Rmu_sc0001436.1_g000015

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001436.1
OG0000087
Physical Location & Seq
Forward (+)
74975 .. 77013
2039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001436.1_g000015.1.cds

Sequence Viewer

Length: 1314 bp
atggagatatttgaatttcaagtgatgggagattctcaccaccatggtcctcctttgctggagaaaagatcctccatgagtggcggctcgccggaaaagtttgccggaaaaatcgccggaaaagtctatttgcaattttcttccaatcttcgtattaggaataagaaatggtacctaaagggtacgtttcaggccatcgggaaccagtcttactccttgtccgaggtcgagagaaaacgcatagcccgggtatacgctgtgtggagtgaagaagaaatgagctcatataggttcatccagtactccatactagaaaggctaggcctatggaggctccccgtgaaagtgctgaagaggaaacccaggaaaggtaaggaagacgacaagatggatgacaatcaacttatggaaatgttgatgagccaaggagaagaagcctttcacattgacgttgaattagcgtcgaaagctacaggtctctctgttgacgaagttcttctagagatcagtgaccaagacgaggacgtcttgcttccttgtgagaagagaaggctccacaaacaccgccatcggagccgggataatgaggaggtcacttacaccggctgggatgtcaaaggggcagggctgaaaaggcagaagaagagctatccgaagttcgtgcgttcgatgctggccgacctaaaagatatcaacctcgaccaagtacgagcgaaggacaactctccccaggcactattcaacgtgtacgcaatcgatgctagtgaggaagatactcacttgaaggaagaaatggtagagtccctaactcccaaggtagccgagctggaggtggccaagaagaagatcgtggatcttgagggtgaacttttcggggcgaggaatgagctagggagtgcccaggactccgagagggaagctgcagaatctgccaagtcatggaaggatagggcagatcatctggaggagcgccttccctttgagaagcaggaggccgttgccgggtacaaagattcccaaaagcttatggatatgttactcgctattaaagacaaggccgtaattctgaagtataaagagtgggtggcggccgggtacctggatgaagccaaattcatgcggggacttcttgagaagaagaagaaggaacaggaggctgcagccaaagctggtgcaggtggatcccagagtaacgctcttgaacagtggtgtttaggaattagtatatgtgtaattgtcctctttttagtagaaattacccttgccttgaacaatggcttaattctttttcctggtagtccaggttttttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

437

Amino Acids

49.65

Weight (kDa)

6.38

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1166
AasI GACNNNNNNGTC 1 cut(s) 524
AatII GACGTC 1 cut(s) 528
Acc36I ACCTGC 1 cut(s) 1166
Acc65I GGTACC 2 cut(s) 171, 1095
AccB1I GGYRCC 2 cut(s) 171, 1095
AccB7I CCANNNNNTGG 1 cut(s) 939
AccI GTMKAC 1 cut(s) 252
AciI CCGC 4 cut(s) 84, 565, 1088, 1120
AclWI GGATC 4 cut(s) 63, 861, 1176, 1189
AcoI YGGCCR 3 cut(s) 675, 834, 1089
AcsI RAATTY 2 cut(s) 14, 1112
AcuI CTGAAG 2 cut(s) 371, 1088
AcyI GRCGYC 1 cut(s) 525
AfaI GTAC 7 cut(s) 173, 184, 302, 708, 749, 1007, 1097
AfiI CCNNNNNNNGG 4 cut(s) 368, 520, 939, 1002
AflIII ACRYGT 1 cut(s) 744
AgsI TTSAA 7 cut(s) 14, 20, 455, 742, 784, 1202, 1270
AjnI CCWGG 6 cut(s) 362, 729, 900, 1098, 1291, 1300
AluBI AGCT 8 cut(s) 282, 470, 648, 826, 889, 920, 1024, 1169
AluI AGCT 8 cut(s) 282, 470, 648, 826, 889, 920, 1024, 1169
Alw21I GWGCWC 1 cut(s) 284
Alw26I GTCTC 1 cut(s) 482
AlwI GGATC 4 cut(s) 63, 861, 1176, 1189
AlwNI CAGNNNCTG 1 cut(s) 929
Ama87I CYCGRG 1 cut(s) 246
AoxI GGCC 7 cut(s) 192, 322, 675, 834, 993, 1056, 1089
ApeKI GCWGC 3 cut(s) 920, 1157, 1160
ApoI RAATTY 2 cut(s) 14, 1112
Asp700I GAANNNNTTC 2 cut(s) 438, 495
Asp718I GGTACC 2 cut(s) 171, 1095
AspLEI GCGC 1 cut(s) 972
AspS9I GGNCC 1 cut(s) 47
AsuC2I CCSGG 5 cut(s) 247, 248, 578, 1003, 1093
AsuHPI GGTGA 2 cut(s) 29, 875
AvaI CYCGRG 1 cut(s) 246
AvaII GGWCC 1 cut(s) 47
BaeGI GKGCMC 1 cut(s) 901
BalI TGGCCA 1 cut(s) 836
BamHI GGATCC 1 cut(s) 1181
BanI GGYRCC 2 cut(s) 171, 1095
BanII GRGCYC 1 cut(s) 284
BbsI GAAGAC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 284
BbvI GCAGC 3 cut(s) 907, 1144, 1172
BccI CCATC 4 cut(s) 19, 203, 382, 576
BceAI ACGGC 2 cut(s) 980, 1043
BcgI CGANNNNNNTGC 2 cut(s) 643, 677
BciT130I CCWGG 6 cut(s) 364, 731, 902, 1100, 1293, 1302
BcnI CCSGG 5 cut(s) 247, 248, 578, 1003, 1093
BcoDI GTCTC 1 cut(s) 482
BfaI CTAG 5 cut(s) 311, 320, 500, 762, 890
BfmI CTRYAG 3 cut(s) 471, 921, 1158
BfoI RGCGCY 1 cut(s) 973
BfuAI ACCTGC 1 cut(s) 1166
BisI GCNGC 5 cut(s) 85, 921, 1089, 1158, 1161
BlsI GCNGC 5 cut(s) 86, 922, 1090, 1159, 1162
BmcAI AGTACT 1 cut(s) 302
Bme18I GGWCC 1 cut(s) 47
BmeT110I CYCGRG 1 cut(s) 246
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 7 cut(s) 173, 203, 335, 554, 575, 1097, 1183
BmsI GCATC 2 cut(s) 660, 748
BpiI GAAGAC 1 cut(s) 384
BplI GAGNNNNNCTC 2 cut(s) 1180, 1212
BpmI CTGGAG 3 cut(s) 80, 848, 983
BpuEI CTTGAG 2 cut(s) 878, 1151
BpuMI CCSGG 5 cut(s) 247, 248, 578, 1003, 1093
Bsa29I ATCGAT 1 cut(s) 756
BsaBI GATNNNNATC 1 cut(s) 396
BsaHI GRCGYC 1 cut(s) 525
BsaI GGTCTC 1 cut(s) 482
BsaJI CCNNGG 8 cut(s) 43, 222, 246, 362, 424, 729, 813, 900
Bsc4I CCNNNNNNNGG 4 cut(s) 368, 520, 939, 1002
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 2 cut(s) 205, 298
Bse8I GATNNNNATC 1 cut(s) 396
BseBI CCWGG 6 cut(s) 364, 731, 902, 1100, 1293, 1302
BseCI ATCGAT 1 cut(s) 756
BseDI CCNNGG 8 cut(s) 43, 222, 246, 362, 424, 729, 813, 900
BseGI GGATG 4 cut(s) 294, 397, 616, 1108
BseJI GATNNNNATC 1 cut(s) 396
BseLI CCNNNNNNNGG 4 cut(s) 368, 520, 939, 1002
BseNI ACTGG 2 cut(s) 205, 298
BseRI GAGGAG 2 cut(s) 602, 980
BseSI GKGCMC 1 cut(s) 901
BseX3I CGGCCG 1 cut(s) 1089
BseXI GCAGC 3 cut(s) 907, 1144, 1172
BseYI CCCAGC 1 cut(s) 606
BsgI GTGCAG 1 cut(s) 1194
Bsh1285I CGRYCG 1 cut(s) 1092
BshFI GGCC 7 cut(s) 194, 324, 677, 836, 995, 1058, 1091
BshNI GGYRCC 2 cut(s) 171, 1095
BshVI ATCGAT 1 cut(s) 756
BsiEI CGRYCG 1 cut(s) 1092
BsiHKAI GWGCWC 1 cut(s) 284
BsiHKCI CYCGRG 1 cut(s) 246
BsiSI CCGG 8 cut(s) 92, 105, 117, 247, 577, 603, 1002, 1092
BslFI GGGAC 2 cut(s) 787, 1137
BslI CCNNNNNNNGG 4 cut(s) 368, 520, 939, 1002
BsmAI GTCTC 1 cut(s) 482
BsmFI GGGAC 2 cut(s) 787, 1137
BsnI GGCC 7 cut(s) 194, 324, 677, 836, 995, 1058, 1091
Bso31I GGTCTC 1 cut(s) 482
BsoBI CYCGRG 1 cut(s) 246
Bsp1286I GDGCHC 2 cut(s) 284, 901
Bsp143I GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
Bsp19I CCATGG 1 cut(s) 43
BspACI CCGC 4 cut(s) 84, 565, 1088, 1120
BspANI GGCC 7 cut(s) 194, 324, 677, 836, 995, 1058, 1091
BspDI ATCGAT 1 cut(s) 756
BspLI GGNNCC 7 cut(s) 173, 203, 335, 554, 575, 1097, 1183
BspMAI CTGCAG 2 cut(s) 925, 1162
BspMI ACCTGC 1 cut(s) 1166
BspPI GGATC 4 cut(s) 63, 861, 1176, 1189
BspQI GCTCTTC 1 cut(s) 638
BspT107I GGYRCC 2 cut(s) 171, 1095
BspTNI GGTCTC 1 cut(s) 482
BsrFI RCCGGY 1 cut(s) 602
BsrI ACTGG 2 cut(s) 205, 298
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 8 cut(s) 43, 222, 246, 362, 424, 729, 813, 900
BssMI GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
BssNAI GTATAC 1 cut(s) 253
BssNI GRCGYC 1 cut(s) 525
BssT1I CCWWGG 3 cut(s) 43, 424, 813
Bst1107I GTATAC 1 cut(s) 253
Bst2UI CCWGG 6 cut(s) 364, 731, 902, 1100, 1293, 1302
Bst4CI ACNGT 1 cut(s) 1206
Bst6I CTCTTC 3 cut(s) 347, 539, 638
BstACI GRCGYC 1 cut(s) 525
BstAPI GCANNNNNTGC 2 cut(s) 758, 929
BstC8I GCNNGC 2 cut(s) 89, 675
BstDSI CCRYGG 1 cut(s) 43
BstF5I GGATG 4 cut(s) 294, 397, 616, 1108
BstH2I RGCGCY 1 cut(s) 973
BstHHI GCGC 1 cut(s) 972
BstKTI GATC 6 cut(s) 71, 507, 849, 856, 958, 1184
BstMAI GTCTC 1 cut(s) 482
BstMBI GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
BstMCI CGRYCG 1 cut(s) 1092
BstMWI GCNNNNNNNGC 7 cut(s) 467, 573, 634, 670, 758, 929, 1166
BstNI CCWGG 6 cut(s) 364, 731, 902, 1100, 1293, 1302
BstSFI CTRYAG 3 cut(s) 471, 921, 1158
BstSLI GKGCMC 1 cut(s) 901
BstV1I GCAGC 3 cut(s) 907, 1144, 1172
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 3 cut(s) 68, 853, 1181
BstYI RGATCY 3 cut(s) 68, 853, 1181
BstZ17I GTATAC 1 cut(s) 253
BstZI CGGCCG 1 cut(s) 1089
Bsu15I ATCGAT 1 cut(s) 756
BsuRI GGCC 7 cut(s) 194, 324, 677, 836, 995, 1058, 1091
BsuTUI ATCGAT 1 cut(s) 756
BtgI CCRYGG 1 cut(s) 43
BtsCI GGATG 4 cut(s) 294, 397, 616, 1108
BtsIMutI CAGTG 2 cut(s) 514, 1211
BveI ACCTGC 1 cut(s) 1166
Cac8I GCNNGC 2 cut(s) 89, 675
CaiI CAGNNNCTG 1 cut(s) 929
CfoI GCGC 1 cut(s) 972
Cfr10I RCCGGY 1 cut(s) 602
Cfr13I GGNCC 1 cut(s) 47
Cfr9I CCCGGG 1 cut(s) 246
ClaI ATCGAT 1 cut(s) 756
CseI GACGC 1 cut(s) 450
Csp6I GTAC 7 cut(s) 172, 183, 301, 707, 748, 1006, 1096
CviAII CATG 4 cut(s) 44, 76, 939, 1117
CviQI GTAC 7 cut(s) 172, 183, 301, 707, 748, 1006, 1096
DpnI GATC 6 cut(s) 70, 506, 848, 855, 957, 1183
DpnII GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
DrdI GACNNNNNNGTC 1 cut(s) 524
DseDI GACNNNNNNGTC 1 cut(s) 524
EaeI YGGCCR 3 cut(s) 675, 834, 1089
EagI CGGCCG 1 cut(s) 1089
Eam1104I CTCTTC 3 cut(s) 347, 539, 638
EarI CTCTTC 3 cut(s) 347, 539, 638
Ecl136II GAGCTC 1 cut(s) 282
EclXI CGGCCG 1 cut(s) 1089
Eco130I CCWWGG 3 cut(s) 43, 424, 813
Eco147I AGGCCT 1 cut(s) 324
Eco24I GRGCYC 1 cut(s) 284
Eco31I GGTCTC 1 cut(s) 482
Eco32I GATATC 1 cut(s) 691
Eco47I GGWCC 1 cut(s) 47
Eco52I CGGCCG 1 cut(s) 1089
Eco53kI GAGCTC 1 cut(s) 282
Eco57I CTGAAG 2 cut(s) 371, 1088
Eco88I CYCGRG 1 cut(s) 246
EcoICRI GAGCTC 1 cut(s) 282
EcoRII CCWGG 6 cut(s) 362, 729, 900, 1098, 1291, 1300
EcoRV GATATC 1 cut(s) 691
EcoT14I CCWWGG 3 cut(s) 43, 424, 813
EcoT38I GRGCYC 1 cut(s) 284
ErhI CCWWGG 3 cut(s) 43, 424, 813
FaeI CATG 4 cut(s) 47, 79, 942, 1120
FaqI GGGAC 2 cut(s) 787, 1137
FatI CATG 4 cut(s) 43, 75, 938, 1116
FauI CCCGC 1 cut(s) 1113
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 5 cut(s) 85, 921, 1089, 1158, 1161
FokI GGATG 4 cut(s) 281, 404, 623, 1115
FriOI GRGCYC 1 cut(s) 284
Fsp4HI GCNGC 5 cut(s) 85, 921, 1089, 1158, 1161
FspBI CTAG 5 cut(s) 311, 320, 500, 762, 890
GlaI GCGC 1 cut(s) 971
GluI GCNGC 5 cut(s) 85, 921, 1089, 1158, 1161
GsaI CCCAGC 1 cut(s) 610
GsuI CTGGAG 3 cut(s) 80, 848, 983
HaeII RGCGCY 1 cut(s) 973
HaeIII GGCC 7 cut(s) 194, 324, 677, 836, 995, 1058, 1091
HapII CCGG 8 cut(s) 92, 105, 117, 247, 577, 603, 1002, 1092
HgaI GACGC 1 cut(s) 450
HhaI GCGC 1 cut(s) 972
Hin1I GRCGYC 1 cut(s) 525
Hin1II CATG 4 cut(s) 47, 79, 942, 1120
Hin6I GCGC 1 cut(s) 970
HinP1I GCGC 1 cut(s) 970
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HindIII AAGCTT 1 cut(s) 1022
HinfI GANTC 5 cut(s) 32, 800, 905, 926, 1013
HpaII CCGG 8 cut(s) 92, 105, 117, 247, 577, 603, 1002, 1092
HphI GGTGA 2 cut(s) 29, 875
Hpy166II GTNNAC 4 cut(s) 253, 487, 748, 866
Hpy188I TCNGA 5 cut(s) 223, 573, 654, 910, 1068
Hpy188III TCNNGA 7 cut(s) 199, 229, 500, 857, 962, 1130, 1199
Hpy8I GTNNAC 4 cut(s) 253, 487, 748, 866
Hpy99I CGWCG 1 cut(s) 466
HpyAV CCTTC 6 cut(s) 543, 709, 778, 937, 983, 1138
HpyCH4III ACNGT 1 cut(s) 1206
HpyCH4IV ACGT 4 cut(s) 185, 450, 525, 744
HpyCH4V TGCA 4 cut(s) 133, 923, 1160, 1175
HpyF10VI GCNNNNNNNGC 7 cut(s) 467, 573, 634, 670, 758, 929, 1166
HpySE526I ACGT 4 cut(s) 185, 450, 525, 744
Hsp92I GRCGYC 1 cut(s) 525
Hsp92II CATG 4 cut(s) 47, 79, 942, 1120
HspAI GCGC 1 cut(s) 970
KpnI GGTACC 2 cut(s) 175, 1099
Kzo9I GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 4 cut(s) 339, 558, 573, 967
Lsp1109I GCAGC 3 cut(s) 907, 1144, 1172
LweI GCATC 2 cut(s) 660, 748
MaeI CTAG 5 cut(s) 311, 320, 500, 762, 890
MaeII ACGT 4 cut(s) 185, 450, 525, 744
MaeIII GTNAC 4 cut(s) 509, 592, 1035, 1190
MalI GATC 6 cut(s) 70, 506, 848, 855, 957, 1183
MboI GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
MflI RGATCY 3 cut(s) 68, 853, 1181
MhlI GDGCHC 2 cut(s) 284, 901
MlsI TGGCCA 1 cut(s) 836
MluCI AATT 9 cut(s) 14, 134, 455, 1062, 1112, 1218, 1233, 1254, 1281
MluNI TGGCCA 1 cut(s) 836
MlyI GAGTC 2 cut(s) 809, 899
Mox20I TGGCCA 1 cut(s) 836
MroXI GAANNNNTTC 2 cut(s) 438, 495
MscI TGGCCA 1 cut(s) 836
MseI TTAA 2 cut(s) 1047, 1280
MslI CAYNNNNRTG 1 cut(s) 42
Msp20I TGGCCA 1 cut(s) 836
MspI CCGG 8 cut(s) 92, 105, 117, 247, 577, 603, 1002, 1092
MvaI CCWGG 6 cut(s) 364, 731, 902, 1100, 1293, 1302
MwoI GCNNNNNNNGC 7 cut(s) 467, 573, 634, 670, 758, 929, 1166
NciI CCSGG 5 cut(s) 247, 248, 578, 1003, 1093
NcoI CCATGG 1 cut(s) 43
NdeII GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
NlaIII CATG 4 cut(s) 47, 79, 942, 1120
NlaIV GGNNCC 7 cut(s) 173, 203, 335, 554, 575, 1097, 1183
NmeAIII GCCGAG 1 cut(s) 847
NmuCI GTSAC 2 cut(s) 509, 592
PaqCI CACCTGC 1 cut(s) 1166
PceI AGGCCT 1 cut(s) 324
PciSI GCTCTTC 1 cut(s) 638
PdmI GAANNNNTTC 2 cut(s) 438, 495
PfeI GAWTC 3 cut(s) 32, 926, 1013
PflMI CCANNNNNTGG 1 cut(s) 939
PkrI GCNGC 5 cut(s) 86, 922, 1090, 1159, 1162
PleI GAGTC 2 cut(s) 808, 899
PpsI GAGTC 2 cut(s) 808, 899
Psp124BI GAGCTC 1 cut(s) 284
Psp6I CCWGG 6 cut(s) 362, 729, 900, 1098, 1291, 1300
PspFI CCCAGC 1 cut(s) 606
PspGI CCWGG 6 cut(s) 362, 729, 900, 1098, 1291, 1300
PspN4I GGNNCC 7 cut(s) 173, 203, 335, 554, 575, 1097, 1183
PspPI GGNCC 1 cut(s) 47
PsrI GAACNNNNNNTAC 2 cut(s) 194, 226
PstI CTGCAG 2 cut(s) 925, 1162
PstNI CAGNNNCTG 1 cut(s) 929
PsuI RGATCY 3 cut(s) 68, 853, 1181
RsaI GTAC 7 cut(s) 173, 184, 302, 708, 749, 1007, 1097
RsaNI GTAC 7 cut(s) 172, 183, 301, 707, 748, 1006, 1096
RseI CAYNNNNRTG 1 cut(s) 42
SacI GAGCTC 1 cut(s) 284
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 2 cut(s) 1047, 1280
SatI GCNGC 5 cut(s) 85, 921, 1089, 1158, 1161
Sau3AI GATC 6 cut(s) 68, 504, 846, 853, 955, 1181
Sau96I GGNCC 1 cut(s) 47
ScaI AGTACT 1 cut(s) 302
SchI GAGTC 2 cut(s) 809, 899
SduI GDGCHC 2 cut(s) 284, 901
SfaNI GCATC 2 cut(s) 660, 748
SfcI CTRYAG 3 cut(s) 471, 921, 1158
SinI GGWCC 1 cut(s) 47
SmaI CCCGGG 1 cut(s) 248
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 2 cut(s) 857, 1130
SmoI CTYRAG 2 cut(s) 857, 1130
Sse9I AATT 9 cut(s) 14, 134, 455, 1062, 1112, 1218, 1233, 1254, 1281
SseBI AGGCCT 1 cut(s) 324
SsiI CCGC 4 cut(s) 84, 565, 1088, 1120
SspMI CTAG 5 cut(s) 311, 320, 500, 762, 890
SstI GAGCTC 1 cut(s) 284
StuI AGGCCT 1 cut(s) 324
StyI CCWWGG 3 cut(s) 43, 424, 813
TaaI ACNGT 1 cut(s) 1206
TaiI ACGT 4 cut(s) 188, 453, 528, 747
TaqI TCGA 5 cut(s) 228, 464, 668, 699, 756
TasI AATT 9 cut(s) 14, 134, 455, 1062, 1112, 1218, 1233, 1254, 1281
TatI WGTACW 1 cut(s) 300
TauI GCSGC 2 cut(s) 87, 1091
TfiI GAWTC 3 cut(s) 32, 926, 1013
Tru1I TTAA 2 cut(s) 1047, 1280
Tru9I TTAA 2 cut(s) 1047, 1280
TscAI CASTG 2 cut(s) 514, 1211
TseFI GTSAC 2 cut(s) 509, 592
TseI GCWGC 3 cut(s) 920, 1157, 1160
Tsp45I GTSAC 2 cut(s) 509, 592
TspDTI ATGAA 3 cut(s) 283, 1105, 1119
TspMI CCCGGG 1 cut(s) 246
TspRI CASTG 2 cut(s) 514, 1211
Van91I CCANNNNNTGG 1 cut(s) 939
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 2 cut(s) 14, 1112
XbaI TCTAGA 1 cut(s) 499
XmaI CCCGGG 1 cut(s) 246
XmiI GTMKAC 1 cut(s) 252
XmnI GAANNNNTTC 2 cut(s) 438, 495
XspI CTAG 5 cut(s) 311, 320, 500, 762, 890
ZraI GACGTC 1 cut(s) 526
ZrmI AGTACT 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.