Rmu_sc0003760.1_g000029

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003760.1
OG0000087
Physical Location & Seq
Reverse (-)
94826 .. 95887
1062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003760.1_g000029.1.cds

Sequence Viewer

Length: 993 bp
atggttactgttgtcgatactggacgagataaggtgccggtgtcttgctctttttcctcccagtctacagggtcaactggaagcgaggacgtcttgcttcctggtgagaagagaaggttccacaggcaccgccatcggagtggggataatgaggaggtcacttacaccggcagggatgttaaaggggcggagctgacaaggcagaagaagattcatccgggatcagaaccatcgccatcgcttgcgcttctgtccctaggcataccagtagtcgccaagaagcctatcaagcagctgttgagcgagtatggggttgctgatgagaaatttgtgtgttcgatgctggccaacctaaaagacatcgacctcgaccgggtacgagcgaaggacaactctccccaggcaaatggtcgtatcgcccgagaatcaatgatgcgggcactattcaacgtgtacgagattgatgctagtgaggaagatactcgcttgaagaaaggaagtagcaacctctccgggcaagtgaagtatcttcatgaggagaaagcaaaactagagaaagagtgggactccttgaagaagaaggtagagtccctaactcccaaggtagccgagctggaggcggctaagaagaagatcgcagatcttgagggtgaacttgtcggggcaagggatgagctagggagtgcccgggactccgagaaggaagctgcagaatctgccaagtcatggaaggagagggcagatcatctggaggagcgccttcccgttaagaggcaagaggccattgctgggtacaaagattcccaagaaattatggatatgatactcgccgctcaagacaaggtcgtgattatgaagtacaaagaatgggtggcggctcggtacctggatgaagccaaattcaggcggggacttcttgagaagaagaagaaggtacaggaggctgcagccaaagcgggtgccggtggatcccaaagtaccgctcttgaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

330

Amino Acids

36.65

Weight (kDa)

8.73

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 93
Acc65I GGTACC 1 cut(s) 882
AccB1I GGYRCC 4 cut(s) 34, 126, 882, 959
AccB7I CCANNNNNTGG 1 cut(s) 726
AccBSI CCGCTC 2 cut(s) 833, 983
AccI GTMKAC 1 cut(s) 65
AciI CCGC 9 cut(s) 130, 188, 436, 620, 831, 875, 907, 956, 981
AclWI GGATC 3 cut(s) 229, 963, 976
AcoI YGGCCR 1 cut(s) 345
AcsI RAATTY 2 cut(s) 326, 899
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 7 cut(s) 378, 455, 794, 860, 884, 936, 979
AfiI CCNNNNNNNGG 5 cut(s) 373, 726, 771, 789, 903
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 4 cut(s) 448, 490, 574, 989
AjnI CCWGG 3 cut(s) 100, 399, 885
AluBI AGCT 5 cut(s) 193, 295, 613, 676, 707
AluI AGCT 5 cut(s) 193, 295, 613, 676, 707
AlwI GGATC 3 cut(s) 229, 963, 976
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 2 cut(s) 420, 687
AoxI GGCC 2 cut(s) 345, 780
ApeKI GCWGC 4 cut(s) 292, 707, 944, 947
ApoI RAATTY 2 cut(s) 326, 899
Asp718I GGTACC 1 cut(s) 882
AspA2I CCTAGG 1 cut(s) 256
AspLEI GCGC 2 cut(s) 247, 759
AsuC2I CCSGG 5 cut(s) 219, 374, 514, 688, 689
AsuHPI GGTGA 2 cut(s) 116, 662
AvaI CYCGRG 2 cut(s) 420, 687
AvrII CCTAGG 1 cut(s) 256
BaeGI GKGCMC 2 cut(s) 442, 688
BalI TGGCCA 1 cut(s) 347
BamHI GGATCC 1 cut(s) 968
BanI GGYRCC 4 cut(s) 34, 126, 882, 959
BbvI GCAGC 4 cut(s) 304, 694, 931, 959
BccI CCATC 3 cut(s) 141, 238, 244
BcgI CGANNNNNNTGC 4 cut(s) 116, 150, 446, 480
BciT130I CCWGG 3 cut(s) 102, 401, 887
BcnI CCSGG 5 cut(s) 219, 374, 514, 688, 689
BfaI CTAG 4 cut(s) 257, 468, 551, 677
BfmI CTRYAG 3 cut(s) 66, 708, 945
BfoI RGCGCY 1 cut(s) 760
BglII AGATCT 1 cut(s) 640
BisI GCNGC 7 cut(s) 293, 621, 708, 831, 876, 945, 948
BlnI CCTAGG 1 cut(s) 256
BlsI GCNGC 7 cut(s) 294, 622, 709, 832, 877, 946, 949
Bme1390I CCNGG 8 cut(s) 102, 219, 374, 401, 514, 688, 689, 887
BmeT110I CYCGRG 2 cut(s) 420, 687
BmiI GGNNCC 6 cut(s) 36, 119, 128, 884, 961, 970
BmrFI CCNGG 8 cut(s) 102, 219, 374, 401, 514, 688, 689, 887
BmrI ACTGGG 1 cut(s) 55
BmsI GCATC 3 cut(s) 330, 423, 454
BmuI ACTGGG 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 551, 583
BpmI CTGGAG 2 cut(s) 635, 770
BpuEI CTTGAG 3 cut(s) 665, 819, 938
BpuMI CCSGG 5 cut(s) 219, 374, 514, 688, 689
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 4 cut(s) 256, 399, 600, 687
Bsc4I CCNNNNNNNGG 5 cut(s) 373, 726, 771, 789, 903
Bse118I RCCGGY 3 cut(s) 37, 167, 962
Bse1I ACTGG 4 cut(s) 25, 61, 82, 266
Bse3DI GCAATG 1 cut(s) 783
BseBI CCWGG 3 cut(s) 102, 401, 887
BseDI CCNNGG 4 cut(s) 256, 399, 600, 687
BseGI GGATG 4 cut(s) 181, 214, 676, 895
BseLI CCNNNNNNNGG 5 cut(s) 373, 726, 771, 789, 903
BseMI GCAATG 1 cut(s) 783
BseNI ACTGG 4 cut(s) 25, 61, 82, 266
BseRI GAGGAG 3 cut(s) 167, 551, 767
BseSI GKGCMC 2 cut(s) 442, 688
BseXI GCAGC 4 cut(s) 304, 694, 931, 959
BseYI CCCAGC 1 cut(s) 788
Bsh1285I CGRYCG 1 cut(s) 373
BshFI GGCC 2 cut(s) 347, 782
BshNI GGYRCC 4 cut(s) 34, 126, 882, 959
BsiEI CGRYCG 1 cut(s) 373
BsiHKCI CYCGRG 2 cut(s) 420, 687
BsiSI CCGG 7 cut(s) 38, 168, 218, 373, 513, 688, 963
BslFI GGGAC 5 cut(s) 238, 574, 578, 704, 924
BslI CCNNNNNNNGG 5 cut(s) 373, 726, 771, 789, 903
BsmFI GGGAC 5 cut(s) 238, 574, 578, 704, 924
BsnI GGCC 2 cut(s) 347, 782
BsoBI CYCGRG 2 cut(s) 420, 687
Bsp1286I GDGCHC 2 cut(s) 442, 688
Bsp143I GATC 5 cut(s) 221, 633, 640, 742, 968
BspACI CCGC 9 cut(s) 130, 188, 436, 620, 831, 875, 907, 956, 981
BspANI GGCC 2 cut(s) 347, 782
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 6 cut(s) 36, 119, 128, 884, 961, 970
BspMAI CTGCAG 2 cut(s) 712, 949
BspPI GGATC 3 cut(s) 229, 963, 976
BspT107I GGYRCC 4 cut(s) 34, 126, 882, 959
BsrBI CCGCTC 2 cut(s) 833, 983
BsrDI GCAATG 1 cut(s) 783
BsrFI RCCGGY 3 cut(s) 37, 167, 962
BsrI ACTGG 4 cut(s) 25, 61, 82, 266
BssAI RCCGGY 3 cut(s) 37, 167, 962
BssECI CCNNGG 4 cut(s) 256, 399, 600, 687
BssMI GATC 5 cut(s) 221, 633, 640, 742, 968
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 2 cut(s) 256, 600
Bst2UI CCWGG 3 cut(s) 102, 401, 887
Bst4CI ACNGT 1 cut(s) 10
Bst6I CTCTTC 1 cut(s) 104
BstACI GRCGYC 1 cut(s) 90
BstAPI GCANNNNNTGC 1 cut(s) 716
BstC8I GCNNGC 3 cut(s) 243, 345, 438
BstDEI CTNAG 1 cut(s) 624
BstF5I GGATG 4 cut(s) 181, 214, 676, 895
BstH2I RGCGCY 1 cut(s) 760
BstHHI GCGC 2 cut(s) 247, 759
BstKTI GATC 5 cut(s) 224, 636, 643, 745, 971
BstMBI GATC 5 cut(s) 221, 633, 640, 742, 968
BstMCI CGRYCG 1 cut(s) 373
BstMWI GCNNNNNNNGC 4 cut(s) 199, 289, 716, 953
BstNI CCWGG 3 cut(s) 102, 401, 887
BstSCI CCNGG 8 cut(s) 100, 217, 372, 399, 512, 686, 687, 885
BstSFI CTRYAG 3 cut(s) 66, 708, 945
BstSLI GKGCMC 2 cut(s) 442, 688
BstV1I GCAGC 4 cut(s) 304, 694, 931, 959
BstX2I RGATCY 2 cut(s) 640, 968
BstXI CCANNNNNNTGG 2 cut(s) 140, 407
BstYI RGATCY 2 cut(s) 640, 968
BsuRI GGCC 2 cut(s) 347, 782
BtgZI GCGATG 2 cut(s) 216, 222
BtsCI GGATG 4 cut(s) 181, 214, 676, 895
Cac8I GCNNGC 3 cut(s) 243, 345, 438
CaiI CAGNNNCTG 1 cut(s) 716
CciI TCATGA 1 cut(s) 532
CfoI GCGC 2 cut(s) 247, 759
Cfr10I RCCGGY 3 cut(s) 37, 167, 962
Cfr9I CCCGGG 1 cut(s) 687
Csp6I GTAC 7 cut(s) 377, 454, 793, 859, 883, 935, 978
CviAII CATG 2 cut(s) 533, 726
CviQI GTAC 7 cut(s) 377, 454, 793, 859, 883, 935, 978
DdeI CTNAG 1 cut(s) 624
DpnI GATC 5 cut(s) 223, 635, 642, 744, 970
DpnII GATC 5 cut(s) 221, 633, 640, 742, 968
EaeI YGGCCR 1 cut(s) 345
Eam1104I CTCTTC 1 cut(s) 104
EarI CTCTTC 1 cut(s) 104
EciI GGCGGA 1 cut(s) 203
Eco130I CCWWGG 2 cut(s) 256, 600
Eco88I CYCGRG 2 cut(s) 420, 687
EcoRII CCWGG 3 cut(s) 100, 399, 885
EcoT14I CCWWGG 2 cut(s) 256, 600
ErhI CCWWGG 2 cut(s) 256, 600
FaeI CATG 2 cut(s) 536, 729
FaiI YATR 7 cut(s) 263, 309, 534, 727, 815, 821, 854
FaqI GGGAC 5 cut(s) 238, 574, 578, 704, 924
FatI CATG 2 cut(s) 532, 725
FauI CCCGC 3 cut(s) 429, 900, 949
FblI GTMKAC 1 cut(s) 65
Fnu4HI GCNGC 7 cut(s) 293, 621, 708, 831, 876, 945, 948
FokI GGATG 4 cut(s) 188, 201, 683, 902
Fsp4HI GCNGC 7 cut(s) 293, 621, 708, 831, 876, 945, 948
FspBI CTAG 4 cut(s) 257, 468, 551, 677
GlaI GCGC 2 cut(s) 246, 758
GluI GCNGC 7 cut(s) 293, 621, 708, 831, 876, 945, 948
GsaI CCCAGC 1 cut(s) 792
GsuI CTGGAG 2 cut(s) 635, 770
HaeII RGCGCY 1 cut(s) 760
HaeIII GGCC 2 cut(s) 347, 782
HapII CCGG 7 cut(s) 38, 168, 218, 373, 513, 688, 963
HhaI GCGC 2 cut(s) 247, 759
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 2 cut(s) 536, 729
Hin6I GCGC 2 cut(s) 245, 757
HinP1I GCGC 2 cut(s) 245, 757
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
HinfI GANTC 7 cut(s) 211, 425, 566, 587, 692, 713, 800
HpaII CCGG 7 cut(s) 38, 168, 218, 373, 513, 688, 963
HphI GGTGA 2 cut(s) 116, 662
Hpy166II GTNNAC 4 cut(s) 66, 75, 454, 653
Hpy188I TCNGA 3 cut(s) 138, 226, 697
Hpy188III TCNNGA 7 cut(s) 533, 644, 749, 836, 847, 917, 986
Hpy8I GTNNAC 4 cut(s) 66, 75, 454, 653
HpyAV CCTTC 7 cut(s) 108, 379, 574, 694, 724, 770, 925
HpyCH4III ACNGT 1 cut(s) 10
HpyCH4IV ACGT 2 cut(s) 90, 450
HpyCH4V TGCA 2 cut(s) 710, 947
HpyF10VI GCNNNNNNNGC 4 cut(s) 199, 289, 716, 953
HpyF3I CTNAG 1 cut(s) 624
HpySE526I ACGT 2 cut(s) 90, 450
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 2 cut(s) 536, 729
HspAI GCGC 2 cut(s) 245, 757
KpnI GGTACC 1 cut(s) 886
Kzo9I GATC 5 cut(s) 221, 633, 640, 742, 968
LmnI GCTCC 2 cut(s) 190, 754
Lsp1109I GCAGC 4 cut(s) 304, 694, 931, 959
LweI GCATC 3 cut(s) 330, 423, 454
MaeI CTAG 4 cut(s) 257, 468, 551, 677
MaeII ACGT 2 cut(s) 90, 450
MaeIII GTNAC 2 cut(s) 4, 157
MalI GATC 5 cut(s) 223, 635, 642, 744, 970
MbiI CCGCTC 2 cut(s) 833, 983
MboI GATC 5 cut(s) 221, 633, 640, 742, 968
MflI RGATCY 2 cut(s) 640, 968
MhlI GDGCHC 2 cut(s) 442, 688
MlsI TGGCCA 1 cut(s) 347
MluCI AATT 3 cut(s) 326, 810, 899
MluNI TGGCCA 1 cut(s) 347
MlyI GAGTC 3 cut(s) 560, 596, 686
Mox20I TGGCCA 1 cut(s) 347
MscI TGGCCA 1 cut(s) 347
MseI TTAA 2 cut(s) 180, 768
MslI CAYNNNNRTG 1 cut(s) 138
Msp20I TGGCCA 1 cut(s) 347
MspA1I CMGCKG 1 cut(s) 295
MspI CCGG 7 cut(s) 38, 168, 218, 373, 513, 688, 963
MspR9I CCNGG 8 cut(s) 102, 219, 374, 401, 514, 688, 689, 887
MvaI CCWGG 3 cut(s) 102, 401, 887
MwoI GCNNNNNNNGC 4 cut(s) 199, 289, 716, 953
NciI CCSGG 5 cut(s) 219, 374, 514, 688, 689
NdeII GATC 5 cut(s) 221, 633, 640, 742, 968
NlaIII CATG 2 cut(s) 536, 729
NlaIV GGNNCC 6 cut(s) 36, 119, 128, 884, 961, 970
NmeAIII GCCGAG 1 cut(s) 634
NmuCI GTSAC 1 cut(s) 157
PagI TCATGA 1 cut(s) 532
PcsI WCGNNNNNNNCGW 1 cut(s) 418
PfeI GAWTC 4 cut(s) 211, 425, 713, 800
PflFI GACNNNGTC 1 cut(s) 842
PflMI CCANNNNNTGG 1 cut(s) 726
PfoI TCCNGGA 1 cut(s) 217
PkrI GCNGC 7 cut(s) 294, 622, 709, 832, 877, 946, 949
PleI GAGTC 3 cut(s) 560, 595, 686
PpsI GAGTC 3 cut(s) 560, 595, 686
Psp6I CCWGG 3 cut(s) 100, 399, 885
PspFI CCCAGC 1 cut(s) 788
PspGI CCWGG 3 cut(s) 100, 399, 885
PspN4I GGNNCC 6 cut(s) 36, 119, 128, 884, 961, 970
PstI CTGCAG 2 cut(s) 712, 949
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 2 cut(s) 640, 968
PsyI GACNNNGTC 1 cut(s) 842
PvuII CAGCTG 1 cut(s) 295
RsaI GTAC 7 cut(s) 378, 455, 794, 860, 884, 936, 979
RsaNI GTAC 7 cut(s) 377, 454, 793, 859, 883, 935, 978
RseI CAYNNNNRTG 1 cut(s) 138
SaqAI TTAA 2 cut(s) 180, 768
SatI GCNGC 7 cut(s) 293, 621, 708, 831, 876, 945, 948
Sau3AI GATC 5 cut(s) 221, 633, 640, 742, 968
SchI GAGTC 3 cut(s) 560, 596, 686
ScrFI CCNGG 8 cut(s) 102, 219, 374, 401, 514, 688, 689, 887
SduI GDGCHC 2 cut(s) 442, 688
SfaNI GCATC 3 cut(s) 330, 423, 454
SfcI CTRYAG 3 cut(s) 66, 708, 945
SmaI CCCGGG 1 cut(s) 689
SmiMI CAYNNNNRTG 1 cut(s) 138
SmlI CTYRAG 3 cut(s) 644, 834, 917
SmoI CTYRAG 3 cut(s) 644, 834, 917
Sse9I AATT 3 cut(s) 326, 810, 899
SsiI CCGC 9 cut(s) 130, 188, 436, 620, 831, 875, 907, 956, 981
SspMI CTAG 4 cut(s) 257, 468, 551, 677
StyD4I CCNGG 8 cut(s) 100, 217, 372, 399, 512, 686, 687, 885
StyI CCWWGG 2 cut(s) 256, 600
TaaI ACNGT 1 cut(s) 10
TaiI ACGT 2 cut(s) 93, 453
TaqI TCGA 4 cut(s) 15, 338, 363, 369
TasI AATT 3 cut(s) 326, 810, 899
TatI WGTACW 1 cut(s) 858
TauI GCSGC 3 cut(s) 623, 833, 878
TfiI GAWTC 4 cut(s) 211, 425, 713, 800
Tru1I TTAA 2 cut(s) 180, 768
Tru9I TTAA 2 cut(s) 180, 768
TseFI GTSAC 1 cut(s) 157
TseI GCWGC 4 cut(s) 292, 707, 944, 947
Tsp45I GTSAC 1 cut(s) 157
TspDTI ATGAA 4 cut(s) 203, 521, 869, 906
TspMI CCCGGG 1 cut(s) 687
Tth111I GACNNNGTC 1 cut(s) 842
Van91I CCANNNNNTGG 1 cut(s) 726
XapI RAATTY 2 cut(s) 326, 899
XmaI CCCGGG 1 cut(s) 687
XmaJI CCTAGG 1 cut(s) 256
XmiI GTMKAC 1 cut(s) 65
XspI CTAG 4 cut(s) 257, 468, 551, 677
ZraI GACGTC 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.