Rmu_sc0002451.1_g000063

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002451.1
OG0000087
Physical Location & Seq
Reverse (-)
247004 .. 249002
1999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002451.1_g000063.1.cds

Sequence Viewer

Length: 1380 bp
atgctggtagatgggacgacctgtgatgaacagggcaggagcatgaaaatgaaagagataacctcagtgaggctgaagtggggaatacctgaccagctacaccaggggttgtccctgccgttaccgaagccggttcagtacctgctaaggatgcttaacctgtccccaggtcaactaaccccgaatgcgtggcgacagctcctgagtatgttggcaatgtgggacctgtgcgaacagggttggccaactataaatgaattccgagcagtgtaccgggtggcatactataagaaatacggaggaaccatgacctttaacgcttgggactatgagccactcgttaccgatctacccacgtcgcaaagcaagaagtggaagaacaagatgtttcttgctggggttaaagtgccgaagaagagacccagaaaaggcaaggaagaagataagatgaatgatctgaagctgatggacaggttgctaaaccaaggagaggaggcattgaagatcgacatggacctggggggcaggacaaccaggacttctattgaggacattctactggagatacctaacgagaggtatggtgaaccggatcccaatgcccaaatagagaagcgagaaggtctcgttagggccgagactgtagtagagattatgggcttagagaagtccaaagggactggggggtcccaggtatctctgtcgagcgggtcccttgatattgcgggagtgctactcccaggggagaaaaggaaaagaattcatcggcaccgtcattgtagtggtgacaacgttgaggttacctataccgggcaggacgtgagggcagaggtgaagaaagccaaaaaggatcaccagggccctctagagtccacacaatccctggggttgctgtctccggcggtgcctgtcatccccaaaaaaccgatcaagcagctgctttccgagtacggtgtggcagacgagaggttcgtgagagcaatgctcggggatctgaaggacatagacctagaccgcatctgggcccaggataatactccacaagagaataggaagctggcgagggagtcaatgatgcagaagagagttccagagttggaaggaatggttgggaagctgaagaaagagctggaaccgcttcgggatgctgaggagaaggctaatagctggagagccaaggcagagttcttggagggtcgggttcccgaagagcgactcgaagccatcgaggagttcaaggctttgagtgagcttgtggagatgctgctgagcgctcaagacaaagcaatcatcctgaagtaccgtgagtgggttgcagccgggtacatggatgaagccaagttcaagaaaggcgcccttgagaagaagaggaaactgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

459

Amino Acids

52.27

Weight (kDa)

9.02

Isoelectric Point (pI)

36.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 685
Acc36I ACCTGC 1 cut(s) 150
AccB1I GGYRCC 3 cut(s) 768, 904, 1352
AccBSI CCGCTC 1 cut(s) 708
AciI CCGC 5 cut(s) 708, 725, 902, 1015, 1136
AclI AACGTT 1 cut(s) 792
AclWI GGATC 4 cut(s) 587, 600, 858, 999
AcoI YGGCCR 1 cut(s) 242
AcsI RAATTY 2 cut(s) 257, 759
AcuI CTGAAG 5 cut(s) 95, 479, 1016, 1139, 1316
AcyI GRCGYC 1 cut(s) 1353
AfaI GTAC 5 cut(s) 140, 272, 950, 1301, 1325
AfeI AGCGCT 1 cut(s) 1273
AfiI CCNNNNNNNGG 6 cut(s) 69, 428, 490, 810, 1021, 1309
AgsI TTSAA 3 cut(s) 502, 1237, 1345
AjiI CACGTC 2 cut(s) 357, 820
AjnI CCWGG 9 cut(s) 102, 166, 516, 533, 690, 739, 855, 882, 1026
AjuI GAANNNNNNNTTGG 4 cut(s) 1092, 1124, 1169, 1201
AluBI AGCT 9 cut(s) 97, 199, 463, 937, 1057, 1117, 1129, 1167, 1252
AluI AGCT 9 cut(s) 97, 199, 463, 937, 1057, 1117, 1129, 1167, 1252
Alw26I GTCTC 4 cut(s) 412, 629, 632, 900
AlwI GGATC 4 cut(s) 587, 600, 858, 999
AlwNI CAGNNNCTG 2 cut(s) 142, 202
Ama87I CYCGRG 1 cut(s) 986
Aor51HI AGCGCT 1 cut(s) 1273
AoxI GGCC 4 cut(s) 242, 633, 859, 1023
ApaI GGGCCC 2 cut(s) 863, 1027
ApeKI GCWGC 4 cut(s) 934, 937, 1264, 1316
ApoI RAATTY 2 cut(s) 257, 759
ArsI GACNNNNNNTTYG 2 cut(s) 953, 985
Asp700I GAANNNNTTC 1 cut(s) 1137
AspLEI GCGC 2 cut(s) 1274, 1355
AspS9I GGNCC 9 cut(s) 223, 514, 633, 687, 711, 859, 860, 1023, 1024
AsuC2I CCSGG 3 cut(s) 275, 811, 1321
AsuHPI GGTGA 4 cut(s) 596, 797, 844, 845
AvaI CYCGRG 1 cut(s) 986
AvaII GGWCC 4 cut(s) 223, 514, 687, 711
BaeGI GKGCMC 2 cut(s) 863, 1027
BalI TGGCCA 1 cut(s) 244
BamHI GGATCC 1 cut(s) 592
BanI GGYRCC 3 cut(s) 768, 904, 1352
BanII GRGCYC 2 cut(s) 863, 1027
BbvCI CCTCAGC 1 cut(s) 1149
BbvI GCAGC 4 cut(s) 924, 946, 1251, 1328
BccI CCATC 3 cut(s) 5, 460, 1232
BceAI ACGGC 1 cut(s) 103
BciT130I CCWGG 9 cut(s) 104, 168, 518, 535, 692, 741, 857, 884, 1028
BcnI CCSGG 3 cut(s) 275, 811, 1321
BcoDI GTCTC 4 cut(s) 412, 629, 632, 900
BfaI CTAG 2 cut(s) 866, 1010
BfmI CTRYAG 2 cut(s) 642, 1376
BfoI RGCGCY 2 cut(s) 1275, 1356
BfuAI ACCTGC 1 cut(s) 150
BisI GCNGC 4 cut(s) 935, 938, 1265, 1317
BlpI GCTNAGC 1 cut(s) 1268
BlsI GCNGC 4 cut(s) 936, 939, 1266, 1318
Bme18I GGWCC 4 cut(s) 223, 514, 687, 711
BmeT110I CYCGRG 1 cut(s) 986
BmgBI CACGTC 2 cut(s) 357, 820
BmgT120I GGNCC 9 cut(s) 223, 514, 633, 687, 711, 859, 860, 1023, 1024
BmrI ACTGGG 1 cut(s) 690
BmsI GCATC 5 cut(s) 141, 1026, 1065, 1135, 1251
BmuI ACTGGG 1 cut(s) 690
BplI GAGNNNNNCTC 8 cut(s) 47, 79, 609, 641, 720, 752, 969, 1001
BpmI CTGGAG 2 cut(s) 581, 1189
Bpu10I CCTNAGC 2 cut(s) 146, 1149
Bpu1102I GCTNAGC 1 cut(s) 1268
BpuEI CTTGAG 2 cut(s) 1260, 1379
BpuMI CCSGG 3 cut(s) 275, 811, 1321
BsaHI GRCGYC 1 cut(s) 1353
BsaI GGTCTC 2 cut(s) 412, 629
BsaWI WCCGGW 1 cut(s) 589
Bsc4I CCNNNNNNNGG 6 cut(s) 69, 428, 490, 810, 1021, 1309
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 2 cut(s) 564, 685
Bse3DI GCAATG 2 cut(s) 222, 987
BseBI CCWGG 9 cut(s) 104, 168, 518, 535, 692, 741, 857, 884, 1028
BseGI GGATG 5 cut(s) 156, 912, 1150, 1290, 1336
BseLI CCNNNNNNNGG 6 cut(s) 69, 428, 490, 810, 1021, 1309
BseMI GCAATG 2 cut(s) 222, 987
BseMII CTCAG 4 cut(s) 78, 194, 1140, 1259
BseNI ACTGG 2 cut(s) 564, 685
BseRI GAGGAG 3 cut(s) 506, 1166, 1244
BseSI GKGCMC 2 cut(s) 863, 1027
BseXI GCAGC 4 cut(s) 924, 946, 1251, 1328
BseYI CCCAGC 1 cut(s) 395
BshFI GGCC 4 cut(s) 244, 635, 861, 1025
BshNI GGYRCC 3 cut(s) 768, 904, 1352
BsiHKCI CYCGRG 1 cut(s) 986
BsiSI CCGG 6 cut(s) 131, 274, 590, 810, 899, 1320
BslFI GGGAC 8 cut(s) 28, 97, 148, 236, 338, 673, 691, 697
BslI CCNNNNNNNGG 6 cut(s) 69, 428, 490, 810, 1021, 1309
BsmAI GTCTC 4 cut(s) 412, 629, 632, 900
BsmFI GGGAC 8 cut(s) 28, 97, 148, 236, 338, 673, 691, 697
BsmI GAATGC 1 cut(s) 190
BsnI GGCC 4 cut(s) 244, 635, 861, 1025
Bso31I GGTCTC 2 cut(s) 412, 629
BsoBI CYCGRG 1 cut(s) 986
Bsp120I GGGCCC 2 cut(s) 859, 1023
Bsp1286I GDGCHC 2 cut(s) 863, 1027
Bsp143I GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
Bsp1720I GCTNAGC 1 cut(s) 1268
BspACI CCGC 5 cut(s) 708, 725, 902, 1015, 1136
BspANI GGCC 4 cut(s) 244, 635, 861, 1025
BspCNI CTCAG 4 cut(s) 77, 195, 1141, 1260
BspMI ACCTGC 1 cut(s) 150
BspPI GGATC 4 cut(s) 587, 600, 858, 999
BspQI GCTCTTC 1 cut(s) 1203
BspT107I GGYRCC 3 cut(s) 768, 904, 1352
BspTNI GGTCTC 2 cut(s) 412, 629
BsrBI CCGCTC 1 cut(s) 708
BsrDI GCAATG 2 cut(s) 222, 987
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 2 cut(s) 564, 685
BssAI RCCGGY 1 cut(s) 130
BssMI GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
BssNI GRCGYC 1 cut(s) 1353
BssT1I CCWWGG 2 cut(s) 484, 1176
Bst2UI CCWGG 9 cut(s) 104, 168, 518, 535, 692, 741, 857, 884, 1028
Bst4CI ACNGT 5 cut(s) 643, 773, 953, 1304, 1377
Bst6I CTCTTC 4 cut(s) 410, 1076, 1203, 1361
BstACI GRCGYC 1 cut(s) 1353
BstC8I GCNNGC 1 cut(s) 1059
BstDEI CTNAG 6 cut(s) 64, 146, 203, 661, 1149, 1268
BstEII GGTNACC 1 cut(s) 799
BstENI CCTNNNNNAGG 1 cut(s) 67
BstF5I GGATG 5 cut(s) 156, 912, 1150, 1290, 1336
BstH2I RGCGCY 2 cut(s) 1275, 1356
BstHHI GCGC 2 cut(s) 1274, 1355
BstKTI GATC 7 cut(s) 349, 457, 507, 595, 853, 930, 994
BstMAI GTCTC 4 cut(s) 412, 629, 632, 900
BstMBI GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
BstMWI GCNNNNNNNGC 2 cut(s) 151, 1135
BstNI CCWGG 9 cut(s) 104, 168, 518, 535, 692, 741, 857, 884, 1028
BstPI GGTNACC 1 cut(s) 799
BstSFI CTRYAG 2 cut(s) 642, 1376
BstSLI GKGCMC 2 cut(s) 863, 1027
BstV1I GCAGC 4 cut(s) 924, 946, 1251, 1328
BstX2I RGATCY 2 cut(s) 592, 991
BstYI RGATCY 2 cut(s) 592, 991
BsuRI GGCC 4 cut(s) 244, 635, 861, 1025
BtrI CACGTC 2 cut(s) 357, 820
BtsCI GGATG 5 cut(s) 156, 912, 1150, 1290, 1336
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 2 cut(s) 72, 273
BveI ACCTGC 1 cut(s) 150
Cac8I GCNNGC 1 cut(s) 1059
CaiI CAGNNNCTG 2 cut(s) 142, 202
CfoI GCGC 2 cut(s) 1274, 1355
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 9 cut(s) 223, 514, 633, 687, 711, 859, 860, 1023, 1024
Csp6I GTAC 5 cut(s) 139, 271, 949, 1300, 1324
CviAII CATG 4 cut(s) 43, 307, 511, 1327
CviQI GTAC 5 cut(s) 139, 271, 949, 1300, 1324
DdeI CTNAG 6 cut(s) 64, 146, 203, 661, 1149, 1268
DinI GGCGCC 1 cut(s) 1354
DpnI GATC 7 cut(s) 348, 456, 506, 594, 852, 929, 993
DpnII GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
DrdI GACNNNNNNGTC 1 cut(s) 685
DseDI GACNNNNNNGTC 1 cut(s) 685
EaeI YGGCCR 1 cut(s) 242
Eam1104I CTCTTC 4 cut(s) 410, 1076, 1203, 1361
EarI CTCTTC 4 cut(s) 410, 1076, 1203, 1361
Eco130I CCWWGG 2 cut(s) 484, 1176
Eco24I GRGCYC 2 cut(s) 863, 1027
Eco31I GGTCTC 2 cut(s) 412, 629
Eco47I GGWCC 4 cut(s) 223, 514, 687, 711
Eco47III AGCGCT 1 cut(s) 1273
Eco57I CTGAAG 5 cut(s) 95, 479, 1016, 1139, 1316
Eco88I CYCGRG 1 cut(s) 986
Eco91I GGTNACC 1 cut(s) 799
EcoNI CCTNNNNNAGG 1 cut(s) 67
EcoO109I RGGNCCY 5 cut(s) 223, 687, 711, 859, 860
EcoO65I GGTNACC 1 cut(s) 799
EcoRI GAATTC 2 cut(s) 257, 759
EcoRII CCWGG 9 cut(s) 102, 166, 516, 533, 690, 739, 855, 882, 1026
EcoT14I CCWWGG 2 cut(s) 484, 1176
EcoT38I GRGCYC 2 cut(s) 863, 1027
EgeI GGCGCC 1 cut(s) 1354
EheI GGCGCC 1 cut(s) 1354
ErhI CCWWGG 2 cut(s) 484, 1176
FaeI CATG 4 cut(s) 46, 310, 514, 1330
FalI AAGNNNNNCTT 2 cut(s) 1341, 1373
FaqI GGGAC 8 cut(s) 28, 97, 148, 236, 338, 673, 691, 697
FatI CATG 4 cut(s) 42, 306, 510, 1326
FauI CCCGC 2 cut(s) 701, 718
Fnu4HI GCNGC 4 cut(s) 935, 938, 1265, 1317
FokI GGATG 5 cut(s) 163, 899, 1157, 1277, 1343
FriOI GRGCYC 2 cut(s) 863, 1027
Fsp4HI GCNGC 4 cut(s) 935, 938, 1265, 1317
FspBI CTAG 2 cut(s) 866, 1010
GlaI GCGC 2 cut(s) 1273, 1354
GluI GCNGC 4 cut(s) 935, 938, 1265, 1317
GsaI CCCAGC 1 cut(s) 399
GsuI CTGGAG 2 cut(s) 581, 1189
HaeII RGCGCY 2 cut(s) 1275, 1356
HaeIII GGCC 4 cut(s) 244, 635, 861, 1025
HapII CCGG 6 cut(s) 131, 274, 590, 810, 899, 1320
HhaI GCGC 2 cut(s) 1274, 1355
Hin1I GRCGYC 1 cut(s) 1353
Hin1II CATG 4 cut(s) 46, 310, 514, 1330
Hin6I GCGC 2 cut(s) 1272, 1353
HinP1I GCGC 2 cut(s) 1272, 1353
HincII GTYRAC 1 cut(s) 173
HindII GTYRAC 1 cut(s) 173
HinfI GANTC 3 cut(s) 869, 1067, 1215
HpaII CCGG 6 cut(s) 131, 274, 590, 810, 899, 1320
HphI GGTGA 4 cut(s) 596, 797, 844, 845
Hpy166II GTNNAC 4 cut(s) 173, 271, 587, 873
Hpy188I TCNGA 4 cut(s) 263, 459, 946, 996
Hpy188III TCNNGA 9 cut(s) 202, 866, 973, 1091, 1142, 1205, 1277, 1294, 1345
Hpy8I GTNNAC 4 cut(s) 173, 271, 587, 873
Hpy99I CGWCG 1 cut(s) 361
HpyAV CCTTC 4 cut(s) 614, 991, 1094, 1150
HpyCH4III ACNGT 5 cut(s) 643, 773, 953, 1304, 1377
HpyCH4IV ACGT 3 cut(s) 356, 792, 819
HpyCH4V TGCA 2 cut(s) 1078, 1316
HpyF10VI GCNNNNNNNGC 2 cut(s) 151, 1135
HpyF3I CTNAG 6 cut(s) 64, 146, 203, 661, 1149, 1268
HpySE526I ACGT 3 cut(s) 356, 792, 819
Hsp92I GRCGYC 1 cut(s) 1353
Hsp92II CATG 4 cut(s) 46, 310, 514, 1330
HspAI GCGC 2 cut(s) 1272, 1353
KasI GGCGCC 1 cut(s) 1352
KflI GGGWCCC 2 cut(s) 687, 711
Kzo9I GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
LguI GCTCTTC 1 cut(s) 1203
LmnI GCTCC 2 cut(s) 39, 204
Lsp1109I GCAGC 4 cut(s) 924, 946, 1251, 1328
LweI GCATC 5 cut(s) 141, 1026, 1065, 1135, 1251
MaeI CTAG 2 cut(s) 866, 1010
MaeII ACGT 3 cut(s) 356, 792, 819
MaeIII GTNAC 4 cut(s) 120, 340, 785, 799
MalI GATC 7 cut(s) 348, 456, 506, 594, 852, 929, 993
MbiI CCGCTC 1 cut(s) 708
MboI GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
MflI RGATCY 2 cut(s) 592, 991
MhlI GDGCHC 2 cut(s) 863, 1027
MlsI TGGCCA 1 cut(s) 244
MluCI AATT 2 cut(s) 257, 759
MluNI TGGCCA 1 cut(s) 244
Mly113I GGCGCC 1 cut(s) 1353
MlyI GAGTC 3 cut(s) 878, 1076, 1209
MmeI TCCRAC 1 cut(s) 1077
Mox20I TGGCCA 1 cut(s) 244
MroXI GAANNNNTTC 1 cut(s) 1137
MscI TGGCCA 1 cut(s) 244
MseI TTAA 3 cut(s) 156, 315, 402
MslI CAYNNNNRTG 2 cut(s) 47, 780
Msp20I TGGCCA 1 cut(s) 244
MspA1I CMGCKG 1 cut(s) 937
MspI CCGG 6 cut(s) 131, 274, 590, 810, 899, 1320
Mva1269I GAATGC 1 cut(s) 190
MvaI CCWGG 9 cut(s) 104, 168, 518, 535, 692, 741, 857, 884, 1028
MwoI GCNNNNNNNGC 2 cut(s) 151, 1135
NarI GGCGCC 1 cut(s) 1353
NciI CCSGG 3 cut(s) 275, 811, 1321
NdeII GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
NlaIII CATG 4 cut(s) 46, 310, 514, 1330
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 1 cut(s) 785
PasI CCCWGGG 2 cut(s) 740, 883
PciSI GCTCTTC 1 cut(s) 1203
PcsI WCGNNNNNNNCGW 3 cut(s) 633, 969, 1224
PctI GAATGC 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 1137
PkrI GCNGC 4 cut(s) 936, 939, 1266, 1318
PleI GAGTC 3 cut(s) 877, 1075, 1209
PluTI GGCGCC 1 cut(s) 1356
PpsI GAGTC 3 cut(s) 877, 1075, 1209
PpuMI RGGWCCY 3 cut(s) 223, 687, 711
Psp1406I AACGTT 1 cut(s) 792
Psp5II RGGWCCY 3 cut(s) 223, 687, 711
Psp6I CCWGG 9 cut(s) 102, 166, 516, 533, 690, 739, 855, 882, 1026
PspEI GGTNACC 1 cut(s) 799
PspFI CCCAGC 1 cut(s) 395
PspGI CCWGG 9 cut(s) 102, 166, 516, 533, 690, 739, 855, 882, 1026
PspOMI GGGCCC 2 cut(s) 859, 1023
PspPI GGNCC 9 cut(s) 223, 514, 633, 687, 711, 859, 860, 1023, 1024
PspPPI RGGWCCY 3 cut(s) 223, 687, 711
PstNI CAGNNNCTG 2 cut(s) 142, 202
PsuI RGATCY 2 cut(s) 592, 991
PvuII CAGCTG 1 cut(s) 937
RsaI GTAC 5 cut(s) 140, 272, 950, 1301, 1325
RsaNI GTAC 5 cut(s) 139, 271, 949, 1300, 1324
RseI CAYNNNNRTG 2 cut(s) 47, 780
SapI GCTCTTC 1 cut(s) 1203
SaqAI TTAA 3 cut(s) 156, 315, 402
SatI GCNGC 4 cut(s) 935, 938, 1265, 1317
Sau3AI GATC 7 cut(s) 346, 454, 504, 592, 850, 927, 991
Sau96I GGNCC 9 cut(s) 223, 514, 633, 687, 711, 859, 860, 1023, 1024
SchI GAGTC 3 cut(s) 878, 1076, 1209
SduI GDGCHC 2 cut(s) 863, 1027
SfaNI GCATC 5 cut(s) 141, 1026, 1065, 1135, 1251
SfcI CTRYAG 2 cut(s) 642, 1376
SfoI GGCGCC 1 cut(s) 1354
SinI GGWCC 4 cut(s) 223, 514, 687, 711
SmiMI CAYNNNNRTG 2 cut(s) 47, 780
SmlI CTYRAG 2 cut(s) 1275, 1358
SmoI CTYRAG 2 cut(s) 1275, 1358
Sse9I AATT 2 cut(s) 257, 759
SsiI CCGC 5 cut(s) 708, 725, 902, 1015, 1136
SspDI GGCGCC 1 cut(s) 1352
SspMI CTAG 2 cut(s) 866, 1010
StyI CCWWGG 2 cut(s) 484, 1176
TaaI ACNGT 5 cut(s) 643, 773, 953, 1304, 1377
TaiI ACGT 3 cut(s) 359, 795, 822
TaqI TCGA 4 cut(s) 507, 704, 1218, 1227
TasI AATT 2 cut(s) 257, 759
Tru1I TTAA 3 cut(s) 156, 315, 402
Tru9I TTAA 3 cut(s) 156, 315, 402
TscAI CASTG 2 cut(s) 72, 273
TseFI GTSAC 1 cut(s) 785
TseI GCWGC 4 cut(s) 934, 937, 1264, 1316
Tsp45I GTSAC 1 cut(s) 785
TspDTI ATGAA 7 cut(s) 42, 59, 65, 270, 464, 752, 1347
TspGWI ACGGA 1 cut(s) 312
TspRI CASTG 2 cut(s) 72, 273
VpaK11BI GGWCC 4 cut(s) 223, 514, 687, 711
XagI CCTNNNNNAGG 1 cut(s) 67
XapI RAATTY 2 cut(s) 257, 759
XbaI TCTAGA 1 cut(s) 865
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XmnI GAANNNNTTC 1 cut(s) 1137
XspI CTAG 2 cut(s) 866, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.