Rmu_sc0000045.1_g000034

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000045.1
OG0000087
Physical Location & Seq
Reverse (-)
121103 .. 124261
3159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000045.1_g000034.1.cds

Sequence Viewer

Length: 2265 bp
atgcccgtcccttcctctgccgaggcttcgagaaatgggagaacgcgtgggacacgtgtagcgatcctacggcagaggtcgcttcggtttcgacgactatttgggtttgcttcgttttgtgggttttgggttgaatttctggatatagcaagatttgaggtccccggtaccatagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcctctaccaggcgagttgaaatggacatcgaccggtacccaggccgggtagaccaattagagaagaacacggggtcctcgactggggtgttctcggagagtagtggggagtccaatgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggaccgtatgcgatgaacctgggagaagcatgacgatgaaggagatagtagacatgcggctgaagtgggggatacccgacgcagtagagcttaggcctcttagggatggggaactggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgttacccctgccctggtgtctacagtatctgctgcggatgctgaacctgtcaccggggcagctaaccccgaatgccgttcatcaaatatgcagtatgatggccatgtgggacctgtaccagcaagggtggccttccataaatgagttccgcgcggtacaccgggtactgtattctaggaagcggtcttgtgcgggtacggtgacctttgccgctagggattacgggccgctagttaccgatatgcctacctcgatgagcaaaatgtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataaaaagtggcagctgaccggtaccttccaagctatcggggaccaatcctatacgctatccgaagtagaaaagaagaggatagcccgggtatatgtcgtgtggtcagataaagagaggagctcttataggttcatccggcactctatactttttaggctagggttagggtggctccccgtgaaagccccaaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgctcaattaatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagtgtctaaaggcacgagtaggtctattgaagagaccctgttggaaattaccgatgaggggtacggtgaacctgatccagacgcccctgtgacccgcgccgcgcagccctccatggccgatgtcattacgatagctgacaccggggtgggaaaagtaccggcctcagtgcccatttcctctcgttccactgggagcgatgaggtcttactcccaggtgagaagaagagatcccacaagcatcggcatcgaaccgataaggaggtgacgtacactggccgagatgtccagggtaccggtgcaaagaggcagaagaaagatcacccgggaccagggccgtcgccctctcttggcttgttatctcccgccgttccggacattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctttcccgggagtcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgagaaagatactcatctgaaggaggaggttagcaacctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcgttgagggctgagatggccacctctaagcagcggattgcggagcttgagggtgaggttactgaggtgcgggaggaggtcaagaacgcccgggactccgagaaaaaggctgcaaagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatcgctatgctggctgctgcccaagataaggctgtcatcatgaagtttaagaagtgggtggcggccgggtacctagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagcaggaggcggcggccaaatccagtgccggtaatctcctggagaaaaggaagaaggagcaggaggcggcggccaaatccagtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

754

Amino Acids

84.09

Weight (kDa)

8.94

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1747
AatII GACGTC 1 cut(s) 1218
Acc36I ACCTGC 1 cut(s) 1747
Acc65I GGTACC 5 cut(s) 167, 261, 947, 1514, 2091
AccB1I GGYRCC 5 cut(s) 167, 261, 947, 1514, 2091
AccBSI CCGCTC 1 cut(s) 1801
AccI GTMKAC 4 cut(s) 276, 486, 634, 1218
AccII CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
AccIII TCCGGA 1 cut(s) 1594
AclWI GGATC 6 cut(s) 58, 220, 370, 1292, 1446, 1971
AcoI YGGCCR 9 cut(s) 390, 552, 714, 1338, 1498, 1824, 2085, 2157, 2214
AcsI RAATTY 2 cut(s) 134, 2108
AcuI CTGAAG 2 cut(s) 518, 1748
AcvI CACGTG 1 cut(s) 56
AcyI GRCGYC 3 cut(s) 1215, 1305, 1704
AflIII ACRYGT 3 cut(s) 44, 53, 55
AgeI ACCGGT 3 cut(s) 258, 944, 1517
AgsI TTSAA 4 cut(s) 134, 245, 1253, 1687
AhdI GACNNNNNGTC 1 cut(s) 1225
AleI CACNNNNGTG 1 cut(s) 1367
AloI GAACNNNNNNTCC 2 cut(s) 284, 316
Alw21I GWGCWC 1 cut(s) 1049
Alw26I GTCTC 4 cut(s) 1250, 1936, 2126, 2241
AlwI GGATC 6 cut(s) 58, 220, 370, 1292, 1446, 1971
AlwNI CAGNNNCTG 1 cut(s) 643
Ama87I CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
Aor13HI TCCGGA 1 cut(s) 1594
ApeKI GCWGC 9 cut(s) 583, 646, 673, 937, 1327, 1837, 1916, 2036, 2039
ApoI RAATTY 2 cut(s) 134, 2108
AseI ATTAAT 1 cut(s) 1169
AsiGI ACCGGT 3 cut(s) 258, 944, 1517
Asp718I GGTACC 5 cut(s) 167, 261, 947, 1514, 2091
AspLEI GCGC 4 cut(s) 583, 767, 1322, 1327
AspS9I GGNCC 9 cut(s) 160, 300, 373, 438, 724, 839, 967, 1550, 1556
AsuHPI GGTGA 9 cut(s) 359, 657, 826, 1301, 1451, 1498, 1535, 1771, 1871
AvaI CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
AvaII GGWCC 6 cut(s) 160, 300, 438, 724, 967, 1550
BaeGI GKGCMC 2 cut(s) 1395, 1681
BaeI ACNNNNGTAYC 2 cut(s) 159, 192
BalI TGGCCA 3 cut(s) 392, 716, 1826
BanI GGYRCC 5 cut(s) 167, 261, 947, 1514, 2091
BanII GRGCYC 1 cut(s) 1049
BarI GAAGNNNNNNTAC 2 cut(s) 404, 436
BauI CACGAG 3 cut(s) 587, 1237, 1985
BbrPI CACGTG 1 cut(s) 56
Bbv12I GWGCWC 1 cut(s) 1049
BbvI GCAGC 9 cut(s) 570, 633, 685, 949, 1339, 1849, 1903, 2023, 2026
BccI CCATC 7 cut(s) 175, 536, 706, 1147, 1706, 1816, 2243
BceAI ACGGC 7 cut(s) 86, 674, 1543, 1574, 1635, 1913, 1976
BcgI CGANNNNNNTGC 2 cut(s) 1451, 1485
BciVI GTATCC 2 cut(s) 199, 501
BcoDI GTCTC 4 cut(s) 1250, 1936, 2126, 2241
BfaI CTAG 7 cut(s) 789, 828, 845, 899, 1085, 1223, 2096
BfmI CTRYAG 1 cut(s) 635
BfoI RGCGCY 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 1747
BfuI GTATCC 2 cut(s) 199, 501
Bme18I GGWCC 6 cut(s) 160, 300, 438, 724, 967, 1550
BmeRI GACNNNNNGTC 1 cut(s) 1225
BmeT110I CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
BmgT120I GGNCC 9 cut(s) 160, 300, 373, 438, 724, 839, 967, 1550, 1556
BmrI ACTGGG 2 cut(s) 318, 1422
BmsI GCATC 6 cut(s) 642, 1150, 1189, 1471, 1477, 1662
BmuI ACTGGG 2 cut(s) 318, 1422
BplI GAGNNNNNCTC 4 cut(s) 1031, 1063, 1790, 1822
BpmI CTGGAG 4 cut(s) 1811, 1979, 2147, 2204
Bpu10I CCTNAGC 1 cut(s) 527
BpuEI CTTGAG 1 cut(s) 1874
BsaAI YACGTR 1 cut(s) 56
BsaBI GATNNNNATC 2 cut(s) 1722, 2253
BsaHI GRCGYC 3 cut(s) 1215, 1305, 1704
BsaI GGTCTC 3 cut(s) 1250, 2126, 2241
BsaWI WCCGGW 4 cut(s) 258, 944, 1517, 1594
BsaXI ACNNNNNCTCC 6 cut(s) 31, 61, 1475, 1505, 1991, 2021
Bse118I RCCGGY 6 cut(s) 258, 944, 1381, 1517, 2171, 2228
Bse1I ACTGG 7 cut(s) 223, 313, 555, 1417, 1501, 2166, 2223
Bse8I GATNNNNATC 2 cut(s) 1722, 2253
BseAI TCCGGA 1 cut(s) 1594
BseGI GGATG 7 cut(s) 186, 547, 657, 1059, 1158, 1162, 2020
BseJI GATNNNNATC 2 cut(s) 1722, 2253
BseMII CTCAG 4 cut(s) 1401, 1809, 1860, 2252
BseNI ACTGG 7 cut(s) 223, 313, 555, 1417, 1501, 2166, 2223
BseRI GAGGAG 5 cut(s) 1057, 1157, 1748, 1895, 2012
BseSI GKGCMC 2 cut(s) 1395, 1681
BseX3I CGGCCG 1 cut(s) 2085
BseXI GCAGC 9 cut(s) 570, 633, 685, 949, 1339, 1849, 1903, 2023, 2026
BsgI GTGCAG 2 cut(s) 569, 1190
Bsh1236I CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
Bsh1285I CGRYCG 3 cut(s) 259, 1612, 2088
BshNI GGYRCC 5 cut(s) 167, 261, 947, 1514, 2091
BshTI ACCGGT 3 cut(s) 258, 944, 1517
BsiEI CGRYCG 3 cut(s) 259, 1612, 2088
BsiHKAI GWGCWC 1 cut(s) 1049
BsiHKCI CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
BslFI GGGAC 8 cut(s) 64, 146, 451, 737, 980, 1563, 1817, 1913
BsmAI GTCTC 4 cut(s) 1250, 1936, 2126, 2241
BsmBI CGTCTC 1 cut(s) 1936
BsmFI GGGAC 8 cut(s) 64, 146, 451, 737, 980, 1563, 1817, 1913
BsmI GAATGC 2 cut(s) 405, 691
Bso31I GGTCTC 3 cut(s) 1250, 2126, 2241
BsoBI CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
Bsp1286I GDGCHC 3 cut(s) 1049, 1395, 1681
Bsp13I TCCGGA 1 cut(s) 1594
Bsp143I GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
Bsp19I CCATGG 1 cut(s) 1335
BspCNI CTCAG 4 cut(s) 1400, 1810, 1861, 2251
BspEI TCCGGA 1 cut(s) 1594
BspFNI CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
BspHI TCATGA 1 cut(s) 2061
BspMI ACCTGC 1 cut(s) 1747
BspPI GGATC 6 cut(s) 58, 220, 370, 1292, 1446, 1971
BspT107I GGYRCC 5 cut(s) 167, 261, 947, 1514, 2091
BspTNI GGTCTC 3 cut(s) 1250, 2126, 2241
BsrBI CCGCTC 1 cut(s) 1801
BsrFI RCCGGY 6 cut(s) 258, 944, 1381, 1517, 2171, 2228
BsrI ACTGG 7 cut(s) 223, 313, 555, 1417, 1501, 2166, 2223
BssAI RCCGGY 6 cut(s) 258, 944, 1381, 1517, 2171, 2228
BssMI GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
BssNI GRCGYC 3 cut(s) 1215, 1305, 1704
BssSI CACGAG 3 cut(s) 587, 1237, 1985
BssT1I CCWWGG 2 cut(s) 604, 1335
Bst2BI CACGAG 3 cut(s) 587, 1237, 1985
Bst4CI ACNGT 6 cut(s) 388, 442, 639, 783, 814, 1289
Bst6I CTCTTC 4 cut(s) 995, 1248, 1442, 1688
BstACI GRCGYC 3 cut(s) 1215, 1305, 1704
BstAPI GCANNNNNTGC 2 cut(s) 563, 1925
BstBAI YACGTR 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 1677, 1708, 2034
BstDEI CTNAG 7 cut(s) 527, 536, 1387, 1818, 1833, 1869, 2238
BstDSI CCRYGG 3 cut(s) 1335, 1974, 1992
BstEII GGTNACC 1 cut(s) 814
BstENI CCTNNNNNAGG 1 cut(s) 232
BstF5I GGATG 7 cut(s) 186, 547, 657, 1059, 1158, 1162, 2020
BstFNI CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
BstH2I RGCGCY 1 cut(s) 584
BstHHI GCGC 4 cut(s) 583, 767, 1322, 1327
BstKTI GATC 8 cut(s) 66, 215, 365, 1300, 1454, 1543, 1966, 2257
BstMAI GTCTC 4 cut(s) 1250, 1936, 2126, 2241
BstMBI GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
BstMCI CGRYCG 3 cut(s) 259, 1612, 2088
BstMWI GCNNNNNNNGC 8 cut(s) 79, 563, 652, 742, 1703, 1823, 1925, 2033
BstNSI RCATGY 2 cut(s) 493, 1180
BstPI GGTNACC 1 cut(s) 814
BstSFI CTRYAG 1 cut(s) 635
BstSLI GKGCMC 2 cut(s) 1395, 1681
BstUI CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
BstV1I GCAGC 9 cut(s) 570, 633, 685, 949, 1339, 1849, 1903, 2023, 2026
BstX2I RGATCY 2 cut(s) 362, 1451
BstYI RGATCY 2 cut(s) 362, 1451
BstZI CGGCCG 1 cut(s) 2085
BsuI GTATCC 2 cut(s) 199, 501
BtgI CCRYGG 3 cut(s) 1335, 1974, 1992
BtgZI GCGATG 2 cut(s) 462, 1434
BtsCI GGATG 7 cut(s) 186, 547, 657, 1059, 1158, 1162, 2020
BtsIMutI CAGTG 6 cut(s) 393, 1395, 1410, 1494, 2173, 2230
BveI ACCTGC 1 cut(s) 1747
Cac8I GCNNGC 3 cut(s) 1677, 1708, 2034
CaiI CAGNNNCTG 1 cut(s) 643
CciI TCATGA 1 cut(s) 2061
CfoI GCGC 4 cut(s) 583, 767, 1322, 1327
Cfr10I RCCGGY 6 cut(s) 258, 944, 1381, 1517, 2171, 2228
Cfr13I GGNCC 9 cut(s) 160, 300, 373, 438, 724, 839, 967, 1550, 1556
Cfr42I CCGCGG 1 cut(s) 1977
Cfr9I CCCGGG 5 cut(s) 568, 1011, 1546, 1659, 1896
CseI GACGC 3 cut(s) 524, 1313, 1712
CspAI ACCGGT 3 cut(s) 258, 944, 1517
CviAII CATG 8 cut(s) 466, 490, 718, 1177, 1336, 1772, 1935, 2062
DdeI CTNAG 7 cut(s) 527, 536, 1387, 1818, 1833, 1869, 2238
DpnI GATC 8 cut(s) 65, 214, 364, 1299, 1453, 1542, 1965, 2256
DpnII GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
DriI GACNNNNNGTC 1 cut(s) 1225
EaeI YGGCCR 9 cut(s) 390, 552, 714, 1338, 1498, 1824, 2085, 2157, 2214
EagI CGGCCG 1 cut(s) 2085
Eam1104I CTCTTC 4 cut(s) 995, 1248, 1442, 1688
Eam1105I GACNNNNNGTC 1 cut(s) 1225
EarI CTCTTC 4 cut(s) 995, 1248, 1442, 1688
Ecl136II GAGCTC 1 cut(s) 1047
EclXI CGGCCG 1 cut(s) 2085
Eco130I CCWWGG 2 cut(s) 604, 1335
Eco147I AGGCCT 1 cut(s) 532
Eco24I GRGCYC 1 cut(s) 1049
Eco31I GGTCTC 3 cut(s) 1250, 2126, 2241
Eco47I GGWCC 6 cut(s) 160, 300, 438, 724, 967, 1550
Eco52I CGGCCG 1 cut(s) 2085
Eco53kI GAGCTC 1 cut(s) 1047
Eco57I CTGAAG 2 cut(s) 518, 1748
Eco72I CACGTG 1 cut(s) 56
Eco88I CYCGRG 6 cut(s) 398, 568, 1011, 1546, 1659, 1896
Eco91I GGTNACC 1 cut(s) 814
EcoICRI GAGCTC 1 cut(s) 1047
EcoNI CCTNNNNNAGG 1 cut(s) 232
EcoO109I RGGNCCY 4 cut(s) 160, 300, 373, 724
EcoO65I GGTNACC 1 cut(s) 814
EcoT14I CCWWGG 2 cut(s) 604, 1335
EcoT38I GRGCYC 1 cut(s) 1049
ErhI CCWWGG 2 cut(s) 604, 1335
Esp3I CGTCTC 1 cut(s) 1936
FaeI CATG 8 cut(s) 469, 493, 721, 1180, 1339, 1775, 1938, 2065
FaqI GGGAC 8 cut(s) 64, 146, 451, 737, 980, 1563, 1817, 1913
FatI CATG 8 cut(s) 465, 489, 717, 1176, 1335, 1771, 1934, 2061
FauI CCCGC 8 cut(s) 799, 1325, 1594, 1668, 1794, 1869, 1981, 2109
FblI GTMKAC 4 cut(s) 276, 486, 634, 1218
FokI GGATG 7 cut(s) 193, 554, 664, 1046, 1165, 1169, 2027
FriOI GRGCYC 1 cut(s) 1049
FspBI CTAG 7 cut(s) 789, 828, 845, 899, 1085, 1223, 2096
GlaI GCGC 4 cut(s) 582, 766, 1321, 1326
GsuI CTGGAG 4 cut(s) 1811, 1979, 2147, 2204
HaeII RGCGCY 1 cut(s) 584
HgaI GACGC 3 cut(s) 524, 1313, 1712
HhaI GCGC 4 cut(s) 583, 767, 1322, 1327
Hin1I GRCGYC 3 cut(s) 1215, 1305, 1704
Hin1II CATG 8 cut(s) 469, 493, 721, 1180, 1339, 1775, 1938, 2065
Hin6I GCGC 4 cut(s) 581, 765, 1320, 1325
HinP1I GCGC 4 cut(s) 581, 765, 1320, 1325
HincII GTYRAC 1 cut(s) 1219
HindII GTYRAC 1 cut(s) 1219
HinfI GANTC 8 cut(s) 185, 335, 592, 1645, 1664, 1805, 1901, 1952
HphI GGTGA 9 cut(s) 359, 657, 826, 1301, 1451, 1498, 1535, 1771, 1871
Hpy166II GTNNAC 9 cut(s) 277, 423, 487, 635, 772, 1219, 1292, 1494, 1693
Hpy188I TCNGA 9 cut(s) 190, 322, 411, 988, 1033, 1728, 1906, 2014, 2241
Hpy188III TCNNGA 8 cut(s) 30, 140, 398, 1301, 1595, 1888, 1958, 2062
Hpy8I GTNNAC 9 cut(s) 277, 423, 487, 635, 772, 1219, 1292, 1494, 1693
Hpy99I CGWCG 7 cut(s) 96, 220, 518, 1217, 1220, 1564, 1706
HpyCH4III ACNGT 6 cut(s) 388, 442, 639, 783, 814, 1289
HpyCH4IV ACGT 3 cut(s) 55, 1215, 1490
HpyCH4V TGCA 5 cut(s) 586, 705, 1207, 1523, 1919
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 563, 652, 742, 1703, 1823, 1925, 2033
HpyF3I CTNAG 7 cut(s) 527, 536, 1387, 1818, 1833, 1869, 2238
HpySE526I ACGT 3 cut(s) 55, 1215, 1490
Hsp92I GRCGYC 3 cut(s) 1215, 1305, 1704
Hsp92II CATG 8 cut(s) 469, 493, 721, 1180, 1339, 1775, 1938, 2065
HspAI GCGC 4 cut(s) 581, 765, 1320, 1325
Kpn2I TCCGGA 1 cut(s) 1594
KpnI GGTACC 5 cut(s) 171, 265, 951, 1518, 2095
KspI CCGCGG 1 cut(s) 1977
Kzo9I GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
LmnI GCTCC 8 cut(s) 603, 1044, 1104, 1416, 1798, 1849, 2143, 2200
Lsp1109I GCAGC 9 cut(s) 570, 633, 685, 949, 1339, 1849, 1903, 2023, 2026
LweI GCATC 6 cut(s) 642, 1150, 1189, 1471, 1477, 1662
MaeI CTAG 7 cut(s) 789, 828, 845, 899, 1085, 1223, 2096
MaeII ACGT 3 cut(s) 55, 1215, 1490
MaeIII GTNAC 8 cut(s) 382, 615, 663, 814, 847, 1312, 1486, 1864
MalI GATC 8 cut(s) 65, 214, 364, 1299, 1453, 1542, 1965, 2256
MbiI CCGCTC 1 cut(s) 1801
MboI GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
MflI RGATCY 2 cut(s) 362, 1451
MhlI GDGCHC 3 cut(s) 1049, 1395, 1681
MlsI TGGCCA 3 cut(s) 392, 716, 1826
MluCI AATT 5 cut(s) 134, 281, 1166, 1269, 2108
MluI ACGCGT 1 cut(s) 44
MluNI TGGCCA 3 cut(s) 392, 716, 1826
MlyI GAGTC 5 cut(s) 344, 1673, 1799, 1895, 1946
MmeI TCCRAC 1 cut(s) 1245
Mox20I TGGCCA 3 cut(s) 392, 716, 1826
MroI TCCGGA 1 cut(s) 1594
MscI TGGCCA 3 cut(s) 392, 716, 1826
MseI TTAA 2 cut(s) 1169, 2070
MslI CAYNNNNRTG 3 cut(s) 470, 1181, 1367
Msp20I TGGCCA 3 cut(s) 392, 716, 1826
MspA1I CMGCKG 3 cut(s) 940, 1840, 1976
MteI GCGCNGCGC 1 cut(s) 1323
Mva1269I GAATGC 2 cut(s) 405, 691
MvnI CGCG 6 cut(s) 46, 765, 767, 1320, 1325, 1976
MwoI GCNNNNNNNGC 8 cut(s) 79, 563, 652, 742, 1703, 1823, 1925, 2033
NcoI CCATGG 1 cut(s) 1335
NdeII GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
NlaIII CATG 8 cut(s) 469, 493, 721, 1180, 1339, 1775, 1938, 2065
NmeAIII GCCGAG 3 cut(s) 46, 441, 1526
NmuCI GTSAC 4 cut(s) 663, 814, 1312, 1486
NspI RCATGY 2 cut(s) 493, 1180
OliI CACNNNNGTG 1 cut(s) 1367
PagI TCATGA 1 cut(s) 2061
PaqCI CACCTGC 1 cut(s) 1747
PceI AGGCCT 1 cut(s) 532
PcsI WCGNNNNNNNCGW 4 cut(s) 91, 215, 302, 1707
PctI GAATGC 2 cut(s) 405, 691
PfeI GAWTC 3 cut(s) 185, 592, 1645
PfoI TCCNGGA 2 cut(s) 2124, 2181
PinAI ACCGGT 3 cut(s) 258, 944, 1517
PleI GAGTC 5 cut(s) 343, 1672, 1799, 1895, 1946
PmaCI CACGTG 1 cut(s) 56
PmlI CACGTG 1 cut(s) 56
PpsI GAGTC 5 cut(s) 343, 1672, 1799, 1895, 1946
Ppu21I YACGTR 1 cut(s) 56
PpuMI RGGWCCY 3 cut(s) 160, 300, 724
PshBI ATTAAT 1 cut(s) 1169
Psp124BI GAGCTC 1 cut(s) 1049
Psp5II RGGWCCY 3 cut(s) 160, 300, 724
PspCI CACGTG 1 cut(s) 56
PspEI GGTNACC 1 cut(s) 814
PspPI GGNCC 9 cut(s) 160, 300, 373, 438, 724, 839, 967, 1550, 1556
PspPPI RGGWCCY 3 cut(s) 160, 300, 724
PstNI CAGNNNCTG 1 cut(s) 643
PsuI RGATCY 2 cut(s) 362, 1451
PvuII CAGCTG 1 cut(s) 940
RseI CAYNNNNRTG 3 cut(s) 470, 1181, 1367
SacI GAGCTC 1 cut(s) 1049
SacII CCGCGG 1 cut(s) 1977
SalI GTCGAC 1 cut(s) 1217
SaqAI TTAA 2 cut(s) 1169, 2070
Sau3AI GATC 8 cut(s) 63, 212, 362, 1297, 1451, 1540, 1963, 2254
Sau96I GGNCC 9 cut(s) 160, 300, 373, 438, 724, 839, 967, 1550, 1556
SchI GAGTC 5 cut(s) 344, 1673, 1799, 1895, 1946
SduI GDGCHC 3 cut(s) 1049, 1395, 1681
SfaNI GCATC 6 cut(s) 642, 1150, 1189, 1471, 1477, 1662
SfcI CTRYAG 1 cut(s) 635
Sfr303I CCGCGG 1 cut(s) 1977
SgrBI CCGCGG 1 cut(s) 1977
SinI GGWCC 6 cut(s) 160, 300, 438, 724, 967, 1550
SmaI CCCGGG 5 cut(s) 570, 1013, 1548, 1661, 1898
SmiMI CAYNNNNRTG 3 cut(s) 470, 1181, 1367
SmlI CTYRAG 1 cut(s) 1853
SmoI CTYRAG 1 cut(s) 1853
Sse9I AATT 5 cut(s) 134, 281, 1166, 1269, 2108
SseBI AGGCCT 1 cut(s) 532
SspMI CTAG 7 cut(s) 789, 828, 845, 899, 1085, 1223, 2096
SstI GAGCTC 1 cut(s) 1049
StuI AGGCCT 1 cut(s) 532
StyI CCWWGG 2 cut(s) 604, 1335
TaaI ACNGT 6 cut(s) 388, 442, 639, 783, 814, 1289
TaiI ACGT 3 cut(s) 58, 1218, 1493
TasI AATT 5 cut(s) 134, 281, 1166, 1269, 2108
TatI WGTACW 1 cut(s) 2001
TfiI GAWTC 3 cut(s) 185, 592, 1645
Tru1I TTAA 2 cut(s) 1169, 2070
Tru9I TTAA 2 cut(s) 1169, 2070
TscAI CASTG 6 cut(s) 393, 1395, 1417, 1501, 2173, 2230
TseFI GTSAC 4 cut(s) 663, 814, 1312, 1486
TseI GCWGC 9 cut(s) 583, 646, 673, 937, 1327, 1837, 1916, 2036, 2039
Tsp45I GTSAC 4 cut(s) 663, 814, 1312, 1486
TspDTI ATGAA 7 cut(s) 465, 488, 683, 1048, 1760, 2078, 2115
TspMI CCCGGG 5 cut(s) 568, 1011, 1546, 1659, 1896
TspRI CASTG 6 cut(s) 393, 1395, 1417, 1501, 2173, 2230
VpaK11BI GGWCC 6 cut(s) 160, 300, 438, 724, 967, 1550
VspI ATTAAT 1 cut(s) 1169
XagI CCTNNNNNAGG 1 cut(s) 232
XapI RAATTY 2 cut(s) 134, 2108
XceI RCATGY 2 cut(s) 493, 1180
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XmaI CCCGGG 5 cut(s) 568, 1011, 1546, 1659, 1896
XmiI GTMKAC 4 cut(s) 276, 486, 634, 1218
XspI CTAG 7 cut(s) 789, 828, 845, 899, 1085, 1223, 2096
ZraI GACGTC 1 cut(s) 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.