Rmu_sc0002804.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002804.1
OG0000087
Physical Location & Seq
Forward (+)
57881 .. 61488
3608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002804.1_g000013.1.cds

Sequence Viewer

Length: 2358 bp
atggtacagacagctattccaggtcgggccactgaggtggagaggctgaaacgttgccagatttggtcacccagcggtgatgaagcttctggtgagtcaccgagagaaaaacgttgccggagagacatggatgcttggaggaatgaggcaaagttgtgcttgagtgagggatcgccgggactccagaagaataccaggagtaagaccagctggaaattaatcgatgttaccggtaccataatgaaagtcactgagaggttgggtcgccacctagatggttcacaaggaagaggtgacgaggaaggtggtgccgggaggttgggtaccagctttgatagatatgggtaccagtggagactcaatcaagaagagttgaatttaagagggaaaacctttgttcttcgttatcattctgtgaatactgtgagaaagctctgcccaaatttgcgttgttttggggggggggagccatcgcatcaagcctctgagaagcaggcagagcaggcgatagatgcctatctcgcccaaagcggtactcgcggtgggtatcgggatgaggagaccgcttcatcgtccgcggtggtatctgtgagttccgagagtgaagaggttagtgggagcaaggagggtctagggttggacgacgaggtttccgttgcaattctgtcaagggtgctagtgcgtaggtataccttggtggatggaacgggcatactggaccaagtagaccttaggcctctaggaccggacgagttggcatgtaatccgcctatgggatgggtagcgctatacaagaaccagctgtatagcgctgccgaagccagtttagtacatattaaggatgctgagcttgtcaccggggcaattgaccctgaaagcttggaggcaacttttcagtatgctggcaatgtaggacttgtgcgactgcttgttgccgatctaccgacttcccaaagtaagaagtggaagaacaaagtattcctcgctgggggtaggtggcagatcaagaataggaaatggcaggtgcctggaacttatcaagccatcggggaccagtcttatgtactgtcagatgtggagaagaagcgtattgcaagggtatacaccgtatggggtgacgtggaaggaaggagttcttacagattcatccggtactctatattggataggttgggcttaggaagagtacccgttaaagtaccgaagaggaagctaaggaaatgcaaggaagaagacagaatggacgacttgacgctgatggatagactgatgaaccagggaaacgaggccatacggatcgacgtggacctggagggcaagacgacccggaccaccattgaggatatcctactggagataccggatgagggttatggggaaccggacgccaatgcccaaattgtgaggcgggaggcttctgggctcgaaggtgtgcttaccctggtggacctggaagggggcaagggaaaagggaccgggtcccaggcttctctttcaaacgggtccctaggtagcgaagaagcgcttctgcccggggagaagaggaaaagggttcatcgccatcgccacagcagtgggacgaatgtggaggtgacgtacactggcctggatgtgaagggagactccaagaagtccaagaagagtcatcaggcccctccggagtcgacccagtcgcttgggctgctatctccggtgctgccggttgtccctaagaaaccgatcaaccagctgctctccgagtatggtgtggaggctagcaagggagttgatgatgcggtgcaagcgctatacaacatttacgccttcgatgccagcgaggaggatacccacttgaaggaggaagtgagcagcctctccgggcaagtgaagtatctccatggggagaaggccaagttggagaaagagcgggactccttgaaggggaaggtggagtccttgactcccaaggtggccaaactggaggtggtggagaaaaagatcgcggggcttgagcgggaactctctggggcaagggatgagttactgagagcccgagactctgagaaagaagttgcggagtctgccaagtcatggaaggcaaaggtagagcagttagaggagggattttccatccaaaggcaagaggtagttgccgaatacaaaggctcccaagagctcattgatatgttgctcgccactcaggacaaggccgtgattattaagtacaaagagtgggtggcagcctggtacctggatgaagccaagtttaggtgggggcttgttgaaaaaaagaaagatcaggaggctaagaggagagaacaaggaagccagagtgtcggacccgaggaaggggcaagtggtggtcaacccgctgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

785

Amino Acids

86.86

Weight (kDa)

6.64

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1012
Acc36I ACCTGC 1 cut(s) 1012
Acc65I GGTACC 4 cut(s) 233, 323, 345, 2226
AccB1I GGYRCC 6 cut(s) 233, 308, 323, 345, 1024, 2226
AccB7I CCANNNNNTGG 1 cut(s) 2070
AccBSI CCGCTC 2 cut(s) 1906, 1993
AccI GTMKAC 4 cut(s) 689, 726, 1101, 1664
AccII CGCG 3 cut(s) 540, 578, 1982
AccIII TCCGGA 1 cut(s) 1657
AclI AACGTT 2 cut(s) 52, 112
AclWI GGATC 2 cut(s) 178, 1304
AcoI YGGCCR 1 cut(s) 1950
AcsI RAATTY 2 cut(s) 376, 442
AcyI GRCGYC 1 cut(s) 1386
AfeI AGCGCT 4 cut(s) 786, 811, 1524, 1785
AgeI ACCGGT 1 cut(s) 230
AgsI TTSAA 5 cut(s) 376, 1497, 1834, 1918, 2264
AjiI CACGTC 2 cut(s) 1120, 1303
AjuI GAANNNNNNNTTGG 2 cut(s) 1877, 1909
AleI CACNNNNGTG 2 cut(s) 35, 1572
Alw21I GWGCWC 1 cut(s) 2157
Alw26I GTCTC 5 cut(s) 117, 349, 554, 1614, 2028
AlwI GGATC 2 cut(s) 178, 1304
Ama87I CYCGRG 3 cut(s) 1532, 2031, 2321
Aor13HI TCCGGA 1 cut(s) 1657
Aor51HI AGCGCT 4 cut(s) 786, 811, 1524, 1785
AoxI GGCC 8 cut(s) 27, 734, 1287, 1603, 1650, 1887, 1950, 2187
ApeKI GCWGC 7 cut(s) 812, 1681, 1696, 1729, 1848, 2219, 2351
ApoI RAATTY 2 cut(s) 376, 442
AseI ATTAAT 1 cut(s) 218
AsiGI ACCGGT 1 cut(s) 230
Asp700I GAANNNNTTC 2 cut(s) 1132, 1524
Asp718I GGTACC 4 cut(s) 233, 323, 345, 2226
AspA2I CCTAGG 1 cut(s) 1507
AspLEI GCGC 4 cut(s) 787, 812, 1525, 1786
AsuC2I CCSGG 8 cut(s) 177, 313, 859, 1327, 1477, 1533, 1534, 1858
AsuHPI GGTGA 8 cut(s) 60, 89, 90, 104, 305, 847, 1127, 1603
AsuNHI GCTAGC 1 cut(s) 1754
AvaI CYCGRG 3 cut(s) 1532, 2031, 2321
AvrII CCTAGG 1 cut(s) 1507
AxyI CCTNAGG 1 cut(s) 731
BalI TGGCCA 1 cut(s) 1952
BanI GGYRCC 6 cut(s) 233, 308, 323, 345, 1024, 2226
BanII GRGCYC 3 cut(s) 1425, 2032, 2157
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 2157
BbvI GCAGC 7 cut(s) 799, 1668, 1683, 1716, 1860, 2231, 2338
BccI CCATC 8 cut(s) 269, 478, 695, 771, 1052, 1252, 1569, 2117
BceAI ACGGC 1 cut(s) 2174
BciVI GTATCC 1 cut(s) 1816
BcnI CCSGG 8 cut(s) 177, 313, 859, 1327, 1477, 1533, 1534, 1858
BcoDI GTCTC 5 cut(s) 117, 349, 554, 1614, 2028
BfaI CTAG 6 cut(s) 272, 632, 677, 740, 1508, 1755
BfoI RGCGCY 4 cut(s) 788, 813, 1526, 1787
BfuAI ACCTGC 1 cut(s) 1012
BfuI GTATCC 1 cut(s) 1816
BisI GCNGC 7 cut(s) 813, 1682, 1697, 1730, 1849, 2220, 2352
BlnI CCTAGG 1 cut(s) 1507
BlpI GCTNAGC 1 cut(s) 846
BlsI GCNGC 7 cut(s) 814, 1683, 1698, 1731, 1850, 2221, 2353
BmeT110I CYCGRG 3 cut(s) 1532, 2031, 2321
BmgBI CACGTC 2 cut(s) 1120, 1303
BmrI ACTGGG 1 cut(s) 1663
BmsI GCATC 6 cut(s) 121, 484, 502, 832, 1762, 1798
BmtI GCTAGC 1 cut(s) 1758
BmuI ACTGGG 1 cut(s) 1663
BpiI GAAGAC 1 cut(s) 1239
BplI GAGNNNNNCTC 2 cut(s) 1895, 1927
BpmI CTGGAG 4 cut(s) 167, 1331, 1373, 1979
Bpu10I CCTNAGC 2 cut(s) 1177, 1214
Bpu1102I GCTNAGC 1 cut(s) 846
BpuEI CTTGAG 2 cut(s) 181, 2009
BpuMI CCSGG 8 cut(s) 177, 313, 859, 1327, 1477, 1533, 1534, 1858
Bsa29I ATCGAT 1 cut(s) 222
BsaBI GATNNNNATC 1 cut(s) 516
BsaHI GRCGYC 1 cut(s) 1386
BsaI GGTCTC 1 cut(s) 554
BsaWI WCCGGW 7 cut(s) 230, 745, 1149, 1360, 1381, 1657, 1690
BsaXI ACNNNNNCTCC 6 cut(s) 307, 337, 1580, 1610, 2129, 2159
Bse118I RCCGGY 2 cut(s) 230, 1699
Bse1I ACTGG 8 cut(s) 349, 720, 822, 1054, 1356, 1606, 1669, 1962
Bse21I CCTNAGG 1 cut(s) 731
Bse3DI GCAATG 1 cut(s) 913
Bse8I GATNNNNATC 1 cut(s) 516
BseAI TCCGGA 1 cut(s) 1657
BseCI ATCGAT 1 cut(s) 222
BseJI GATNNNNATC 1 cut(s) 516
BseMI GCAATG 1 cut(s) 913
BseMII CTCAG 7 cut(s) 24, 243, 477, 837, 2015, 2031, 2192
BseNI ACTGG 8 cut(s) 349, 720, 822, 1054, 1356, 1606, 1669, 1962
BseRI GAGGAG 4 cut(s) 572, 1832, 2111, 2305
BseXI GCAGC 7 cut(s) 799, 1668, 1683, 1716, 1860, 2231, 2338
BseYI CCCAGC 2 cut(s) 71, 986
Bsh1236I CGCG 3 cut(s) 540, 578, 1982
BshFI GGCC 8 cut(s) 29, 736, 1289, 1605, 1652, 1889, 1952, 2189
BshNI GGYRCC 6 cut(s) 233, 308, 323, 345, 1024, 2226
BshTI ACCGGT 1 cut(s) 230
BshVI ATCGAT 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 2157
BsiHKCI CYCGRG 3 cut(s) 1532, 2031, 2321
BslFI GGGAC 8 cut(s) 192, 1064, 1465, 1486, 1489, 1591, 1691, 1922
BsmAI GTCTC 5 cut(s) 117, 349, 554, 1614, 2028
BsmFI GGGAC 8 cut(s) 192, 1064, 1465, 1486, 1489, 1591, 1691, 1922
BsnI GGCC 8 cut(s) 29, 736, 1289, 1605, 1652, 1889, 1952, 2189
Bso31I GGTCTC 1 cut(s) 554
BsoBI CYCGRG 3 cut(s) 1532, 2031, 2321
Bsp1286I GDGCHC 3 cut(s) 1425, 2032, 2157
Bsp13I TCCGGA 1 cut(s) 1657
Bsp143I GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
Bsp1720I GCTNAGC 1 cut(s) 846
Bsp19I CCATGG 1 cut(s) 1876
BspANI GGCC 8 cut(s) 29, 736, 1289, 1605, 1652, 1889, 1952, 2189
BspCNI CTCAG 7 cut(s) 25, 244, 478, 838, 2016, 2032, 2191
BspDI ATCGAT 1 cut(s) 222
BspEI TCCGGA 1 cut(s) 1657
BspFNI CGCG 3 cut(s) 540, 578, 1982
BspMI ACCTGC 1 cut(s) 1012
BspOI GCTAGC 1 cut(s) 1758
BspPI GGATC 2 cut(s) 178, 1304
BspT107I GGYRCC 6 cut(s) 233, 308, 323, 345, 1024, 2226
BspTNI GGTCTC 1 cut(s) 554
BsrBI CCGCTC 2 cut(s) 1906, 1993
BsrDI GCAATG 1 cut(s) 913
BsrFI RCCGGY 2 cut(s) 230, 1699
BsrI ACTGG 8 cut(s) 349, 720, 822, 1054, 1356, 1606, 1669, 1962
BssAI RCCGGY 2 cut(s) 230, 1699
BssMI GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
BssNAI GTATAC 2 cut(s) 690, 1102
BssNI GRCGYC 1 cut(s) 1386
BssT1I CCWWGG 4 cut(s) 693, 1507, 1876, 1944
Bst1107I GTATAC 2 cut(s) 690, 1102
Bst4CI ACNGT 3 cut(s) 424, 1068, 1108
Bst6I CTCTTC 7 cut(s) 283, 363, 600, 1177, 1199, 1535, 1634
BstACI GRCGYC 1 cut(s) 1386
BstC8I GCNNGC 7 cut(s) 495, 504, 904, 1756, 1782, 1813, 2172
BstDSI CCRYGG 2 cut(s) 576, 1876
BstEII GGTNACC 1 cut(s) 66
BstFNI CGCG 3 cut(s) 540, 578, 1982
BstH2I RGCGCY 4 cut(s) 788, 813, 1526, 1787
BstHHI GCGC 4 cut(s) 787, 812, 1525, 1786
BstKTI GATC 7 cut(s) 173, 940, 1005, 1299, 1722, 1980, 2278
BstMAI GTCTC 5 cut(s) 117, 349, 554, 1614, 2028
BstMBI GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
BstNSI RCATGY 1 cut(s) 762
BstPI GGTNACC 1 cut(s) 66
BstUI CGCG 3 cut(s) 540, 578, 1982
BstV1I GCAGC 7 cut(s) 799, 1668, 1683, 1716, 1860, 2231, 2338
BstV2I GAAGAC 1 cut(s) 1239
BstXI CCANNNNNNTGG 4 cut(s) 37, 275, 1574, 1676
BstZ17I GTATAC 2 cut(s) 690, 1102
Bsu15I ATCGAT 1 cut(s) 222
Bsu36I CCTNAGG 1 cut(s) 731
BsuI GTATCC 1 cut(s) 1816
BsuRI GGCC 8 cut(s) 29, 736, 1289, 1605, 1652, 1889, 1952, 2189
BsuTUI ATCGAT 1 cut(s) 222
BtgI CCRYGG 2 cut(s) 576, 1876
BtgZI GCGATG 3 cut(s) 456, 1541, 1547
BtrI CACGTC 2 cut(s) 1120, 1303
BtsI GCAGTG 1 cut(s) 1579
BtsIMutI CAGTG 5 cut(s) 30, 249, 356, 1579, 1599
BveI ACCTGC 1 cut(s) 1012
Cac8I GCNNGC 7 cut(s) 495, 504, 904, 1756, 1782, 1813, 2172
CfoI GCGC 4 cut(s) 787, 812, 1525, 1786
Cfr10I RCCGGY 2 cut(s) 230, 1699
Cfr42I CCGCGG 1 cut(s) 579
Cfr9I CCCGGG 1 cut(s) 1532
ClaI ATCGAT 1 cut(s) 222
CseI GACGC 2 cut(s) 1261, 1394
CspAI ACCGGT 1 cut(s) 230
CviAII CATG 4 cut(s) 127, 759, 1877, 2070
DpnI GATC 7 cut(s) 172, 939, 1004, 1298, 1721, 1979, 2277
DpnII GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
EaeI YGGCCR 1 cut(s) 1950
Eam1104I CTCTTC 7 cut(s) 283, 363, 600, 1177, 1199, 1535, 1634
EarI CTCTTC 7 cut(s) 283, 363, 600, 1177, 1199, 1535, 1634
EciI GGCGGA 1 cut(s) 756
Ecl136II GAGCTC 1 cut(s) 2155
Eco130I CCWWGG 4 cut(s) 693, 1507, 1876, 1944
Eco147I AGGCCT 1 cut(s) 736
Eco24I GRGCYC 3 cut(s) 1425, 2032, 2157
Eco31I GGTCTC 1 cut(s) 554
Eco32I GATATC 1 cut(s) 1345
Eco47III AGCGCT 4 cut(s) 786, 811, 1524, 1785
Eco53kI GAGCTC 1 cut(s) 2155
Eco81I CCTNAGG 1 cut(s) 731
Eco88I CYCGRG 3 cut(s) 1532, 2031, 2321
Eco91I GGTNACC 1 cut(s) 66
EcoICRI GAGCTC 1 cut(s) 2155
EcoO109I RGGNCCY 3 cut(s) 1479, 1503, 1651
EcoO65I GGTNACC 1 cut(s) 66
EcoRV GATATC 1 cut(s) 1345
EcoT14I CCWWGG 4 cut(s) 693, 1507, 1876, 1944
EcoT38I GRGCYC 3 cut(s) 1425, 2032, 2157
ErhI CCWWGG 4 cut(s) 693, 1507, 1876, 1944
FaeI CATG 4 cut(s) 130, 762, 1880, 2073
FaqI GGGAC 8 cut(s) 192, 1064, 1465, 1486, 1489, 1591, 1691, 1922
FatI CATG 4 cut(s) 126, 758, 1876, 2069
FauI CCCGC 5 cut(s) 1401, 1899, 1975, 1986, 2356
FblI GTMKAC 4 cut(s) 689, 726, 1101, 1664
Fnu4HI GCNGC 7 cut(s) 813, 1682, 1697, 1730, 1849, 2220, 2352
FriOI GRGCYC 3 cut(s) 1425, 2032, 2157
Fsp4HI GCNGC 7 cut(s) 813, 1682, 1697, 1730, 1849, 2220, 2352
FspBI CTAG 6 cut(s) 272, 632, 677, 740, 1508, 1755
GlaI GCGC 4 cut(s) 786, 811, 1524, 1785
GluI GCNGC 7 cut(s) 813, 1682, 1697, 1730, 1849, 2220, 2352
GsaI CCCAGC 2 cut(s) 75, 990
GsuI CTGGAG 4 cut(s) 167, 1331, 1373, 1979
HaeII RGCGCY 4 cut(s) 788, 813, 1526, 1787
HaeIII GGCC 8 cut(s) 29, 736, 1289, 1605, 1652, 1889, 1952, 2189
HgaI GACGC 2 cut(s) 1261, 1394
HhaI GCGC 4 cut(s) 787, 812, 1525, 1786
Hin1I GRCGYC 1 cut(s) 1386
Hin1II CATG 4 cut(s) 130, 762, 1880, 2073
Hin6I GCGC 4 cut(s) 785, 810, 1523, 1784
HinP1I GCGC 4 cut(s) 785, 810, 1523, 1784
HincII GTYRAC 2 cut(s) 1665, 2345
HindII GTYRAC 2 cut(s) 1665, 2345
HindIII AAGCTT 2 cut(s) 84, 877
HphI GGTGA 8 cut(s) 60, 89, 90, 104, 305, 847, 1127, 1603
Hpy166II GTNNAC 9 cut(s) 281, 690, 727, 1102, 1306, 1447, 1599, 1665, 2345
Hpy188I TCNGA 6 cut(s) 487, 598, 1072, 1738, 2041, 2318
Hpy188III TCNNGA 7 cut(s) 184, 365, 551, 1006, 1658, 2180, 2279
Hpy8I GTNNAC 9 cut(s) 281, 690, 727, 1102, 1306, 1447, 1599, 1665, 2345
Hpy99I CGWCG 2 cut(s) 647, 1304
HpyCH4III ACNGT 3 cut(s) 424, 1068, 1108
HpyCH4IV ACGT 5 cut(s) 52, 112, 1119, 1302, 1595
HpyCH4V TGCA 4 cut(s) 659, 1094, 1224, 1780
HpySE526I ACGT 5 cut(s) 52, 112, 1119, 1302, 1595
Hsp92I GRCGYC 1 cut(s) 1386
Hsp92II CATG 4 cut(s) 130, 762, 1880, 2073
HspAI GCGC 4 cut(s) 785, 810, 1523, 1784
KflI GGGWCCC 2 cut(s) 1479, 1503
Kpn2I TCCGGA 1 cut(s) 1657
KpnI GGTACC 4 cut(s) 237, 327, 349, 2230
KspI CCGCGG 1 cut(s) 579
Kzo9I GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
LmnI GCTCC 3 cut(s) 466, 618, 2150
Lsp1109I GCAGC 7 cut(s) 799, 1668, 1683, 1716, 1860, 2231, 2338
LweI GCATC 6 cut(s) 121, 484, 502, 832, 1762, 1798
MaeI CTAG 6 cut(s) 272, 632, 677, 740, 1508, 1755
MaeII ACGT 5 cut(s) 52, 112, 1119, 1302, 1595
MaeIII GTNAC 9 cut(s) 66, 96, 226, 247, 293, 853, 1115, 1591, 2019
MalI GATC 7 cut(s) 172, 939, 1004, 1298, 1721, 1979, 2277
MbiI CCGCTC 2 cut(s) 1906, 1993
MboI GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
MfeI CAATTG 1 cut(s) 864
MhlI GDGCHC 3 cut(s) 1425, 2032, 2157
MlsI TGGCCA 1 cut(s) 1952
MluCI AATT 6 cut(s) 215, 376, 442, 660, 864, 1398
MluNI TGGCCA 1 cut(s) 1952
MmeI TCCRAC 3 cut(s) 618, 1875, 2296
Mox20I TGGCCA 1 cut(s) 1952
MroI TCCGGA 1 cut(s) 1657
MroXI GAANNNNTTC 2 cut(s) 1132, 1524
MscI TGGCCA 1 cut(s) 1952
MseI TTAA 5 cut(s) 218, 380, 837, 1194, 2199
MslI CAYNNNNRTG 4 cut(s) 35, 273, 1572, 2162
Msp20I TGGCCA 1 cut(s) 1952
MspA1I CMGCKG 6 cut(s) 75, 210, 578, 802, 1729, 2351
MunI CAATTG 1 cut(s) 864
MvnI CGCG 3 cut(s) 540, 578, 1982
NciI CCSGG 8 cut(s) 177, 313, 859, 1327, 1477, 1533, 1534, 1858
NcoI CCATGG 1 cut(s) 1876
NdeII GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
NheI GCTAGC 1 cut(s) 1754
NlaIII CATG 4 cut(s) 130, 762, 1880, 2073
NmuCI GTSAC 7 cut(s) 66, 96, 247, 293, 853, 1115, 1591
NspI RCATGY 1 cut(s) 762
OliI CACNNNNGTG 2 cut(s) 35, 1572
PaqCI CACCTGC 1 cut(s) 1012
PceI AGGCCT 1 cut(s) 736
PcsI WCGNNNNNNNCGW 2 cut(s) 651, 1812
PdmI GAANNNNTTC 2 cut(s) 1132, 1524
PfeI GAWTC 1 cut(s) 1143
PflFI GACNNNGTC 2 cut(s) 1477, 1669
PflMI CCANNNNNTGG 1 cut(s) 2070
PinAI ACCGGT 1 cut(s) 230
PkrI GCNGC 7 cut(s) 814, 1683, 1698, 1731, 1850, 2221, 2353
PpuMI RGGWCCY 2 cut(s) 1479, 1503
PshBI ATTAAT 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 2157
Psp1406I AACGTT 2 cut(s) 52, 112
Psp5II RGGWCCY 2 cut(s) 1479, 1503
PspEI GGTNACC 1 cut(s) 66
PspFI CCCAGC 2 cut(s) 71, 986
PspPPI RGGWCCY 2 cut(s) 1479, 1503
PsyI GACNNNGTC 2 cut(s) 1477, 1669
PvuII CAGCTG 3 cut(s) 210, 802, 1729
RseI CAYNNNNRTG 4 cut(s) 35, 273, 1572, 2162
SacI GAGCTC 1 cut(s) 2157
SacII CCGCGG 1 cut(s) 579
SalI GTCGAC 1 cut(s) 1663
SaqAI TTAA 5 cut(s) 218, 380, 837, 1194, 2199
SatI GCNGC 7 cut(s) 813, 1682, 1697, 1730, 1849, 2220, 2352
Sau3AI GATC 7 cut(s) 170, 937, 1002, 1296, 1719, 1977, 2275
SduI GDGCHC 3 cut(s) 1425, 2032, 2157
SfaNI GCATC 6 cut(s) 121, 484, 502, 832, 1762, 1798
Sfr303I CCGCGG 1 cut(s) 579
SgrBI CCGCGG 1 cut(s) 579
SmaI CCCGGG 1 cut(s) 1534
SmiMI CAYNNNNRTG 4 cut(s) 35, 273, 1572, 2162
SmlI CTYRAG 2 cut(s) 160, 1988
SmoI CTYRAG 2 cut(s) 160, 1988
Sse9I AATT 6 cut(s) 215, 376, 442, 660, 864, 1398
SseBI AGGCCT 1 cut(s) 736
SspMI CTAG 6 cut(s) 272, 632, 677, 740, 1508, 1755
SstI GAGCTC 1 cut(s) 2157
StuI AGGCCT 1 cut(s) 736
StyI CCWWGG 4 cut(s) 693, 1507, 1876, 1944
TaaI ACNGT 3 cut(s) 424, 1068, 1108
TaiI ACGT 5 cut(s) 55, 115, 1122, 1305, 1598
TaqI TCGA 5 cut(s) 222, 1299, 1425, 1664, 1806
TasI AATT 6 cut(s) 215, 376, 442, 660, 864, 1398
TatI WGTACW 3 cut(s) 829, 1063, 2202
TfiI GAWTC 1 cut(s) 1143
Tru1I TTAA 5 cut(s) 218, 380, 837, 1194, 2199
Tru9I TTAA 5 cut(s) 218, 380, 837, 1194, 2199
TscAI CASTG 5 cut(s) 37, 256, 356, 1579, 1606
TseFI GTSAC 7 cut(s) 66, 96, 247, 293, 853, 1115, 1591
TseI GCWGC 7 cut(s) 812, 1681, 1696, 1729, 1848, 2219, 2351
Tsp45I GTSAC 7 cut(s) 66, 96, 247, 293, 853, 1115, 1591
TspDTI ATGAA 7 cut(s) 96, 257, 558, 1135, 1286, 1544, 2250
TspGWI ACGGA 2 cut(s) 643, 1309
TspMI CCCGGG 1 cut(s) 1532
TspRI CASTG 5 cut(s) 37, 256, 356, 1579, 1606
Tth111I GACNNNGTC 2 cut(s) 1477, 1669
Van91I CCANNNNNTGG 1 cut(s) 2070
VspI ATTAAT 1 cut(s) 218
XapI RAATTY 2 cut(s) 376, 442
XceI RCATGY 1 cut(s) 762
XcmI CCANNNNNNNNNTGG 1 cut(s) 1960
XmaI CCCGGG 1 cut(s) 1532
XmaJI CCTAGG 1 cut(s) 1507
XmiI GTMKAC 4 cut(s) 689, 726, 1101, 1664
XmnI GAANNNNTTC 2 cut(s) 1132, 1524
XspI CTAG 6 cut(s) 272, 632, 677, 740, 1508, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.