Rmu_sc0000596.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000596.1
OG0000087
Physical Location & Seq
Forward (+)
172547 .. 174791
2245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000596.1_g000032.1.cds

Sequence Viewer

Length: 1932 bp
atgaatttctgggtttgggataggctaaccctcgtgcttctggttccagatatagcaagatttgaggttcccggtaccgtaattaggatggaatcagaagccaggagtggggatacgggatcgtcgtatcagtcttctgccaggcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagtggagaacatggggtcctcgactggggtgttctcagagagtagtggggagtccgacgagggagagagtgagggtggatctgcggaggctccggtagtcacagtggctattcccgagggcattcctaagccgaggtacacgcttgcgaacgggaccgtatgcgacgaacctgggagaagcatgacgatgaaggagatcgtagacatgcggctgaagtgggggataccggacgcagtggagcttaggccacttagggatggggagatggccgcgaattctgccccagggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctacccaggtgtctacagtatctgttgcggatgctgaacctgtcaccggggcagctgaccccgaatgccgttcgccaaatatatagtatgatggctatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcggtacaccgggtattgtactcaaggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccactagttaccgatatgcctacctcgatgagcaaaaggatggatgacgctcaactgatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggtcaaaaggcacgagtaggtccattgaagagacccttttggagataaccgatgagggatacggtgaacctgatcccgacgctcctgtggctcaccccgtgcagccctccatggccgatgtcattacgatagatgacaccggaatggaaaaagtaccagcctctgtgcctatctcttctcgttctactgggagcgatgaggcgctactccctggtgagaagaagagatcccacaagcaccggtgtcgaactgataaggaggtgacgtacactggccgggatgtccagggtaccgctgcgaagaggcaaaagaaagatcacccgggatcagggccgtcaccttcccttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgaacgaatacggggtcgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcgatgatgcgggcactctttaatgtgtacgccatcgacgccagcgaggaggatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtaccttcatggcgagaaggccaagctggagaaggagagggactcgttgagggctgagatggccgcctctaagcagcggattgcggagcttgagggcgaggttgctgaggcgcgggaggaggtaaagaatgcccgggactccgagaagaagactgcagagtctgccgtctcatggaaggagaaagcagactctctggaggatcgcctacccgaggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatctccatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtagctgccgggtatctagatgaggccaaattcaggcggggtctcctggagaaaaggaaaaaagagctggaggcggcgggcaagtctggtgccggcgggtctcagagtaccgatggggatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

643

Amino Acids

71.14

Weight (kDa)

5.13

Isoelectric Point (pI)

42.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1471
AasI GACNNNNNNGTC 1 cut(s) 1645
AatII GACGTC 1 cut(s) 852
Acc36I ACCTGC 1 cut(s) 1471
Acc65I GGTACC 3 cut(s) 74, 168, 1148
AccB1I GGYRCC 4 cut(s) 74, 168, 1148, 1892
AccB7I CCANNNNNTGG 1 cut(s) 193
AccI GTMKAC 4 cut(s) 183, 393, 541, 852
AccII CGCG 4 cut(s) 464, 672, 674, 1600
AclWI GGATC 8 cut(s) 127, 277, 926, 1080, 1192, 1320, 1695, 1929
AcoI YGGCCR 4 cut(s) 459, 972, 1132, 1548
AcsI RAATTY 3 cut(s) 4, 466, 1832
AcuI CTGAAG 4 cut(s) 171, 425, 1337, 1472
AcyI GRCGYC 2 cut(s) 849, 1428
AdeI CACNNNGTG 1 cut(s) 958
AgeI ACCGGT 2 cut(s) 165, 1098
AgsI TTSAA 1 cut(s) 887
AhdI GACNNNNNGTC 1 cut(s) 859
AhlI ACTAGT 1 cut(s) 751
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
Alw26I GTCTC 5 cut(s) 884, 1382, 1660, 1850, 1908
AlwI GGATC 8 cut(s) 127, 277, 926, 1080, 1192, 1320, 1695, 1929
AlwNI CAGNNNCTG 4 cut(s) 550, 1022, 1261, 1649
Ama87I CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
ApoI RAATTY 3 cut(s) 4, 466, 1832
ArsI GACNNNNNNTTYG 2 cut(s) 1260, 1292
AsiGI ACCGGT 2 cut(s) 165, 1098
Asp718I GGTACC 3 cut(s) 74, 168, 1148
AspA2I CCTAGG 2 cut(s) 172, 856
AspLEI GCGC 4 cut(s) 490, 674, 1063, 1600
AspS9I GGNCC 6 cut(s) 207, 345, 631, 879, 1190, 1299
AsuHPI GGTGA 9 cut(s) 564, 733, 935, 944, 1085, 1132, 1169, 1188, 1495
AvaI CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
AvaII GGWCC 5 cut(s) 207, 345, 631, 879, 1299
AvrII CCTAGG 2 cut(s) 172, 856
BaeGI GKGCMC 1 cut(s) 1405
BanI GGYRCC 4 cut(s) 74, 168, 1148, 1892
BauI CACGAG 4 cut(s) 32, 494, 871, 1709
BbsI GAAGAC 2 cut(s) 126, 1643
BbvCI CCTCAGC 1 cut(s) 1593
BceAI ACGGC 6 cut(s) 581, 1177, 1208, 1359, 1637, 1700
BcgI CGANNNNNNTGC 2 cut(s) 1085, 1119
BciVI GTATCC 4 cut(s) 106, 408, 911, 1435
BcoDI GTCTC 5 cut(s) 884, 1382, 1660, 1850, 1908
BcuI ACTAGT 1 cut(s) 751
BfaI CTAG 5 cut(s) 173, 735, 752, 857, 1820
BfmI CTRYAG 2 cut(s) 542, 1641
BfoI RGCGCY 2 cut(s) 491, 1064
BfuAI ACCTGC 1 cut(s) 1471
BfuI GTATCC 4 cut(s) 106, 408, 911, 1435
BlnI CCTAGG 2 cut(s) 172, 856
Bme18I GGWCC 5 cut(s) 207, 345, 631, 879, 1299
BmeRI GACNNNNNGTC 1 cut(s) 859
BmeT110I CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
BmgT120I GGNCC 6 cut(s) 207, 345, 631, 879, 1190, 1299
BmrI ACTGGG 2 cut(s) 225, 1056
BmsI GCATC 3 cut(s) 549, 823, 1386
BmuI ACTGGG 2 cut(s) 225, 1056
BpiI GAAGAC 2 cut(s) 126, 1643
BplI GAGNNNNNCTC 4 cut(s) 1514, 1546, 1733, 1765
BpmI CTGGAG 4 cut(s) 1535, 1703, 1871, 1892
Bpu10I CCTNAGC 3 cut(s) 318, 434, 1593
BpuEI CTTGAG 2 cut(s) 679, 1598
Bsa29I ATCGAT 1 cut(s) 1391
BsaBI GATNNNNATC 2 cut(s) 1446, 1920
BsaHI GRCGYC 2 cut(s) 849, 1428
BsaI GGTCTC 3 cut(s) 884, 1850, 1908
BsaWI WCCGGW 6 cut(s) 165, 283, 418, 998, 1098, 1228
BsaXI ACNNNNNCTCC 4 cut(s) 1109, 1139, 1715, 1745
Bse118I RCCGGY 3 cut(s) 165, 1098, 1895
Bse1I ACTGG 3 cut(s) 220, 1051, 1135
Bse8I GATNNNNATC 2 cut(s) 1446, 1920
BseCI ATCGAT 1 cut(s) 1391
BseGI GGATG 6 cut(s) 93, 454, 564, 792, 796, 1144
BseJI GATNNNNATC 2 cut(s) 1446, 1920
BseMII CTCAG 5 cut(s) 240, 1533, 1584, 1749, 1919
BseNI ACTGG 3 cut(s) 220, 1051, 1135
BseRI GAGGAG 5 cut(s) 1451, 1472, 1619, 1715, 1736
BseSI GKGCMC 1 cut(s) 1405
BsgI GTGCAG 3 cut(s) 476, 824, 980
Bsh1236I CGCG 4 cut(s) 464, 672, 674, 1600
Bsh1285I CGRYCG 2 cut(s) 166, 1336
BshNI GGYRCC 4 cut(s) 74, 168, 1148, 1892
BshTI ACCGGT 2 cut(s) 165, 1098
BshVI ATCGAT 1 cut(s) 1391
BsiEI CGRYCG 2 cut(s) 166, 1336
BsiHKCI CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
BslFI GGGAC 4 cut(s) 358, 644, 1541, 1637
BsmAI GTCTC 5 cut(s) 884, 1382, 1660, 1850, 1908
BsmBI CGTCTC 2 cut(s) 1382, 1660
BsmFI GGGAC 4 cut(s) 358, 644, 1541, 1637
BsmI GAATGC 3 cut(s) 312, 598, 1621
Bso31I GGTCTC 3 cut(s) 884, 1850, 1908
BsoBI CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
Bsp1286I GDGCHC 1 cut(s) 1405
Bsp19I CCATGG 1 cut(s) 969
BspCNI CTCAG 5 cut(s) 239, 1534, 1585, 1748, 1918
BspDI ATCGAT 1 cut(s) 1391
BspFNI CGCG 4 cut(s) 464, 672, 674, 1600
BspHI TCATGA 1 cut(s) 1785
BspMAI CTGCAG 1 cut(s) 1645
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 8 cut(s) 127, 277, 926, 1080, 1192, 1320, 1695, 1929
BspT107I GGYRCC 4 cut(s) 74, 168, 1148, 1892
BspTNI GGTCTC 3 cut(s) 884, 1850, 1908
BsrFI RCCGGY 3 cut(s) 165, 1098, 1895
BsrI ACTGG 3 cut(s) 220, 1051, 1135
BssAI RCCGGY 3 cut(s) 165, 1098, 1895
BssNI GRCGYC 2 cut(s) 849, 1428
BssSI CACGAG 4 cut(s) 32, 494, 871, 1709
BssT1I CCWWGG 5 cut(s) 172, 511, 856, 969, 1204
Bst2BI CACGAG 4 cut(s) 32, 494, 871, 1709
Bst4CI ACNGT 6 cut(s) 79, 295, 349, 546, 721, 923
Bst6I CTCTTC 4 cut(s) 882, 1039, 1076, 1154
BstACI GRCGYC 2 cut(s) 849, 1428
BstAPI GCANNNNNTGC 1 cut(s) 1649
BstC8I GCNNGC 8 cut(s) 147, 336, 641, 1401, 1432, 1758, 1882, 1897
BstDEI CTNAG 9 cut(s) 226, 318, 434, 443, 1542, 1557, 1593, 1735, 1905
BstDSI CCRYGG 2 cut(s) 969, 1716
BstEII GGTNACC 1 cut(s) 721
BstENI CCTNNNNNAGG 1 cut(s) 1697
BstF5I GGATG 6 cut(s) 93, 454, 564, 792, 796, 1144
BstFNI CGCG 4 cut(s) 464, 672, 674, 1600
BstH2I RGCGCY 2 cut(s) 491, 1064
BstHHI GCGC 4 cut(s) 490, 674, 1063, 1600
BstMAI GTCTC 5 cut(s) 884, 1382, 1660, 1850, 1908
BstMCI CGRYCG 2 cut(s) 166, 1336
BstMWI GCNNNNNNNGC 9 cut(s) 146, 470, 649, 947, 1252, 1303, 1427, 1547, 1649
BstNSI RCATGY 2 cut(s) 400, 814
BstPI GGTNACC 1 cut(s) 721
BstSFI CTRYAG 2 cut(s) 542, 1641
BstSLI GKGCMC 1 cut(s) 1405
BstUI CGCG 4 cut(s) 464, 672, 674, 1600
BstV2I GAAGAC 2 cut(s) 126, 1643
BstX2I RGATCY 3 cut(s) 269, 1085, 1312
BstYI RGATCY 3 cut(s) 269, 1085, 1312
Bsu15I ATCGAT 1 cut(s) 1391
BsuI GTATCC 4 cut(s) 106, 408, 911, 1435
BsuTUI ATCGAT 1 cut(s) 1391
BtgI CCRYGG 2 cut(s) 969, 1716
BtgZI GCGATG 1 cut(s) 1068
BtsCI GGATG 6 cut(s) 93, 454, 564, 792, 796, 1144
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 3 cut(s) 300, 432, 1128
BveI ACCTGC 1 cut(s) 1471
Cac8I GCNNGC 8 cut(s) 147, 336, 641, 1401, 1432, 1758, 1882, 1897
CaiI CAGNNNCTG 4 cut(s) 550, 1022, 1261, 1649
CciI TCATGA 1 cut(s) 1785
CfoI GCGC 4 cut(s) 490, 674, 1063, 1600
Cfr10I RCCGGY 3 cut(s) 165, 1098, 1895
Cfr13I GGNCC 6 cut(s) 207, 345, 631, 879, 1190, 1299
Cfr9I CCCGGG 3 cut(s) 1180, 1383, 1620
ClaI ATCGAT 1 cut(s) 1391
CseI GACGC 4 cut(s) 431, 803, 947, 1436
CspAI ACCGGT 2 cut(s) 165, 1098
DdeI CTNAG 9 cut(s) 226, 318, 434, 443, 1542, 1557, 1593, 1735, 1905
DraIII CACNNNGTG 1 cut(s) 958
DrdI GACNNNNNNGTC 1 cut(s) 1645
DriI GACNNNNNGTC 1 cut(s) 859
DseDI GACNNNNNNGTC 1 cut(s) 1645
EaeI YGGCCR 4 cut(s) 459, 972, 1132, 1548
Eam1104I CTCTTC 4 cut(s) 882, 1039, 1076, 1154
Eam1105I GACNNNNNGTC 1 cut(s) 859
EarI CTCTTC 4 cut(s) 882, 1039, 1076, 1154
Eco130I CCWWGG 5 cut(s) 172, 511, 856, 969, 1204
Eco31I GGTCTC 3 cut(s) 884, 1850, 1908
Eco32I GATATC 1 cut(s) 1324
Eco47I GGWCC 5 cut(s) 207, 345, 631, 879, 1299
Eco57I CTGAAG 4 cut(s) 171, 425, 1337, 1472
Eco88I CYCGRG 5 cut(s) 305, 1180, 1383, 1620, 1697
Eco91I GGTNACC 1 cut(s) 721
EcoNI CCTNNNNNAGG 1 cut(s) 1697
EcoO109I RGGNCCY 2 cut(s) 207, 631
EcoO65I GGTNACC 1 cut(s) 721
EcoRI GAATTC 1 cut(s) 466
EcoRV GATATC 1 cut(s) 1324
EcoT14I CCWWGG 5 cut(s) 172, 511, 856, 969, 1204
ErhI CCWWGG 5 cut(s) 172, 511, 856, 969, 1204
Esp3I CGTCTC 2 cut(s) 1382, 1660
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 4 cut(s) 358, 644, 1541, 1637
FauI CCCGC 7 cut(s) 706, 1228, 1392, 1593, 1833, 1873, 1892
FblI GTMKAC 4 cut(s) 183, 393, 541, 852
FokI GGATG 6 cut(s) 100, 461, 571, 799, 803, 1151
FspBI CTAG 5 cut(s) 173, 735, 752, 857, 1820
GlaI GCGC 4 cut(s) 489, 673, 1062, 1599
GsuI CTGGAG 4 cut(s) 1535, 1703, 1871, 1892
HaeII RGCGCY 2 cut(s) 491, 1064
HgaI GACGC 4 cut(s) 431, 803, 947, 1436
HhaI GCGC 4 cut(s) 490, 674, 1063, 1600
Hin1I GRCGYC 2 cut(s) 849, 1428
Hin6I GCGC 4 cut(s) 488, 672, 1061, 1598
HinP1I GCGC 4 cut(s) 488, 672, 1061, 1598
HincII GTYRAC 1 cut(s) 853
HindII GTYRAC 1 cut(s) 853
HinfI GANTC 9 cut(s) 92, 242, 499, 1369, 1388, 1529, 1625, 1646, 1676
HphI GGTGA 9 cut(s) 564, 733, 935, 944, 1085, 1132, 1169, 1188, 1495
Hpy188I TCNGA 8 cut(s) 97, 229, 247, 1317, 1452, 1630, 1738, 1908
Hpy188III TCNNGA 6 cut(s) 47, 305, 935, 1682, 1786, 1820
Hpy99I CGWCG 7 cut(s) 127, 251, 359, 851, 854, 941, 1430
HpyAV CCTTC 9 cut(s) 376, 663, 1209, 1312, 1447, 1498, 1502, 1513, 1657
HpyCH4III ACNGT 6 cut(s) 79, 295, 349, 546, 721, 923
HpyCH4IV ACGT 2 cut(s) 849, 1124
HpyCH4V TGCA 4 cut(s) 493, 841, 961, 1643
HpyF10VI GCNNNNNNNGC 9 cut(s) 146, 470, 649, 947, 1252, 1303, 1427, 1547, 1649
HpyF3I CTNAG 9 cut(s) 226, 318, 434, 443, 1542, 1557, 1593, 1735, 1905
HpySE526I ACGT 2 cut(s) 849, 1124
Hsp92I GRCGYC 2 cut(s) 849, 1428
HspAI GCGC 4 cut(s) 488, 672, 1061, 1598
KpnI GGTACC 3 cut(s) 78, 172, 1152
KroI GCCGGC 1 cut(s) 1895
KroNI GCCGGC 1 cut(s) 1897
LmnI GCTCC 6 cut(s) 286, 430, 510, 946, 1050, 1573
LweI GCATC 3 cut(s) 549, 823, 1386
MaeI CTAG 5 cut(s) 173, 735, 752, 857, 1820
MaeII ACGT 2 cut(s) 849, 1124
MaeIII GTNAC 6 cut(s) 289, 570, 721, 754, 1120, 1194
MboII GAAGA 9 cut(s) 126, 842, 899, 1026, 1090, 1093, 1171, 1645, 1648
MflI RGATCY 3 cut(s) 269, 1085, 1312
MhlI GDGCHC 1 cut(s) 1405
MluCI AATT 5 cut(s) 4, 81, 188, 466, 1832
MlyI GAGTC 5 cut(s) 251, 1523, 1619, 1655, 1670
MmeI TCCRAC 1 cut(s) 270
MroNI GCCGGC 1 cut(s) 1895
MseI TTAA 2 cut(s) 1410, 1794
MslI CAYNNNNRTG 3 cut(s) 377, 815, 1001
MspA1I CMGCKG 4 cut(s) 583, 1154, 1258, 1564
Mva1269I GAATGC 3 cut(s) 312, 598, 1621
MvnI CGCG 4 cut(s) 464, 672, 674, 1600
MwoI GCNNNNNNNGC 9 cut(s) 146, 470, 649, 947, 1252, 1303, 1427, 1547, 1649
NaeI GCCGGC 1 cut(s) 1897
NcoI CCATGG 1 cut(s) 969
NgoMIV GCCGGC 1 cut(s) 1895
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 5 cut(s) 289, 570, 721, 1120, 1194
NspI RCATGY 2 cut(s) 400, 814
PagI TCATGA 1 cut(s) 1785
PaqCI CACCTGC 1 cut(s) 1471
PasI CCCWGGG 1 cut(s) 476
PcsI WCGNNNNNNNCGW 3 cut(s) 122, 1278, 1431
PctI GAATGC 3 cut(s) 312, 598, 1621
PdiI GCCGGC 1 cut(s) 1897
PfeI GAWTC 4 cut(s) 92, 499, 1369, 1388
PflMI CCANNNNNTGG 1 cut(s) 193
PfoI TCCNGGA 1 cut(s) 1848
PinAI ACCGGT 2 cut(s) 165, 1098
PleI GAGTC 5 cut(s) 250, 1523, 1619, 1654, 1670
PpsI GAGTC 5 cut(s) 250, 1523, 1619, 1654, 1670
PpuMI RGGWCCY 2 cut(s) 207, 631
Psp5II RGGWCCY 2 cut(s) 207, 631
PspEI GGTNACC 1 cut(s) 721
PspPI GGNCC 6 cut(s) 207, 345, 631, 879, 1190, 1299
PspPPI RGGWCCY 2 cut(s) 207, 631
PstI CTGCAG 1 cut(s) 1645
PstNI CAGNNNCTG 4 cut(s) 550, 1022, 1261, 1649
PsuI RGATCY 3 cut(s) 269, 1085, 1312
PvuII CAGCTG 2 cut(s) 583, 1258
RseI CAYNNNNRTG 3 cut(s) 377, 815, 1001
SalI GTCGAC 1 cut(s) 851
SaqAI TTAA 2 cut(s) 1410, 1794
Sau96I GGNCC 6 cut(s) 207, 345, 631, 879, 1190, 1299
SchI GAGTC 5 cut(s) 251, 1523, 1619, 1655, 1670
SduI GDGCHC 1 cut(s) 1405
SfaNI GCATC 3 cut(s) 549, 823, 1386
SfcI CTRYAG 2 cut(s) 542, 1641
SgrAI CRCCGGYG 1 cut(s) 1098
SinI GGWCC 5 cut(s) 207, 345, 631, 879, 1299
SmaI CCCGGG 3 cut(s) 1182, 1385, 1622
SmiMI CAYNNNNRTG 3 cut(s) 377, 815, 1001
SmlI CTYRAG 2 cut(s) 694, 1577
SmoI CTYRAG 2 cut(s) 694, 1577
SpeI ACTAGT 1 cut(s) 751
Sse9I AATT 5 cut(s) 4, 81, 188, 466, 1832
SspMI CTAG 5 cut(s) 173, 735, 752, 857, 1820
StyI CCWWGG 5 cut(s) 172, 511, 856, 969, 1204
TaaI ACNGT 6 cut(s) 79, 295, 349, 546, 721, 923
TaiI ACGT 2 cut(s) 852, 1127
TasI AATT 5 cut(s) 4, 81, 188, 466, 1832
TatI WGTACW 2 cut(s) 690, 1725
TauI GCSGC 5 cut(s) 403, 464, 734, 1553, 1880
TfiI GAWTC 4 cut(s) 92, 499, 1369, 1388
Tru1I TTAA 2 cut(s) 1410, 1794
Tru9I TTAA 2 cut(s) 1410, 1794
TscAI CASTG 3 cut(s) 300, 432, 1135
TseFI GTSAC 5 cut(s) 289, 570, 721, 1120, 1194
Tsp45I GTSAC 5 cut(s) 289, 570, 721, 1120, 1194
TspDTI ATGAA 5 cut(s) 17, 395, 1299, 1484, 1802
TspMI CCCGGG 3 cut(s) 1180, 1383, 1620
TspRI CASTG 3 cut(s) 300, 432, 1135
Van91I CCANNNNNTGG 1 cut(s) 193
VpaK11BI GGWCC 5 cut(s) 207, 345, 631, 879, 1299
XagI CCTNNNNNAGG 1 cut(s) 1697
XapI RAATTY 3 cut(s) 4, 466, 1832
XbaI TCTAGA 1 cut(s) 1819
XceI RCATGY 2 cut(s) 400, 814
XmaI CCCGGG 3 cut(s) 1180, 1383, 1620
XmaJI CCTAGG 2 cut(s) 172, 856
XmiI GTMKAC 4 cut(s) 183, 393, 541, 852
XspI CTAG 5 cut(s) 173, 735, 752, 857, 1820
ZraI GACGTC 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.