Rmu_sc0005685.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005685.1
OG0000087
Physical Location & Seq
Forward (+)
5801 .. 6776
976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005685.1_g000003.1.cds

Sequence Viewer

Length: 756 bp
atggatggcaccaagctgatggaccagttgctcaaccaaggggaagatgccctgtttattgatgtcgatctagccgggaagaagatcgagaggtcattggatgagatgttgatggaactgtccgaggacacttatagggtgcccgatccggatgcccccatcgtgacccagttagaagcctcgacaactgaggttctcacgatagtggaacccgagaagagcaaggcgaaggcttcgagatcccaggtctctctttccagcgagtcccttgagagcaaggaaggtatgctccccggagacaagaggaagaggcagcaccggcaccgaagtggtgataaggaggaggtgacctacactggtagggatgtaatgggtaccagcgggaagaaaccccggaaaggtgacaaggtagtttccgaagcctctccctccctgggcctactatctgcaacagttcctcctctgcttaagaagcagattaagcaggtactctccgagtacggggtggctgaagaaaagtttgttcgctccatgctcgcagatatagacttagatcgggtcatgtatcttcacgaagagaagggcaatctggagaaggagcgaaactctctgaggcagaaggtcgattcgttaaccgtcaaggtgggggagctagaggagtcaaagaagaggatcccggagctggaaggcattgttagtgggctgaagaaggatgttgaggagctccgggaagtagaggagaaggccaactcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

251

Amino Acids

28.05

Weight (kDa)

5.25

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 475
Acc65I GGTACC 1 cut(s) 374
AccB1I GGYRCC 4 cut(s) 8, 139, 321, 374
AccIII TCCGGA 1 cut(s) 148
AciI CCGC 1 cut(s) 381
AclWI GGATC 4 cut(s) 140, 234, 667, 680
AcuI CTGAAG 2 cut(s) 531, 725
AfaI GTAC 3 cut(s) 376, 489, 500
AfiI CCNNNNNNNGG 4 cut(s) 398, 434, 501, 682
AflII CTTAAG 1 cut(s) 467
AjnI CCWGG 2 cut(s) 243, 432
AleI CACNNNNGTG 2 cut(s) 203, 327
AluBI AGCT 4 cut(s) 16, 652, 682, 724
AluI AGCT 4 cut(s) 16, 652, 682, 724
Alw21I GWGCWC 1 cut(s) 726
Alw26I GTCTC 2 cut(s) 253, 291
AlwI GGATC 4 cut(s) 140, 234, 667, 680
Ama87I CYCGRG 1 cut(s) 212
Aor13HI TCCGGA 1 cut(s) 148
AoxI GGCC 2 cut(s) 436, 744
ApeKI GCWGC 1 cut(s) 313
Asp718I GGTACC 1 cut(s) 374
AspS9I GGNCC 2 cut(s) 22, 436
AsuC2I CCSGG 5 cut(s) 76, 294, 394, 677, 728
AsuHPI GGTGA 3 cut(s) 344, 358, 413
AvaI CYCGRG 1 cut(s) 212
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 144
BamHI GGATCC 1 cut(s) 672
BanI GGYRCC 4 cut(s) 8, 139, 321, 374
BanII GRGCYC 1 cut(s) 726
Bbv12I GWGCWC 1 cut(s) 726
BbvI GCAGC 1 cut(s) 325
BccI CCATC 3 cut(s) 13, 106, 167
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BciT130I CCWGG 2 cut(s) 245, 434
BcnI CCSGG 5 cut(s) 76, 294, 394, 677, 728
BcoDI GTCTC 2 cut(s) 253, 291
BfaI CTAG 3 cut(s) 71, 653, 754
BfrI CTTAAG 1 cut(s) 467
BfuAI ACCTGC 1 cut(s) 475
BisI GCNGC 1 cut(s) 314
BlsI GCNGC 1 cut(s) 315
Bme1390I CCNGG 7 cut(s) 76, 245, 294, 394, 434, 677, 728
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 1 cut(s) 212
BmgT120I GGNCC 2 cut(s) 22, 436
BmiI GGNNCC 6 cut(s) 10, 141, 210, 323, 376, 674
BmrFI CCNGG 7 cut(s) 76, 245, 294, 394, 434, 677, 728
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 2 cut(s) 37, 142
BmuI ACTGGG 1 cut(s) 163
BplI GAGNNNNNCTC 2 cut(s) 590, 622
BpmI CTGGAG 1 cut(s) 611
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 5 cut(s) 76, 294, 394, 677, 728
BsaBI GATNNNNATC 1 cut(s) 66
BsaI GGTCTC 1 cut(s) 253
BsaJI CCNNGG 7 cut(s) 37, 123, 243, 292, 392, 432, 433
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 2 cut(s) 442, 472
Bsc4I CCNNNNNNNGG 4 cut(s) 398, 434, 501, 682
Bse118I RCCGGY 1 cut(s) 318
Bse1I ACTGG 3 cut(s) 25, 169, 361
Bse8I GATNNNNATC 1 cut(s) 66
BseAI TCCGGA 1 cut(s) 148
BseBI CCWGG 2 cut(s) 245, 434
BseDI CCNNGG 7 cut(s) 37, 123, 243, 292, 392, 432, 433
BseGI GGATG 5 cut(s) 10, 106, 157, 370, 718
BseJI GATNNNNATC 1 cut(s) 66
BseLI CCNNNNNNNGG 4 cut(s) 398, 434, 501, 682
BseMII CTCAG 2 cut(s) 180, 602
BseNI ACTGG 3 cut(s) 25, 169, 361
BseRI GAGGAG 5 cut(s) 356, 450, 671, 734, 752
BseSI GKGCMC 1 cut(s) 144
BseXI GCAGC 1 cut(s) 325
BshFI GGCC 2 cut(s) 438, 746
BshNI GGYRCC 4 cut(s) 8, 139, 321, 374
BsiHKAI GWGCWC 1 cut(s) 726
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 7 cut(s) 75, 149, 294, 319, 394, 677, 727
BslFI GGGAC 1 cut(s) 250
BslI CCNNNNNNNGG 4 cut(s) 398, 434, 501, 682
BsmAI GTCTC 2 cut(s) 253, 291
BsmFI GGGAC 1 cut(s) 250
BsnI GGCC 2 cut(s) 438, 746
Bso31I GGTCTC 1 cut(s) 253
BsoBI CYCGRG 1 cut(s) 212
Bsp1286I GDGCHC 2 cut(s) 144, 726
Bsp13I TCCGGA 1 cut(s) 148
Bsp143I GATC 6 cut(s) 67, 84, 145, 239, 553, 672
BspACI CCGC 1 cut(s) 381
BspANI GGCC 2 cut(s) 438, 746
BspCNI CTCAG 2 cut(s) 181, 603
BspEI TCCGGA 1 cut(s) 148
BspLI GGNNCC 6 cut(s) 10, 141, 210, 323, 376, 674
BspMI ACCTGC 1 cut(s) 475
BspPI GGATC 4 cut(s) 140, 234, 667, 680
BspQI GCTCTTC 1 cut(s) 212
BspT107I GGYRCC 4 cut(s) 8, 139, 321, 374
BspTI CTTAAG 1 cut(s) 467
BspTNI GGTCTC 1 cut(s) 253
BsrFI RCCGGY 1 cut(s) 318
BsrI ACTGG 3 cut(s) 25, 169, 361
BssAI RCCGGY 1 cut(s) 318
BssECI CCNNGG 7 cut(s) 37, 123, 243, 292, 392, 432, 433
BssMI GATC 6 cut(s) 67, 84, 145, 239, 553, 672
BssT1I CCWWGG 1 cut(s) 37
Bst2UI CCWGG 2 cut(s) 245, 434
Bst4CI ACNGT 3 cut(s) 120, 454, 637
Bst6I CTCTTC 4 cut(s) 212, 302, 570, 662
BstAFI CTTAAG 1 cut(s) 467
BstC8I GCNNGC 1 cut(s) 537
BstDEI CTNAG 3 cut(s) 189, 550, 611
BstEII GGTNACC 1 cut(s) 346
BstF5I GGATG 5 cut(s) 10, 106, 157, 370, 718
BstKTI GATC 6 cut(s) 70, 87, 148, 242, 556, 675
BstMAI GTCTC 2 cut(s) 253, 291
BstMBI GATC 6 cut(s) 67, 84, 145, 239, 553, 672
BstMWI GCNNNNNNNGC 3 cut(s) 319, 472, 481
BstNI CCWGG 2 cut(s) 245, 434
BstPI GGTNACC 1 cut(s) 346
BstSCI CCNGG 7 cut(s) 74, 243, 292, 392, 432, 675, 726
BstSLI GKGCMC 1 cut(s) 144
BstV1I GCAGC 1 cut(s) 325
BstX2I RGATCY 2 cut(s) 239, 672
BstXI CCANNNNNNTGG 1 cut(s) 19
BstYI RGATCY 2 cut(s) 239, 672
BsuRI GGCC 2 cut(s) 438, 746
BtsCI GGATG 5 cut(s) 10, 106, 157, 370, 718
BtsIMutI CAGTG 1 cut(s) 354
BveI ACCTGC 1 cut(s) 475
Cac8I GCNNGC 1 cut(s) 537
Cfr10I RCCGGY 1 cut(s) 318
Cfr13I GGNCC 2 cut(s) 22, 436
Csp6I GTAC 3 cut(s) 375, 488, 499
CviAII CATG 2 cut(s) 532, 562
CviQI GTAC 3 cut(s) 375, 488, 499
DdeI CTNAG 3 cut(s) 189, 550, 611
DpnI GATC 6 cut(s) 69, 86, 147, 241, 555, 674
DpnII GATC 6 cut(s) 67, 84, 145, 239, 553, 672
Eam1104I CTCTTC 4 cut(s) 212, 302, 570, 662
EarI CTCTTC 4 cut(s) 212, 302, 570, 662
Ecl136II GAGCTC 1 cut(s) 724
Eco130I CCWWGG 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 726
Eco31I GGTCTC 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 22
Eco53kI GAGCTC 1 cut(s) 724
Eco57I CTGAAG 2 cut(s) 531, 725
Eco88I CYCGRG 1 cut(s) 212
Eco91I GGTNACC 1 cut(s) 346
EcoICRI GAGCTC 1 cut(s) 724
EcoO65I GGTNACC 1 cut(s) 346
EcoRII CCWGG 2 cut(s) 243, 432
EcoT14I CCWWGG 1 cut(s) 37
EcoT38I GRGCYC 1 cut(s) 726
ErhI CCWWGG 1 cut(s) 37
FaeI CATG 2 cut(s) 535, 565
FaiI YATR 5 cut(s) 135, 287, 533, 545, 563
FaqI GGGAC 1 cut(s) 250
FatI CATG 2 cut(s) 531, 561
FauI CCCGC 1 cut(s) 374
Fnu4HI GCNGC 1 cut(s) 314
FokI GGATG 5 cut(s) 17, 113, 164, 377, 725
FriOI GRGCYC 1 cut(s) 726
Fsp4HI GCNGC 1 cut(s) 314
FspBI CTAG 3 cut(s) 71, 653, 754
GluI GCNGC 1 cut(s) 314
GsuI CTGGAG 1 cut(s) 611
HaeIII GGCC 2 cut(s) 438, 746
HapII CCGG 7 cut(s) 75, 149, 294, 319, 394, 677, 727
Hin1II CATG 2 cut(s) 535, 565
HincII GTYRAC 1 cut(s) 633
HindII GTYRAC 1 cut(s) 633
HinfI GANTC 3 cut(s) 263, 626, 659
HpaI GTTAAC 1 cut(s) 633
HpaII CCGG 7 cut(s) 75, 149, 294, 319, 394, 677, 727
HphI GGTGA 3 cut(s) 344, 358, 413
Hpy166II GTNNAC 1 cut(s) 633
Hpy188I TCNGA 4 cut(s) 124, 418, 496, 612
Hpy188III TCNNGA 7 cut(s) 88, 149, 163, 199, 237, 572, 590
Hpy8I GTNNAC 1 cut(s) 633
HpyAV CCTTC 8 cut(s) 223, 275, 574, 589, 613, 680, 703, 736
HpyCH4III ACNGT 3 cut(s) 120, 454, 637
HpyCH4V TGCA 1 cut(s) 449
HpyF10VI GCNNNNNNNGC 3 cut(s) 319, 472, 481
HpyF3I CTNAG 3 cut(s) 189, 550, 611
Hsp92II CATG 2 cut(s) 535, 565
Kpn2I TCCGGA 1 cut(s) 148
KpnI GGTACC 1 cut(s) 378
KspAI GTTAAC 1 cut(s) 633
Kzo9I GATC 6 cut(s) 67, 84, 145, 239, 553, 672
LguI GCTCTTC 1 cut(s) 212
LmnI GCTCC 7 cut(s) 294, 533, 598, 649, 679, 721, 729
Lsp1109I GCAGC 1 cut(s) 325
LweI GCATC 2 cut(s) 37, 142
MaeI CTAG 3 cut(s) 71, 653, 754
MaeIII GTNAC 3 cut(s) 163, 346, 401
MalI GATC 6 cut(s) 69, 86, 147, 241, 555, 674
MboI GATC 6 cut(s) 67, 84, 145, 239, 553, 672
MflI RGATCY 2 cut(s) 239, 672
MhlI GDGCHC 2 cut(s) 144, 726
MlyI GAGTC 2 cut(s) 272, 668
MroI TCCGGA 1 cut(s) 148
MseI TTAA 3 cut(s) 468, 480, 632
MslI CAYNNNNRTG 2 cut(s) 203, 327
MspA1I CMGCKG 1 cut(s) 381
MspCI CTTAAG 1 cut(s) 467
MspI CCGG 7 cut(s) 75, 149, 294, 319, 394, 677, 727
MspR9I CCNGG 7 cut(s) 76, 245, 294, 394, 434, 677, 728
MvaI CCWGG 2 cut(s) 245, 434
MwoI GCNNNNNNNGC 3 cut(s) 319, 472, 481
NciI CCSGG 5 cut(s) 76, 294, 394, 677, 728
NdeII GATC 6 cut(s) 67, 84, 145, 239, 553, 672
NlaIII CATG 2 cut(s) 535, 565
NlaIV GGNNCC 6 cut(s) 10, 141, 210, 323, 376, 674
NmuCI GTSAC 3 cut(s) 163, 346, 401
OliI CACNNNNGTG 2 cut(s) 203, 327
PasI CCCWGGG 1 cut(s) 433
PciSI GCTCTTC 1 cut(s) 212
PfeI GAWTC 1 cut(s) 626
PfoI TCCNGGA 2 cut(s) 675, 726
PkrI GCNGC 1 cut(s) 315
PleI GAGTC 2 cut(s) 271, 667
PpsI GAGTC 2 cut(s) 271, 667
Psp124BI GAGCTC 1 cut(s) 726
Psp6I CCWGG 2 cut(s) 243, 432
PspEI GGTNACC 1 cut(s) 346
PspGI CCWGG 2 cut(s) 243, 432
PspN4I GGNNCC 6 cut(s) 10, 141, 210, 323, 376, 674
PspPI GGNCC 2 cut(s) 22, 436
PsuI RGATCY 2 cut(s) 239, 672
RsaI GTAC 3 cut(s) 376, 489, 500
RsaNI GTAC 3 cut(s) 375, 488, 499
RseI CAYNNNNRTG 2 cut(s) 203, 327
SacI GAGCTC 1 cut(s) 726
SapI GCTCTTC 1 cut(s) 212
SaqAI TTAA 3 cut(s) 468, 480, 632
SatI GCNGC 1 cut(s) 314
Sau3AI GATC 6 cut(s) 67, 84, 145, 239, 553, 672
Sau96I GGNCC 2 cut(s) 22, 436
SchI GAGTC 2 cut(s) 272, 668
ScrFI CCNGG 7 cut(s) 76, 245, 294, 394, 434, 677, 728
SduI GDGCHC 2 cut(s) 144, 726
SfaNI GCATC 2 cut(s) 37, 142
SinI GGWCC 1 cut(s) 22
SmiMI CAYNNNNRTG 2 cut(s) 203, 327
SmlI CTYRAG 2 cut(s) 269, 467
SmoI CTYRAG 2 cut(s) 269, 467
SsiI CCGC 1 cut(s) 381
SspMI CTAG 3 cut(s) 71, 653, 754
SstI GAGCTC 1 cut(s) 726
StyD4I CCNGG 7 cut(s) 74, 243, 292, 392, 432, 675, 726
StyI CCWWGG 1 cut(s) 37
TaaI ACNGT 3 cut(s) 120, 454, 637
TaqI TCGA 5 cut(s) 66, 87, 182, 236, 624
TfiI GAWTC 1 cut(s) 626
Tru1I TTAA 3 cut(s) 468, 480, 632
Tru9I TTAA 3 cut(s) 468, 480, 632
TscAI CASTG 1 cut(s) 361
TseFI GTSAC 3 cut(s) 163, 346, 401
TseI GCWGC 1 cut(s) 313
Tsp45I GTSAC 3 cut(s) 163, 346, 401
TspRI CASTG 1 cut(s) 361
Vha464I CTTAAG 1 cut(s) 467
VpaK11BI GGWCC 1 cut(s) 22
XspI CTAG 3 cut(s) 71, 653, 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.