Rmu_sc0014406.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014406.1
OG0000087
Physical Location & Seq
Forward (+)
2564 .. 3700
1137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014406.1_g000001.1.cds

Sequence Viewer

Length: 669 bp
atggagttgaggcatagccaacagcatggcttccgcggtactggtgcgaagaggcagaagaaagatcacccgagatcagagtcgtcgccttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagttcgtgaggtccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaagataatactccccaggagaatagccgtctcgcccgggaatcaatgatgcaggcactcttcaatgtgtacgccattgatgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccaggcagaaggctgcagagtctgccgtctcatcgaaggagaaggcagaccatctggaggatcgccttcccgctgagaggcatgaggccgtggaggagtacaagtcctcggatgagctcatctctatgttggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggacgggtatttagataaggccaaattcaggcggggtctcctggagataaagaagaaggatcgggaagcggcggccaagtctggtgccggtgggtctcagagtaccggaggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

222

Amino Acids

24.74

Weight (kDa)

7.88

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 629
AccII CGCG 1 cut(s) 36
AciI CCGC 8 cut(s) 34, 36, 111, 435, 545, 577, 614, 617
AclWI GGATC 3 cut(s) 210, 432, 612
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 1 cut(s) 569
AcuI CTGAAG 2 cut(s) 227, 362
AfaI GTAC 5 cut(s) 40, 161, 308, 464, 649
AfiI CCNNNNNNNGG 8 cut(s) 95, 198, 226, 232, 421, 441, 511, 573
AgsI TTSAA 1 cut(s) 301
AjnI CCWGG 3 cut(s) 252, 365, 585
AluBI AGCT 2 cut(s) 148, 481
AluI AGCT 2 cut(s) 148, 481
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 4 cut(s) 272, 397, 587, 645
AlwI GGATC 3 cut(s) 210, 432, 612
AlwNI CAGNNNCTG 2 cut(s) 151, 386
Ama87I CYCGRG 2 cut(s) 70, 273
AoxI GGCC 5 cut(s) 97, 234, 450, 564, 618
ApeKI GCWGC 5 cut(s) 145, 148, 377, 497, 500
ApoI RAATTY 1 cut(s) 569
AspS9I GGNCC 2 cut(s) 189, 234
AsuC2I CCSGG 3 cut(s) 227, 274, 275
AsuHPI GGTGA 1 cut(s) 59
AvaI CYCGRG 2 cut(s) 70, 273
AvaII GGWCC 1 cut(s) 189
BanI GGYRCC 1 cut(s) 629
BanII GRGCYC 1 cut(s) 483
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 5 cut(s) 135, 157, 364, 484, 487
BccI CCATC 2 cut(s) 146, 423
BceAI ACGGC 3 cut(s) 249, 374, 437
BciT130I CCWGG 3 cut(s) 254, 367, 587
BcnI CCSGG 3 cut(s) 227, 274, 275
BcoDI GTCTC 4 cut(s) 272, 397, 587, 645
BfmI CTRYAG 1 cut(s) 378
BisI GCNGC 7 cut(s) 146, 149, 378, 498, 501, 615, 618
BlsI GCNGC 7 cut(s) 147, 150, 379, 499, 502, 616, 619
Bme1390I CCNGG 6 cut(s) 227, 254, 274, 275, 367, 587
Bme18I GGWCC 1 cut(s) 189
BmeT110I CYCGRG 2 cut(s) 70, 273
BmgT120I GGNCC 2 cut(s) 189, 234
BmiI GGNNCC 1 cut(s) 631
BmrFI CCNGG 6 cut(s) 227, 254, 274, 275, 367, 587
BmsI GCATC 2 cut(s) 276, 307
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 3 cut(s) 349, 440, 608
BpuMI CCSGG 3 cut(s) 227, 274, 275
BsaBI GATNNNNATC 1 cut(s) 336
BsaI GGTCTC 2 cut(s) 587, 645
BsaJI CCNNGG 5 cut(s) 34, 252, 273, 453, 471
BsaWI WCCGGW 2 cut(s) 118, 650
BsaXI ACNNNNNCTCC 2 cut(s) 452, 482
Bsc4I CCNNNNNNNGG 8 cut(s) 95, 198, 226, 232, 421, 441, 511, 573
Bse118I RCCGGY 1 cut(s) 632
Bse1I ACTGG 1 cut(s) 46
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 3 cut(s) 254, 367, 587
BseDI CCNNGG 5 cut(s) 34, 252, 273, 453, 471
BseGI GGATG 1 cut(s) 481
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 8 cut(s) 95, 198, 226, 232, 421, 441, 511, 573
BseMII CTCAG 3 cut(s) 143, 429, 656
BseNI ACTGG 1 cut(s) 46
BseRI GAGGAG 2 cut(s) 362, 473
BseXI GCAGC 5 cut(s) 135, 157, 364, 484, 487
Bsh1236I CGCG 1 cut(s) 36
Bsh1285I CGRYCG 2 cut(s) 226, 661
BshFI GGCC 5 cut(s) 99, 236, 452, 566, 620
BshNI GGYRCC 1 cut(s) 629
BsiEI CGRYCG 2 cut(s) 226, 661
BsiHKAI GWGCWC 1 cut(s) 483
BsiHKCI CYCGRG 2 cut(s) 70, 273
BsiSI CCGG 5 cut(s) 119, 226, 274, 633, 651
BslI CCNNNNNNNGG 8 cut(s) 95, 198, 226, 232, 421, 441, 511, 573
BsmAI GTCTC 4 cut(s) 272, 397, 587, 645
BsmBI CGTCTC 2 cut(s) 272, 397
BsnI GGCC 5 cut(s) 99, 236, 452, 566, 620
Bso31I GGTCTC 2 cut(s) 587, 645
BsoBI CYCGRG 2 cut(s) 70, 273
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 6 cut(s) 64, 74, 202, 424, 604, 658
BspACI CCGC 8 cut(s) 34, 36, 111, 435, 545, 577, 614, 617
BspANI GGCC 5 cut(s) 99, 236, 452, 566, 620
BspCNI CTCAG 3 cut(s) 144, 430, 655
BspFNI CGCG 1 cut(s) 36
BspHI TCATGA 1 cut(s) 522
BspLI GGNNCC 1 cut(s) 631
BspMAI CTGCAG 1 cut(s) 382
BspPI GGATC 3 cut(s) 210, 432, 612
BspT107I GGYRCC 1 cut(s) 629
BspTNI GGTCTC 2 cut(s) 587, 645
BsrFI RCCGGY 1 cut(s) 632
BsrI ACTGG 1 cut(s) 46
BssAI RCCGGY 1 cut(s) 632
BssECI CCNNGG 5 cut(s) 34, 252, 273, 453, 471
BssMI GATC 6 cut(s) 64, 74, 202, 424, 604, 658
Bst2UI CCWGG 3 cut(s) 254, 367, 587
Bst6I CTCTTC 2 cut(s) 44, 302
BstAPI GCANNNNNTGC 1 cut(s) 386
BstC8I GCNNGC 2 cut(s) 291, 322
BstDEI CTNAG 3 cut(s) 152, 438, 642
BstDSI CCRYGG 2 cut(s) 34, 453
BstF5I GGATG 1 cut(s) 481
BstFNI CGCG 1 cut(s) 36
BstKTI GATC 6 cut(s) 67, 77, 205, 427, 607, 661
BstMAI GTCTC 4 cut(s) 272, 397, 587, 645
BstMBI GATC 6 cut(s) 64, 74, 202, 424, 604, 658
BstMCI CGRYCG 2 cut(s) 226, 661
BstMWI GCNNNNNNNGC 3 cut(s) 142, 317, 386
BstNI CCWGG 3 cut(s) 254, 367, 587
BstSCI CCNGG 6 cut(s) 225, 252, 272, 273, 365, 585
BstSFI CTRYAG 1 cut(s) 378
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 5 cut(s) 135, 157, 364, 484, 487
BstX2I RGATCY 1 cut(s) 202
BstXI CCANNNNNNTGG 1 cut(s) 26
BstYI RGATCY 1 cut(s) 202
BsuRI GGCC 5 cut(s) 99, 236, 452, 566, 620
BtgI CCRYGG 2 cut(s) 34, 453
BtsCI GGATG 1 cut(s) 481
Cac8I GCNNGC 2 cut(s) 291, 322
CaiI CAGNNNCTG 2 cut(s) 151, 386
CciI TCATGA 1 cut(s) 522
Cfr10I RCCGGY 1 cut(s) 632
Cfr13I GGNCC 2 cut(s) 189, 234
Cfr42I CCGCGG 1 cut(s) 37
Cfr9I CCCGGG 1 cut(s) 273
Csp6I GTAC 5 cut(s) 39, 160, 307, 463, 648
CviAII CATG 4 cut(s) 26, 193, 446, 523
CviQI GTAC 5 cut(s) 39, 160, 307, 463, 648
DdeI CTNAG 3 cut(s) 152, 438, 642
DpnI GATC 6 cut(s) 66, 76, 204, 426, 606, 660
DpnII GATC 6 cut(s) 64, 74, 202, 424, 604, 658
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 2 cut(s) 44, 302
EarI CTCTTC 2 cut(s) 44, 302
EciI GGCGGA 1 cut(s) 560
Ecl136II GAGCTC 1 cut(s) 481
Eco24I GRGCYC 1 cut(s) 483
Eco31I GGTCTC 2 cut(s) 587, 645
Eco47I GGWCC 1 cut(s) 189
Eco53kI GAGCTC 1 cut(s) 481
Eco57I CTGAAG 2 cut(s) 227, 362
Eco88I CYCGRG 2 cut(s) 70, 273
EcoICRI GAGCTC 1 cut(s) 481
EcoRII CCWGG 3 cut(s) 252, 365, 585
EcoT38I GRGCYC 1 cut(s) 483
Esp3I CGTCTC 2 cut(s) 272, 397
FaeI CATG 4 cut(s) 29, 196, 449, 526
FaiI YATR 6 cut(s) 15, 27, 194, 447, 491, 524
FatI CATG 4 cut(s) 25, 192, 445, 522
FauI CCCGC 3 cut(s) 118, 442, 570
Fnu4HI GCNGC 7 cut(s) 146, 149, 378, 498, 501, 615, 618
FokI GGATG 1 cut(s) 488
FriOI GRGCYC 1 cut(s) 483
Fsp4HI GCNGC 7 cut(s) 146, 149, 378, 498, 501, 615, 618
GluI GCNGC 7 cut(s) 146, 149, 378, 498, 501, 615, 618
GsuI CTGGAG 3 cut(s) 349, 440, 608
HaeIII GGCC 5 cut(s) 99, 236, 452, 566, 620
HapII CCGG 5 cut(s) 119, 226, 274, 633, 651
Hin1II CATG 4 cut(s) 29, 196, 449, 526
HinfI GANTC 3 cut(s) 80, 278, 383
HpaII CCGG 5 cut(s) 119, 226, 274, 633, 651
HphI GGTGA 1 cut(s) 59
Hpy166II GTNNAC 1 cut(s) 307
Hpy188I TCNGA 5 cut(s) 79, 207, 342, 475, 645
Hpy188III TCNNGA 4 cut(s) 184, 419, 523, 608
Hpy8I GTNNAC 1 cut(s) 307
Hpy99I CGWCG 1 cut(s) 88
HpyAV CCTTC 8 cut(s) 99, 202, 337, 367, 394, 400, 440, 595
HpyCH4V TGCA 2 cut(s) 289, 380
HpyF10VI GCNNNNNNNGC 3 cut(s) 142, 317, 386
HpyF3I CTNAG 3 cut(s) 152, 438, 642
Hsp92II CATG 4 cut(s) 29, 196, 449, 526
KspI CCGCGG 1 cut(s) 37
Kzo9I GATC 6 cut(s) 64, 74, 202, 424, 604, 658
Lsp1109I GCAGC 5 cut(s) 135, 157, 364, 484, 487
LweI GCATC 2 cut(s) 276, 307
MalI GATC 6 cut(s) 66, 76, 204, 426, 606, 660
MboI GATC 6 cut(s) 64, 74, 202, 424, 604, 658
MboII GAAGA 5 cut(s) 61, 70, 289, 341, 610
MflI RGATCY 1 cut(s) 202
MhlI GDGCHC 1 cut(s) 483
MluCI AATT 1 cut(s) 569
MlyI GAGTC 2 cut(s) 89, 392
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 1 cut(s) 488
MspA1I CMGCKG 3 cut(s) 36, 148, 437
MspI CCGG 5 cut(s) 119, 226, 274, 633, 651
MspR9I CCNGG 6 cut(s) 227, 254, 274, 275, 367, 587
MvaI CCWGG 3 cut(s) 254, 367, 587
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 3 cut(s) 142, 317, 386
NciI CCSGG 3 cut(s) 227, 274, 275
NdeII GATC 6 cut(s) 64, 74, 202, 424, 604, 658
NlaIII CATG 4 cut(s) 29, 196, 449, 526
NlaIV GGNNCC 1 cut(s) 631
PagI TCATGA 1 cut(s) 522
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PfeI GAWTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 585
PkrI GCNGC 7 cut(s) 147, 150, 379, 499, 502, 616, 619
Ple19I CGATCG 1 cut(s) 661
PleI GAGTC 2 cut(s) 88, 391
PpsI GAGTC 2 cut(s) 88, 391
Psp124BI GAGCTC 1 cut(s) 483
Psp6I CCWGG 3 cut(s) 252, 365, 585
PspGI CCWGG 3 cut(s) 252, 365, 585
PspN4I GGNNCC 1 cut(s) 631
PspPI GGNCC 2 cut(s) 189, 234
PstI CTGCAG 1 cut(s) 382
PstNI CAGNNNCTG 2 cut(s) 151, 386
PsuI RGATCY 1 cut(s) 202
PvuI CGATCG 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 148
RsaI GTAC 5 cut(s) 40, 161, 308, 464, 649
RsaNI GTAC 5 cut(s) 39, 160, 307, 463, 648
RseI CAYNNNNRTG 1 cut(s) 488
SacI GAGCTC 1 cut(s) 483
SacII CCGCGG 1 cut(s) 37
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 7 cut(s) 146, 149, 378, 498, 501, 615, 618
Sau3AI GATC 6 cut(s) 64, 74, 202, 424, 604, 658
Sau96I GGNCC 2 cut(s) 189, 234
SchI GAGTC 2 cut(s) 89, 392
ScrFI CCNGG 6 cut(s) 227, 254, 274, 275, 367, 587
SduI GDGCHC 1 cut(s) 483
SetI ASST 6 cut(s) 150, 191, 222, 354, 363, 483
SfaNI GCATC 2 cut(s) 276, 307
SfcI CTRYAG 1 cut(s) 378
Sfr303I CCGCGG 1 cut(s) 37
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 1 cut(s) 189
SmaI CCCGGG 1 cut(s) 275
SmiMI CAYNNNNRTG 1 cut(s) 488
Sse9I AATT 1 cut(s) 569
SsiI CCGC 8 cut(s) 34, 36, 111, 435, 545, 577, 614, 617
SstI GAGCTC 1 cut(s) 483
StyD4I CCNGG 6 cut(s) 225, 252, 272, 273, 365, 585
TaqI TCGA 2 cut(s) 222, 398
TasI AATT 1 cut(s) 569
TatI WGTACW 1 cut(s) 462
TauI GCSGC 2 cut(s) 617, 620
TfiI GAWTC 1 cut(s) 278
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TseI GCWGC 5 cut(s) 145, 148, 377, 497, 500
TspDTI ATGAA 2 cut(s) 189, 539
TspMI CCCGGG 1 cut(s) 273
VpaK11BI GGWCC 1 cut(s) 189
XapI RAATTY 1 cut(s) 569
XmaI CCCGGG 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.