Rmu_sc0004574.1_g000019

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004574.1
OG0000087
Physical Location & Seq
Reverse (-)
69367 .. 71057
1691 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004574.1_g000019.1.cds

Sequence Viewer

Length: 1335 bp
atgtgggacttgtgccagcaagggtggccttccataaatgagttccgcgcggtacatcgggtactgtactctaggaagcagtcttgtgcaggtacggtgacctttgccgctagggactacgagcttctagttactgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagataaaaaataagaagtggcagctgaccggaaccttccaagctatcggggaccagtcctatacgctatccgaagtagaaaggaaaaggatagcccgggtatatgccgtgtggtcagagaaagaaaggagctcttataggttcatccggcactctatactttataggctagggatagggtggctccccggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccaaggagaagatgctctgcacatcgatgtcgacctagggtcgaaaggcatgagtcggtctattgaagagacccttttggagatcaccgatgagggatacggtgaacctgaccctgacgctcctgtgacccacgccgtgcagccctccatggccgatgtcattacgatagatgacagcggaatgggaaaagtaccgacctcagtgcctatttcctctcgttccactgggagcgatgaggcgttactcactggtgagaagaagagatcccacaggcaccggcatcgaactgataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgagatcagggccgtcgccttctcttggcctgttatctcccgccgttctggtaatccccaagaagcccatcaagcagctgctgaatgaatacggggttgccgatgaaaacttcgtgcggtccatgcttggggatctcaaggatattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggtgaagtatcttcatggcgagaaggccaagctggagaatgagcgagattcattgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggaggaggtaatgaactcttgggactccgagaaaaaggctgcagagtctgccatctcatggaaggagaaggcagaccatctggaggatcgccttcccgcggagaggcacgaggccgtggatgagaagaaggatcgggaggcggcggccaagtccggtgccggtgggtctcagagtaccgatggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

444

Amino Acids

50.11

Weight (kDa)

6.64

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 80
AccB1I GGYRCC 2 cut(s) 714, 1295
AccB7I CCANNNNNTGG 2 cut(s) 424, 1197
AccI GTMKAC 1 cut(s) 471
AccII CGCG 4 cut(s) 48, 50, 1138, 1238
AclWI GGATC 4 cut(s) 699, 939, 1233, 1278
AcoI YGGCCR 4 cut(s) 591, 751, 1086, 1284
AdeI CACNNNGTG 1 cut(s) 577
AfaI GTAC 8 cut(s) 54, 63, 68, 94, 633, 746, 769, 1315
AgsI TTSAA 1 cut(s) 506
AhdI GACNNNNNGTC 1 cut(s) 478
AjnI CCWGG 2 cut(s) 762, 981
AluBI AGCT 8 cut(s) 124, 185, 223, 242, 330, 877, 1051, 1114
AluI AGCT 8 cut(s) 124, 185, 223, 242, 330, 877, 1051, 1114
Alw21I GWGCWC 1 cut(s) 332
Alw26I GTCTC 3 cut(s) 503, 1001, 1311
AlwI GGATC 4 cut(s) 699, 939, 1233, 1278
AlwNI CAGNNNCTG 2 cut(s) 880, 1187
Ama87I CYCGRG 3 cut(s) 294, 799, 1002
ApeKI GCWGC 6 cut(s) 220, 580, 874, 877, 1099, 1178
AspA2I CCTAGG 1 cut(s) 475
AspLEI GCGC 2 cut(s) 50, 1138
AspS9I GGNCC 4 cut(s) 250, 439, 809, 918
AsuC2I CCSGG 7 cut(s) 295, 296, 387, 755, 956, 1003, 1004
AsuHPI GGTGA 8 cut(s) 109, 517, 554, 704, 751, 788, 1033, 1133
AvaI CYCGRG 3 cut(s) 294, 799, 1002
AvaII GGWCC 2 cut(s) 250, 918
AvrII CCTAGG 1 cut(s) 475
BanI GGYRCC 2 cut(s) 714, 1295
BanII GRGCYC 1 cut(s) 332
BauI CACGAG 1 cut(s) 1247
Bbv12I GWGCWC 1 cut(s) 332
BbvCI CCTCAGC 1 cut(s) 1131
BbvI GCAGC 6 cut(s) 232, 592, 864, 886, 1111, 1165
BccI CCATC 8 cut(s) 400, 418, 430, 875, 1078, 1199, 1224, 1313
BceAI ACGGC 6 cut(s) 290, 560, 796, 827, 978, 1238
BcgI CGANNNNNNTGC 4 cut(s) 625, 659, 704, 738
BciT130I CCWGG 2 cut(s) 764, 983
BciVI GTATCC 1 cut(s) 530
BcnI CCSGG 7 cut(s) 295, 296, 387, 755, 956, 1003, 1004
BcoDI GTCTC 3 cut(s) 503, 1001, 1311
BfaI CTAG 6 cut(s) 72, 111, 128, 182, 368, 476
BfmI CTRYAG 1 cut(s) 1179
BfuAI ACCTGC 1 cut(s) 80
BfuI GTATCC 1 cut(s) 530
BlnI CCTAGG 1 cut(s) 475
Bme1390I CCNGG 9 cut(s) 295, 296, 387, 755, 764, 956, 983, 1003, 1004
Bme18I GGWCC 2 cut(s) 250, 918
BmeRI GACNNNNNGTC 1 cut(s) 478
BmeT110I CYCGRG 3 cut(s) 294, 799, 1002
BmgT120I GGNCC 4 cut(s) 250, 439, 809, 918
BmiI GGNNCC 5 cut(s) 232, 251, 383, 716, 1297
BmrFI CCNGG 9 cut(s) 295, 296, 387, 755, 764, 956, 983, 1003, 1004
BmrI ACTGGG 1 cut(s) 675
BmsI GCATC 4 cut(s) 403, 442, 730, 1005
BmuI ACTGGG 1 cut(s) 675
BpmI CTGGAG 2 cut(s) 1073, 1241
Bpu10I CCTNAGC 1 cut(s) 1131
BpuEI CTTGAG 2 cut(s) 920, 1136
BpuMI CCSGG 7 cut(s) 295, 296, 387, 755, 956, 1003, 1004
Bsa29I ATCGAT 1 cut(s) 465
BsaBI GATNNNNATC 1 cut(s) 1323
BsaI GGTCTC 2 cut(s) 503, 1311
BsaWI WCCGGW 2 cut(s) 227, 1292
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bse118I RCCGGY 2 cut(s) 717, 1298
Bse1I ACTGG 5 cut(s) 253, 670, 694, 754, 775
Bse8I GATNNNNATC 1 cut(s) 1323
BseBI CCWGG 2 cut(s) 764, 983
BseCI ATCGAT 1 cut(s) 465
BseGI GGATG 5 cut(s) 342, 411, 415, 763, 1264
BseJI GATNNNNATC 1 cut(s) 1323
BseMII CTCAG 4 cut(s) 654, 1071, 1122, 1322
BseNI ACTGG 5 cut(s) 253, 670, 694, 754, 775
BseRI GAGGAG 2 cut(s) 410, 1157
BseXI GCAGC 6 cut(s) 232, 592, 864, 886, 1111, 1165
BseYI CCCAGC 1 cut(s) 185
BsgI GTGCAG 3 cut(s) 108, 443, 599
Bsh1236I CGCG 4 cut(s) 48, 50, 1138, 1238
Bsh1285I CGRYCG 2 cut(s) 955, 1327
BshNI GGYRCC 2 cut(s) 714, 1295
BshVI ATCGAT 1 cut(s) 465
BsiEI CGRYCG 2 cut(s) 955, 1327
BsiHKAI GWGCWC 1 cut(s) 332
BsiHKCI CYCGRG 3 cut(s) 294, 799, 1002
BslFI GGGAC 4 cut(s) 20, 128, 263, 1175
BsmAI GTCTC 3 cut(s) 503, 1001, 1311
BsmBI CGTCTC 1 cut(s) 1001
BsmFI GGGAC 4 cut(s) 20, 128, 263, 1175
Bso31I GGTCTC 2 cut(s) 503, 1311
BsoBI CYCGRG 3 cut(s) 294, 799, 1002
Bsp1286I GDGCHC 1 cut(s) 332
Bsp143I GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
Bsp19I CCATGG 1 cut(s) 588
BspCNI CTCAG 4 cut(s) 653, 1072, 1123, 1321
BspDI ATCGAT 1 cut(s) 465
BspFNI CGCG 4 cut(s) 48, 50, 1138, 1238
BspLI GGNNCC 5 cut(s) 232, 251, 383, 716, 1297
BspMAI CTGCAG 1 cut(s) 1183
BspMI ACCTGC 1 cut(s) 80
BspPI GGATC 4 cut(s) 699, 939, 1233, 1278
BspT107I GGYRCC 2 cut(s) 714, 1295
BspTNI GGTCTC 2 cut(s) 503, 1311
BsrFI RCCGGY 2 cut(s) 717, 1298
BsrI ACTGG 5 cut(s) 253, 670, 694, 754, 775
BssAI RCCGGY 2 cut(s) 717, 1298
BssMI GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
BssSI CACGAG 1 cut(s) 1247
BssT1I CCWWGG 3 cut(s) 442, 475, 588
Bst2BI CACGAG 1 cut(s) 1247
Bst2UI CCWGG 2 cut(s) 764, 983
Bst4CI ACNGT 3 cut(s) 66, 97, 542
Bst6I CTCTTC 3 cut(s) 501, 695, 773
BstAPI GCANNNNNTGC 1 cut(s) 1187
BstC8I GCNNGC 1 cut(s) 17
BstDEI CTNAG 5 cut(s) 640, 1080, 1095, 1131, 1308
BstDSI CCRYGG 3 cut(s) 588, 1236, 1254
BstEII GGTNACC 1 cut(s) 97
BstF5I GGATG 5 cut(s) 342, 411, 415, 763, 1264
BstFNI CGCG 4 cut(s) 48, 50, 1138, 1238
BstHHI GCGC 2 cut(s) 50, 1138
BstKTI GATC 8 cut(s) 525, 707, 796, 806, 934, 1228, 1273, 1327
BstMAI GTCTC 3 cut(s) 503, 1001, 1311
BstMBI GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
BstMCI CGRYCG 2 cut(s) 955, 1327
BstMWI GCNNNNNNNGC 5 cut(s) 25, 871, 922, 1085, 1187
BstNI CCWGG 2 cut(s) 764, 983
BstNSI RCATGY 1 cut(s) 433
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 9 cut(s) 293, 294, 385, 753, 762, 954, 981, 1001, 1002
BstSFI CTRYAG 1 cut(s) 1179
BstUI CGCG 4 cut(s) 48, 50, 1138, 1238
BstV1I GCAGC 6 cut(s) 232, 592, 864, 886, 1111, 1165
BstX2I RGATCY 2 cut(s) 704, 931
BstXI CCANNNNNNTGG 1 cut(s) 770
BstYI RGATCY 2 cut(s) 704, 931
Bsu15I ATCGAT 1 cut(s) 465
BsuI GTATCC 1 cut(s) 530
BsuTUI ATCGAT 1 cut(s) 465
BtgI CCRYGG 3 cut(s) 588, 1236, 1254
BtgZI GCGATG 1 cut(s) 687
BtsCI GGATG 5 cut(s) 342, 411, 415, 763, 1264
BtsIMutI CAGTG 4 cut(s) 648, 663, 687, 747
BveI ACCTGC 1 cut(s) 80
Cac8I GCNNGC 1 cut(s) 17
CaiI CAGNNNCTG 2 cut(s) 880, 1187
CfoI GCGC 2 cut(s) 50, 1138
Cfr10I RCCGGY 2 cut(s) 717, 1298
Cfr13I GGNCC 4 cut(s) 250, 439, 809, 918
Cfr42I CCGCGG 1 cut(s) 1239
Cfr9I CCCGGG 2 cut(s) 294, 1002
ClaI ATCGAT 1 cut(s) 465
CseI GACGC 1 cut(s) 566
Csp6I GTAC 8 cut(s) 53, 62, 67, 93, 632, 745, 768, 1314
CviAII CATG 6 cut(s) 430, 490, 589, 922, 1034, 1197
CviQI GTAC 8 cut(s) 53, 62, 67, 93, 632, 745, 768, 1314
DdeI CTNAG 5 cut(s) 640, 1080, 1095, 1131, 1308
DpnI GATC 8 cut(s) 524, 706, 795, 805, 933, 1227, 1272, 1326
DpnII GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
DraIII CACNNNGTG 1 cut(s) 577
DriI GACNNNNNGTC 1 cut(s) 478
EaeI YGGCCR 4 cut(s) 591, 751, 1086, 1284
Eam1104I CTCTTC 3 cut(s) 501, 695, 773
Eam1105I GACNNNNNGTC 1 cut(s) 478
EarI CTCTTC 3 cut(s) 501, 695, 773
Ecl136II GAGCTC 1 cut(s) 330
Eco130I CCWWGG 3 cut(s) 442, 475, 588
Eco24I GRGCYC 1 cut(s) 332
Eco31I GGTCTC 2 cut(s) 503, 1311
Eco47I GGWCC 2 cut(s) 250, 918
Eco53kI GAGCTC 1 cut(s) 330
Eco88I CYCGRG 3 cut(s) 294, 799, 1002
Eco91I GGTNACC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 330
EcoO65I GGTNACC 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 762, 981
EcoT14I CCWWGG 3 cut(s) 442, 475, 588
EcoT38I GRGCYC 1 cut(s) 332
ErhI CCWWGG 3 cut(s) 442, 475, 588
Esp3I CGTCTC 1 cut(s) 1001
FaeI CATG 6 cut(s) 433, 493, 592, 925, 1037, 1200
FalI AAGNNNNNCTT 4 cut(s) 316, 348, 498, 530
FaqI GGGAC 4 cut(s) 20, 128, 263, 1175
FatI CATG 6 cut(s) 429, 489, 588, 921, 1033, 1196
FauI CCCGC 4 cut(s) 847, 1011, 1131, 1243
FblI GTMKAC 1 cut(s) 471
FokI GGATG 5 cut(s) 329, 418, 422, 770, 1271
FriOI GRGCYC 1 cut(s) 332
FspBI CTAG 6 cut(s) 72, 111, 128, 182, 368, 476
GlaI GCGC 2 cut(s) 49, 1137
GsaI CCCAGC 1 cut(s) 189
GsuI CTGGAG 2 cut(s) 1073, 1241
HgaI GACGC 1 cut(s) 566
HhaI GCGC 2 cut(s) 50, 1138
Hin1II CATG 6 cut(s) 433, 493, 592, 925, 1037, 1200
Hin6I GCGC 2 cut(s) 48, 1136
HinP1I GCGC 2 cut(s) 48, 1136
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HinfI GANTC 6 cut(s) 493, 988, 1007, 1067, 1163, 1184
HphI GGTGA 8 cut(s) 109, 517, 554, 704, 751, 788, 1033, 1133
Hpy166II GTNNAC 3 cut(s) 472, 545, 747
Hpy188I TCNGA 4 cut(s) 271, 316, 1168, 1311
Hpy188III TCNNGA 2 cut(s) 1220, 1274
Hpy8I GTNNAC 3 cut(s) 472, 545, 747
Hpy99I CGWCG 1 cut(s) 817
HpyAV CCTTC 8 cut(s) 39, 244, 828, 1036, 1195, 1201, 1241, 1261
HpyCH4III ACNGT 3 cut(s) 66, 97, 542
HpyCH4IV ACGT 1 cut(s) 743
HpyCH4V TGCA 4 cut(s) 89, 460, 580, 1181
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 871, 922, 1085, 1187
HpyF3I CTNAG 5 cut(s) 640, 1080, 1095, 1131, 1308
HpySE526I ACGT 1 cut(s) 743
Hsp92II CATG 6 cut(s) 433, 493, 592, 925, 1037, 1200
HspAI GCGC 2 cut(s) 48, 1136
KspI CCGCGG 1 cut(s) 1239
Kzo9I GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
LmnI GCTCC 5 cut(s) 327, 387, 565, 669, 1111
Lsp1109I GCAGC 6 cut(s) 232, 592, 864, 886, 1111, 1165
LweI GCATC 4 cut(s) 403, 442, 730, 1005
MaeI CTAG 6 cut(s) 72, 111, 128, 182, 368, 476
MaeII ACGT 1 cut(s) 743
MaeIII GTNAC 5 cut(s) 97, 130, 565, 681, 739
MalI GATC 8 cut(s) 524, 706, 795, 805, 933, 1227, 1272, 1326
MboI GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
MboII GAAGA 8 cut(s) 461, 518, 709, 712, 790, 799, 1022, 1276
MflI RGATCY 2 cut(s) 704, 931
MhlI GDGCHC 1 cut(s) 332
MlyI GAGTC 3 cut(s) 502, 1157, 1193
MslI CAYNNNNRTG 2 cut(s) 434, 465
MspA1I CMGCKG 5 cut(s) 223, 618, 877, 1102, 1238
MspR9I CCNGG 9 cut(s) 295, 296, 387, 755, 764, 956, 983, 1003, 1004
MvaI CCWGG 2 cut(s) 764, 983
MvnI CGCG 4 cut(s) 48, 50, 1138, 1238
MwoI GCNNNNNNNGC 5 cut(s) 25, 871, 922, 1085, 1187
NciI CCSGG 7 cut(s) 295, 296, 387, 755, 956, 1003, 1004
NcoI CCATGG 1 cut(s) 588
NdeII GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
NlaIII CATG 6 cut(s) 433, 493, 592, 925, 1037, 1200
NlaIV GGNNCC 5 cut(s) 232, 251, 383, 716, 1297
NmuCI GTSAC 3 cut(s) 97, 565, 739
NspI RCATGY 1 cut(s) 433
PcsI WCGNNNNNNNCGW 1 cut(s) 897
PfeI GAWTC 3 cut(s) 988, 1007, 1067
PflMI CCANNNNNTGG 2 cut(s) 424, 1197
Ple19I CGATCG 1 cut(s) 1327
PleI GAGTC 3 cut(s) 501, 1157, 1192
PpsI GAGTC 3 cut(s) 501, 1157, 1192
Psp124BI GAGCTC 1 cut(s) 332
Psp6I CCWGG 2 cut(s) 762, 981
PspEI GGTNACC 1 cut(s) 97
PspFI CCCAGC 1 cut(s) 185
PspGI CCWGG 2 cut(s) 762, 981
PspN4I GGNNCC 5 cut(s) 232, 251, 383, 716, 1297
PspPI GGNCC 4 cut(s) 250, 439, 809, 918
PstI CTGCAG 1 cut(s) 1183
PstNI CAGNNNCTG 2 cut(s) 880, 1187
PsuI RGATCY 2 cut(s) 704, 931
PvuI CGATCG 1 cut(s) 1327
PvuII CAGCTG 2 cut(s) 223, 877
RsaI GTAC 8 cut(s) 54, 63, 68, 94, 633, 746, 769, 1315
RsaNI GTAC 8 cut(s) 53, 62, 67, 93, 632, 745, 768, 1314
RseI CAYNNNNRTG 2 cut(s) 434, 465
SacI GAGCTC 1 cut(s) 332
SacII CCGCGG 1 cut(s) 1239
SalI GTCGAC 1 cut(s) 470
Sau3AI GATC 8 cut(s) 522, 704, 793, 803, 931, 1225, 1270, 1324
Sau96I GGNCC 4 cut(s) 250, 439, 809, 918
SchI GAGTC 3 cut(s) 502, 1157, 1193
ScrFI CCNGG 9 cut(s) 295, 296, 387, 755, 764, 956, 983, 1003, 1004
SduI GDGCHC 1 cut(s) 332
SfaNI GCATC 4 cut(s) 403, 442, 730, 1005
SfcI CTRYAG 1 cut(s) 1179
Sfr303I CCGCGG 1 cut(s) 1239
SgrBI CCGCGG 1 cut(s) 1239
SinI GGWCC 2 cut(s) 250, 918
SmaI CCCGGG 2 cut(s) 296, 1004
SmiMI CAYNNNNRTG 2 cut(s) 434, 465
SmlI CTYRAG 2 cut(s) 935, 1115
SmoI CTYRAG 2 cut(s) 935, 1115
SspMI CTAG 6 cut(s) 72, 111, 128, 182, 368, 476
SstI GAGCTC 1 cut(s) 332
StyD4I CCNGG 9 cut(s) 293, 294, 385, 753, 762, 954, 981, 1001, 1002
StyI CCWWGG 3 cut(s) 442, 475, 588
TaaI ACNGT 3 cut(s) 66, 97, 542
TaiI ACGT 1 cut(s) 746
TaqI TCGA 7 cut(s) 149, 465, 471, 482, 724, 951, 961
TaqII GACCGA 1 cut(s) 486
TatI WGTACW 1 cut(s) 66
TauI GCSGC 4 cut(s) 110, 1091, 1283, 1286
TfiI GAWTC 3 cut(s) 988, 1007, 1067
TscAI CASTG 4 cut(s) 648, 670, 694, 754
TseFI GTSAC 3 cut(s) 97, 565, 739
TseI GCWGC 6 cut(s) 220, 580, 874, 877, 1099, 1178
Tsp45I GTSAC 3 cut(s) 97, 565, 739
TspDTI ATGAA 6 cut(s) 331, 900, 918, 1022, 1059, 1166
TspMI CCCGGG 2 cut(s) 294, 1002
TspRI CASTG 4 cut(s) 648, 670, 694, 754
Van91I CCANNNNNTGG 2 cut(s) 424, 1197
VpaK11BI GGWCC 2 cut(s) 250, 918
XceI RCATGY 1 cut(s) 433
XmaI CCCGGG 2 cut(s) 294, 1002
XmaJI CCTAGG 1 cut(s) 475
XmiI GTMKAC 1 cut(s) 471
XspI CTAG 6 cut(s) 72, 111, 128, 182, 368, 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.