Rmu_sc0008232.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008232.1
OG0000087
Physical Location & Seq
Forward (+)
38218 .. 39408
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008232.1_g000011.1.cds

Sequence Viewer

Length: 1128 bp
atggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggttgaaaggcacgagtcggtctatcgaagagaccctgttggagataaccgatgagggatatggtgaacctgatcccgacgcccctgtgacccacgctgctcagccctccatggccgatgtcattacgatagctgacaccggggtgggaaaagtaccggccccagtgcccatttcctctcgttccactgggagcgatgaggtgttactccccggtgagaagaagagatcccacaagcaccggcatcgaactgataaggaggtgacatacactggccgggatgtccaggctaccggtgcgaagaggcagaagaaagatcacctgggatcagggtcgtcgccctctcttggcctgttatctcccgccgttccggtaatccccaagaatcccatcaagcagctgctgaatggatacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggacattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggagtcaatgatgctggcactcttcaatgtgtacgccatcgatgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccgggcaggtgaagtatcttcatggagagaaggccaagctggagaaggagcaggactcattgagtgctgagatggccacctctaagcagcggattgcggagcttgagggtgaggtagctgaggcgcgggaggaagtcaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatcgctatgctggctgctgcccaagatatggctgtcatcataaagtttaaggagtgggtggcggccgggtacttagatgaacccaaatttaggcggggtctccaggagaagaggaagaaggagcgggaggcgacggtcaagtccggtgccggtgggtctcagagtaccgatagagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

375

Amino Acids

41.29

Weight (kDa)

5.36

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 667
AasI GACNNNNNNGTC 1 cut(s) 1081
AatII GACGTC 1 cut(s) 48
Acc36I ACCTGC 1 cut(s) 667
AccB1I GGYRCC 1 cut(s) 1088
AccB7I CCANNNNNTGG 1 cut(s) 970
AccBSI CCGCTC 1 cut(s) 1066
AccI GTMKAC 1 cut(s) 48
AccII CGCG 2 cut(s) 796, 896
AclWI GGATC 5 cut(s) 122, 276, 388, 516, 891
AcoI YGGCCR 4 cut(s) 168, 328, 744, 1005
AcsI RAATTY 1 cut(s) 1028
AcuI CTGAAG 2 cut(s) 533, 668
AcyI GRCGYC 2 cut(s) 45, 135
AfaI GTAC 5 cut(s) 210, 614, 923, 1013, 1108
AfiI CCNNNNNNNGG 8 cut(s) 401, 504, 532, 855, 895, 900, 970, 1032
AgeI ACCGGT 1 cut(s) 347
AgsI TTSAA 2 cut(s) 61, 607
AjnI CCWGG 5 cut(s) 18, 339, 375, 558, 1044
AleI CACNNNNGTG 1 cut(s) 197
AluBI AGCT 6 cut(s) 188, 454, 709, 772, 788, 940
AluI AGCT 6 cut(s) 188, 454, 709, 772, 788, 940
Alw26I GTCTC 5 cut(s) 80, 578, 856, 1046, 1104
AlwI GGATC 5 cut(s) 122, 276, 388, 516, 891
AlwNI CAGNNNCTG 2 cut(s) 457, 845
Ama87I CYCGRG 2 cut(s) 579, 816
AoxI GGCC 8 cut(s) 168, 213, 328, 403, 702, 744, 909, 1005
ApeKI GCWGC 7 cut(s) 152, 451, 454, 757, 836, 956, 959
ApoI RAATTY 1 cut(s) 1028
AsiGI ACCGGT 1 cut(s) 347
AspA2I CCTAGG 1 cut(s) 52
AspLEI GCGC 1 cut(s) 796
AspS9I GGNCC 2 cut(s) 214, 495
AsuHPI GGTGA 6 cut(s) 131, 281, 328, 365, 691, 791
AvaI CYCGRG 2 cut(s) 579, 816
AvaII GGWCC 1 cut(s) 495
AvrII CCTAGG 1 cut(s) 52
BaeGI GKGCMC 1 cut(s) 225
BalI TGGCCA 1 cut(s) 746
BanI GGYRCC 1 cut(s) 1088
BauI CACGAG 2 cut(s) 67, 905
BbvCI CCTCAGC 1 cut(s) 789
BbvI GCAGC 7 cut(s) 139, 441, 463, 769, 823, 943, 946
BccI CCATC 3 cut(s) 452, 626, 736
BceAI ACGGC 4 cut(s) 404, 555, 833, 896
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciT130I CCWGG 5 cut(s) 20, 341, 377, 560, 1046
BciVI GTATCC 1 cut(s) 458
BcoDI GTCTC 5 cut(s) 80, 578, 856, 1046, 1104
BfaI CTAG 1 cut(s) 53
BfmI CTRYAG 1 cut(s) 837
BfuAI ACCTGC 1 cut(s) 667
BfuI GTATCC 1 cut(s) 458
BisI GCNGC 8 cut(s) 153, 452, 455, 758, 837, 957, 960, 1005
BlnI CCTAGG 1 cut(s) 52
BlpI GCTNAGC 1 cut(s) 156
BlsI GCNGC 8 cut(s) 154, 453, 456, 759, 838, 958, 961, 1006
Bme18I GGWCC 1 cut(s) 495
BmeT110I CYCGRG 2 cut(s) 579, 816
BmgT120I GGNCC 2 cut(s) 214, 495
BmiI GGNNCC 2 cut(s) 216, 1090
BmrI ACTGGG 2 cut(s) 212, 252
BmsI GCATC 4 cut(s) 19, 307, 582, 613
BmuI ACTGGG 2 cut(s) 212, 252
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpmI CTGGAG 3 cut(s) 731, 899, 1028
Bpu10I CCTNAGC 1 cut(s) 789
Bpu1102I GCTNAGC 1 cut(s) 156
BpuEI CTTGAG 1 cut(s) 794
Bsa29I ATCGAT 1 cut(s) 621
BsaBI GATNNNNATC 2 cut(s) 642, 1116
BsaHI GRCGYC 2 cut(s) 45, 135
BsaI GGTCTC 3 cut(s) 80, 1046, 1104
BsaWI WCCGGW 3 cut(s) 347, 424, 1085
BsaXI ACNNNNNCTCC 2 cut(s) 911, 941
Bsc4I CCNNNNNNNGG 8 cut(s) 401, 504, 532, 855, 895, 900, 970, 1032
Bse118I RCCGGY 4 cut(s) 211, 294, 347, 1091
Bse1I ACTGG 3 cut(s) 218, 247, 331
Bse8I GATNNNNATC 2 cut(s) 642, 1116
BseBI CCWGG 5 cut(s) 20, 341, 377, 560, 1046
BseCI ATCGAT 1 cut(s) 621
BseGI GGATG 2 cut(s) 340, 940
BseJI GATNNNNATC 2 cut(s) 642, 1116
BseLI CCNNNNNNNGG 8 cut(s) 401, 504, 532, 855, 895, 900, 970, 1032
BseMII CTCAG 4 cut(s) 170, 729, 780, 1115
BseNI ACTGG 3 cut(s) 218, 247, 331
BseRI GAGGAG 2 cut(s) 668, 932
BseSI GKGCMC 1 cut(s) 225
BseX3I CGGCCG 1 cut(s) 1005
BseXI GCAGC 7 cut(s) 139, 441, 463, 769, 823, 943, 946
BsgI GTGCAG 1 cut(s) 20
Bsh1236I CGCG 2 cut(s) 796, 896
Bsh1285I CGRYCG 2 cut(s) 532, 1008
BshFI GGCC 8 cut(s) 170, 215, 330, 405, 704, 746, 911, 1007
BshNI GGYRCC 1 cut(s) 1088
BshTI ACCGGT 1 cut(s) 347
BshVI ATCGAT 1 cut(s) 621
BsiEI CGRYCG 2 cut(s) 532, 1008
BsiHKCI CYCGRG 2 cut(s) 579, 816
BslFI GGGAC 1 cut(s) 833
BslI CCNNNNNNNGG 8 cut(s) 401, 504, 532, 855, 895, 900, 970, 1032
BsmAI GTCTC 5 cut(s) 80, 578, 856, 1046, 1104
BsmBI CGTCTC 2 cut(s) 578, 856
BsmFI GGGAC 1 cut(s) 833
BsnI GGCC 8 cut(s) 170, 215, 330, 405, 704, 746, 911, 1007
Bso31I GGTCTC 3 cut(s) 80, 1046, 1104
BsoBI CYCGRG 2 cut(s) 579, 816
Bsp1286I GDGCHC 1 cut(s) 225
Bsp143I GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
Bsp1720I GCTNAGC 1 cut(s) 156
Bsp19I CCATGG 1 cut(s) 165
BspANI GGCC 8 cut(s) 170, 215, 330, 405, 704, 746, 911, 1007
BspCNI CTCAG 4 cut(s) 169, 730, 781, 1114
BspDI ATCGAT 1 cut(s) 621
BspFNI CGCG 2 cut(s) 796, 896
BspLI GGNNCC 2 cut(s) 216, 1090
BspMAI CTGCAG 1 cut(s) 841
BspMI ACCTGC 1 cut(s) 667
BspPI GGATC 5 cut(s) 122, 276, 388, 516, 891
BspT107I GGYRCC 1 cut(s) 1088
BspTNI GGTCTC 3 cut(s) 80, 1046, 1104
BsrBI CCGCTC 1 cut(s) 1066
BsrFI RCCGGY 4 cut(s) 211, 294, 347, 1091
BsrI ACTGG 3 cut(s) 218, 247, 331
BssAI RCCGGY 4 cut(s) 211, 294, 347, 1091
BssMI GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
BssNI GRCGYC 2 cut(s) 45, 135
BssSI CACGAG 2 cut(s) 67, 905
BssT1I CCWWGG 2 cut(s) 52, 165
Bst2BI CACGAG 2 cut(s) 67, 905
Bst2UI CCWGG 5 cut(s) 20, 341, 377, 560, 1046
Bst4CI ACNGT 1 cut(s) 1078
Bst6I CTCTTC 5 cut(s) 78, 272, 350, 608, 1046
BstACI GRCGYC 2 cut(s) 45, 135
BstAPI GCANNNNNTGC 1 cut(s) 845
BstC8I GCNNGC 3 cut(s) 597, 628, 954
BstDEI CTNAG 6 cut(s) 156, 738, 753, 789, 1015, 1101
BstDSI CCRYGG 3 cut(s) 165, 894, 912
BstF5I GGATG 2 cut(s) 340, 940
BstFNI CGCG 2 cut(s) 796, 896
BstHHI GCGC 1 cut(s) 796
BstKTI GATC 7 cut(s) 130, 284, 373, 383, 511, 886, 1120
BstMAI GTCTC 5 cut(s) 80, 578, 856, 1046, 1104
BstMBI GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
BstMCI CGRYCG 2 cut(s) 532, 1008
BstMWI GCNNNNNNNGC 6 cut(s) 350, 499, 623, 743, 845, 953
BstNI CCWGG 5 cut(s) 20, 341, 377, 560, 1046
BstNSI RCATGY 1 cut(s) 10
BstSFI CTRYAG 1 cut(s) 837
BstSLI GKGCMC 1 cut(s) 225
BstUI CGCG 2 cut(s) 796, 896
BstV1I GCAGC 7 cut(s) 139, 441, 463, 769, 823, 943, 946
BstX2I RGATCY 2 cut(s) 281, 508
BstYI RGATCY 2 cut(s) 281, 508
BstZI CGGCCG 1 cut(s) 1005
Bsu15I ATCGAT 1 cut(s) 621
BsuI GTATCC 1 cut(s) 458
BsuRI GGCC 8 cut(s) 170, 215, 330, 405, 704, 746, 911, 1007
BsuTUI ATCGAT 1 cut(s) 621
BtgI CCRYGG 3 cut(s) 165, 894, 912
BtgZI GCGATG 1 cut(s) 264
BtsCI GGATG 2 cut(s) 340, 940
BtsIMutI CAGTG 3 cut(s) 225, 240, 324
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 3 cut(s) 597, 628, 954
CaiI CAGNNNCTG 2 cut(s) 457, 845
CfoI GCGC 1 cut(s) 796
Cfr10I RCCGGY 4 cut(s) 211, 294, 347, 1091
Cfr13I GGNCC 2 cut(s) 214, 495
Cfr42I CCGCGG 1 cut(s) 897
Cfr9I CCCGGG 2 cut(s) 579, 816
ClaI ATCGAT 1 cut(s) 621
CseI GACGC 1 cut(s) 143
Csp6I GTAC 5 cut(s) 209, 613, 922, 1012, 1107
CspAI ACCGGT 1 cut(s) 347
CviAII CATG 5 cut(s) 7, 166, 499, 692, 855
CviQI GTAC 5 cut(s) 209, 613, 922, 1012, 1107
DdeI CTNAG 6 cut(s) 156, 738, 753, 789, 1015, 1101
DpnI GATC 7 cut(s) 129, 283, 372, 382, 510, 885, 1119
DpnII GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
DrdI GACNNNNNNGTC 1 cut(s) 1081
DseDI GACNNNNNNGTC 1 cut(s) 1081
EaeI YGGCCR 4 cut(s) 168, 328, 744, 1005
EagI CGGCCG 1 cut(s) 1005
Eam1104I CTCTTC 5 cut(s) 78, 272, 350, 608, 1046
EarI CTCTTC 5 cut(s) 78, 272, 350, 608, 1046
EclXI CGGCCG 1 cut(s) 1005
Eco130I CCWWGG 2 cut(s) 52, 165
Eco31I GGTCTC 3 cut(s) 80, 1046, 1104
Eco47I GGWCC 1 cut(s) 495
Eco52I CGGCCG 1 cut(s) 1005
Eco57I CTGAAG 2 cut(s) 533, 668
Eco88I CYCGRG 2 cut(s) 579, 816
EcoRII CCWGG 5 cut(s) 18, 339, 375, 558, 1044
EcoT14I CCWWGG 2 cut(s) 52, 165
ErhI CCWWGG 2 cut(s) 52, 165
Esp3I CGTCTC 2 cut(s) 578, 856
FaeI CATG 5 cut(s) 10, 169, 502, 695, 858
FaqI GGGAC 1 cut(s) 833
FatI CATG 5 cut(s) 6, 165, 498, 691, 854
FauI CCCGC 5 cut(s) 424, 789, 901, 1029, 1059
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 8 cut(s) 153, 452, 455, 758, 837, 957, 960, 1005
FokI GGATG 2 cut(s) 347, 947
Fsp4HI GCNGC 8 cut(s) 153, 452, 455, 758, 837, 957, 960, 1005
FspBI CTAG 1 cut(s) 53
GlaI GCGC 1 cut(s) 795
GluI GCNGC 8 cut(s) 153, 452, 455, 758, 837, 957, 960, 1005
GsuI CTGGAG 3 cut(s) 731, 899, 1028
HaeIII GGCC 8 cut(s) 170, 215, 330, 405, 704, 746, 911, 1007
HgaI GACGC 1 cut(s) 143
HhaI GCGC 1 cut(s) 796
Hin1I GRCGYC 2 cut(s) 45, 135
Hin1II CATG 5 cut(s) 10, 169, 502, 695, 858
Hin6I GCGC 1 cut(s) 794
HinP1I GCGC 1 cut(s) 794
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HinfI GANTC 8 cut(s) 70, 439, 565, 584, 725, 821, 842, 872
HphI GGTGA 6 cut(s) 131, 281, 328, 365, 691, 791
Hpy166II GTNNAC 3 cut(s) 49, 122, 613
Hpy188I TCNGA 5 cut(s) 513, 648, 826, 934, 1104
Hpy188III TCNNGA 3 cut(s) 131, 808, 878
Hpy8I GTNNAC 3 cut(s) 49, 122, 613
Hpy99I CGWCG 5 cut(s) 47, 50, 137, 394, 1078
HpyAV CCTTC 8 cut(s) 508, 643, 694, 709, 853, 859, 899, 1054
HpyCH4III ACNGT 1 cut(s) 1078
HpyCH4IV ACGT 1 cut(s) 45
HpyCH4V TGCA 2 cut(s) 37, 839
HpyF10VI GCNNNNNNNGC 6 cut(s) 350, 499, 623, 743, 845, 953
HpyF3I CTNAG 6 cut(s) 156, 738, 753, 789, 1015, 1101
HpySE526I ACGT 1 cut(s) 45
Hsp92I GRCGYC 2 cut(s) 45, 135
Hsp92II CATG 5 cut(s) 10, 169, 502, 695, 858
HspAI GCGC 1 cut(s) 794
KspI CCGCGG 1 cut(s) 897
Kzo9I GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
LmnI GCTCC 4 cut(s) 246, 718, 769, 1063
Lsp1109I GCAGC 7 cut(s) 139, 441, 463, 769, 823, 943, 946
LweI GCATC 4 cut(s) 19, 307, 582, 613
MaeI CTAG 1 cut(s) 53
MaeII ACGT 1 cut(s) 45
MaeIII GTNAC 3 cut(s) 142, 258, 316
MalI GATC 7 cut(s) 129, 283, 372, 382, 510, 885, 1119
MbiI CCGCTC 1 cut(s) 1066
MboI GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
MflI RGATCY 2 cut(s) 281, 508
MhlI GDGCHC 1 cut(s) 225
MlsI TGGCCA 1 cut(s) 746
MluCI AATT 1 cut(s) 1028
MluNI TGGCCA 1 cut(s) 746
MlyI GAGTC 6 cut(s) 79, 593, 719, 815, 851, 866
MmeI TCCRAC 1 cut(s) 75
Mox20I TGGCCA 1 cut(s) 746
MscI TGGCCA 1 cut(s) 746
MseI TTAA 1 cut(s) 990
MslI CAYNNNNRTG 2 cut(s) 11, 197
Msp20I TGGCCA 1 cut(s) 746
MspA1I CMGCKG 3 cut(s) 454, 760, 896
MvaI CCWGG 5 cut(s) 20, 341, 377, 560, 1046
MvnI CGCG 2 cut(s) 796, 896
MwoI GCNNNNNNNGC 6 cut(s) 350, 499, 623, 743, 845, 953
NcoI CCATGG 1 cut(s) 165
NdeII GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
NlaIII CATG 5 cut(s) 10, 169, 502, 695, 858
NlaIV GGNNCC 2 cut(s) 216, 1090
NmuCI GTSAC 2 cut(s) 142, 316
NspI RCATGY 1 cut(s) 10
OliI CACNNNNGTG 1 cut(s) 197
PaqCI CACCTGC 1 cut(s) 667
PcsI WCGNNNNNNNCGW 2 cut(s) 474, 627
PfeI GAWTC 2 cut(s) 439, 565
PflMI CCANNNNNTGG 1 cut(s) 970
PfoI TCCNGGA 1 cut(s) 1044
PinAI ACCGGT 1 cut(s) 347
PkrI GCNGC 8 cut(s) 154, 453, 456, 759, 838, 958, 961, 1006
PleI GAGTC 6 cut(s) 78, 592, 719, 815, 850, 866
PpsI GAGTC 6 cut(s) 78, 592, 719, 815, 850, 866
Psp6I CCWGG 5 cut(s) 18, 339, 375, 558, 1044
PspGI CCWGG 5 cut(s) 18, 339, 375, 558, 1044
PspN4I GGNNCC 2 cut(s) 216, 1090
PspPI GGNCC 2 cut(s) 214, 495
PstI CTGCAG 1 cut(s) 841
PstNI CAGNNNCTG 2 cut(s) 457, 845
PsuI RGATCY 2 cut(s) 281, 508
PvuII CAGCTG 1 cut(s) 454
RsaI GTAC 5 cut(s) 210, 614, 923, 1013, 1108
RsaNI GTAC 5 cut(s) 209, 613, 922, 1012, 1107
RseI CAYNNNNRTG 2 cut(s) 11, 197
SacII CCGCGG 1 cut(s) 897
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 1 cut(s) 990
SatI GCNGC 8 cut(s) 153, 452, 455, 758, 837, 957, 960, 1005
Sau3AI GATC 7 cut(s) 127, 281, 370, 380, 508, 883, 1117
Sau96I GGNCC 2 cut(s) 214, 495
SchI GAGTC 6 cut(s) 79, 593, 719, 815, 851, 866
SduI GDGCHC 1 cut(s) 225
SfaNI GCATC 4 cut(s) 19, 307, 582, 613
SfcI CTRYAG 1 cut(s) 837
Sfr303I CCGCGG 1 cut(s) 897
SgrBI CCGCGG 1 cut(s) 897
SinI GGWCC 1 cut(s) 495
SmaI CCCGGG 2 cut(s) 581, 818
SmiMI CAYNNNNRTG 2 cut(s) 11, 197
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
Sse9I AATT 1 cut(s) 1028
SspMI CTAG 1 cut(s) 53
StyI CCWWGG 2 cut(s) 52, 165
TaaI ACNGT 1 cut(s) 1078
TaiI ACGT 1 cut(s) 48
TaqI TCGA 7 cut(s) 42, 48, 81, 301, 528, 538, 621
TaqII GACCGA 1 cut(s) 63
TasI AATT 1 cut(s) 1028
TatI WGTACW 1 cut(s) 921
TauI GCSGC 1 cut(s) 1007
TfiI GAWTC 2 cut(s) 439, 565
Tru1I TTAA 1 cut(s) 990
Tru9I TTAA 1 cut(s) 990
TscAI CASTG 3 cut(s) 225, 247, 331
TseFI GTSAC 2 cut(s) 142, 316
TseI GCWGC 7 cut(s) 152, 451, 454, 757, 836, 956, 959
Tsp45I GTSAC 2 cut(s) 142, 316
TspDTI ATGAA 3 cut(s) 495, 680, 1035
TspMI CCCGGG 2 cut(s) 579, 816
TspRI CASTG 3 cut(s) 225, 247, 331
Van91I CCANNNNNTGG 1 cut(s) 970
VpaK11BI GGWCC 1 cut(s) 495
XapI RAATTY 1 cut(s) 1028
XceI RCATGY 1 cut(s) 10
XmaI CCCGGG 2 cut(s) 579, 816
XmaJI CCTAGG 1 cut(s) 52
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 1 cut(s) 53
ZraI GACGTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.