Rmu_sc0000830.1_g000044

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000830.1
OG0000087
Physical Location & Seq
Forward (+)
172475 .. 174338
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000830.1_g000044.1.cds

Sequence Viewer

Length: 1473 bp
atgaaggaaatcatcgtgatgaggctgaagtgggggataccggacaaggtagaacttaggcctctcaaggatggtgagcttgaggcgaatcctccccggggatgggtgggcttatatcctgcggatgctgaacctatcacaggggcagctgaccccgaatgcctggcgacaaattttgagtatgatggctatgtgggacttgtgccagcaacggtggcccaccatcaaccaatttcgagcagtgtaccgggtcctatactagaggaaacagtcttgtcaagggaccgtgatgtttgccgcccgggactacgagcccctcgtcaccgatatgcctacctctcagagcaagaggccatcagggaccaatcctactcactgtccgaggttgagagacaacggatagcccgggtatatgctgtatggagtgaagaagaaagaagctcctataggttcatccggtactccgtactagataggctaagcctagggagactccccgtgaaactgccgaagaggaaaccccggaaaggtaaggaagacgacaagatgaacgacagcgtactaatggacatgcttatgagccaaggagaagatgccctgcatattgatgtcgatcttacgtcgaaggctacgggtcgctcgcttgatgaacttctccttgagattgacgacgacggataccggaagaggaaaggcaccccgggctccatatcttctctgtctgccgggtcagctgggagcgaggaagttttgctacctggtgaaaagaaaaggcaccacaagcaccgctatcggggagggaataaggaggacgttacctacactggtattgatgttaagggggtggagccaaagatgcagaagaaaaatcctccgggaccggaagcgtcgccaaggcgtaggctcttatcttcgaagattccaatagtccctaagaagcccatcaagaaattgctgagagagtacgaggtcactgacgaaaagttcgtgcactcgatgctcgccgatttgaaggatatagacctcaatagggtacgggcaaagaacaataccccacaagaggatcgtcgcctcgcctgggaatcaatgatgcgggcactattcaacatgtacgtgattgatgcgagcgaggatgatacacacttgaaggatgaggttagcagtctctccgggcaagtaaagtatcttcatggggagaagggcaagctggagaaggagcgggactccctgaagaagaagatagagtccttaactcctatgttgacagagctggaggcagcgaagcacaggattgtagagctcgaaggtgagttatctgaggcgagggatgaggttaaaagttcccgagactccgagaaggaagctgtagagtctgcgacgtcatggaaggcgagagcagaaaacctggaggaacagagagatgtttcaaaagtagataaaatcatgcttttccaccatttttatagtaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

490

Amino Acids

55.79

Weight (kDa)

6.93

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1382
AccB1I GGYRCC 2 cut(s) 695, 774
AccBSI CCGCTC 1 cut(s) 1219
AciI CCGC 5 cut(s) 122, 298, 787, 1093, 1219
AclWI GGATC 1 cut(s) 1071
AcsI RAATTY 1 cut(s) 172
AcuI CTGAAG 2 cut(s) 47, 1250
AcyI GRCGYC 1 cut(s) 1379
AfaI GTAC 7 cut(s) 246, 461, 468, 561, 965, 1035, 1112
AfiI CCNNNNNNNGG 9 cut(s) 98, 102, 103, 140, 527, 793, 1030, 1060, 1078
AflIII ACRYGT 1 cut(s) 1107
AgsI TTSAA 4 cut(s) 1012, 1105, 1147, 1428
AjnI CCWGG 4 cut(s) 162, 757, 1076, 1404
AluBI AGCT 8 cut(s) 79, 149, 441, 734, 1207, 1270, 1300, 1364
AluI AGCT 8 cut(s) 79, 149, 441, 734, 1207, 1270, 1300, 1364
Alw21I GWGCWC 2 cut(s) 993, 1302
Alw26I GTCTC 4 cut(s) 385, 484, 1169, 1341
Alw44I GTGCAC 1 cut(s) 989
AlwI GGATC 1 cut(s) 1071
Ama87I CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
AoxI GGCC 3 cut(s) 59, 216, 351
ApaLI GTGCAC 1 cut(s) 989
ApeKI GCWGC 2 cut(s) 146, 1277
ApoI RAATTY 1 cut(s) 172
ArsI GACNNNNNNTTYG 2 cut(s) 968, 1000
AspA2I CCTAGG 1 cut(s) 484
AspS9I GGNCC 5 cut(s) 217, 251, 283, 361, 878
AsuHPI GGTGA 4 cut(s) 86, 314, 773, 1319
AsuII TTCGAA 1 cut(s) 914
AvaI CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
AvaII GGWCC 4 cut(s) 251, 283, 361, 878
AvrII CCTAGG 1 cut(s) 484
BaeGI GKGCMC 2 cut(s) 993, 1099
BanI GGYRCC 2 cut(s) 695, 774
BanII GRGCYC 3 cut(s) 316, 707, 1302
BarI GAAGNNNNNNTAC 4 cut(s) 738, 770, 1170, 1202
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 2 cut(s) 993, 1302
BbvI GCAGC 2 cut(s) 158, 1289
BccI CCATC 6 cut(s) 65, 96, 179, 231, 362, 950
BcgI CGANNNNNNTGC 2 cut(s) 773, 807
BciT130I CCWGG 4 cut(s) 164, 759, 1078, 1406
BciVI GTATCC 2 cut(s) 30, 671
BcoDI GTCTC 4 cut(s) 385, 484, 1169, 1341
BfaI CTAG 3 cut(s) 260, 470, 485
BfmI CTRYAG 2 cut(s) 445, 1365
BfuI GTATCC 2 cut(s) 30, 671
BisI GCNGC 3 cut(s) 147, 298, 1278
BlnI CCTAGG 1 cut(s) 484
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 3 cut(s) 148, 299, 1279
Bme18I GGWCC 4 cut(s) 251, 283, 361, 878
BmeT110I CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
BmgT120I GGNCC 5 cut(s) 217, 251, 283, 361, 878
BmiI GGNNCC 8 cut(s) 252, 284, 362, 697, 706, 776, 849, 879
BmsI GCATC 6 cut(s) 115, 583, 846, 987, 1080, 1111
BpiI GAAGAC 1 cut(s) 543
BplI GAGNNNNNCTC 2 cut(s) 1208, 1240
BpmI CTGGAG 3 cut(s) 1229, 1292, 1427
Bpu1102I GCTNAGC 1 cut(s) 479
Bpu14I TTCGAA 1 cut(s) 914
BpuEI CTTGAG 3 cut(s) 50, 101, 680
BsaAI YACGTR 1 cut(s) 1114
BsaBI GATNNNNATC 1 cut(s) 612
BsaHI GRCGYC 1 cut(s) 1379
BsaWI WCCGGW 4 cut(s) 40, 456, 681, 880
Bsc4I CCNNNNNNNGG 9 cut(s) 98, 102, 103, 140, 527, 793, 1030, 1060, 1078
Bse1I ACTGG 1 cut(s) 829
Bse8I GATNNNNATC 1 cut(s) 612
BseBI CCWGG 4 cut(s) 164, 759, 1078, 1406
BseGI GGATG 7 cut(s) 76, 107, 130, 453, 1138, 1156, 1333
BseJI GATNNNNATC 1 cut(s) 612
BseLI CCNNNNNNNGG 9 cut(s) 98, 102, 103, 140, 527, 793, 1030, 1060, 1078
BseMII CTCAG 3 cut(s) 354, 947, 1308
BseNI ACTGG 1 cut(s) 829
BseSI GKGCMC 2 cut(s) 993, 1099
BseXI GCAGC 2 cut(s) 158, 1289
BseYI CCCAGC 1 cut(s) 734
BshFI GGCC 3 cut(s) 61, 218, 353
BshNI GGYRCC 2 cut(s) 695, 774
BsiHKAI GWGCWC 2 cut(s) 993, 1302
BsiHKCI CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
BslFI GGGAC 7 cut(s) 210, 296, 318, 374, 891, 914, 1235
BslI CCNNNNNNNGG 9 cut(s) 98, 102, 103, 140, 527, 793, 1030, 1060, 1078
BsmAI GTCTC 4 cut(s) 385, 484, 1169, 1341
BsmFI GGGAC 7 cut(s) 210, 296, 318, 374, 891, 914, 1235
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 3 cut(s) 61, 218, 353
BsoBI CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
Bsp119I TTCGAA 1 cut(s) 914
Bsp1286I GDGCHC 5 cut(s) 316, 707, 993, 1099, 1302
Bsp143I GATC 2 cut(s) 613, 1063
Bsp1720I GCTNAGC 1 cut(s) 479
BspACI CCGC 5 cut(s) 122, 298, 787, 1093, 1219
BspANI GGCC 3 cut(s) 61, 218, 353
BspCNI CTCAG 3 cut(s) 353, 948, 1309
BspLI GGNNCC 8 cut(s) 252, 284, 362, 697, 706, 776, 849, 879
BspPI GGATC 1 cut(s) 1071
BspT104I TTCGAA 1 cut(s) 914
BspT107I GGYRCC 2 cut(s) 695, 774
BsrBI CCGCTC 1 cut(s) 1219
BsrI ACTGG 1 cut(s) 829
BssMI GATC 2 cut(s) 613, 1063
BssNI GRCGYC 1 cut(s) 1379
BssT1I CCWWGG 3 cut(s) 484, 583, 893
Bst2UI CCWGG 4 cut(s) 164, 759, 1078, 1406
Bst4CI ACNGT 4 cut(s) 214, 271, 287, 378
Bst6I CTCTTC 2 cut(s) 506, 680
BstACI GRCGYC 1 cut(s) 1379
BstAPI GCANNNNNTGC 1 cut(s) 997
BstBAI YACGTR 1 cut(s) 1114
BstBI TTCGAA 1 cut(s) 914
BstC8I GCNNGC 6 cut(s) 207, 641, 1002, 1095, 1126, 1205
BstDEI CTNAG 6 cut(s) 56, 340, 479, 933, 956, 1317
BstENI CCTNNNNNAGG 1 cut(s) 138
BstF5I GGATG 7 cut(s) 76, 107, 130, 453, 1138, 1156, 1333
BstKTI GATC 2 cut(s) 616, 1066
BstMAI GTCTC 4 cut(s) 385, 484, 1169, 1341
BstMBI GATC 2 cut(s) 613, 1063
BstMWI GCNNNNNNNGC 6 cut(s) 215, 702, 731, 781, 856, 997
BstNI CCWGG 4 cut(s) 164, 759, 1078, 1406
BstNSI RCATGY 2 cut(s) 574, 1111
BstSFI CTRYAG 2 cut(s) 445, 1365
BstSLI GKGCMC 2 cut(s) 993, 1099
BstV1I GCAGC 2 cut(s) 158, 1289
BstV2I GAAGAC 1 cut(s) 543
BsuI GTATCC 2 cut(s) 30, 671
BsuRI GGCC 3 cut(s) 61, 218, 353
BtsCI GGATG 7 cut(s) 76, 107, 130, 453, 1138, 1156, 1333
BtsI GCAGTG 1 cut(s) 247
BtsIMutI CAGTG 4 cut(s) 247, 374, 822, 972
Cac8I GCNNGC 6 cut(s) 207, 641, 1002, 1095, 1126, 1205
Cfr13I GGNCC 5 cut(s) 217, 251, 283, 361, 878
Cfr9I CCCGGG 4 cut(s) 96, 301, 405, 700
CseI GACGC 1 cut(s) 876
CsiI ACCWGGT 1 cut(s) 757
Csp6I GTAC 7 cut(s) 245, 460, 467, 560, 964, 1034, 1111
CviAII CATG 5 cut(s) 571, 1108, 1190, 1383, 1444
CviQI GTAC 7 cut(s) 245, 460, 467, 560, 964, 1034, 1111
DdeI CTNAG 6 cut(s) 56, 340, 479, 933, 956, 1317
DpnI GATC 2 cut(s) 615, 1065
DpnII GATC 2 cut(s) 613, 1063
Eam1104I CTCTTC 2 cut(s) 506, 680
EarI CTCTTC 2 cut(s) 506, 680
Ecl136II GAGCTC 1 cut(s) 1300
Eco130I CCWWGG 3 cut(s) 484, 583, 893
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 3 cut(s) 316, 707, 1302
Eco47I GGWCC 4 cut(s) 251, 283, 361, 878
Eco53kI GAGCTC 1 cut(s) 1300
Eco57I CTGAAG 2 cut(s) 47, 1250
Eco88I CYCGRG 5 cut(s) 96, 301, 405, 700, 1344
EcoICRI GAGCTC 1 cut(s) 1300
EcoNI CCTNNNNNAGG 1 cut(s) 138
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 4 cut(s) 162, 757, 1076, 1404
EcoT14I CCWWGG 3 cut(s) 484, 583, 893
EcoT38I GRGCYC 3 cut(s) 316, 707, 1302
ErhI CCWWGG 3 cut(s) 484, 583, 893
FaeI CATG 5 cut(s) 574, 1111, 1193, 1386, 1447
FaqI GGGAC 7 cut(s) 210, 296, 318, 374, 891, 914, 1235
FatI CATG 5 cut(s) 570, 1107, 1189, 1382, 1443
FauI CCCGC 2 cut(s) 1086, 1212
Fnu4HI GCNGC 3 cut(s) 147, 298, 1278
FokI GGATG 7 cut(s) 83, 114, 137, 440, 1145, 1163, 1340
FriOI GRGCYC 3 cut(s) 316, 707, 1302
Fsp4HI GCNGC 3 cut(s) 147, 298, 1278
FspBI CTAG 3 cut(s) 260, 470, 485
GluI GCNGC 3 cut(s) 147, 298, 1278
GsaI CCCAGC 1 cut(s) 738
GsuI CTGGAG 3 cut(s) 1229, 1292, 1427
HaeIII GGCC 3 cut(s) 61, 218, 353
HgaI GACGC 1 cut(s) 876
Hin1I GRCGYC 1 cut(s) 1379
Hin1II CATG 5 cut(s) 574, 1111, 1193, 1386, 1447
HincII GTYRAC 1 cut(s) 1263
HindII GTYRAC 1 cut(s) 1263
HinfI GANTC 8 cut(s) 88, 492, 919, 1082, 1223, 1244, 1349, 1370
HphI GGTGA 4 cut(s) 86, 314, 773, 1319
Hpy166II GTNNAC 3 cut(s) 245, 991, 1263
Hpy188I TCNGA 4 cut(s) 343, 382, 1318, 1354
Hpy188III TCNNGA 3 cut(s) 16, 946, 1344
Hpy8I GTNNAC 3 cut(s) 245, 991, 1263
Hpy99I CGWCG 6 cut(s) 625, 674, 677, 892, 1071, 1381
HpyAV CCTTC 8 cut(s) 619, 1006, 1141, 1192, 1207, 1298, 1351, 1381
HpyCH4III ACNGT 4 cut(s) 214, 271, 287, 378
HpyCH4IV ACGT 4 cut(s) 620, 813, 1113, 1379
HpyCH4V TGCA 3 cut(s) 601, 859, 991
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 702, 731, 781, 856, 997
HpyF3I CTNAG 6 cut(s) 56, 340, 479, 933, 956, 1317
HpySE526I ACGT 4 cut(s) 620, 813, 1113, 1379
Hsp92I GRCGYC 1 cut(s) 1379
Hsp92II CATG 5 cut(s) 574, 1111, 1193, 1386, 1447
Kzo9I GATC 2 cut(s) 613, 1063
LmnI GCTCC 5 cut(s) 446, 710, 738, 847, 1216
Lsp1109I GCAGC 2 cut(s) 158, 1289
LweI GCATC 6 cut(s) 115, 583, 846, 987, 1080, 1111
MabI ACCWGGT 1 cut(s) 757
MaeI CTAG 3 cut(s) 260, 470, 485
MaeII ACGT 4 cut(s) 620, 813, 1113, 1379
MaeIII GTNAC 3 cut(s) 320, 814, 970
MalI GATC 2 cut(s) 615, 1065
MbiI CCGCTC 1 cut(s) 1219
MboI GATC 2 cut(s) 613, 1063
MhlI GDGCHC 5 cut(s) 316, 707, 993, 1099, 1302
MluCI AATT 3 cut(s) 172, 231, 950
MlyI GAGTC 5 cut(s) 486, 1217, 1253, 1343, 1379
MseI TTAA 3 cut(s) 837, 1250, 1335
MslI CAYNNNNRTG 5 cut(s) 17, 327, 575, 606, 1112
MspA1I CMGCKG 2 cut(s) 149, 734
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 4 cut(s) 164, 759, 1078, 1406
MwoI GCNNNNNNNGC 6 cut(s) 215, 702, 731, 781, 856, 997
NdeII GATC 2 cut(s) 613, 1063
NlaIII CATG 5 cut(s) 574, 1111, 1193, 1386, 1447
NlaIV GGNNCC 8 cut(s) 252, 284, 362, 697, 706, 776, 849, 879
NmuCI GTSAC 2 cut(s) 320, 970
NspI RCATGY 2 cut(s) 574, 1111
NspV TTCGAA 1 cut(s) 914
PceI AGGCCT 1 cut(s) 61
PciI ACATGT 1 cut(s) 1107
PcsI WCGNNNNNNNCGW 2 cut(s) 316, 984
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 3 cut(s) 88, 919, 1082
PfoI TCCNGGA 1 cut(s) 874
PkrI GCNGC 3 cut(s) 148, 299, 1279
PleI GAGTC 5 cut(s) 486, 1217, 1252, 1343, 1378
PpsI GAGTC 5 cut(s) 486, 1217, 1252, 1343, 1378
Ppu21I YACGTR 1 cut(s) 1114
PpuMI RGGWCCY 1 cut(s) 251
PscI ACATGT 1 cut(s) 1107
Psp124BI GAGCTC 1 cut(s) 1302
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 4 cut(s) 162, 757, 1076, 1404
PspFI CCCAGC 1 cut(s) 734
PspGI CCWGG 4 cut(s) 162, 757, 1076, 1404
PspN4I GGNNCC 8 cut(s) 252, 284, 362, 697, 706, 776, 849, 879
PspPI GGNCC 5 cut(s) 217, 251, 283, 361, 878
PspPPI RGGWCCY 1 cut(s) 251
PvuII CAGCTG 2 cut(s) 149, 734
RsaI GTAC 7 cut(s) 246, 461, 468, 561, 965, 1035, 1112
RsaNI GTAC 7 cut(s) 245, 460, 467, 560, 964, 1034, 1111
RseI CAYNNNNRTG 5 cut(s) 17, 327, 575, 606, 1112
SacI GAGCTC 1 cut(s) 1302
SaqAI TTAA 3 cut(s) 837, 1250, 1335
SatI GCNGC 3 cut(s) 147, 298, 1278
Sau3AI GATC 2 cut(s) 613, 1063
Sau96I GGNCC 5 cut(s) 217, 251, 283, 361, 878
SchI GAGTC 5 cut(s) 486, 1217, 1253, 1343, 1379
SduI GDGCHC 5 cut(s) 316, 707, 993, 1099, 1302
SexAI ACCWGGT 1 cut(s) 757
SfaNI GCATC 6 cut(s) 115, 583, 846, 987, 1080, 1111
SfcI CTRYAG 2 cut(s) 445, 1365
SfuI TTCGAA 1 cut(s) 914
SinI GGWCC 4 cut(s) 251, 283, 361, 878
SmaI CCCGGG 4 cut(s) 98, 303, 407, 702
SmiMI CAYNNNNRTG 5 cut(s) 17, 327, 575, 606, 1112
SmlI CTYRAG 3 cut(s) 65, 80, 659
SmoI CTYRAG 3 cut(s) 65, 80, 659
Sse9I AATT 3 cut(s) 172, 231, 950
SseBI AGGCCT 1 cut(s) 61
SsiI CCGC 5 cut(s) 122, 298, 787, 1093, 1219
SspMI CTAG 3 cut(s) 260, 470, 485
SstI GAGCTC 1 cut(s) 1302
StuI AGGCCT 1 cut(s) 61
StyI CCWWGG 3 cut(s) 484, 583, 893
TaaI ACNGT 4 cut(s) 214, 271, 287, 378
TaiI ACGT 4 cut(s) 623, 816, 1116, 1382
TaqI TCGA 6 cut(s) 236, 612, 623, 914, 995, 1302
TasI AATT 3 cut(s) 172, 231, 950
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 3 cut(s) 88, 919, 1082
Tru1I TTAA 3 cut(s) 837, 1250, 1335
Tru9I TTAA 3 cut(s) 837, 1250, 1335
TscAI CASTG 4 cut(s) 247, 381, 829, 979
TseFI GTSAC 2 cut(s) 320, 970
TseI GCWGC 2 cut(s) 146, 1277
Tsp45I GTSAC 2 cut(s) 320, 970
TspDTI ATGAA 5 cut(s) 17, 442, 563, 663, 1178
TspGWI ACGGA 3 cut(s) 412, 454, 690
TspMI CCCGGG 4 cut(s) 96, 301, 405, 700
TspRI CASTG 4 cut(s) 247, 381, 829, 979
VneI GTGCAC 1 cut(s) 989
VpaK11BI GGWCC 4 cut(s) 251, 283, 361, 878
XagI CCTNNNNNAGG 1 cut(s) 138
XapI RAATTY 1 cut(s) 172
XceI RCATGY 2 cut(s) 574, 1111
XmaI CCCGGG 4 cut(s) 96, 301, 405, 700
XmaJI CCTAGG 1 cut(s) 484
XspI CTAG 3 cut(s) 260, 470, 485
ZraI GACGTC 1 cut(s) 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.