Rmu_sc0003419.1_g000038

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003419.1
OG0000087
Physical Location & Seq
Forward (+)
128122 .. 129220
1099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003419.1_g000038.1.cds

Sequence Viewer

Length: 900 bp
ctggagatcaccgatgaggggtatggtgaacccgatcccgacgttcccgtgacccacgtcgtgcagccctctgtggccgacgttatcacgatagatgacaccggggcgggaaagggttttggtgctaagaggcagaagaaagatcacccgggactggagtcgtcaccatcgcttggcttgttgtctcctgccgttccggtaatccccaaaaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggtgacctcaaggatattgaccttgaccgggttcgggtcaaagacaatacgccccaagagaatcgctgtcttgtctcggaatccatgatgcgggcactcttcaatgtgtacgctattgacgccagcgaggaagatacttatctgaaggaagaggttagtaatctctccaggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcgttgaaggctgagatggccgccgccaagcagcggatcgcggagctggagggtgaagtctccgaggcgcgggaagaggtgaagaacgctcgggactctgagaaaaaagccgcagagtctgccatctcatggaaagagaaagtagaccacctggaggatcgccttcccgcagagaggcacgaggccgtggaggagtacaagtcctccgaagagctcatcgctatgctcactgctgcccaagataaagctgtcattatgaagtttaaggagtgggtggcggccgggtatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccggtgggtcccagagtaccgatggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

299

Amino Acids

33.21

Weight (kDa)

5.23

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 439
Acc36I ACCTGC 1 cut(s) 439
AccB1I GGYRCC 1 cut(s) 860
AccB7I CCANNNNNTGG 2 cut(s) 173, 627
AccBSI CCGCTC 2 cut(s) 493, 892
AccI GTMKAC 1 cut(s) 642
AccII CGCG 2 cut(s) 539, 568
AclWI GGATC 3 cut(s) 29, 542, 663
AcoI YGGCCR 3 cut(s) 75, 516, 777
AcsI RAATTY 1 cut(s) 800
AcuI CTGAAG 1 cut(s) 440
AcyI GRCGYC 1 cut(s) 396
AdeI CACNNNGTG 1 cut(s) 61
AfaI GTAC 4 cut(s) 239, 386, 695, 880
AgsI TTSAA 2 cut(s) 379, 505
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 3 cut(s) 443, 648, 816
AluBI AGCT 6 cut(s) 226, 481, 544, 712, 746, 797
AluI AGCT 6 cut(s) 226, 481, 544, 712, 746, 797
Alw21I GWGCWC 1 cut(s) 714
Alw26I GTCTC 4 cut(s) 189, 355, 562, 818
AlwI GGATC 3 cut(s) 29, 542, 663
AlwNI CAGNNNCTG 1 cut(s) 617
Ama87I CYCGRG 2 cut(s) 148, 588
AoxI GGCC 5 cut(s) 75, 474, 516, 681, 777
ApeKI GCWGC 4 cut(s) 64, 223, 529, 731
ApoI RAATTY 1 cut(s) 800
AspLEI GCGC 1 cut(s) 568
AspS9I GGNCC 2 cut(s) 267, 870
AsuC2I CCSGG 5 cut(s) 103, 149, 150, 305, 781
AsuHPI GGTGA 7 cut(s) 38, 137, 156, 290, 463, 563, 589
AvaI CYCGRG 2 cut(s) 148, 588
AvaII GGWCC 2 cut(s) 267, 870
BaeGI GKGCMC 1 cut(s) 373
BanI GGYRCC 1 cut(s) 860
BanII GRGCYC 1 cut(s) 714
BauI CACGAG 1 cut(s) 677
Bbv12I GWGCWC 1 cut(s) 714
BbvI GCAGC 4 cut(s) 76, 235, 541, 718
BccI CCATC 5 cut(s) 175, 224, 508, 629, 878
BceAI ACGGC 2 cut(s) 176, 668
BciT130I CCWGG 3 cut(s) 445, 650, 818
BcnI CCSGG 5 cut(s) 103, 149, 150, 305, 781
BcoDI GTCTC 4 cut(s) 189, 355, 562, 818
BfuAI ACCTGC 1 cut(s) 439
BisI GCNGC 9 cut(s) 65, 224, 519, 522, 530, 609, 732, 777, 846
BlsI GCNGC 9 cut(s) 66, 225, 520, 523, 531, 610, 733, 778, 847
Bme1390I CCNGG 8 cut(s) 103, 149, 150, 305, 445, 650, 781, 818
Bme18I GGWCC 2 cut(s) 267, 870
BmeT110I CYCGRG 2 cut(s) 148, 588
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 2 cut(s) 267, 870
BmiI GGNNCC 3 cut(s) 862, 871, 872
BmrFI CCNGG 8 cut(s) 103, 149, 150, 305, 445, 650, 781, 818
BmsI GCATC 1 cut(s) 354
BoxI GACNNNNGTC 2 cut(s) 56, 157
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 7 cut(s) 23, 176, 427, 503, 566, 671, 839
BpuEI CTTGAG 1 cut(s) 269
BpuMI CCSGG 5 cut(s) 103, 149, 150, 305, 781
BsaBI GATNNNNATC 1 cut(s) 414
BsaHI GRCGYC 1 cut(s) 396
BsaI GGTCTC 1 cut(s) 818
BsaJI CCNNGG 4 cut(s) 102, 148, 561, 684
BsaWI WCCGGW 1 cut(s) 196
BsaXI ACNNNNNCTCC 4 cut(s) 683, 686, 713, 716
Bse118I RCCGGY 1 cut(s) 863
Bse1I ACTGG 1 cut(s) 159
Bse8I GATNNNNATC 1 cut(s) 414
BseBI CCWGG 3 cut(s) 445, 650, 818
BseDI CCNNGG 4 cut(s) 102, 148, 561, 684
BseJI GATNNNNATC 1 cut(s) 414
BseMII CTCAG 2 cut(s) 501, 588
BseNI ACTGG 1 cut(s) 159
BseRI GAGGAG 1 cut(s) 704
BseSI GKGCMC 1 cut(s) 373
BseX3I CGGCCG 1 cut(s) 777
BseXI GCAGC 4 cut(s) 76, 235, 541, 718
BsgI GTGCAG 1 cut(s) 83
Bsh1236I CGCG 2 cut(s) 539, 568
Bsh1285I CGRYCG 1 cut(s) 780
BshFI GGCC 5 cut(s) 77, 476, 518, 683, 779
BshNI GGYRCC 1 cut(s) 860
BsiEI CGRYCG 1 cut(s) 780
BsiHKAI GWGCWC 1 cut(s) 714
BsiHKCI CYCGRG 2 cut(s) 148, 588
BsiSI CCGG 6 cut(s) 102, 149, 197, 304, 780, 864
BslFI GGGAC 4 cut(s) 165, 509, 605, 856
BsmAI GTCTC 4 cut(s) 189, 355, 562, 818
BsmFI GGGAC 4 cut(s) 165, 509, 605, 856
BsnI GGCC 5 cut(s) 77, 476, 518, 683, 779
Bso31I GGTCTC 1 cut(s) 818
BsoBI CYCGRG 2 cut(s) 148, 588
Bsp1286I GDGCHC 2 cut(s) 373, 714
Bsp143I GATC 6 cut(s) 6, 34, 142, 534, 655, 835
BspANI GGCC 5 cut(s) 77, 476, 518, 683, 779
BspCNI CTCAG 2 cut(s) 502, 589
BspFNI CGCG 2 cut(s) 539, 568
BspLI GGNNCC 3 cut(s) 862, 871, 872
BspMI ACCTGC 1 cut(s) 439
BspPI GGATC 3 cut(s) 29, 542, 663
BspQI GCTCTTC 1 cut(s) 702
BspT107I GGYRCC 1 cut(s) 860
BspTNI GGTCTC 1 cut(s) 818
BsrBI CCGCTC 2 cut(s) 493, 892
BsrFI RCCGGY 1 cut(s) 863
BsrI ACTGG 1 cut(s) 159
BssAI RCCGGY 1 cut(s) 863
BssECI CCNNGG 4 cut(s) 102, 148, 561, 684
BssMI GATC 6 cut(s) 6, 34, 142, 534, 655, 835
BssNI GRCGYC 1 cut(s) 396
BssSI CACGAG 1 cut(s) 677
Bst2BI CACGAG 1 cut(s) 677
Bst2UI CCWGG 3 cut(s) 445, 650, 818
Bst6I CTCTTC 4 cut(s) 380, 420, 567, 702
BstACI GRCGYC 1 cut(s) 396
BstAPI GCANNNNNTGC 1 cut(s) 617
BstC8I GCNNGC 3 cut(s) 369, 400, 890
BstDEI CTNAG 3 cut(s) 126, 510, 597
BstDSI CCRYGG 1 cut(s) 684
BstEII GGTNACC 1 cut(s) 278
BstFNI CGCG 2 cut(s) 539, 568
BstHHI GCGC 1 cut(s) 568
BstKTI GATC 6 cut(s) 9, 37, 145, 537, 658, 838
BstMAI GTCTC 4 cut(s) 189, 355, 562, 818
BstMBI GATC 6 cut(s) 6, 34, 142, 534, 655, 835
BstMCI CGRYCG 1 cut(s) 780
BstMWI GCNNNNNNNGC 5 cut(s) 220, 271, 395, 515, 617
BstNI CCWGG 3 cut(s) 445, 650, 818
BstPAI GACNNNNGTC 2 cut(s) 56, 157
BstPI GGTNACC 1 cut(s) 278
BstSCI CCNGG 8 cut(s) 101, 147, 148, 303, 443, 648, 779, 816
BstSLI GKGCMC 1 cut(s) 373
BstUI CGCG 2 cut(s) 539, 568
BstV1I GCAGC 4 cut(s) 76, 235, 541, 718
BstZI CGGCCG 1 cut(s) 777
BsuRI GGCC 5 cut(s) 77, 476, 518, 683, 779
BtgI CCRYGG 1 cut(s) 684
BtgZI GCGATG 2 cut(s) 153, 700
BtrI CACGTC 1 cut(s) 58
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 1 cut(s) 726
BveI ACCTGC 1 cut(s) 439
Cac8I GCNNGC 3 cut(s) 369, 400, 890
CaiI CAGNNNCTG 1 cut(s) 617
CfoI GCGC 1 cut(s) 568
Cfr10I RCCGGY 1 cut(s) 863
Cfr13I GGNCC 2 cut(s) 267, 870
Cfr9I CCCGGG 1 cut(s) 148
CseI GACGC 1 cut(s) 404
Csp6I GTAC 4 cut(s) 238, 385, 694, 879
CviAII CATG 4 cut(s) 271, 361, 464, 627
CviQI GTAC 4 cut(s) 238, 385, 694, 879
DdeI CTNAG 3 cut(s) 126, 510, 597
DpnI GATC 6 cut(s) 8, 36, 144, 536, 657, 837
DpnII GATC 6 cut(s) 6, 34, 142, 534, 655, 835
DraIII CACNNNGTG 1 cut(s) 61
EaeI YGGCCR 3 cut(s) 75, 516, 777
EagI CGGCCG 1 cut(s) 777
Eam1104I CTCTTC 4 cut(s) 380, 420, 567, 702
EarI CTCTTC 4 cut(s) 380, 420, 567, 702
Ecl136II GAGCTC 1 cut(s) 712
EclXI CGGCCG 1 cut(s) 777
Eco24I GRGCYC 1 cut(s) 714
Eco31I GGTCTC 1 cut(s) 818
Eco47I GGWCC 2 cut(s) 267, 870
Eco52I CGGCCG 1 cut(s) 777
Eco53kI GAGCTC 1 cut(s) 712
Eco57I CTGAAG 1 cut(s) 440
Eco88I CYCGRG 2 cut(s) 148, 588
Eco91I GGTNACC 1 cut(s) 278
EcoICRI GAGCTC 1 cut(s) 712
EcoO109I RGGNCCY 1 cut(s) 870
EcoO65I GGTNACC 1 cut(s) 278
EcoRII CCWGG 3 cut(s) 443, 648, 816
EcoT38I GRGCYC 1 cut(s) 714
FaeI CATG 4 cut(s) 274, 364, 467, 630
FaiI YATR 7 cut(s) 24, 272, 362, 465, 628, 722, 755
FaqI GGGAC 4 cut(s) 165, 509, 605, 856
FatI CATG 4 cut(s) 270, 360, 463, 626
FauI CCCGC 6 cut(s) 100, 360, 486, 561, 673, 801
FblI GTMKAC 1 cut(s) 642
Fnu4HI GCNGC 9 cut(s) 65, 224, 519, 522, 530, 609, 732, 777, 846
FriOI GRGCYC 1 cut(s) 714
Fsp4HI GCNGC 9 cut(s) 65, 224, 519, 522, 530, 609, 732, 777, 846
GlaI GCGC 1 cut(s) 567
GluI GCNGC 9 cut(s) 65, 224, 519, 522, 530, 609, 732, 777, 846
GsuI CTGGAG 7 cut(s) 23, 176, 427, 503, 566, 671, 839
HaeIII GGCC 5 cut(s) 77, 476, 518, 683, 779
HapII CCGG 6 cut(s) 102, 149, 197, 304, 780, 864
HgaI GACGC 1 cut(s) 404
HhaI GCGC 1 cut(s) 568
Hin1I GRCGYC 1 cut(s) 396
Hin1II CATG 4 cut(s) 274, 364, 467, 630
Hin6I GCGC 1 cut(s) 566
HinP1I GCGC 1 cut(s) 566
HinfI GANTC 6 cut(s) 158, 337, 356, 497, 593, 614
HpaII CCGG 6 cut(s) 102, 149, 197, 304, 780, 864
HphI GGTGA 7 cut(s) 38, 137, 156, 290, 463, 563, 589
Hpy166II GTNNAC 3 cut(s) 29, 385, 643
Hpy188I TCNGA 5 cut(s) 355, 420, 562, 598, 706
Hpy188III TCNNGA 4 cut(s) 38, 88, 590, 839
Hpy8I GTNNAC 3 cut(s) 29, 385, 643
Hpy99I CGWCG 3 cut(s) 44, 62, 83
HpyAV CCTTC 5 cut(s) 415, 466, 481, 499, 671
HpyCH4IV ACGT 3 cut(s) 42, 57, 81
HpyCH4V TGCA 1 cut(s) 64
HpyF10VI GCNNNNNNNGC 5 cut(s) 220, 271, 395, 515, 617
HpyF3I CTNAG 3 cut(s) 126, 510, 597
HpySE526I ACGT 3 cut(s) 42, 57, 81
Hsp92I GRCGYC 1 cut(s) 396
Hsp92II CATG 4 cut(s) 274, 364, 467, 630
HspAI GCGC 1 cut(s) 566
KflI GGGWCCC 1 cut(s) 870
Kzo9I GATC 6 cut(s) 6, 34, 142, 534, 655, 835
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 2 cut(s) 490, 541
Lsp1109I GCAGC 4 cut(s) 76, 235, 541, 718
LweI GCATC 1 cut(s) 354
MaeII ACGT 3 cut(s) 42, 57, 81
MaeIII GTNAC 3 cut(s) 49, 162, 278
MalI GATC 6 cut(s) 8, 36, 144, 536, 657, 837
MbiI CCGCTC 2 cut(s) 493, 892
MboI GATC 6 cut(s) 6, 34, 142, 534, 655, 835
MboII GAAGA 9 cut(s) 148, 367, 419, 437, 452, 584, 592, 719, 841
MhlI GDGCHC 2 cut(s) 373, 714
MluCI AATT 1 cut(s) 800
MlyI GAGTC 4 cut(s) 167, 491, 587, 623
MseI TTAA 1 cut(s) 762
MslI CAYNNNNRTG 1 cut(s) 719
MspA1I CMGCKG 2 cut(s) 226, 532
MspI CCGG 6 cut(s) 102, 149, 197, 304, 780, 864
MspR9I CCNGG 8 cut(s) 103, 149, 150, 305, 445, 650, 781, 818
MvaI CCWGG 3 cut(s) 445, 650, 818
MvnI CGCG 2 cut(s) 539, 568
MwoI GCNNNNNNNGC 5 cut(s) 220, 271, 395, 515, 617
NciI CCSGG 5 cut(s) 103, 149, 150, 305, 781
NdeII GATC 6 cut(s) 6, 34, 142, 534, 655, 835
NlaIII CATG 4 cut(s) 274, 364, 467, 630
NlaIV GGNNCC 3 cut(s) 862, 871, 872
NmuCI GTSAC 3 cut(s) 49, 162, 278
PaqCI CACCTGC 1 cut(s) 439
PciSI GCTCTTC 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PfeI GAWTC 2 cut(s) 337, 356
PflMI CCANNNNNTGG 2 cut(s) 173, 627
PfoI TCCNGGA 1 cut(s) 816
PkrI GCNGC 9 cut(s) 66, 225, 520, 523, 531, 610, 733, 778, 847
PleI GAGTC 4 cut(s) 166, 491, 587, 622
PpsI GAGTC 4 cut(s) 166, 491, 587, 622
PpuMI RGGWCCY 1 cut(s) 870
PshAI GACNNNNGTC 2 cut(s) 56, 157
Psp124BI GAGCTC 1 cut(s) 714
Psp5II RGGWCCY 1 cut(s) 870
Psp6I CCWGG 3 cut(s) 443, 648, 816
PspEI GGTNACC 1 cut(s) 278
PspGI CCWGG 3 cut(s) 443, 648, 816
PspN4I GGNNCC 3 cut(s) 862, 871, 872
PspPI GGNCC 2 cut(s) 267, 870
PspPPI RGGWCCY 1 cut(s) 870
PstNI CAGNNNCTG 1 cut(s) 617
PvuII CAGCTG 1 cut(s) 226
RsaI GTAC 4 cut(s) 239, 386, 695, 880
RsaNI GTAC 4 cut(s) 238, 385, 694, 879
RseI CAYNNNNRTG 1 cut(s) 719
SacI GAGCTC 1 cut(s) 714
SapI GCTCTTC 1 cut(s) 702
SaqAI TTAA 1 cut(s) 762
SatI GCNGC 9 cut(s) 65, 224, 519, 522, 530, 609, 732, 777, 846
Sau3AI GATC 6 cut(s) 6, 34, 142, 534, 655, 835
Sau96I GGNCC 2 cut(s) 267, 870
SchI GAGTC 4 cut(s) 167, 491, 587, 623
ScrFI CCNGG 8 cut(s) 103, 149, 150, 305, 445, 650, 781, 818
SduI GDGCHC 2 cut(s) 373, 714
SfaNI GCATC 1 cut(s) 354
SinI GGWCC 2 cut(s) 267, 870
SmaI CCCGGG 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 719
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 1 cut(s) 800
SstI GAGCTC 1 cut(s) 714
StyD4I CCNGG 8 cut(s) 101, 147, 148, 303, 443, 648, 779, 816
TaiI ACGT 3 cut(s) 45, 60, 84
TasI AATT 1 cut(s) 800
TatI WGTACW 1 cut(s) 693
TauI GCSGC 5 cut(s) 521, 524, 611, 779, 848
TfiI GAWTC 2 cut(s) 337, 356
Tru1I TTAA 1 cut(s) 762
Tru9I TTAA 1 cut(s) 762
TscAI CASTG 1 cut(s) 733
TseFI GTSAC 3 cut(s) 49, 162, 278
TseI GCWGC 4 cut(s) 64, 223, 529, 731
Tsp45I GTSAC 3 cut(s) 49, 162, 278
TspDTI ATGAA 4 cut(s) 267, 452, 770, 807
TspMI CCCGGG 1 cut(s) 148
TspRI CASTG 1 cut(s) 733
Van91I CCANNNNNTGG 2 cut(s) 173, 627
VpaK11BI GGWCC 2 cut(s) 267, 870
XapI RAATTY 1 cut(s) 800
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XmaI CCCGGG 1 cut(s) 148
XmiI GTMKAC 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.