Rmu_sc0016218.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016218.1
OG0000087
Physical Location & Seq
Forward (+)
32949 .. 34869
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016218.1_g000005.1.cds

Sequence Viewer

Length: 1521 bp
atgaaggagatcatcgcgatgaggctgaagtggggaataccggatgaagtagagcttaggcctctgaaggctggagaggttgttgcgaatcctccttcgggatgggtggcgctgcacgagaaccagctccaccaagggctatcactacaactgccacggtgcctacagtatctcctgcggatgctgaacctgtcaccggggcagttgaccctgaatgcttggcgacaaattttgagtatgatggccatgtgggacttgcgccagaaacagtcttgtcaagggaccgtgacgtttgccctcgtgacgtttgccgcttcggactacgagcccctcgtcaccgatatgcccacctttcagagcaagaggtggaggaataacgtgtttcttactggaggacattggcagattaggaataagaaatggaacctaacaggtacgtttcaggccatcggggaccagtcatactcactgtctgaagtcgagagaaaacggatagccccggtatacgctgcatggagtgaagaagaaagaagctcctataggttcatctggtacttcgtactagataggctaggcctagggagactcccagtaccgaagaggaaaccctggaaaggcaaggaagacgacaagatgaacgacaacgcgctaatggacatgcttatgagccaaggaaaagatgccccgcacattgatgtcaatctctcgttgaaggcgacgagtcgctcacttgatgaacttctccttgagatcgacgatgacgggcacgggcatcctgatcctaaggccctcttacccagagctactagcttattgtcggggacgcagtcactattactgatagcggaagaggaaaggcgccgcgaggaagttttgctacctggcgagaagaagaggcaccataggcaccgccatcggggcgggaacaaggaggacgctacctatactggtattgacgttaagggggtggagttaaagaggcaaaagaaaaatcctccgggaccggaagcgtcgctgtctcttaggcttttatctccggcgattccaatagtccctaagaagcccatcaagcaattgctgagcgagtacggcgtcgctgacgaaaagttcgtgcgctcgatgctcgccgatttgaaggatatagacctcaatcgggtacgggcaaaggacaataccccacaagagaatcgtcgcctcaccctggaatcaatgatgcgggcactattcaacctgtgcgcgattaatgcgagtgaggaagatacgcacttgaaggaggagctggaggtagcgaagcaacggatcgcggagttcaaaggtgagttgtccgaggcgagggatgaggtgaaaagtgcccgagactccgagaaggaagctacagagtctgcgacgtcatggaaggcgagagcagaaaacctggaggaacgtcttcctgttgaaaggcaagaggccgttgcattacttattaccggaatagagtttaagcaattgtcctttacgttacttattatcggaatagagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

506

Amino Acids

57.73

Weight (kDa)

8.21

Isoelectric Point (pI)

52.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1391
AccB1I GGYRCC 4 cut(s) 159, 858, 897, 906
AccI GTMKAC 1 cut(s) 504
AccII CGCG 5 cut(s) 17, 647, 864, 1238, 1304
AciI CCGC 9 cut(s) 178, 312, 686, 845, 862, 910, 921, 1216, 1304
AclWI GGATC 2 cut(s) 773, 1307
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 1 cut(s) 228
AcuI CTGAAG 3 cut(s) 47, 86, 495
AcyI GRCGYC 3 cut(s) 859, 1092, 1388
AfaI GTAC 6 cut(s) 436, 554, 561, 594, 1088, 1158
AfiI CCNNNNNNNGG 7 cut(s) 98, 196, 614, 916, 1153, 1201, 1332
AflIII ACRYGT 1 cut(s) 378
AgsI TTSAA 6 cut(s) 712, 1135, 1228, 1270, 1312, 1436
AjnI CCWGG 4 cut(s) 608, 880, 1200, 1413
AluBI AGCT 7 cut(s) 55, 127, 534, 803, 810, 1279, 1373
AluI AGCT 7 cut(s) 55, 127, 534, 803, 810, 1279, 1373
Alw26I GTCTC 3 cut(s) 577, 1023, 1350
AlwI GGATC 2 cut(s) 773, 1307
AlwNI CAGNNNCTG 1 cut(s) 1382
Ama87I CYCGRG 1 cut(s) 1353
AoxI GGCC 6 cut(s) 59, 243, 444, 574, 786, 1446
ApeKI GCWGC 2 cut(s) 112, 509
ApoI RAATTY 1 cut(s) 228
ArsI GACNNNNNNTTYG 2 cut(s) 1091, 1123
AseI ATTAAT 1 cut(s) 1242
Asp700I GAANNNNTTC 1 cut(s) 1425
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 6 cut(s) 112, 261, 649, 861, 1116, 1238
AspS9I GGNCC 4 cut(s) 282, 454, 787, 1001
AsuC2I CCSGG 3 cut(s) 198, 500, 999
AsuHPI GGTGA 5 cut(s) 186, 328, 1189, 1328, 1354
AvaI CYCGRG 1 cut(s) 1353
AvaII GGWCC 3 cut(s) 282, 454, 1001
AvrII CCTAGG 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 783
BaeGI GKGCMC 3 cut(s) 768, 1222, 1354
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 4 cut(s) 159, 858, 897, 906
BanII GRGCYC 1 cut(s) 330
BarI GAAGNNNNNNTAC 2 cut(s) 861, 893
BauI CACGAG 2 cut(s) 116, 299
BbsI GAAGAC 2 cut(s) 630, 1418
BbvI GCAGC 2 cut(s) 99, 496
BccI CCATC 5 cut(s) 96, 235, 455, 921, 1073
BceAI ACGGC 2 cut(s) 1105, 1433
BcgI CGANNNNNNTGC 2 cut(s) 896, 930
BciT130I CCWGG 4 cut(s) 610, 882, 1202, 1415
BcnI CCSGG 3 cut(s) 198, 500, 999
BcoDI GTCTC 3 cut(s) 577, 1023, 1350
BfaI CTAG 4 cut(s) 563, 572, 578, 807
BfmI CTRYAG 3 cut(s) 164, 538, 1374
BfoI RGCGCY 2 cut(s) 113, 862
BglI GCCNNNNNGGC 1 cut(s) 918
BisI GCNGC 4 cut(s) 113, 312, 510, 862
BlnI CCTAGG 1 cut(s) 577
BlpI GCTNAGC 1 cut(s) 1079
BlsI GCNGC 4 cut(s) 114, 313, 511, 863
Bme1390I CCNGG 7 cut(s) 198, 500, 610, 882, 999, 1202, 1415
Bme18I GGWCC 3 cut(s) 282, 454, 1001
BmeT110I CYCGRG 1 cut(s) 1353
BmgT120I GGNCC 4 cut(s) 282, 454, 787, 1001
BmiI GGNNCC 8 cut(s) 161, 283, 425, 455, 860, 899, 908, 1002
BmrFI CCNGG 7 cut(s) 198, 500, 610, 882, 999, 1202, 1415
BmrI ACTGGG 1 cut(s) 584
BmsI GCATC 5 cut(s) 171, 670, 781, 1110, 1203
BmuI ACTGGG 1 cut(s) 584
BpiI GAAGAC 2 cut(s) 630, 1418
BpmI CTGGAG 4 cut(s) 93, 411, 1301, 1436
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 1079
BpuEI CTTGAG 1 cut(s) 767
BpuMI CCSGG 3 cut(s) 198, 500, 999
BsaBI GATNNNNATC 1 cut(s) 699
BsaHI GRCGYC 3 cut(s) 859, 1092, 1388
BsaJI CCNNGG 9 cut(s) 133, 155, 197, 498, 577, 608, 670, 1200, 1326
BsaWI WCCGGW 3 cut(s) 40, 1003, 1466
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 156, 186
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 196, 614, 916, 1153, 1201, 1332
Bse1I ACTGG 4 cut(s) 394, 457, 590, 952
Bse21I CCTNAGG 1 cut(s) 783
Bse8I GATNNNNATC 1 cut(s) 699
BseBI CCWGG 4 cut(s) 610, 882, 1202, 1415
BseDI CCNNGG 9 cut(s) 133, 155, 197, 498, 577, 608, 670, 1200, 1326
BseGI GGATG 5 cut(s) 49, 107, 186, 772, 1342
BseJI GATNNNNATC 1 cut(s) 699
BseLI CCNNNNNNNGG 7 cut(s) 98, 196, 614, 916, 1153, 1201, 1332
BseMII CTCAG 1 cut(s) 1070
BseNI ACTGG 4 cut(s) 394, 457, 590, 952
BseRI GAGGAG 1 cut(s) 1289
BseSI GKGCMC 3 cut(s) 768, 1222, 1354
BseXI GCAGC 2 cut(s) 99, 496
BsgI GTGCAG 1 cut(s) 98
Bsh1236I CGCG 5 cut(s) 17, 647, 864, 1238, 1304
BshFI GGCC 6 cut(s) 61, 245, 446, 576, 788, 1448
BshNI GGYRCC 4 cut(s) 159, 858, 897, 906
BsiHKCI CYCGRG 1 cut(s) 1353
BsiSI CCGG 7 cut(s) 41, 197, 500, 998, 1004, 1037, 1467
BslFI GGGAC 6 cut(s) 266, 295, 467, 835, 1014, 1037
BslI CCNNNNNNNGG 7 cut(s) 98, 196, 614, 916, 1153, 1201, 1332
BsmAI GTCTC 3 cut(s) 577, 1023, 1350
BsmFI GGGAC 6 cut(s) 266, 295, 467, 835, 1014, 1037
BsmI GAATGC 1 cut(s) 220
BsnI GGCC 6 cut(s) 61, 245, 446, 576, 788, 1448
BsoBI CYCGRG 1 cut(s) 1353
Bsp1286I GDGCHC 4 cut(s) 330, 768, 1222, 1354
Bsp143I GATC 4 cut(s) 9, 750, 778, 1299
Bsp1720I GCTNAGC 1 cut(s) 1079
Bsp68I TCGCGA 1 cut(s) 17
BspACI CCGC 9 cut(s) 178, 312, 686, 845, 862, 910, 921, 1216, 1304
BspANI GGCC 6 cut(s) 61, 245, 446, 576, 788, 1448
BspCNI CTCAG 1 cut(s) 1071
BspFNI CGCG 5 cut(s) 17, 647, 864, 1238, 1304
BspLI GGNNCC 8 cut(s) 161, 283, 425, 455, 860, 899, 908, 1002
BspPI GGATC 2 cut(s) 773, 1307
BspT107I GGYRCC 4 cut(s) 159, 858, 897, 906
BsrI ACTGG 4 cut(s) 394, 457, 590, 952
BssECI CCNNGG 9 cut(s) 133, 155, 197, 498, 577, 608, 670, 1200, 1326
BssMI GATC 4 cut(s) 9, 750, 778, 1299
BssNAI GTATAC 1 cut(s) 505
BssNI GRCGYC 3 cut(s) 859, 1092, 1388
BssSI CACGAG 2 cut(s) 116, 299
BssT1I CCWWGG 3 cut(s) 133, 577, 670
Bst1107I GTATAC 1 cut(s) 505
Bst2BI CACGAG 2 cut(s) 116, 299
Bst2UI CCWGG 4 cut(s) 610, 882, 1202, 1415
Bst4CI ACNGT 5 cut(s) 159, 168, 270, 286, 471
Bst6I CTCTTC 3 cut(s) 593, 843, 887
BstACI GRCGYC 3 cut(s) 859, 1092, 1388
BstC8I GCNNGC 2 cut(s) 1125, 1218
BstDEI CTNAG 5 cut(s) 56, 783, 1022, 1056, 1079
BstDSI CCRYGG 1 cut(s) 155
BstF5I GGATG 5 cut(s) 49, 107, 186, 772, 1342
BstFNI CGCG 5 cut(s) 17, 647, 864, 1238, 1304
BstH2I RGCGCY 2 cut(s) 113, 862
BstHHI GCGC 6 cut(s) 112, 261, 649, 861, 1116, 1238
BstKTI GATC 4 cut(s) 12, 753, 781, 1302
BstMAI GTCTC 3 cut(s) 577, 1023, 1350
BstMBI GATC 4 cut(s) 9, 750, 778, 1299
BstMWI GCNNNNNNNGC 6 cut(s) 904, 918, 1069, 1089, 1120, 1244
BstNI CCWGG 4 cut(s) 610, 882, 1202, 1415
BstNSI RCATGY 1 cut(s) 661
BstSCI CCNGG 7 cut(s) 196, 498, 608, 880, 997, 1200, 1413
BstSFI CTRYAG 3 cut(s) 164, 538, 1374
BstSLI GKGCMC 3 cut(s) 768, 1222, 1354
BstUI CGCG 5 cut(s) 17, 647, 864, 1238, 1304
BstV1I GCAGC 2 cut(s) 99, 496
BstV2I GAAGAC 2 cut(s) 630, 1418
BstZ17I GTATAC 1 cut(s) 505
Bsu36I CCTNAGG 1 cut(s) 783
BsuRI GGCC 6 cut(s) 61, 245, 446, 576, 788, 1448
BtgI CCRYGG 1 cut(s) 155
BtgZI GCGATG 1 cut(s) 32
BtsCI GGATG 5 cut(s) 49, 107, 186, 772, 1342
BtsIMutI CAGTG 1 cut(s) 467
BtuMI TCGCGA 1 cut(s) 17
Cac8I GCNNGC 2 cut(s) 1125, 1218
CaiI CAGNNNCTG 1 cut(s) 1382
CfoI GCGC 6 cut(s) 112, 261, 649, 861, 1116, 1238
Cfr13I GGNCC 4 cut(s) 282, 454, 787, 1001
CseI GACGC 4 cut(s) 832, 944, 999, 1081
Csp6I GTAC 6 cut(s) 435, 553, 560, 593, 1087, 1157
CviAII CATG 4 cut(s) 247, 513, 658, 1392
CviQI GTAC 6 cut(s) 435, 553, 560, 593, 1087, 1157
DdeI CTNAG 5 cut(s) 56, 783, 1022, 1056, 1079
DinI GGCGCC 1 cut(s) 860
DpnI GATC 4 cut(s) 11, 752, 780, 1301
DpnII GATC 4 cut(s) 9, 750, 778, 1299
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 3 cut(s) 593, 843, 887
EarI CTCTTC 3 cut(s) 593, 843, 887
Eco130I CCWWGG 3 cut(s) 133, 577, 670
Eco147I AGGCCT 2 cut(s) 61, 576
Eco24I GRGCYC 1 cut(s) 330
Eco47I GGWCC 3 cut(s) 282, 454, 1001
Eco57I CTGAAG 3 cut(s) 47, 86, 495
Eco81I CCTNAGG 1 cut(s) 783
Eco88I CYCGRG 1 cut(s) 1353
EcoO109I RGGNCCY 1 cut(s) 787
EcoRII CCWGG 4 cut(s) 608, 880, 1200, 1413
EcoT14I CCWWGG 3 cut(s) 133, 577, 670
EcoT38I GRGCYC 1 cut(s) 330
EgeI GGCGCC 1 cut(s) 860
EheI GGCGCC 1 cut(s) 860
ErhI CCWWGG 3 cut(s) 133, 577, 670
FaeI CATG 4 cut(s) 250, 516, 661, 1395
FalI AAGNNNNNCTT 4 cut(s) 39, 71, 776, 808
FaqI GGGAC 6 cut(s) 266, 295, 467, 835, 1014, 1037
FatI CATG 4 cut(s) 246, 512, 657, 1391
FauI CCCGC 3 cut(s) 693, 914, 1209
FblI GTMKAC 1 cut(s) 504
Fnu4HI GCNGC 4 cut(s) 113, 312, 510, 862
FokI GGATG 5 cut(s) 56, 114, 193, 759, 1349
FriOI GRGCYC 1 cut(s) 330
Fsp4HI GCNGC 4 cut(s) 113, 312, 510, 862
FspBI CTAG 4 cut(s) 563, 572, 578, 807
GlaI GCGC 6 cut(s) 111, 260, 648, 860, 1115, 1237
GluI GCNGC 4 cut(s) 113, 312, 510, 862
GsuI CTGGAG 4 cut(s) 93, 411, 1301, 1436
HaeII RGCGCY 2 cut(s) 113, 862
HaeIII GGCC 6 cut(s) 61, 245, 446, 576, 788, 1448
HapII CCGG 7 cut(s) 41, 197, 500, 998, 1004, 1037, 1467
HgaI GACGC 4 cut(s) 832, 944, 999, 1081
HhaI GCGC 6 cut(s) 112, 261, 649, 861, 1116, 1238
Hin1I GRCGYC 3 cut(s) 859, 1092, 1388
Hin1II CATG 4 cut(s) 250, 516, 661, 1395
Hin6I GCGC 6 cut(s) 110, 259, 647, 859, 1114, 1236
HinP1I GCGC 6 cut(s) 110, 259, 647, 859, 1114, 1236
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HinfI GANTC 8 cut(s) 88, 585, 721, 1042, 1186, 1205, 1358, 1379
HpaII CCGG 7 cut(s) 41, 197, 500, 998, 1004, 1037, 1467
HphI GGTGA 5 cut(s) 186, 328, 1189, 1328, 1354
Hpy166II GTNNAC 2 cut(s) 207, 505
Hpy188I TCNGA 7 cut(s) 66, 319, 357, 475, 1327, 1363, 1511
Hpy188III TCNNGA 5 cut(s) 16, 99, 301, 481, 776
Hpy8I GTNNAC 2 cut(s) 207, 505
Hpy99I CGWCG 6 cut(s) 721, 758, 1015, 1097, 1194, 1390
HpyAV CCTTC 7 cut(s) 61, 105, 706, 1129, 1264, 1360, 1390
HpyCH4III ACNGT 5 cut(s) 159, 168, 270, 286, 471
HpyCH4IV ACGT 8 cut(s) 290, 305, 378, 437, 957, 1388, 1423, 1496
HpyCH4V TGCA 3 cut(s) 115, 512, 1454
HpyF10VI GCNNNNNNNGC 6 cut(s) 904, 918, 1069, 1089, 1120, 1244
HpyF3I CTNAG 5 cut(s) 56, 783, 1022, 1056, 1079
HpySE526I ACGT 8 cut(s) 290, 305, 378, 437, 957, 1388, 1423, 1496
Hsp92I GRCGYC 3 cut(s) 859, 1092, 1388
Hsp92II CATG 4 cut(s) 250, 516, 661, 1395
HspAI GCGC 6 cut(s) 110, 259, 647, 859, 1114, 1236
KasI GGCGCC 1 cut(s) 858
Kzo9I GATC 4 cut(s) 9, 750, 778, 1299
LmnI GCTCC 3 cut(s) 132, 539, 1276
Lsp1109I GCAGC 2 cut(s) 99, 496
LweI GCATC 5 cut(s) 171, 670, 781, 1110, 1203
MaeI CTAG 4 cut(s) 563, 572, 578, 807
MaeII ACGT 8 cut(s) 290, 305, 378, 437, 957, 1388, 1423, 1496
MaeIII GTNAC 6 cut(s) 192, 286, 301, 334, 828, 1497
MalI GATC 4 cut(s) 11, 752, 780, 1301
MboI GATC 4 cut(s) 9, 750, 778, 1299
MboII GAAGA 9 cut(s) 533, 536, 610, 635, 860, 901, 904, 1268, 1418
MfeI CAATTG 2 cut(s) 1073, 1484
MhlI GDGCHC 4 cut(s) 330, 768, 1222, 1354
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 3 cut(s) 228, 1073, 1484
MluNI TGGCCA 1 cut(s) 245
Mly113I GGCGCC 1 cut(s) 859
MlyI GAGTC 4 cut(s) 579, 730, 1352, 1388
Mox20I TGGCCA 1 cut(s) 245
MroXI GAANNNNTTC 1 cut(s) 1425
MscI TGGCCA 1 cut(s) 245
MseI TTAA 4 cut(s) 960, 974, 1242, 1479
MslI CAYNNNNRTG 4 cut(s) 17, 341, 662, 693
Msp20I TGGCCA 1 cut(s) 245
MspI CCGG 7 cut(s) 41, 197, 500, 998, 1004, 1037, 1467
MspR9I CCNGG 7 cut(s) 198, 500, 610, 882, 999, 1202, 1415
MunI CAATTG 2 cut(s) 1073, 1484
Mva1269I GAATGC 1 cut(s) 220
MvaI CCWGG 4 cut(s) 610, 882, 1202, 1415
MvnI CGCG 5 cut(s) 17, 647, 864, 1238, 1304
MwoI GCNNNNNNNGC 6 cut(s) 904, 918, 1069, 1089, 1120, 1244
NarI GGCGCC 1 cut(s) 859
NciI CCSGG 3 cut(s) 198, 500, 999
NdeII GATC 4 cut(s) 9, 750, 778, 1299
NlaIII CATG 4 cut(s) 250, 516, 661, 1395
NlaIV GGNNCC 8 cut(s) 161, 283, 425, 455, 860, 899, 908, 1002
NmuCI GTSAC 5 cut(s) 192, 286, 301, 334, 828
NruI TCGCGA 1 cut(s) 17
NspI RCATGY 1 cut(s) 661
PceI AGGCCT 2 cut(s) 61, 576
PcsI WCGNNNNNNNCGW 3 cut(s) 330, 713, 1107
PctI GAATGC 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 1425
PfeI GAWTC 4 cut(s) 88, 1042, 1186, 1205
PflFI GACNNNGTC 1 cut(s) 826
PfoI TCCNGGA 1 cut(s) 997
PkrI GCNGC 4 cut(s) 114, 313, 511, 863
PleI GAGTC 4 cut(s) 579, 729, 1352, 1387
PluTI GGCGCC 1 cut(s) 862
PpsI GAGTC 4 cut(s) 579, 729, 1352, 1387
PshBI ATTAAT 1 cut(s) 1242
Psp6I CCWGG 4 cut(s) 608, 880, 1200, 1413
PspGI CCWGG 4 cut(s) 608, 880, 1200, 1413
PspN4I GGNNCC 8 cut(s) 161, 283, 425, 455, 860, 899, 908, 1002
PspPI GGNCC 4 cut(s) 282, 454, 787, 1001
PstNI CAGNNNCTG 1 cut(s) 1382
PsyI GACNNNGTC 1 cut(s) 826
RruI TCGCGA 1 cut(s) 17
RsaI GTAC 6 cut(s) 436, 554, 561, 594, 1088, 1158
RsaNI GTAC 6 cut(s) 435, 553, 560, 593, 1087, 1157
RseI CAYNNNNRTG 4 cut(s) 17, 341, 662, 693
SaqAI TTAA 4 cut(s) 960, 974, 1242, 1479
SatI GCNGC 4 cut(s) 113, 312, 510, 862
Sau3AI GATC 4 cut(s) 9, 750, 778, 1299
Sau96I GGNCC 4 cut(s) 282, 454, 787, 1001
SchI GAGTC 4 cut(s) 579, 730, 1352, 1388
ScrFI CCNGG 7 cut(s) 198, 500, 610, 882, 999, 1202, 1415
SduI GDGCHC 4 cut(s) 330, 768, 1222, 1354
SfaNI GCATC 5 cut(s) 171, 670, 781, 1110, 1203
SfcI CTRYAG 3 cut(s) 164, 538, 1374
SfoI GGCGCC 1 cut(s) 860
SinI GGWCC 3 cut(s) 282, 454, 1001
SmiMI CAYNNNNRTG 4 cut(s) 17, 341, 662, 693
SmlI CTYRAG 1 cut(s) 746
SmoI CTYRAG 1 cut(s) 746
Sse9I AATT 3 cut(s) 228, 1073, 1484
SseBI AGGCCT 2 cut(s) 61, 576
SsiI CCGC 9 cut(s) 178, 312, 686, 845, 862, 910, 921, 1216, 1304
SspDI GGCGCC 1 cut(s) 858
SspMI CTAG 4 cut(s) 563, 572, 578, 807
StuI AGGCCT 2 cut(s) 61, 576
StyD4I CCNGG 7 cut(s) 196, 498, 608, 880, 997, 1200, 1413
StyI CCWWGG 3 cut(s) 133, 577, 670
TaaI ACNGT 5 cut(s) 159, 168, 270, 286, 471
TaiI ACGT 8 cut(s) 293, 308, 381, 440, 960, 1391, 1426, 1499
TaqI TCGA 3 cut(s) 480, 753, 1118
TasI AATT 3 cut(s) 228, 1073, 1484
TauI GCSGC 2 cut(s) 314, 864
TfiI GAWTC 4 cut(s) 88, 1042, 1186, 1205
Tru1I TTAA 4 cut(s) 960, 974, 1242, 1479
Tru9I TTAA 4 cut(s) 960, 974, 1242, 1479
TscAI CASTG 1 cut(s) 474
TseFI GTSAC 5 cut(s) 192, 286, 301, 334, 828
TseI GCWGC 2 cut(s) 112, 509
Tsp45I GTSAC 5 cut(s) 192, 286, 301, 334, 828
TspDTI ATGAA 5 cut(s) 17, 60, 535, 650, 750
TspGWI ACGGA 2 cut(s) 505, 1312
TspRI CASTG 1 cut(s) 474
Tth111I GACNNNGTC 1 cut(s) 826
VpaK11BI GGWCC 3 cut(s) 282, 454, 1001
VspI ATTAAT 1 cut(s) 1242
XapI RAATTY 1 cut(s) 228
XceI RCATGY 1 cut(s) 661
XmaJI CCTAGG 1 cut(s) 577
XmiI GTMKAC 1 cut(s) 504
XmnI GAANNNNTTC 1 cut(s) 1425
XspI CTAG 4 cut(s) 563, 572, 578, 807
ZraI GACGTC 1 cut(s) 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.