Rmu_sc0001155.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001155.1
OG0000087
Physical Location & Seq
Reverse (-)
13744 .. 16667
2924 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001155.1_g000006.1.cds

Sequence Viewer

Length: 1557 bp
atgcccgtcccttcttctgccaaagcatcgagaaatgggagaacgcgtgggacacgtgtagcgatcctgcagcagagggcgtttcggaagctcgagagacttggaaggtttgcagccaagagacagggagaaccgagggagaattgtgagtgcctgtggagtgagatcgaccgtctgccgaggaaaaggttagatctctctttgcctgtggattttgtctattttcttgctcggtttgcttctgctactgccaaggcagtttgttatatagcaagatttgaggttcccggtagcgtaattaggatggaatcagaagccaggggtggggatacgggatcgtcgtatcagtcttctgccaggcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagaggagaacacggggtcctcgactggggtgttctcggagagtagtggggagagcgacgagggagaaagtgagggtggatctgcggaggctccggtagtcacagtggctattcccgagggcattcctaagccgaggtacacgcttgcggacgggaccgtatgcgacgaacctgggagaagcatgacgatgaaggagatcgtagacatgcggctgaagtgggggataccggatgcagtagagcttaggccacttagggatggggagatggccgcgaatcctgccccggggtgggtggcactgcacgagaatcagctccaccaagggttatcactacccctaccccggtgtctacagtatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgccgttcgccaaatatatagtatgatggctatgtgggacctgtgccagcaagggtggccttccataaatgcgttccgcgcgtcctatacgctatccgaagaggaaaagaagaggatagcccgggtatatgccgtgcggtcggagaaagagaggagctcttatagattcatccggcactctatactctttaggctaggattagggtggctccccgcactctttaatgtgtacgccatcgacgccagcgaggaggacactcatctgaaggaggaggttagcaatctctccaggcaggtgaagtacctacatggcgagaaggccaagctggagaaggagcgggactcgttgagggctgagatggccgcctctaagcagcggattacggagcttgagggcgaggttgctgaggcgcgggaggaggtaaagaatgcccgggactccgagaagaatgctgcagagtctgccgtctcatggaaggagaaagcagactctctggaggatcgcctacccgcggagaggcacgaggccttggaggagtacaagtcctcagatgagcttatctccatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtatctagataaggccaaattcaggcggggtctcctggccaaattcaggcgggcaagtctggtgccggtgggtctcagagcttttgtgaattggaacatccttgatttgaatggaaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

518

Amino Acids

58.21

Weight (kDa)

7.59

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1093
Acc36I ACCTGC 1 cut(s) 1093
Acc65I GGTACC 1 cut(s) 384
AccB1I GGYRCC 2 cut(s) 384, 1498
AccBSI CCGCTC 1 cut(s) 1147
AccI GTMKAC 3 cut(s) 399, 609, 757
AccII CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
AclWI GGATC 4 cut(s) 58, 343, 493, 1317
AcoI YGGCCR 4 cut(s) 675, 1170, 1431, 1473
AcsI RAATTY 2 cut(s) 1454, 1478
AcuI CTGAAG 3 cut(s) 387, 641, 1094
AcvI CACGTG 1 cut(s) 56
AcyI GRCGYC 1 cut(s) 1050
AfaI GTAC 5 cut(s) 386, 545, 1040, 1112, 1349
AflIII ACRYGT 3 cut(s) 44, 53, 55
AgeI ACCGGT 1 cut(s) 381
AgsI TTSAA 1 cut(s) 1546
AjnI CCWGG 5 cut(s) 317, 356, 577, 1097, 1470
AloI GAACNNNNNNTCC 2 cut(s) 407, 439
Alw21I GWGCWC 1 cut(s) 968
Alw26I GTCTC 5 cut(s) 91, 115, 1282, 1472, 1514
AlwI GGATC 4 cut(s) 58, 343, 493, 1317
AlwNI CAGNNNCTG 2 cut(s) 766, 1271
Ama87I CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
ApeKI GCWGC 8 cut(s) 70, 113, 769, 796, 1183, 1262, 1382, 1385
ApoI RAATTY 2 cut(s) 1454, 1478
AsiGI ACCGGT 1 cut(s) 381
Asp718I GGTACC 1 cut(s) 384
AspA2I CCTAGG 1 cut(s) 388
AspLEI GCGC 2 cut(s) 890, 1222
AspS9I GGNCC 3 cut(s) 423, 561, 847
AsuHPI GGTGA 2 cut(s) 780, 1117
AvaI CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
AvaII GGWCC 3 cut(s) 423, 561, 847
AvrII CCTAGG 1 cut(s) 388
BalI TGGCCA 1 cut(s) 1475
BanI GGYRCC 2 cut(s) 384, 1498
BanII GRGCYC 1 cut(s) 968
BauI CACGAG 2 cut(s) 710, 1331
BbrPI CACGTG 1 cut(s) 56
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 968
BbvCI CCTCAGC 1 cut(s) 1215
BbvI GCAGC 8 cut(s) 82, 125, 756, 808, 1195, 1249, 1369, 1372
BccI CCATC 6 cut(s) 298, 659, 667, 829, 1052, 1162
BceAI ACGGC 3 cut(s) 797, 926, 1259
BcgI CGANNNNNNTGC 2 cut(s) 1241, 1275
BciT130I CCWGG 5 cut(s) 319, 358, 579, 1099, 1472
BciVI GTATCC 2 cut(s) 322, 624
BcoDI GTCTC 5 cut(s) 91, 115, 1282, 1472, 1514
BfaI CTAG 3 cut(s) 389, 1004, 1442
BfmI CTRYAG 3 cut(s) 68, 758, 1263
BfuAI ACCTGC 1 cut(s) 1093
BfuI GTATCC 2 cut(s) 322, 624
BglII AGATCT 1 cut(s) 193
BlnI CCTAGG 1 cut(s) 388
Bme18I GGWCC 3 cut(s) 423, 561, 847
BmeT110I CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
BmgT120I GGNCC 3 cut(s) 423, 561, 847
BmiI GGNNCC 8 cut(s) 285, 386, 424, 498, 562, 848, 1019, 1500
BmrI ACTGGG 1 cut(s) 441
BmsI GCATC 3 cut(s) 35, 628, 765
BmuI ACTGGG 1 cut(s) 441
BpiI GAAGAC 1 cut(s) 342
BplI GAGNNNNNCTC 6 cut(s) 950, 982, 1136, 1168, 1355, 1387
BpmI CTGGAG 3 cut(s) 1081, 1157, 1325
Bpu10I CCTNAGC 3 cut(s) 534, 650, 1215
BpuEI CTTGAG 1 cut(s) 1220
BsaAI YACGTR 1 cut(s) 56
BsaHI GRCGYC 1 cut(s) 1050
BsaI GGTCTC 2 cut(s) 1472, 1514
BsaWI WCCGGW 3 cut(s) 381, 499, 634
BsaXI ACNNNNNCTCC 4 cut(s) 31, 61, 1337, 1367
Bse118I RCCGGY 2 cut(s) 381, 1501
Bse1I ACTGG 1 cut(s) 436
BseBI CCWGG 5 cut(s) 319, 358, 579, 1099, 1472
BseGI GGATG 6 cut(s) 309, 643, 670, 780, 978, 1533
BseMII CTCAG 4 cut(s) 1155, 1206, 1371, 1525
BseNI ACTGG 1 cut(s) 436
BseRI GAGGAG 6 cut(s) 425, 976, 1073, 1094, 1241, 1358
BseX3I CGGCCG 1 cut(s) 1431
BseXI GCAGC 8 cut(s) 82, 125, 756, 808, 1195, 1249, 1369, 1372
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
Bsh1285I CGRYCG 4 cut(s) 172, 382, 950, 1434
BshNI GGYRCC 2 cut(s) 384, 1498
BshTI ACCGGT 1 cut(s) 381
BsiEI CGRYCG 4 cut(s) 172, 382, 950, 1434
BsiHKAI GWGCWC 1 cut(s) 968
BsiHKCI CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
BslFI GGGAC 5 cut(s) 64, 574, 860, 1163, 1259
BsmAI GTCTC 5 cut(s) 91, 115, 1282, 1472, 1514
BsmBI CGTCTC 1 cut(s) 1282
BsmFI GGGAC 5 cut(s) 64, 574, 860, 1163, 1259
BsmI GAATGC 4 cut(s) 528, 814, 1243, 1264
Bso31I GGTCTC 2 cut(s) 1472, 1514
BsoBI CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
Bsp1286I GDGCHC 1 cut(s) 968
Bsp143I GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
BspCNI CTCAG 4 cut(s) 1156, 1207, 1370, 1524
BspFNI CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
BspHI TCATGA 1 cut(s) 1407
BspLI GGNNCC 8 cut(s) 285, 386, 424, 498, 562, 848, 1019, 1500
BspMAI CTGCAG 2 cut(s) 72, 1267
BspMI ACCTGC 1 cut(s) 1093
BspPI GGATC 4 cut(s) 58, 343, 493, 1317
BspT107I GGYRCC 2 cut(s) 384, 1498
BspTNI GGTCTC 2 cut(s) 1472, 1514
BsrBI CCGCTC 1 cut(s) 1147
BsrFI RCCGGY 2 cut(s) 381, 1501
BsrI ACTGG 1 cut(s) 436
BssAI RCCGGY 2 cut(s) 381, 1501
BssMI GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
BssNI GRCGYC 1 cut(s) 1050
BssSI CACGAG 2 cut(s) 710, 1331
BssT1I CCWWGG 4 cut(s) 252, 388, 727, 1338
Bst2BI CACGAG 2 cut(s) 710, 1331
Bst2UI CCWGG 5 cut(s) 319, 358, 579, 1099, 1472
Bst4CI ACNGT 4 cut(s) 173, 511, 565, 762
Bst6I CTCTTC 2 cut(s) 903, 914
BstACI GRCGYC 1 cut(s) 1050
BstAPI GCANNNNNTGC 1 cut(s) 1271
BstBAI YACGTR 1 cut(s) 56
BstC8I GCNNGC 6 cut(s) 363, 552, 857, 1054, 1380, 1488
BstDEI CTNAG 8 cut(s) 534, 650, 659, 1164, 1179, 1215, 1357, 1511
BstDSI CCRYGG 1 cut(s) 1320
BstF5I GGATG 6 cut(s) 309, 643, 670, 780, 978, 1533
BstFNI CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
BstHHI GCGC 2 cut(s) 890, 1222
BstKTI GATC 7 cut(s) 66, 168, 196, 338, 488, 606, 1312
BstMAI GTCTC 5 cut(s) 91, 115, 1282, 1472, 1514
BstMBI GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
BstMCI CGRYCG 4 cut(s) 172, 382, 950, 1434
BstMWI GCNNNNNNNGC 9 cut(s) 236, 362, 686, 775, 865, 887, 1049, 1169, 1271
BstNI CCWGG 5 cut(s) 319, 358, 579, 1099, 1472
BstNSI RCATGY 1 cut(s) 616
BstSFI CTRYAG 3 cut(s) 68, 758, 1263
BstUI CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
BstV1I GCAGC 8 cut(s) 82, 125, 756, 808, 1195, 1249, 1369, 1372
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 2 cut(s) 193, 485
BstYI RGATCY 2 cut(s) 193, 485
BstZI CGGCCG 1 cut(s) 1431
BsuI GTATCC 2 cut(s) 322, 624
BtgI CCRYGG 1 cut(s) 1320
BtsCI GGATG 6 cut(s) 309, 643, 670, 780, 978, 1533
BtsI GCAGTG 1 cut(s) 704
BtsIMutI CAGTG 2 cut(s) 516, 704
BveI ACCTGC 1 cut(s) 1093
Cac8I GCNNGC 6 cut(s) 363, 552, 857, 1054, 1380, 1488
CaiI CAGNNNCTG 2 cut(s) 766, 1271
CciI TCATGA 1 cut(s) 1407
CfoI GCGC 2 cut(s) 890, 1222
Cfr10I RCCGGY 2 cut(s) 381, 1501
Cfr13I GGNCC 3 cut(s) 423, 561, 847
Cfr42I CCGCGG 1 cut(s) 1323
Cfr9I CCCGGG 3 cut(s) 691, 930, 1242
CseI GACGC 2 cut(s) 879, 1058
Csp6I GTAC 5 cut(s) 385, 544, 1039, 1111, 1348
CspAI ACCGGT 1 cut(s) 381
CviAII CATG 6 cut(s) 589, 613, 1118, 1281, 1375, 1408
CviQI GTAC 5 cut(s) 385, 544, 1039, 1111, 1348
DdeI CTNAG 8 cut(s) 534, 650, 659, 1164, 1179, 1215, 1357, 1511
DpnI GATC 7 cut(s) 65, 167, 195, 337, 487, 605, 1311
DpnII GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
EaeI YGGCCR 4 cut(s) 675, 1170, 1431, 1473
EagI CGGCCG 1 cut(s) 1431
Eam1104I CTCTTC 2 cut(s) 903, 914
EarI CTCTTC 2 cut(s) 903, 914
Ecl136II GAGCTC 1 cut(s) 966
EclXI CGGCCG 1 cut(s) 1431
Eco130I CCWWGG 4 cut(s) 252, 388, 727, 1338
Eco147I AGGCCT 1 cut(s) 1337
Eco24I GRGCYC 1 cut(s) 968
Eco31I GGTCTC 2 cut(s) 1472, 1514
Eco47I GGWCC 3 cut(s) 423, 561, 847
Eco52I CGGCCG 1 cut(s) 1431
Eco53kI GAGCTC 1 cut(s) 966
Eco57I CTGAAG 3 cut(s) 387, 641, 1094
Eco72I CACGTG 1 cut(s) 56
Eco88I CYCGRG 5 cut(s) 92, 521, 691, 930, 1242
EcoICRI GAGCTC 1 cut(s) 966
EcoO109I RGGNCCY 2 cut(s) 423, 847
EcoRII CCWGG 5 cut(s) 317, 356, 577, 1097, 1470
EcoT14I CCWWGG 4 cut(s) 252, 388, 727, 1338
EcoT38I GRGCYC 1 cut(s) 968
ErhI CCWWGG 4 cut(s) 252, 388, 727, 1338
Esp3I CGTCTC 1 cut(s) 1282
FaeI CATG 6 cut(s) 592, 616, 1121, 1284, 1378, 1411
FaqI GGGAC 5 cut(s) 64, 574, 860, 1163, 1259
FatI CATG 6 cut(s) 588, 612, 1117, 1280, 1374, 1407
FauI CCCGC 6 cut(s) 1030, 1140, 1215, 1327, 1455, 1479
FblI GTMKAC 3 cut(s) 399, 609, 757
FokI GGATG 6 cut(s) 316, 650, 677, 787, 965, 1520
FriOI GRGCYC 1 cut(s) 968
FspBI CTAG 3 cut(s) 389, 1004, 1442
GlaI GCGC 2 cut(s) 889, 1221
GsuI CTGGAG 3 cut(s) 1081, 1157, 1325
HgaI GACGC 2 cut(s) 879, 1058
HhaI GCGC 2 cut(s) 890, 1222
Hin1I GRCGYC 1 cut(s) 1050
Hin1II CATG 6 cut(s) 592, 616, 1121, 1284, 1378, 1411
Hin6I GCGC 2 cut(s) 888, 1220
HinP1I GCGC 2 cut(s) 888, 1220
HinfI GANTC 8 cut(s) 308, 682, 715, 975, 1151, 1247, 1268, 1298
HphI GGTGA 2 cut(s) 780, 1117
Hpy166II GTNNAC 6 cut(s) 373, 400, 546, 610, 758, 1039
Hpy188I TCNGA 9 cut(s) 87, 313, 445, 907, 952, 1074, 1252, 1360, 1514
Hpy188III TCNNGA 6 cut(s) 30, 94, 521, 1304, 1408, 1442
Hpy8I GTNNAC 6 cut(s) 373, 400, 546, 610, 758, 1039
Hpy99I CGWCG 4 cut(s) 343, 467, 575, 1052
HpyAV CCTTC 8 cut(s) 21, 99, 592, 879, 1069, 1120, 1135, 1279
HpyCH4III ACNGT 4 cut(s) 173, 511, 565, 762
HpyCH4IV ACGT 1 cut(s) 55
HpyCH4V TGCA 5 cut(s) 70, 113, 641, 709, 1265
HpyF10VI GCNNNNNNNGC 9 cut(s) 236, 362, 686, 775, 865, 887, 1049, 1169, 1271
HpyF3I CTNAG 8 cut(s) 534, 650, 659, 1164, 1179, 1215, 1357, 1511
HpySE526I ACGT 1 cut(s) 55
Hsp92I GRCGYC 1 cut(s) 1050
Hsp92II CATG 6 cut(s) 592, 616, 1121, 1284, 1378, 1411
HspAI GCGC 2 cut(s) 888, 1220
KpnI GGTACC 1 cut(s) 388
KspI CCGCGG 1 cut(s) 1323
Kzo9I GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
LmnI GCTCC 6 cut(s) 502, 726, 963, 1023, 1144, 1195
Lsp1109I GCAGC 8 cut(s) 82, 125, 756, 808, 1195, 1249, 1369, 1372
LweI GCATC 3 cut(s) 35, 628, 765
MaeI CTAG 3 cut(s) 389, 1004, 1442
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 2 cut(s) 505, 786
MalI GATC 7 cut(s) 65, 167, 195, 337, 487, 605, 1311
MbiI CCGCTC 1 cut(s) 1147
MboI GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
MboII GAAGA 5 cut(s) 6, 342, 920, 931, 1267
MflI RGATCY 2 cut(s) 193, 485
MhlI GDGCHC 1 cut(s) 968
MlsI TGGCCA 1 cut(s) 1475
MluCI AATT 7 cut(s) 142, 297, 404, 1454, 1478, 1525, 1552
MluI ACGCGT 1 cut(s) 44
MluNI TGGCCA 1 cut(s) 1475
MlyI GAGTC 4 cut(s) 1145, 1241, 1277, 1292
MmeI TCCRAC 1 cut(s) 930
Mox20I TGGCCA 1 cut(s) 1475
MscI TGGCCA 1 cut(s) 1475
MseI TTAA 2 cut(s) 1032, 1416
MslI CAYNNNNRTG 1 cut(s) 593
Msp20I TGGCCA 1 cut(s) 1475
MspA1I CMGCKG 3 cut(s) 799, 1186, 1322
Mva1269I GAATGC 4 cut(s) 528, 814, 1243, 1264
MvaI CCWGG 5 cut(s) 319, 358, 579, 1099, 1472
MvnI CGCG 6 cut(s) 46, 680, 888, 890, 1222, 1322
MwoI GCNNNNNNNGC 9 cut(s) 236, 362, 686, 775, 865, 887, 1049, 1169, 1271
NdeII GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
NlaIII CATG 6 cut(s) 592, 616, 1121, 1284, 1378, 1411
NlaIV GGNNCC 8 cut(s) 285, 386, 424, 498, 562, 848, 1019, 1500
NmeAIII GCCGAG 2 cut(s) 204, 564
NmuCI GTSAC 2 cut(s) 505, 786
NspI RCATGY 1 cut(s) 616
PaeR7I CTCGAG 1 cut(s) 92
PagI TCATGA 1 cut(s) 1407
PaqCI CACCTGC 1 cut(s) 1093
PceI AGGCCT 1 cut(s) 1337
PcsI WCGNNNNNNNCGW 3 cut(s) 338, 425, 1053
PctI GAATGC 4 cut(s) 528, 814, 1243, 1264
PfeI GAWTC 4 cut(s) 308, 682, 715, 975
PinAI ACCGGT 1 cut(s) 381
PleI GAGTC 4 cut(s) 1145, 1241, 1276, 1292
PmaCI CACGTG 1 cut(s) 56
PmlI CACGTG 1 cut(s) 56
PpsI GAGTC 4 cut(s) 1145, 1241, 1276, 1292
Ppu21I YACGTR 1 cut(s) 56
PpuMI RGGWCCY 2 cut(s) 423, 847
Psp124BI GAGCTC 1 cut(s) 968
Psp5II RGGWCCY 2 cut(s) 423, 847
Psp6I CCWGG 5 cut(s) 317, 356, 577, 1097, 1470
PspCI CACGTG 1 cut(s) 56
PspGI CCWGG 5 cut(s) 317, 356, 577, 1097, 1470
PspN4I GGNNCC 8 cut(s) 285, 386, 424, 498, 562, 848, 1019, 1500
PspPI GGNCC 3 cut(s) 423, 561, 847
PspPPI RGGWCCY 2 cut(s) 423, 847
PstI CTGCAG 2 cut(s) 72, 1267
PstNI CAGNNNCTG 2 cut(s) 766, 1271
PsuI RGATCY 2 cut(s) 193, 485
PvuII CAGCTG 1 cut(s) 799
RsaI GTAC 5 cut(s) 386, 545, 1040, 1112, 1349
RsaNI GTAC 5 cut(s) 385, 544, 1039, 1111, 1348
RseI CAYNNNNRTG 1 cut(s) 593
SacI GAGCTC 1 cut(s) 968
SacII CCGCGG 1 cut(s) 1323
SaqAI TTAA 2 cut(s) 1032, 1416
Sau3AI GATC 7 cut(s) 63, 165, 193, 335, 485, 603, 1309
Sau96I GGNCC 3 cut(s) 423, 561, 847
SchI GAGTC 4 cut(s) 1145, 1241, 1277, 1292
SduI GDGCHC 1 cut(s) 968
SfaNI GCATC 3 cut(s) 35, 628, 765
SfcI CTRYAG 3 cut(s) 68, 758, 1263
Sfr274I CTCGAG 1 cut(s) 92
Sfr303I CCGCGG 1 cut(s) 1323
SgrBI CCGCGG 1 cut(s) 1323
SinI GGWCC 3 cut(s) 423, 561, 847
SlaI CTCGAG 1 cut(s) 92
SmaI CCCGGG 3 cut(s) 693, 932, 1244
SmiMI CAYNNNNRTG 1 cut(s) 593
SmlI CTYRAG 2 cut(s) 92, 1199
SmoI CTYRAG 2 cut(s) 92, 1199
Sse9I AATT 7 cut(s) 142, 297, 404, 1454, 1478, 1525, 1552
SseBI AGGCCT 1 cut(s) 1337
SspMI CTAG 3 cut(s) 389, 1004, 1442
SstI GAGCTC 1 cut(s) 968
StuI AGGCCT 1 cut(s) 1337
StyI CCWWGG 4 cut(s) 252, 388, 727, 1338
TaaI ACNGT 4 cut(s) 173, 511, 565, 762
TaiI ACGT 1 cut(s) 58
TaqI TCGA 6 cut(s) 29, 93, 168, 378, 428, 1047
TasI AATT 7 cut(s) 142, 297, 404, 1454, 1478, 1525, 1552
TatI WGTACW 1 cut(s) 1347
TauI GCSGC 4 cut(s) 619, 680, 1175, 1433
TfiI GAWTC 4 cut(s) 308, 682, 715, 975
Tru1I TTAA 2 cut(s) 1032, 1416
Tru9I TTAA 2 cut(s) 1032, 1416
TscAI CASTG 2 cut(s) 516, 711
TseFI GTSAC 2 cut(s) 505, 786
TseI GCWGC 8 cut(s) 70, 113, 769, 796, 1183, 1262, 1382, 1385
Tsp45I GTSAC 2 cut(s) 505, 786
TspDTI ATGAA 3 cut(s) 611, 967, 1424
TspGWI ACGGA 1 cut(s) 1208
TspMI CCCGGG 3 cut(s) 691, 930, 1242
TspRI CASTG 2 cut(s) 516, 711
VpaK11BI GGWCC 3 cut(s) 423, 561, 847
XapI RAATTY 2 cut(s) 1454, 1478
XbaI TCTAGA 1 cut(s) 1441
XceI RCATGY 1 cut(s) 616
XhoI CTCGAG 1 cut(s) 92
XmaI CCCGGG 3 cut(s) 691, 930, 1242
XmaJI CCTAGG 1 cut(s) 388
XmiI GTMKAC 3 cut(s) 399, 609, 757
XspI CTAG 3 cut(s) 389, 1004, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.