Rmu_sc0002868.1_g000055

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002868.1
OG0000087
Physical Location & Seq
Forward (+)
160765 .. 164862
4098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002868.1_g000055.1.cds

Sequence Viewer

Length: 1929 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgaccggtacttaggcagggtagatcaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtgtggagtccgacgagggtgagagcgagggtggatcagcggaggccccggtagtcacagtgtccattcccgagggcattccgaagccgaggtacacacttgcggatgggaaaggatggggagatggccgcgaatcttgccccggggtgggtggcgctgcacgagaatcagctccaccaagggtaatcgctaccactgccccggtgcctacagtatctgctgcggatagggctgtcaattccgacacgacccgccaacacgactcgaaatccgcacgaaataaagcggtgaaatcgccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccagggagaagacgccctgcacatcgacgtcgacctagggtcaaaaggtacgagttggtccattgaagaaacccttctggagatcaccgatgagggatacggtgaacctgatcccgacgctcccgtgacccacgtcgcgcagccctccatggccgatgttattacgatagatgacaccggaatgggaaaagtaccggccccagtgcctatttcctctcgttccactgggggcgatgaggcattactccccggtgagaagaagagatcccacaggcactggcatcggactgataaggaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcagaagaaagatcacccgggatcagagtcgttgccttctcttggcctgttatctcctgccattctggtaatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcatgcggtccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaggataacactccccaagagattcgccgtctcgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaagggcaagctggagaagaagcgggactcattgagggctgagatggccgccgctaagcagcggatcgcggagcttgagggtgagggtgaaggtgaggttgctgaggcgcgggaagaggtaaagaacgtccgggactccgagaaaaaggctgtagagtctgccgtctcatggaaggagaaggcagactacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatctctatgctggctactgcccaagataaggctgtcattatgcagttcaaggagtgggtggcggccgggtatttagatgaagccaaattcaggcggggtctcctggagaaaaagaagaaggatcgggaggcggcggccaagtttggtgcggtgggtctcagagtaccggagacgatcgaaaggggtttccccggtggcctccgttgccttggttctgatagcccacaacacttccgggagtttagcagcccaaagacccttggctccgtcaagtttctttttcagtattttcttgattatcttattgacagcttcgacctgaccgttggtctgggggtgagccggggaagcatagaggatcttagtgccaaggttctgtgtgtaagccctcaactcgtcattgtcaaattgggtaccgttgtccgtgactatggtatccgggactccgaacctgcagtagatgttcttccatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

642

Amino Acids

70.13

Weight (kDa)

5.24

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1168
AatII GACGTC 1 cut(s) 549
Acc36I ACCTGC 2 cut(s) 1168, 1915
Acc65I GGTACC 1 cut(s) 1868
AccB1I GGYRCC 2 cut(s) 352, 1868
AccB7I CCANNNNNTGG 1 cut(s) 502
AccI GTMKAC 1 cut(s) 549
AccII CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
AcoI YGGCCR 6 cut(s) 274, 669, 829, 1245, 1518, 1590
AcsI RAATTY 1 cut(s) 1541
AcuI CTGAAG 3 cut(s) 84, 1034, 1169
AcyI GRCGYC 3 cut(s) 531, 546, 1125
AgeI ACCGGT 1 cut(s) 78
AgsI TTSAA 3 cut(s) 584, 1108, 1504
AhdI GACNNNNNGTC 2 cut(s) 556, 1782
AjiI CACGTC 1 cut(s) 652
AjnI CCWGG 5 cut(s) 14, 53, 519, 1389, 1557
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 7 cut(s) 62, 320, 955, 1210, 1273, 1453, 1767
AluI AGCT 7 cut(s) 62, 320, 955, 1210, 1273, 1453, 1767
Alw21I GWGCWC 1 cut(s) 1455
Alw26I GTCTC 5 cut(s) 1079, 1369, 1559, 1616, 1619
AlwNI CAGNNNCTG 2 cut(s) 365, 795
Ama87I CYCGRG 4 cut(s) 218, 290, 877, 1080
ApeKI GCWGC 6 cut(s) 305, 368, 658, 952, 1258, 1701
ApoI RAATTY 1 cut(s) 1541
AsiGI ACCGGT 1 cut(s) 78
Asp700I GAANNNNTTC 1 cut(s) 591
Asp718I GGTACC 1 cut(s) 1868
AspA2I CCTAGG 1 cut(s) 553
AspLEI GCGC 3 cut(s) 305, 658, 1309
AspS9I GGNCC 7 cut(s) 120, 193, 517, 576, 715, 996, 1041
AvaI CYCGRG 4 cut(s) 218, 290, 877, 1080
AvaII GGWCC 3 cut(s) 120, 576, 996
AvrII CCTAGG 1 cut(s) 553
BaeGI GKGCMC 1 cut(s) 1102
BaeI ACNNNNGTAYC 4 cut(s) 1860, 1873, 1893, 1906
BanI GGYRCC 2 cut(s) 352, 1868
BanII GRGCYC 1 cut(s) 1455
BarI GAAGNNNNNNTAC 5 cut(s) 224, 256, 1370, 1402, 1905
BauI CACGAG 2 cut(s) 309, 1418
BbsI GAAGAC 2 cut(s) 39, 534
Bbv12I GWGCWC 1 cut(s) 1455
BbvCI CCTCAGC 1 cut(s) 1302
BbvI GCAGC 6 cut(s) 292, 355, 670, 964, 1270, 1713
BccI CCATC 8 cut(s) 248, 258, 266, 478, 496, 508, 953, 1237
BceAI ACGGC 3 cut(s) 1056, 1346, 1409
BcgI CGANNNNNNTGC 2 cut(s) 782, 816
BciT130I CCWGG 5 cut(s) 16, 55, 521, 1391, 1559
BciVI GTATCC 3 cut(s) 19, 608, 1901
BcoDI GTCTC 5 cut(s) 1079, 1369, 1559, 1616, 1619
BfaI CTAG 1 cut(s) 554
BfmI CTRYAG 3 cut(s) 357, 1350, 1908
BfoI RGCGCY 1 cut(s) 306
BfuAI ACCTGC 2 cut(s) 1168, 1915
BfuI GTATCC 3 cut(s) 19, 608, 1901
BlnI CCTAGG 1 cut(s) 553
BlpI GCTNAGC 1 cut(s) 1254
Bme18I GGWCC 3 cut(s) 120, 576, 996
BmeRI GACNNNNNGTC 2 cut(s) 556, 1782
BmeT110I CYCGRG 4 cut(s) 218, 290, 877, 1080
BmgBI CACGTC 1 cut(s) 652
BmgT120I GGNCC 7 cut(s) 120, 193, 517, 576, 715, 996, 1041
BmiI GGNNCC 6 cut(s) 121, 195, 354, 717, 1720, 1870
BmrI ACTGGG 3 cut(s) 138, 713, 753
BmsI GCATC 3 cut(s) 481, 808, 1083
BmuI ACTGGG 3 cut(s) 138, 713, 753
BoxI GACNNNNGTC 1 cut(s) 650
BpiI GAAGAC 2 cut(s) 39, 534
BplI GAGNNNNNCTC 2 cut(s) 1442, 1474
BpmI CTGGAG 4 cut(s) 617, 1232, 1412, 1580
Bpu10I CCTNAGC 1 cut(s) 1302
Bpu1102I GCTNAGC 1 cut(s) 1254
BpuEI CTTGAG 1 cut(s) 1295
BsaBI GATNNNNATC 1 cut(s) 1143
BsaHI GRCGYC 3 cut(s) 531, 546, 1125
BsaI GGTCTC 2 cut(s) 1559, 1616
BsaWI WCCGGW 3 cut(s) 78, 695, 1621
BsaXI ACNNNNNCTCC 4 cut(s) 806, 836, 1424, 1454
Bse118I RCCGGY 2 cut(s) 78, 712
Bse1I ACTGG 7 cut(s) 43, 133, 719, 748, 800, 832, 853
Bse8I GATNNNNATC 1 cut(s) 1143
BseBI CCWGG 5 cut(s) 16, 55, 521, 1391, 1559
BseGI GGATG 5 cut(s) 259, 269, 489, 493, 841
BseJI GATNNNNATC 1 cut(s) 1143
BseMII CTCAG 3 cut(s) 1230, 1293, 1627
BseNI ACTGG 7 cut(s) 43, 133, 719, 748, 800, 832, 853
BseRI GAGGAG 3 cut(s) 488, 1169, 1445
BseSI GKGCMC 1 cut(s) 1102
BseX3I CGGCCG 1 cut(s) 1518
BseXI GCAGC 6 cut(s) 292, 355, 670, 964, 1270, 1713
BsgI GTGCAG 2 cut(s) 291, 521
Bsh1236I CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
Bsh1285I CGRYCG 4 cut(s) 79, 1033, 1521, 1632
BshNI GGYRCC 2 cut(s) 352, 1868
BshTI ACCGGT 1 cut(s) 78
BsiEI CGRYCG 4 cut(s) 79, 1033, 1521, 1632
BsiHKAI GWGCWC 1 cut(s) 1455
BsiHKCI CYCGRG 4 cut(s) 218, 290, 877, 1080
BslFI GGGAC 3 cut(s) 1238, 1346, 1910
BsmAI GTCTC 5 cut(s) 1079, 1369, 1559, 1616, 1619
BsmBI CGTCTC 3 cut(s) 1079, 1369, 1619
BsmFI GGGAC 3 cut(s) 1238, 1346, 1910
BsmI GAATGC 1 cut(s) 225
Bso31I GGTCTC 2 cut(s) 1559, 1616
BsoBI CYCGRG 4 cut(s) 218, 290, 877, 1080
Bsp1286I GDGCHC 2 cut(s) 1102, 1455
Bsp1720I GCTNAGC 1 cut(s) 1254
Bsp19I CCATGG 1 cut(s) 666
BspCNI CTCAG 3 cut(s) 1231, 1294, 1626
BspFNI CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
BspLI GGNNCC 6 cut(s) 121, 195, 354, 717, 1720, 1870
BspMAI CTGCAG 1 cut(s) 1912
BspMI ACCTGC 2 cut(s) 1168, 1915
BspQI GCTCTTC 1 cut(s) 1443
BspT107I GGYRCC 2 cut(s) 352, 1868
BspTNI GGTCTC 2 cut(s) 1559, 1616
BsrFI RCCGGY 2 cut(s) 78, 712
BsrI ACTGG 7 cut(s) 43, 133, 719, 748, 800, 832, 853
BssAI RCCGGY 2 cut(s) 78, 712
BssNI GRCGYC 3 cut(s) 531, 546, 1125
BssSI CACGAG 2 cut(s) 309, 1418
BssT1I CCWWGG 8 cut(s) 326, 553, 666, 841, 1044, 1663, 1714, 1824
Bst2BI CACGAG 2 cut(s) 309, 1418
Bst2UI CCWGG 5 cut(s) 16, 55, 521, 1391, 1559
Bst4CI ACNGT 5 cut(s) 208, 361, 620, 1780, 1873
Bst6I CTCTTC 6 cut(s) 443, 773, 851, 1109, 1308, 1443
BstACI GRCGYC 3 cut(s) 531, 546, 1125
BstC8I GCNNGC 5 cut(s) 60, 1098, 1129, 1208, 1467
BstDEI CTNAG 6 cut(s) 85, 1239, 1254, 1302, 1613, 1817
BstDSI CCRYGG 3 cut(s) 666, 1407, 1425
BstF5I GGATG 5 cut(s) 259, 269, 489, 493, 841
BstFNI CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
BstH2I RGCGCY 1 cut(s) 306
BstHHI GCGC 3 cut(s) 305, 658, 1309
BstMAI GTCTC 5 cut(s) 1079, 1369, 1559, 1616, 1619
BstMCI CGRYCG 4 cut(s) 79, 1033, 1521, 1632
BstNI CCWGG 5 cut(s) 16, 55, 521, 1391, 1559
BstNSI RCATGY 1 cut(s) 511
BstPAI GACNNNNGTC 1 cut(s) 650
BstSFI CTRYAG 3 cut(s) 357, 1350, 1908
BstSLI GKGCMC 1 cut(s) 1102
BstUI CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
BstV1I GCAGC 6 cut(s) 292, 355, 670, 964, 1270, 1713
BstV2I GAAGAC 2 cut(s) 39, 534
BstX2I RGATCY 3 cut(s) 782, 1009, 1813
BstXI CCANNNNNNTGG 1 cut(s) 848
BstYI RGATCY 3 cut(s) 782, 1009, 1813
BstZI CGGCCG 1 cut(s) 1518
BsuI GTATCC 3 cut(s) 19, 608, 1901
BtgI CCRYGG 3 cut(s) 666, 1407, 1425
BtgZI GCGATG 1 cut(s) 765
BtrI CACGTC 1 cut(s) 652
BtsCI GGATG 5 cut(s) 259, 269, 489, 493, 841
BtsI GCAGTG 1 cut(s) 342
BtsIMutI CAGTG 6 cut(s) 213, 342, 726, 741, 793, 825
BveI ACCTGC 2 cut(s) 1168, 1915
Cac8I GCNNGC 5 cut(s) 60, 1098, 1129, 1208, 1467
CaiI CAGNNNCTG 2 cut(s) 365, 795
CfoI GCGC 3 cut(s) 305, 658, 1309
Cfr10I RCCGGY 2 cut(s) 78, 712
Cfr13I GGNCC 7 cut(s) 120, 193, 517, 576, 715, 996, 1041
Cfr42I CCGCGG 1 cut(s) 1410
Cfr9I CCCGGG 3 cut(s) 290, 877, 1080
CseI GACGC 3 cut(s) 539, 644, 1133
CspAI ACCGGT 1 cut(s) 78
CviAII CATG 6 cut(s) 508, 667, 991, 1000, 1193, 1368
DdeI CTNAG 6 cut(s) 85, 1239, 1254, 1302, 1613, 1817
DriI GACNNNNNGTC 2 cut(s) 556, 1782
EaeI YGGCCR 6 cut(s) 274, 669, 829, 1245, 1518, 1590
EagI CGGCCG 1 cut(s) 1518
Eam1104I CTCTTC 6 cut(s) 443, 773, 851, 1109, 1308, 1443
Eam1105I GACNNNNNGTC 2 cut(s) 556, 1782
EarI CTCTTC 6 cut(s) 443, 773, 851, 1109, 1308, 1443
Ecl136II GAGCTC 1 cut(s) 1453
EclXI CGGCCG 1 cut(s) 1518
Eco130I CCWWGG 8 cut(s) 326, 553, 666, 841, 1044, 1663, 1714, 1824
Eco24I GRGCYC 1 cut(s) 1455
Eco31I GGTCTC 2 cut(s) 1559, 1616
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 3 cut(s) 120, 576, 996
Eco52I CGGCCG 1 cut(s) 1518
Eco53kI GAGCTC 1 cut(s) 1453
Eco57I CTGAAG 3 cut(s) 84, 1034, 1169
Eco88I CYCGRG 4 cut(s) 218, 290, 877, 1080
EcoICRI GAGCTC 1 cut(s) 1453
EcoO109I RGGNCCY 2 cut(s) 120, 193
EcoRII CCWGG 5 cut(s) 14, 53, 519, 1389, 1557
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 8 cut(s) 326, 553, 666, 841, 1044, 1663, 1714, 1824
EcoT38I GRGCYC 1 cut(s) 1455
ErhI CCWWGG 8 cut(s) 326, 553, 666, 841, 1044, 1663, 1714, 1824
Esp3I CGTCTC 3 cut(s) 1079, 1369, 1619
FaeI CATG 6 cut(s) 511, 670, 994, 1003, 1196, 1371
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 3 cut(s) 1238, 1346, 1910
FatI CATG 6 cut(s) 507, 666, 990, 999, 1192, 1367
FauI CCCGC 6 cut(s) 407, 1089, 1215, 1302, 1414, 1542
FblI GTMKAC 1 cut(s) 549
FokI GGATG 5 cut(s) 266, 276, 496, 500, 848
FriOI GRGCYC 1 cut(s) 1455
FspBI CTAG 1 cut(s) 554
GlaI GCGC 3 cut(s) 304, 657, 1308
GsuI CTGGAG 4 cut(s) 617, 1232, 1412, 1580
HaeII RGCGCY 1 cut(s) 306
HgaI GACGC 3 cut(s) 539, 644, 1133
HhaI GCGC 3 cut(s) 305, 658, 1309
Hin1I GRCGYC 3 cut(s) 531, 546, 1125
Hin1II CATG 6 cut(s) 511, 670, 994, 1003, 1196, 1371
Hin6I GCGC 3 cut(s) 303, 656, 1307
HinP1I GCGC 3 cut(s) 303, 656, 1307
HincII GTYRAC 1 cut(s) 550
HindII GTYRAC 1 cut(s) 550
Hpy166II GTNNAC 5 cut(s) 243, 550, 623, 825, 1114
Hpy188III TCNNGA 5 cut(s) 218, 596, 632, 1580, 1748
Hpy8I GTNNAC 5 cut(s) 243, 550, 623, 825, 1114
Hpy99I CGWCG 6 cut(s) 40, 164, 548, 551, 638, 656
HpyCH4III ACNGT 5 cut(s) 208, 361, 620, 1780, 1873
HpyCH4IV ACGT 4 cut(s) 546, 651, 821, 1326
HpyCH4V TGCA 4 cut(s) 308, 538, 1498, 1910
HpyF3I CTNAG 6 cut(s) 85, 1239, 1254, 1302, 1613, 1817
HpySE526I ACGT 4 cut(s) 546, 651, 821, 1326
Hsp92I GRCGYC 3 cut(s) 531, 546, 1125
Hsp92II CATG 6 cut(s) 511, 670, 994, 1003, 1196, 1371
HspAI GCGC 3 cut(s) 303, 656, 1307
KpnI GGTACC 1 cut(s) 1872
KspI CCGCGG 1 cut(s) 1410
LguI GCTCTTC 1 cut(s) 1443
LmnI GCTCC 4 cut(s) 325, 643, 1270, 1724
Lsp1109I GCAGC 6 cut(s) 292, 355, 670, 964, 1270, 1713
LweI GCATC 3 cut(s) 481, 808, 1083
MaeI CTAG 1 cut(s) 554
MaeII ACGT 4 cut(s) 546, 651, 821, 1326
MaeIII GTNAC 4 cut(s) 202, 643, 817, 1880
MflI RGATCY 3 cut(s) 782, 1009, 1813
MhlI GDGCHC 2 cut(s) 1102, 1455
MluCI AATT 4 cut(s) 101, 385, 1541, 1862
MlyI GAGTC 7 cut(s) 164, 404, 896, 1220, 1328, 1364, 1892
MmeI TCCRAC 2 cut(s) 183, 414
MroXI GAANNNNTTC 1 cut(s) 591
MslI CAYNNNNRTG 3 cut(s) 512, 698, 1460
MspA1I CMGCKG 4 cut(s) 188, 955, 1261, 1409
Mva1269I GAATGC 1 cut(s) 225
MvaI CCWGG 5 cut(s) 16, 55, 521, 1391, 1559
MvnI CGCG 5 cut(s) 279, 656, 1268, 1309, 1409
NcoI CCATGG 1 cut(s) 666
NlaIII CATG 6 cut(s) 511, 670, 994, 1003, 1196, 1371
NlaIV GGNNCC 6 cut(s) 121, 195, 354, 717, 1720, 1870
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 202, 643, 817, 1880
NspI RCATGY 1 cut(s) 511
PaqCI CACCTGC 1 cut(s) 1168
PciSI GCTCTTC 1 cut(s) 1443
PcsI WCGNNNNNNNCGW 4 cut(s) 35, 122, 975, 1776
PctI GAATGC 1 cut(s) 225
PdmI GAANNNNTTC 1 cut(s) 591
PfeI GAWTC 5 cut(s) 5, 281, 314, 1066, 1085
PflMI CCANNNNNTGG 1 cut(s) 502
PfoI TCCNGGA 4 cut(s) 1329, 1557, 1689, 1893
PinAI ACCGGT 1 cut(s) 78
Ple19I CGATCG 1 cut(s) 1632
PleI GAGTC 7 cut(s) 163, 404, 895, 1220, 1328, 1363, 1892
PpsI GAGTC 7 cut(s) 163, 404, 895, 1220, 1328, 1363, 1892
PpuMI RGGWCCY 1 cut(s) 120
PshAI GACNNNNGTC 1 cut(s) 650
Psp124BI GAGCTC 1 cut(s) 1455
Psp5II RGGWCCY 1 cut(s) 120
Psp6I CCWGG 5 cut(s) 14, 53, 519, 1389, 1557
PspGI CCWGG 5 cut(s) 14, 53, 519, 1389, 1557
PspN4I GGNNCC 6 cut(s) 121, 195, 354, 717, 1720, 1870
PspPI GGNCC 7 cut(s) 120, 193, 517, 576, 715, 996, 1041
PspPPI RGGWCCY 1 cut(s) 120
PstI CTGCAG 1 cut(s) 1912
PstNI CAGNNNCTG 2 cut(s) 365, 795
PsuI RGATCY 3 cut(s) 782, 1009, 1813
PvuI CGATCG 1 cut(s) 1632
PvuII CAGCTG 1 cut(s) 955
RseI CAYNNNNRTG 3 cut(s) 512, 698, 1460
SacI GAGCTC 1 cut(s) 1455
SacII CCGCGG 1 cut(s) 1410
SalI GTCGAC 1 cut(s) 548
SapI GCTCTTC 1 cut(s) 1443
Sau96I GGNCC 7 cut(s) 120, 193, 517, 576, 715, 996, 1041
SchI GAGTC 7 cut(s) 164, 404, 896, 1220, 1328, 1364, 1892
SduI GDGCHC 2 cut(s) 1102, 1455
SfaNI GCATC 3 cut(s) 481, 808, 1083
SfcI CTRYAG 3 cut(s) 357, 1350, 1908
Sfr303I CCGCGG 1 cut(s) 1410
SgrBI CCGCGG 1 cut(s) 1410
SinI GGWCC 3 cut(s) 120, 576, 996
SmaI CCCGGG 3 cut(s) 292, 879, 1082
SmiMI CAYNNNNRTG 3 cut(s) 512, 698, 1460
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
Sse9I AATT 4 cut(s) 101, 385, 1541, 1862
SspMI CTAG 1 cut(s) 554
SstI GAGCTC 1 cut(s) 1455
StyI CCWWGG 8 cut(s) 326, 553, 666, 841, 1044, 1663, 1714, 1824
TaaI ACNGT 5 cut(s) 208, 361, 620, 1780, 1873
TaiI ACGT 4 cut(s) 549, 654, 824, 1329
TaqI TCGA 8 cut(s) 75, 125, 413, 543, 549, 1029, 1632, 1770
TasI AATT 4 cut(s) 101, 385, 1541, 1862
TatI WGTACW 1 cut(s) 1434
TauI GCSGC 6 cut(s) 279, 1250, 1253, 1520, 1589, 1592
TfiI GAWTC 5 cut(s) 5, 281, 314, 1066, 1085
TscAI CASTG 6 cut(s) 213, 349, 726, 748, 800, 832
TseFI GTSAC 4 cut(s) 202, 643, 817, 1880
TseI GCWGC 6 cut(s) 305, 368, 658, 952, 1258, 1701
Tsp45I GTSAC 4 cut(s) 202, 643, 817, 1880
TspDTI ATGAA 4 cut(s) 979, 996, 1181, 1548
TspGWI ACGGA 3 cut(s) 1646, 1711, 1868
TspMI CCCGGG 3 cut(s) 290, 877, 1080
TspRI CASTG 6 cut(s) 213, 349, 726, 748, 800, 832
Van91I CCANNNNNTGG 1 cut(s) 502
VpaK11BI GGWCC 3 cut(s) 120, 576, 996
XapI RAATTY 1 cut(s) 1541
XceI RCATGY 1 cut(s) 511
XmaI CCCGGG 3 cut(s) 290, 877, 1080
XmaJI CCTAGG 1 cut(s) 553
XmiI GTMKAC 1 cut(s) 549
XmnI GAANNNNTTC 1 cut(s) 591
XspI CTAG 1 cut(s) 554
ZraI GACGTC 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.