Rmu_sc0003244.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003244.1
OG0000087
Physical Location & Seq
Reverse (-)
34872 .. 38753
3882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003244.1_g000013.1.cds

Sequence Viewer

Length: 1419 bp
atgctagtgtggttatctttttgctttagatttttgggtttgttccattctctgggttttgctttgaagtggggagtaatccgtgcctcgaaatggtcttggttttgcatgaatttctgggtatttctgggttttggcttgaatttatgggtttttctgggttttggcttgaatttctgggttttggctaggctaacccttgtgcttctggttccagatatagagagatttgaggtccccggtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggacatcgatcggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatatgtggaggccctggtagtcacagtggccattcccgagggcataccgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgcgacttaagtgggggataccggacgcggtggatcttaggcctctcagggatggagagatggccgcgaatcctgccccggggtgggtgaagctgcacgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtatctgctgcggatgctgaacctgtccccggggcaactgaccccgaatgccattcgccaaatatacagtatgatggctatgtgggacttgtgccaacaagggtggccttccataaacgaattcaacgcggtacactgggtactgtactcaaggaagcagtcttgtgcgggtacagttacatttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtgttcctagctgggggacggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatatgctgtttggtcagagaaagagaggagctcttatagattcatccggagaaggcagaccacctggaggatagccttcccgccgagaggcacgaggccgtggaggagtaccgtggaggagtacaagtcctcggaagagctcatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaggagtgggtggcggccggatatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaggcggcggccaagtctggtgccggtgggtcccagagtaccggtggcgagcagttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

472

Amino Acids

53.61

Weight (kDa)

9.14

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 242, 1022
AccB1I GGYRCC 4 cut(s) 242, 705, 1022, 1379
AccB7I CCANNNNNTGG 1 cut(s) 52
AccI GTMKAC 1 cut(s) 497
AccII CGCG 3 cut(s) 593, 632, 842
AccIII TCCGGA 1 cut(s) 1137
AclWI GGATC 4 cut(s) 295, 369, 382, 606
AcoI YGGCCR 4 cut(s) 465, 627, 1296, 1368
AcsI RAATTY 6 cut(s) 112, 142, 172, 833, 1277, 1319
AcuI CTGAAG 1 cut(s) 339
AflII CTTAAG 1 cut(s) 572
AgeI ACCGGT 2 cut(s) 1019, 1400
AgsI TTSAA 5 cut(s) 67, 142, 172, 838, 1282
AhlI ACTAGT 1 cut(s) 919
AjnI CCWGG 5 cut(s) 269, 308, 450, 1154, 1335
AloI GAACNNNNNNTCC 2 cut(s) 359, 391
AluBI AGCT 9 cut(s) 317, 658, 673, 977, 1015, 1034, 1122, 1231, 1316
AluI AGCT 9 cut(s) 317, 658, 673, 977, 1015, 1034, 1122, 1231, 1316
Alw21I GWGCWC 2 cut(s) 1124, 1233
Alw26I GTCTC 1 cut(s) 1337
AlwI GGATC 4 cut(s) 295, 369, 382, 606
AlwNI CAGNNNCTG 1 cut(s) 718
Ama87I CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
Aor13HI TCCGGA 1 cut(s) 1137
AoxI GGCC 9 cut(s) 343, 447, 465, 605, 627, 818, 1187, 1296, 1368
ApeKI GCWGC 6 cut(s) 658, 697, 721, 1012, 1247, 1250
ApoI RAATTY 6 cut(s) 112, 142, 172, 833, 1277, 1319
AsiGI ACCGGT 2 cut(s) 1019, 1400
Asp718I GGTACC 2 cut(s) 242, 1022
AspS9I GGNCC 5 cut(s) 235, 448, 513, 1042, 1389
AsuHPI GGTGA 2 cut(s) 434, 664
AvaI CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
AvaII GGWCC 4 cut(s) 235, 513, 1042, 1389
BaeI ACNNNNGTAYC 2 cut(s) 234, 267
BalI TGGCCA 1 cut(s) 467
BamHI GGATCC 1 cut(s) 374
BanI GGYRCC 4 cut(s) 242, 705, 1022, 1379
BanII GRGCYC 2 cut(s) 1124, 1233
BauI CACGAG 2 cut(s) 662, 1183
BbsI GAAGAC 1 cut(s) 294
Bbv12I GWGCWC 2 cut(s) 1124, 1233
BbvI GCAGC 6 cut(s) 645, 684, 708, 1024, 1234, 1237
BccI CCATC 5 cut(s) 250, 503, 611, 619, 781
BceAI ACGGC 1 cut(s) 1174
BciT130I CCWGG 5 cut(s) 271, 310, 452, 1156, 1337
BciVI GTATCC 2 cut(s) 274, 576
BcoDI GTCTC 1 cut(s) 1337
BcuI ACTAGT 1 cut(s) 919
BfaI CTAG 5 cut(s) 5, 189, 903, 920, 974
BfmI CTRYAG 1 cut(s) 710
BfrI CTTAAG 1 cut(s) 572
BfuI GTATCC 2 cut(s) 274, 576
Bme18I GGWCC 4 cut(s) 235, 513, 1042, 1389
BmeT110I CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
BmgT120I GGNCC 5 cut(s) 235, 448, 513, 1042, 1389
BmrI ACTGGG 2 cut(s) 393, 859
BmsI GCATC 1 cut(s) 717
BmuI ACTGGG 2 cut(s) 393, 859
BpiI GAAGAC 1 cut(s) 294
BplI GAGNNNNNCTC 2 cut(s) 1106, 1138
BpmI CTGGAG 2 cut(s) 1177, 1358
BpuEI CTTGAG 1 cut(s) 847
Bsa29I ATCGAT 1 cut(s) 330
BsaI GGTCTC 1 cut(s) 1337
BsaWI WCCGGW 4 cut(s) 586, 1019, 1137, 1400
BsaXI ACNNNNNCTCC 2 cut(s) 1202, 1232
Bse118I RCCGGY 3 cut(s) 1019, 1382, 1400
Bse1I ACTGG 4 cut(s) 298, 388, 854, 1045
BseAI TCCGGA 1 cut(s) 1137
BseBI CCWGG 5 cut(s) 271, 310, 452, 1156, 1337
BseCI ATCGAT 1 cut(s) 330
BseGI GGATG 5 cut(s) 261, 514, 622, 732, 1134
BseMII CTCAG 1 cut(s) 625
BseNI ACTGG 4 cut(s) 298, 388, 854, 1045
BseRI GAGGAG 4 cut(s) 422, 1132, 1210, 1223
BseX3I CGGCCG 1 cut(s) 1296
BseXI GCAGC 6 cut(s) 645, 684, 708, 1024, 1234, 1237
BseYI CCCAGC 1 cut(s) 977
BsgI GTGCAG 1 cut(s) 644
Bsh1236I CGCG 3 cut(s) 593, 632, 842
Bsh1285I CGRYCG 2 cut(s) 334, 1299
BshFI GGCC 9 cut(s) 345, 449, 467, 607, 629, 820, 1189, 1298, 1370
BshNI GGYRCC 4 cut(s) 242, 705, 1022, 1379
BshTI ACCGGT 2 cut(s) 1019, 1400
BshVI ATCGAT 1 cut(s) 330
BsiEI CGRYCG 2 cut(s) 334, 1299
BsiHKAI GWGCWC 2 cut(s) 1124, 1233
BsiHKCI CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
BslFI GGGAC 7 cut(s) 221, 526, 724, 812, 996, 1055, 1375
BsmAI GTCTC 1 cut(s) 1337
BsmFI GGGAC 7 cut(s) 221, 526, 724, 812, 996, 1055, 1375
BsmI GAATGC 1 cut(s) 766
BsnI GGCC 9 cut(s) 345, 449, 467, 607, 629, 820, 1189, 1298, 1370
Bso31I GGTCTC 1 cut(s) 1337
BsoBI CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
Bsp1286I GDGCHC 2 cut(s) 1124, 1233
Bsp13I TCCGGA 1 cut(s) 1137
Bsp143I GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
BspANI GGCC 9 cut(s) 345, 449, 467, 607, 629, 820, 1189, 1298, 1370
BspCNI CTCAG 1 cut(s) 624
BspDI ATCGAT 1 cut(s) 330
BspEI TCCGGA 1 cut(s) 1137
BspFNI CGCG 3 cut(s) 593, 632, 842
BspHI TCATGA 1 cut(s) 1272
BspPI GGATC 4 cut(s) 295, 369, 382, 606
BspQI GCTCTTC 1 cut(s) 1221
BspT107I GGYRCC 4 cut(s) 242, 705, 1022, 1379
BspTI CTTAAG 1 cut(s) 572
BspTNI GGTCTC 1 cut(s) 1337
BsrFI RCCGGY 3 cut(s) 1019, 1382, 1400
BsrI ACTGG 4 cut(s) 298, 388, 854, 1045
BssAI RCCGGY 3 cut(s) 1019, 1382, 1400
BssMI GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
BssNAI GTATAC 1 cut(s) 498
BssSI CACGAG 2 cut(s) 662, 1183
BssT1I CCWWGG 1 cut(s) 679
Bst1107I GTATAC 1 cut(s) 498
Bst2BI CACGAG 2 cut(s) 662, 1183
Bst2UI CCWGG 5 cut(s) 271, 310, 452, 1156, 1337
Bst4CI ACNGT 9 cut(s) 247, 463, 517, 714, 782, 858, 889, 987, 1204
Bst6I CTCTTC 2 cut(s) 1070, 1221
BstAFI CTTAAG 1 cut(s) 572
BstC8I GCNNGC 3 cut(s) 315, 1245, 1409
BstDEI CTNAG 3 cut(s) 340, 602, 611
BstDSI CCRYGG 2 cut(s) 1190, 1203
BstF5I GGATG 5 cut(s) 261, 514, 622, 732, 1134
BstFNI CGCG 3 cut(s) 593, 632, 842
BstKTI GATC 7 cut(s) 290, 334, 355, 377, 558, 601, 1357
BstMAI GTCTC 1 cut(s) 1337
BstMBI GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
BstMCI CGRYCG 2 cut(s) 334, 1299
BstMWI GCNNNNNNNGC 5 cut(s) 314, 638, 697, 727, 1244
BstNI CCWGG 5 cut(s) 271, 310, 452, 1156, 1337
BstNSI RCATGY 2 cut(s) 568, 934
BstSFI CTRYAG 1 cut(s) 710
BstUI CGCG 3 cut(s) 593, 632, 842
BstV1I GCAGC 6 cut(s) 645, 684, 708, 1024, 1234, 1237
BstV2I GAAGAC 1 cut(s) 294
BstX2I RGATCY 2 cut(s) 374, 598
BstYI RGATCY 2 cut(s) 374, 598
BstZ17I GTATAC 1 cut(s) 498
BstZI CGGCCG 1 cut(s) 1296
Bsu15I ATCGAT 1 cut(s) 330
BsuI GTATCC 2 cut(s) 274, 576
BsuRI GGCC 9 cut(s) 345, 449, 467, 607, 629, 820, 1189, 1298, 1370
BsuTUI ATCGAT 1 cut(s) 330
BtgI CCRYGG 2 cut(s) 1190, 1203
BtgZI GCGATG 1 cut(s) 1219
BtsCI GGATG 5 cut(s) 261, 514, 622, 732, 1134
BtsIMutI CAGTG 2 cut(s) 468, 847
Cac8I GCNNGC 3 cut(s) 315, 1245, 1409
CaiI CAGNNNCTG 1 cut(s) 718
CciI TCATGA 1 cut(s) 1272
Cfr10I RCCGGY 3 cut(s) 1019, 1382, 1400
Cfr13I GGNCC 5 cut(s) 235, 448, 513, 1042, 1389
Cfr9I CCCGGG 4 cut(s) 530, 643, 742, 1086
ClaI ATCGAT 1 cut(s) 330
CseI GACGC 1 cut(s) 599
CspAI ACCGGT 2 cut(s) 1019, 1400
CspCI CAANNNNNGTGG 2 cut(s) 797, 832
CviAII CATG 4 cut(s) 109, 565, 931, 1273
DdeI CTNAG 3 cut(s) 340, 602, 611
DpnI GATC 7 cut(s) 289, 333, 354, 376, 557, 600, 1356
DpnII GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
EaeI YGGCCR 4 cut(s) 465, 627, 1296, 1368
EagI CGGCCG 1 cut(s) 1296
Eam1104I CTCTTC 2 cut(s) 1070, 1221
EarI CTCTTC 2 cut(s) 1070, 1221
Ecl136II GAGCTC 2 cut(s) 1122, 1231
EclXI CGGCCG 1 cut(s) 1296
Eco130I CCWWGG 1 cut(s) 679
Eco147I AGGCCT 1 cut(s) 607
Eco24I GRGCYC 2 cut(s) 1124, 1233
Eco31I GGTCTC 1 cut(s) 1337
Eco47I GGWCC 4 cut(s) 235, 513, 1042, 1389
Eco52I CGGCCG 1 cut(s) 1296
Eco53kI GAGCTC 2 cut(s) 1122, 1231
Eco57I CTGAAG 1 cut(s) 339
Eco88I CYCGRG 5 cut(s) 473, 530, 643, 742, 1086
EcoICRI GAGCTC 2 cut(s) 1122, 1231
EcoO109I RGGNCCY 3 cut(s) 235, 448, 1389
EcoRI GAATTC 1 cut(s) 833
EcoRII CCWGG 5 cut(s) 269, 308, 450, 1154, 1335
EcoT14I CCWWGG 1 cut(s) 679
EcoT38I GRGCYC 2 cut(s) 1124, 1233
ErhI CCWWGG 1 cut(s) 679
FaeI CATG 4 cut(s) 112, 568, 934, 1276
FaqI GGGAC 7 cut(s) 221, 526, 724, 812, 996, 1055, 1375
FatI CATG 4 cut(s) 108, 564, 930, 1272
FauI CCCGC 3 cut(s) 874, 1179, 1320
FblI GTMKAC 1 cut(s) 497
FokI GGATG 5 cut(s) 268, 521, 629, 739, 1121
FriOI GRGCYC 2 cut(s) 1124, 1233
FspBI CTAG 5 cut(s) 5, 189, 903, 920, 974
GsaI CCCAGC 1 cut(s) 981
GsuI CTGGAG 2 cut(s) 1177, 1358
HaeIII GGCC 9 cut(s) 345, 449, 467, 607, 629, 820, 1189, 1298, 1370
HgaI GACGC 1 cut(s) 599
Hin1II CATG 4 cut(s) 112, 568, 934, 1276
HinfI GANTC 5 cut(s) 260, 410, 634, 667, 1131
HphI GGTGA 2 cut(s) 434, 664
Hpy166II GTNNAC 3 cut(s) 325, 498, 847
Hpy188I TCNGA 6 cut(s) 265, 397, 415, 1063, 1108, 1225
Hpy188III TCNNGA 5 cut(s) 215, 473, 1138, 1273, 1358
Hpy8I GTNNAC 3 cut(s) 325, 498, 847
Hpy99I CGWCG 3 cut(s) 295, 419, 527
HpyAV CCTTC 6 cut(s) 544, 831, 945, 1036, 1137, 1177
HpyCH4III ACNGT 9 cut(s) 247, 463, 517, 714, 782, 858, 889, 987, 1204
HpyCH4V TGCA 2 cut(s) 108, 661
HpyF10VI GCNNNNNNNGC 5 cut(s) 314, 638, 697, 727, 1244
HpyF3I CTNAG 3 cut(s) 340, 602, 611
Hsp92II CATG 4 cut(s) 112, 568, 934, 1276
KflI GGGWCCC 1 cut(s) 1389
Kpn2I TCCGGA 1 cut(s) 1137
KpnI GGTACC 2 cut(s) 246, 1026
Kzo9I GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
LguI GCTCTTC 1 cut(s) 1221
LmnI GCTCC 2 cut(s) 678, 1119
Lsp1109I GCAGC 6 cut(s) 645, 684, 708, 1024, 1234, 1237
LweI GCATC 1 cut(s) 717
MaeI CTAG 5 cut(s) 5, 189, 903, 920, 974
MaeIII GTNAC 3 cut(s) 457, 889, 922
MalI GATC 7 cut(s) 289, 333, 354, 376, 557, 600, 1356
MboI GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
MboII GAAGA 4 cut(s) 294, 1087, 1238, 1360
MflI RGATCY 2 cut(s) 374, 598
MhlI GDGCHC 2 cut(s) 1124, 1233
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 8 cut(s) 112, 142, 172, 356, 833, 993, 1277, 1319
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 1 cut(s) 419
MmeI TCCRAC 1 cut(s) 438
Mox20I TGGCCA 1 cut(s) 467
MroI TCCGGA 1 cut(s) 1137
MscI TGGCCA 1 cut(s) 467
MseI TTAA 2 cut(s) 573, 996
MslI CAYNNNNRTG 2 cut(s) 563, 1238
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 2 cut(s) 697, 1015
MspCI CTTAAG 1 cut(s) 572
Mva1269I GAATGC 1 cut(s) 766
MvaI CCWGG 5 cut(s) 271, 310, 452, 1156, 1337
MvnI CGCG 3 cut(s) 593, 632, 842
MwoI GCNNNNNNNGC 5 cut(s) 314, 638, 697, 727, 1244
NdeII GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
NlaIII CATG 4 cut(s) 112, 568, 934, 1276
NmeAIII GCCGAG 3 cut(s) 371, 516, 1200
NmuCI GTSAC 1 cut(s) 457
NspI RCATGY 2 cut(s) 568, 934
PagI TCATGA 1 cut(s) 1272
PceI AGGCCT 1 cut(s) 607
PciSI GCTCTTC 1 cut(s) 1221
PcsI WCGNNNNNNNCGW 2 cut(s) 290, 377
PctI GAATGC 1 cut(s) 766
PfeI GAWTC 4 cut(s) 260, 634, 667, 1131
PflMI CCANNNNNTGG 1 cut(s) 52
PfoI TCCNGGA 1 cut(s) 1335
PinAI ACCGGT 2 cut(s) 1019, 1400
Ple19I CGATCG 1 cut(s) 334
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 2 cut(s) 235, 1389
Psp124BI GAGCTC 2 cut(s) 1124, 1233
Psp5II RGGWCCY 2 cut(s) 235, 1389
Psp6I CCWGG 5 cut(s) 269, 308, 450, 1154, 1335
PspFI CCCAGC 1 cut(s) 977
PspGI CCWGG 5 cut(s) 269, 308, 450, 1154, 1335
PspPI GGNCC 5 cut(s) 235, 448, 513, 1042, 1389
PspPPI RGGWCCY 2 cut(s) 235, 1389
PstNI CAGNNNCTG 1 cut(s) 718
PsuI RGATCY 2 cut(s) 374, 598
PvuI CGATCG 1 cut(s) 334
PvuII CAGCTG 1 cut(s) 1015
RseI CAYNNNNRTG 2 cut(s) 563, 1238
SacI GAGCTC 2 cut(s) 1124, 1233
SapI GCTCTTC 1 cut(s) 1221
SaqAI TTAA 2 cut(s) 573, 996
Sau3AI GATC 7 cut(s) 287, 331, 352, 374, 555, 598, 1354
Sau96I GGNCC 5 cut(s) 235, 448, 513, 1042, 1389
SchI GAGTC 1 cut(s) 419
SduI GDGCHC 2 cut(s) 1124, 1233
SfaNI GCATC 1 cut(s) 717
SfcI CTRYAG 1 cut(s) 710
SinI GGWCC 4 cut(s) 235, 513, 1042, 1389
SmaI CCCGGG 4 cut(s) 532, 645, 744, 1088
SmiMI CAYNNNNRTG 2 cut(s) 563, 1238
SmlI CTYRAG 2 cut(s) 572, 862
SmoI CTYRAG 2 cut(s) 572, 862
SpeI ACTAGT 1 cut(s) 919
Sse9I AATT 8 cut(s) 112, 142, 172, 356, 833, 993, 1277, 1319
SseBI AGGCCT 1 cut(s) 607
SspMI CTAG 5 cut(s) 5, 189, 903, 920, 974
SstI GAGCTC 2 cut(s) 1124, 1233
StuI AGGCCT 1 cut(s) 607
StyI CCWWGG 1 cut(s) 679
TaaI ACNGT 9 cut(s) 247, 463, 517, 714, 782, 858, 889, 987, 1204
TaqI TCGA 5 cut(s) 89, 330, 380, 561, 941
TasI AATT 8 cut(s) 112, 142, 172, 356, 833, 993, 1277, 1319
TatI WGTACW 2 cut(s) 858, 1212
TauI GCSGC 5 cut(s) 632, 902, 1298, 1367, 1370
TfiI GAWTC 4 cut(s) 260, 634, 667, 1131
Tru1I TTAA 2 cut(s) 573, 996
Tru9I TTAA 2 cut(s) 573, 996
TscAI CASTG 2 cut(s) 468, 854
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 6 cut(s) 658, 697, 721, 1012, 1247, 1250
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 5 cut(s) 125, 563, 1123, 1289, 1326
TspGWI ACGGA 1 cut(s) 71
TspMI CCCGGG 4 cut(s) 530, 643, 742, 1086
TspRI CASTG 2 cut(s) 468, 854
Van91I CCANNNNNTGG 1 cut(s) 52
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 4 cut(s) 235, 513, 1042, 1389
XapI RAATTY 6 cut(s) 112, 142, 172, 833, 1277, 1319
XceI RCATGY 2 cut(s) 568, 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 1400
XmaI CCCGGG 4 cut(s) 530, 643, 742, 1086
XmiI GTMKAC 1 cut(s) 497
XspI CTAG 5 cut(s) 5, 189, 903, 920, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.