Rmu_sc0006375.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006375.1
OG0000087
Physical Location & Seq
Forward (+)
5472 .. 6910
1439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006375.1_g000004.1.cds

Sequence Viewer

Length: 1353 bp
atggaattagaaacaagagctacactcgggggaggagagtcctcgtatcaagcctcagagaggcaagtggaggaagtagtagatgcttatttggcaagtagcggtacccgaggggggcaccggggggaggagaccgcttcttctaccggagtggtatcagagaattcgggaagtgaagggaatgagggaagtaagggaactgttgatagtgaagagcatccggggtccggagaaaaggtgatagttgcgattctcgagggcgtctcggtacgtaggtatgtgctggtggatgaaatgacgtgtgaggaaccaggtagaagtatgaccatgaaggacatcaccaatgttagattaagatggggaatatcggaccaagtggagcttaggcccttgagacccggcgagttggcttgcaatcctcctaaaggatgggtagccctctacgagaaccagttgtaccagggtttatcgttaccgttactgaagccggtacagtatctatttaggatgctaaatctatcaccgggacagttaaccccaaacgcttggcggcagcttttgagcatgttggcgatgtgggatctatacgagcaaggatggcccacaataaatgagttcctggctgtataccgtgtgacatattcaaagaagtatccgggtacggtgacgttcactgcacgggactacgagatgcttgtgatcgatctactgacgtcgcaaagtaagaaatggaaaaacaaagtcttcctcgtcggggggaggtggcagataaagaacaggaagtggcaggttaccaggacctatcaagccatcgggaaccaagtgtatgttttaacagaggttgaaaagaaacggattgcaagggtctacactgtatgggctgacatagaagaaaggagttcttatagatttatccagtaccccatactggataggttaggtttagggagagtacctgttgaggtgctgaaaaggaaatcaaggaagggaaaagaagaagacaagatggacgatctgaagctgatggacaggctgatcaatcaaggagatgaagctctgaggattgatattgacctggagagtaagaatacccagacctcgattgaggacctgctgcttaagataccggacgtgggttatgtggagtcggaccccaacgctcagatagagaagagggatgatctctccgggcacgtggtgactaacatcgacctacagaaagagaagtctaatggtgcggggtcccaggctactctgttgagcctcttggtagcgaaggtgtgttgcttcctggggagaagaggaagaggattcatcgccatcgtcactgcagcagaggcaacgtggaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

450

Amino Acids

50.74

Weight (kDa)

6.44

Isoelectric Point (pI)

33.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 716
Acc36I ACCTGC 2 cut(s) 778, 1119
Acc65I GGTACC 1 cut(s) 104
AccB1I GGYRCC 2 cut(s) 104, 117
AccI GTMKAC 2 cut(s) 627, 867
AccIII TCCGGA 1 cut(s) 227
AciI CCGC 4 cut(s) 102, 135, 550, 1238
AclWI GGATC 1 cut(s) 588
AcsI RAATTY 1 cut(s) 163
AcuI CTGAAG 2 cut(s) 503, 1037
AcvI CACGTG 1 cut(s) 1195
AcyI GRCGYC 2 cut(s) 261, 713
AdeI CACNNNGTG 1 cut(s) 1198
AfaI GTAC 7 cut(s) 106, 270, 458, 492, 661, 920, 954
AfiI CCNNNNNNNGG 8 cut(s) 60, 114, 127, 227, 425, 754, 928, 1133
AflII CTTAAG 1 cut(s) 1118
AflIII ACRYGT 1 cut(s) 299
AgsI TTSAA 2 cut(s) 645, 845
AjiI CACGTC 2 cut(s) 300, 1132
AjnI CCWGG 7 cut(s) 310, 459, 618, 794, 1074, 1245, 1290
AluBI AGCT 5 cut(s) 20, 382, 556, 1021, 1055
AluI AGCT 5 cut(s) 20, 382, 556, 1021, 1055
Alw26I GTCTC 3 cut(s) 125, 268, 388
AlwI GGATC 1 cut(s) 588
Ama87I CYCGRG 3 cut(s) 26, 108, 254
Aor13HI TCCGGA 1 cut(s) 227
AoxI GGCC 2 cut(s) 386, 599
ApeKI GCWGC 3 cut(s) 553, 1114, 1331
ApoI RAATTY 1 cut(s) 163
Asp718I GGTACC 1 cut(s) 104
AspS9I GGNCC 8 cut(s) 225, 370, 387, 600, 798, 1108, 1150, 1242
AsuC2I CCSGG 6 cut(s) 122, 222, 399, 525, 657, 1189
AsuHPI GGTGA 5 cut(s) 250, 331, 513, 676, 1210
AvaI CYCGRG 3 cut(s) 26, 108, 254
AvaII GGWCC 6 cut(s) 225, 370, 798, 1108, 1150, 1242
BaeGI GKGCMC 2 cut(s) 120, 1194
BaeI ACNNNNGTAYC 2 cut(s) 260, 293
BanI GGYRCC 2 cut(s) 104, 117
BbrPI CACGTG 1 cut(s) 1195
BbsI GAAGAC 2 cut(s) 736, 1005
BbvI GCAGC 3 cut(s) 565, 1101, 1343
BccI CCATC 7 cut(s) 351, 423, 591, 818, 1000, 1018, 1328
BciT130I CCWGG 7 cut(s) 312, 461, 620, 796, 1076, 1247, 1292
BciVI GTATCC 1 cut(s) 663
BclI TGATCA 1 cut(s) 1035
BcnI CCSGG 6 cut(s) 122, 222, 399, 525, 657, 1189
BcoDI GTCTC 3 cut(s) 125, 268, 388
BfmI CTRYAG 2 cut(s) 1214, 1329
BfrI CTTAAG 1 cut(s) 1118
BfuAI ACCTGC 2 cut(s) 778, 1119
BfuI GTATCC 1 cut(s) 663
BisI GCNGC 4 cut(s) 551, 554, 1115, 1332
BlsI GCNGC 4 cut(s) 552, 555, 1116, 1333
Bme18I GGWCC 6 cut(s) 225, 370, 798, 1108, 1150, 1242
BmeT110I CYCGRG 3 cut(s) 26, 108, 254
BmgBI CACGTC 2 cut(s) 300, 1132
BmgT120I GGNCC 8 cut(s) 225, 370, 387, 600, 798, 1108, 1150, 1242
BmiI GGNNCC 8 cut(s) 106, 119, 226, 309, 818, 1152, 1243, 1244
BmsI GCATC 4 cut(s) 73, 226, 498, 681
BpiI GAAGAC 2 cut(s) 736, 1005
BplI GAGNNNNNCTC 4 cut(s) 9, 41, 248, 280
BpmI CTGGAG 1 cut(s) 1097
Bpu10I CCTNAGC 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 412
BpuMI CCSGG 6 cut(s) 122, 222, 399, 525, 657, 1189
Bsa29I ATCGAT 1 cut(s) 702
BsaAI YACGTR 2 cut(s) 272, 1195
BsaHI GRCGYC 2 cut(s) 261, 713
BsaI GGTCTC 2 cut(s) 125, 388
BsaJI CCNNGG 6 cut(s) 109, 121, 221, 460, 1245, 1291
BsaWI WCCGGW 3 cut(s) 146, 227, 1126
BsaXI ACNNNNNCTCC 2 cut(s) 222, 252
Bsc4I CCNNNNNNNGG 8 cut(s) 60, 114, 127, 227, 425, 754, 928, 1133
Bse118I RCCGGY 1 cut(s) 487
Bse1I ACTGG 3 cut(s) 451, 916, 933
BseAI TCCGGA 1 cut(s) 227
BseBI CCWGG 7 cut(s) 312, 461, 620, 796, 1076, 1247, 1292
BseCI ATCGAT 1 cut(s) 702
BseDI CCNNGG 6 cut(s) 109, 121, 221, 460, 1245, 1291
BseGI GGATG 6 cut(s) 217, 295, 434, 513, 602, 1183
BseLI CCNNNNNNNGG 8 cut(s) 60, 114, 127, 227, 425, 754, 928, 1133
BseMII CTCAG 3 cut(s) 69, 1049, 1175
BseNI ACTGG 3 cut(s) 451, 916, 933
BseRI GAGGAG 2 cut(s) 48, 143
BseSI GKGCMC 2 cut(s) 120, 1194
BseXI GCAGC 3 cut(s) 565, 1101, 1343
BsgI GTGCAG 1 cut(s) 660
BshFI GGCC 2 cut(s) 388, 601
BshNI GGYRCC 2 cut(s) 104, 117
BshVI ATCGAT 1 cut(s) 702
BsiHKCI CYCGRG 3 cut(s) 26, 108, 254
BslFI GGGAC 3 cut(s) 540, 695, 1228
BslI CCNNNNNNNGG 8 cut(s) 60, 114, 127, 227, 425, 754, 928, 1133
BsmAI GTCTC 3 cut(s) 125, 268, 388
BsmBI CGTCTC 1 cut(s) 268
BsmFI GGGAC 3 cut(s) 540, 695, 1228
BsnI GGCC 2 cut(s) 388, 601
Bso31I GGTCTC 2 cut(s) 125, 388
BsoBI CYCGRG 3 cut(s) 26, 108, 254
Bsp1286I GDGCHC 2 cut(s) 120, 1194
Bsp13I TCCGGA 1 cut(s) 227
Bsp143I GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
BspACI CCGC 4 cut(s) 102, 135, 550, 1238
BspANI GGCC 2 cut(s) 388, 601
BspCNI CTCAG 3 cut(s) 68, 1050, 1174
BspDI ATCGAT 1 cut(s) 702
BspEI TCCGGA 1 cut(s) 227
BspLI GGNNCC 8 cut(s) 106, 119, 226, 309, 818, 1152, 1243, 1244
BspMAI CTGCAG 1 cut(s) 1333
BspMI ACCTGC 2 cut(s) 778, 1119
BspPI GGATC 1 cut(s) 588
BspQI GCTCTTC 1 cut(s) 207
BspT107I GGYRCC 2 cut(s) 104, 117
BspTI CTTAAG 1 cut(s) 1118
BspTNI GGTCTC 2 cut(s) 125, 388
BsrFI RCCGGY 1 cut(s) 487
BsrI ACTGG 3 cut(s) 451, 916, 933
BssAI RCCGGY 1 cut(s) 487
BssECI CCNNGG 6 cut(s) 109, 121, 221, 460, 1245, 1291
BssMI GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
BssNAI GTATAC 1 cut(s) 628
BssNI GRCGYC 2 cut(s) 261, 713
Bst1107I GTATAC 1 cut(s) 628
Bst2UI CCWGG 7 cut(s) 312, 461, 620, 796, 1076, 1247, 1292
Bst4CI ACNGT 7 cut(s) 202, 477, 495, 531, 632, 664, 874
Bst6I CTCTTC 4 cut(s) 207, 1166, 1294, 1300
BstACI GRCGYC 2 cut(s) 261, 713
BstAFI CTTAAG 1 cut(s) 1118
BstBAI YACGTR 2 cut(s) 272, 1195
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 4 cut(s) 55, 383, 1058, 1161
BstEII GGTNACC 1 cut(s) 790
BstENI CCTNNNNNAGG 2 cut(s) 58, 423
BstF5I GGATG 6 cut(s) 217, 295, 434, 513, 602, 1183
BstKTI GATC 6 cut(s) 583, 702, 706, 1015, 1038, 1183
BstMAI GTCTC 3 cut(s) 125, 268, 388
BstMBI GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
BstMWI GCNNNNNNNGC 3 cut(s) 92, 598, 1337
BstNI CCWGG 7 cut(s) 312, 461, 620, 796, 1076, 1247, 1292
BstNSI RCATGY 1 cut(s) 568
BstPI GGTNACC 1 cut(s) 790
BstSFI CTRYAG 2 cut(s) 1214, 1329
BstSLI GKGCMC 2 cut(s) 120, 1194
BstSNI TACGTA 1 cut(s) 272
BstV1I GCAGC 3 cut(s) 565, 1101, 1343
BstV2I GAAGAC 2 cut(s) 736, 1005
BstX2I RGATCY 1 cut(s) 580
BstXI CCANNNNNNTGG 1 cut(s) 546
BstYI RGATCY 1 cut(s) 580
BstZ17I GTATAC 1 cut(s) 628
Bsu15I ATCGAT 1 cut(s) 702
BsuI GTATCC 1 cut(s) 663
BsuRI GGCC 2 cut(s) 388, 601
BsuTUI ATCGAT 1 cut(s) 702
BtgZI GCGATG 2 cut(s) 587, 1300
BtrI CACGTC 2 cut(s) 300, 1132
BtsCI GGATG 6 cut(s) 217, 295, 434, 513, 602, 1183
BtsI GCAGTG 2 cut(s) 672, 1326
BtsIMutI CAGTG 3 cut(s) 672, 870, 1326
BveI ACCTGC 2 cut(s) 778, 1119
Cac8I GCNNGC 1 cut(s) 412
Cfr10I RCCGGY 1 cut(s) 487
Cfr13I GGNCC 8 cut(s) 225, 370, 387, 600, 798, 1108, 1150, 1242
ClaI ATCGAT 1 cut(s) 702
CseI GACGC 1 cut(s) 250
CsiI ACCWGGT 1 cut(s) 310
Csp6I GTAC 7 cut(s) 105, 269, 457, 491, 660, 919, 953
CviAII CATG 2 cut(s) 328, 565
CviQI GTAC 7 cut(s) 105, 269, 457, 491, 660, 919, 953
DdeI CTNAG 4 cut(s) 55, 383, 1058, 1161
DpnI GATC 6 cut(s) 582, 701, 705, 1014, 1037, 1182
DpnII GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
DraIII CACNNNGTG 1 cut(s) 1198
Eam1104I CTCTTC 4 cut(s) 207, 1166, 1294, 1300
EarI CTCTTC 4 cut(s) 207, 1166, 1294, 1300
Eco105I TACGTA 1 cut(s) 272
Eco31I GGTCTC 2 cut(s) 125, 388
Eco47I GGWCC 6 cut(s) 225, 370, 798, 1108, 1150, 1242
Eco57I CTGAAG 2 cut(s) 503, 1037
Eco72I CACGTG 1 cut(s) 1195
Eco88I CYCGRG 3 cut(s) 26, 108, 254
Eco91I GGTNACC 1 cut(s) 790
EcoNI CCTNNNNNAGG 2 cut(s) 58, 423
EcoO109I RGGNCCY 4 cut(s) 387, 798, 1108, 1242
EcoO65I GGTNACC 1 cut(s) 790
EcoRI GAATTC 1 cut(s) 163
EcoRII CCWGG 7 cut(s) 310, 459, 618, 794, 1074, 1245, 1290
Esp3I CGTCTC 1 cut(s) 268
FaeI CATG 2 cut(s) 331, 568
FalI AAGNNNNNCTT 4 cut(s) 366, 398, 886, 918
FaqI GGGAC 3 cut(s) 540, 695, 1228
FatI CATG 2 cut(s) 327, 564
FauI CCCGC 1 cut(s) 1231
FbaI TGATCA 1 cut(s) 1035
FblI GTMKAC 2 cut(s) 627, 867
Fnu4HI GCNGC 4 cut(s) 551, 554, 1115, 1332
FokI GGATG 6 cut(s) 204, 302, 441, 520, 609, 1190
Fsp4HI GCNGC 4 cut(s) 551, 554, 1115, 1332
GluI GCNGC 4 cut(s) 551, 554, 1115, 1332
GsuI CTGGAG 1 cut(s) 1097
HaeIII GGCC 2 cut(s) 388, 601
HgaI GACGC 1 cut(s) 250
Hin1I GRCGYC 2 cut(s) 261, 713
Hin1II CATG 2 cut(s) 331, 568
HincII GTYRAC 1 cut(s) 534
HindII GTYRAC 1 cut(s) 534
HinfI GANTC 4 cut(s) 38, 250, 1145, 1311
HpaI GTTAAC 1 cut(s) 534
HphI GGTGA 5 cut(s) 250, 331, 513, 676, 1210
Hpy166II GTNNAC 4 cut(s) 534, 628, 672, 868
Hpy188I TCNGA 7 cut(s) 58, 160, 370, 1017, 1059, 1150, 1164
Hpy188III TCNNGA 4 cut(s) 168, 228, 254, 814
Hpy8I GTNNAC 4 cut(s) 534, 628, 672, 868
Hpy99I CGWCG 2 cut(s) 718, 755
HpyAV CCTTC 4 cut(s) 170, 325, 979, 1270
HpyCH4III ACNGT 7 cut(s) 202, 477, 495, 531, 632, 664, 874
HpyCH4IV ACGT 7 cut(s) 271, 299, 668, 713, 1131, 1194, 1343
HpyCH4V TGCA 4 cut(s) 414, 677, 860, 1331
HpyF10VI GCNNNNNNNGC 3 cut(s) 92, 598, 1337
HpyF3I CTNAG 4 cut(s) 55, 383, 1058, 1161
HpySE526I ACGT 7 cut(s) 271, 299, 668, 713, 1131, 1194, 1343
Hsp92I GRCGYC 2 cut(s) 261, 713
Hsp92II CATG 2 cut(s) 331, 568
KflI GGGWCCC 1 cut(s) 1242
Kpn2I TCCGGA 1 cut(s) 227
KpnI GGTACC 1 cut(s) 108
Ksp22I TGATCA 1 cut(s) 1035
KspAI GTTAAC 1 cut(s) 534
Kzo9I GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
LguI GCTCTTC 1 cut(s) 207
LmnI GCTCC 1 cut(s) 379
Lsp1109I GCAGC 3 cut(s) 565, 1101, 1343
LweI GCATC 4 cut(s) 73, 226, 498, 681
MabI ACCWGGT 1 cut(s) 310
MaeII ACGT 7 cut(s) 271, 299, 668, 713, 1131, 1194, 1343
MaeIII GTNAC 7 cut(s) 471, 477, 634, 664, 790, 1198, 1324
MalI GATC 6 cut(s) 582, 701, 705, 1014, 1037, 1182
MboI GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
MboII GAAGA 9 cut(s) 132, 224, 736, 902, 1007, 1010, 1183, 1311, 1317
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 2 cut(s) 120, 1194
MluCI AATT 2 cut(s) 5, 163
MlyI GAGTC 2 cut(s) 47, 1154
MmeI TCCRAC 1 cut(s) 1128
MroI TCCGGA 1 cut(s) 227
MseI TTAA 4 cut(s) 353, 533, 833, 1119
MspCI CTTAAG 1 cut(s) 1118
MvaI CCWGG 7 cut(s) 312, 461, 620, 796, 1076, 1247, 1292
MwoI GCNNNNNNNGC 3 cut(s) 92, 598, 1337
NciI CCSGG 6 cut(s) 122, 222, 399, 525, 657, 1189
NdeII GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
NlaIII CATG 2 cut(s) 331, 568
NlaIV GGNNCC 8 cut(s) 106, 119, 226, 309, 818, 1152, 1243, 1244
NmuCI GTSAC 4 cut(s) 634, 664, 1198, 1324
NspI RCATGY 1 cut(s) 568
PaeR7I CTCGAG 1 cut(s) 254
PciSI GCTCTTC 1 cut(s) 207
PfeI GAWTC 2 cut(s) 250, 1311
PkrI GCNGC 4 cut(s) 552, 555, 1116, 1333
PleI GAGTC 2 cut(s) 46, 1153
PmaCI CACGTG 1 cut(s) 1195
PmlI CACGTG 1 cut(s) 1195
PpsI GAGTC 2 cut(s) 46, 1153
Ppu21I YACGTR 2 cut(s) 272, 1195
PpuMI RGGWCCY 3 cut(s) 798, 1108, 1242
Psp5II RGGWCCY 3 cut(s) 798, 1108, 1242
Psp6I CCWGG 7 cut(s) 310, 459, 618, 794, 1074, 1245, 1290
PspCI CACGTG 1 cut(s) 1195
PspEI GGTNACC 1 cut(s) 790
PspGI CCWGG 7 cut(s) 310, 459, 618, 794, 1074, 1245, 1290
PspN4I GGNNCC 8 cut(s) 106, 119, 226, 309, 818, 1152, 1243, 1244
PspPI GGNCC 8 cut(s) 225, 370, 387, 600, 798, 1108, 1150, 1242
PspPPI RGGWCCY 3 cut(s) 798, 1108, 1242
PsrI GAACNNNNNNTAC 2 cut(s) 440, 472
PstI CTGCAG 1 cut(s) 1333
PsuI RGATCY 1 cut(s) 580
RsaI GTAC 7 cut(s) 106, 270, 458, 492, 661, 920, 954
RsaNI GTAC 7 cut(s) 105, 269, 457, 491, 660, 919, 953
SapI GCTCTTC 1 cut(s) 207
SaqAI TTAA 4 cut(s) 353, 533, 833, 1119
SatI GCNGC 4 cut(s) 551, 554, 1115, 1332
Sau3AI GATC 6 cut(s) 580, 699, 703, 1012, 1035, 1180
Sau96I GGNCC 8 cut(s) 225, 370, 387, 600, 798, 1108, 1150, 1242
SchI GAGTC 2 cut(s) 47, 1154
SduI GDGCHC 2 cut(s) 120, 1194
SexAI ACCWGGT 1 cut(s) 310
SfaNI GCATC 4 cut(s) 73, 226, 498, 681
SfcI CTRYAG 2 cut(s) 1214, 1329
Sfr274I CTCGAG 1 cut(s) 254
SinI GGWCC 6 cut(s) 225, 370, 798, 1108, 1150, 1242
SlaI CTCGAG 1 cut(s) 254
SmlI CTYRAG 3 cut(s) 254, 391, 1118
SmoI CTYRAG 3 cut(s) 254, 391, 1118
SnaBI TACGTA 1 cut(s) 272
Sse9I AATT 2 cut(s) 5, 163
SsiI CCGC 4 cut(s) 102, 135, 550, 1238
TaaI ACNGT 7 cut(s) 202, 477, 495, 531, 632, 664, 874
TaiI ACGT 7 cut(s) 274, 302, 671, 716, 1134, 1197, 1346
TaqI TCGA 4 cut(s) 255, 702, 1100, 1209
TasI AATT 2 cut(s) 5, 163
TauI GCSGC 1 cut(s) 553
TfiI GAWTC 2 cut(s) 250, 1311
Tru1I TTAA 4 cut(s) 353, 533, 833, 1119
Tru9I TTAA 4 cut(s) 353, 533, 833, 1119
TscAI CASTG 3 cut(s) 679, 877, 1333
TseFI GTSAC 4 cut(s) 634, 664, 1198, 1324
TseI GCWGC 3 cut(s) 553, 1114, 1331
Tsp45I GTSAC 4 cut(s) 634, 664, 1198, 1324
TspDTI ATGAA 4 cut(s) 306, 344, 1065, 1303
TspGWI ACGGA 1 cut(s) 868
TspRI CASTG 3 cut(s) 679, 877, 1333
Vha464I CTTAAG 1 cut(s) 1118
VpaK11BI GGWCC 6 cut(s) 225, 370, 798, 1108, 1150, 1242
XagI CCTNNNNNAGG 2 cut(s) 58, 423
XapI RAATTY 1 cut(s) 163
XceI RCATGY 1 cut(s) 568
XhoI CTCGAG 1 cut(s) 254
XmiI GTMKAC 2 cut(s) 627, 867
ZraI GACGTC 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.