PinAI ACCGGT 1 cut(s) 195
PkrI GCNGC 2 cut(s) 493, 561
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
PpuMI RGGWCCY 1 cut(s) 237
Psp5II RGGWCCY 1 cut(s) 237
Psp6I CCWGG 2 cut(s) 131, 170
PspGI CCWGG 2 cut(s) 131, 170
PspN4I GGNNCC 7 cut(s) 75, 99, 106, 238, 312, 376, 569
PspPI GGNCC 3 cut(s) 237, 310, 375
PspPPI RGGWCCY 1 cut(s) 237
PstNI CAGNNNCTG 1 cut(s) 580
RsaI GTAC 3 cut(s) 106, 158, 200
RsaNI GTAC 3 cut(s) 105, 157, 199
RseI CAYNNNNRTG 1 cut(s) 425
SatI GCNGC 2 cut(s) 492, 560
Sau3AI GATC 3 cut(s) 149, 214, 417
Sau96I GGNCC 3 cut(s) 237, 310, 375
SchI GAGTC 1 cut(s) 281
SetI ASST 6 cut(s) 99, 181, 359, 440, 465, 600
SfaNI GCATC 1 cut(s) 579
SfcI CTRYAG 1 cut(s) 572
SinI GGWCC 2 cut(s) 237, 375
SmaI CCCGGG 2 cut(s) 394, 507
SmiMI CAYNNNNRTG 1 cut(s) 425
Sse9I AATT 2 cut(s) 34, 218
SseBI AGGCCT 1 cut(s) 469
SsiI CCGC 6 cut(s) 305, 368, 455, 492, 557, 586
StuI AGGCCT 1 cut(s) 469
StyI CCWWGG 1 cut(s) 541
TaaI ACNGT 4 cut(s) 109, 325, 379, 576
TaqI TCGA 3 cut(s) 192, 242, 423
TasI AATT 2 cut(s) 34, 218
TauI GCSGC 1 cut(s) 494
TfiI GAWTC 3 cut(s) 122, 343, 529
TscAI CASTG 1 cut(s) 330
TseFI GTSAC 3 cut(s) 284, 319, 600
TseI GCWGC 1 cut(s) 559
Tsp45I GTSAC 3 cut(s) 284, 319, 600
TspDTI ATGAA 2 cut(s) 17, 425
TspMI CCCGGG 2 cut(s) 392, 505
TspRI CASTG 1 cut(s) 330
VpaK11BI GGWCC 2 cut(s) 237, 375
XagI CCTNNNNNAGG 1 cut(s) 169
XapI RAATTY 1 cut(s) 34
XceI RCATGY 1 cut(s) 430
XmaI CCCGGG 2 cut(s) 392, 505
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.