Rmu_sc0000842.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000842.1
OG0000087
Physical Location & Seq
Forward (+)
70018 .. 72332
2315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000842.1_g000021.1.cds

Sequence Viewer

Length: 2085 bp
atggaattagaaaccaaggccggggatgcgggatcgtcgtatcagtcttctgcgaggcaagctgaacgggatatcgaccggtacttggagcgaagtagaaccgggaaggaattagctgagaatactggatcctcgactaggttgttctcggagagtagtgaggggaccgacgaaggtgagagcaaggatggatctgcggaggcgctggtagtcacattggctattcctaagggcatcccaaaacctaggtacaccttagtacacgggaccgtatgtgacgaacctgggagaagtatgactataaaggagatcatcaccatgagattgaagtggggaatactggacaaggtagagcttaggcctctcaaggctggagagatggctacgaatcctcccccgggatgggtggcgctgcacgagaaccagctccaccaaggcctatcgctaccgctgcccaggtgcctacagtatcttttgcggatgctgaacctgtcgtcgaggcagttgactccgaatgcagttcgacaaatatttagtatgatggccatgtgggacttgtgccagcaagggcggccttccataaatgaattccgcgcagtacacagggttctgtacttaaggaagcaatcgtgtataggtaccttgatgtttgccgctagggattacgagcccttagttaccgatatgcctacctcaatgagcaaaaggtggaggaataaagcctattcattatccgagttggaaaggaaaaggatagcccgggtatacgctgcttggagtgaggaggagagaagctcttatagattcatccggtactctatacctgataggctagggctagagagactcccagtgaaagcaccaaaaaggaaaccccagaaaggtaaggaggacgacaaaatggatgacaaccagttgatggacatgttgatgagccagggagaagaccccgacctggagttgaaggctacgggtcgctccgttgaagaaaccctactggagatcactgatggaggatacggggagactgaccctgatgctcccgtaacccaagtcgagcagccttctgccgggaatattgtcaccatagctgatcccggaagggaaaaggtgccggtcgtcgtatctctctcttctcgatccgctggaagcgatgaagtcttgcttccaggtaagaagaagagatcacataggcaccggcaccgaagcgacgataagcaggaggtcagttttcgggacacctataccggccaggatgtcaaagaatccgtggcgaagaggcagaagaaagatcatccgggaccagagtcgccgctctcgcttggcatgttgtctcctgccataccggtaatccccaaaaagcccattaaacaattgttgaacgagtacggggttgctgatgaaaagttcgtgcggtccatgctcgcctacctgaaggatatagacctctatcgggtgcgggccagaggcaataccccgcaagagaatcgtcgcctttcccgggagacaatgaggcgggcacttttcaatgtgtacgcaattgatgccagcgaggaagatacgtacctgaaggaggaggttagcagtctctccgggcaggtgaagtatctgcatggggagaaggctaagctggagaaggagggggagtccttgaaaaagaagatcaagtccttgactccgatggttaccaaactggatgcggcgaagcgacgaatcgcggagcttgagggcgaaatgtgtgaggcgagggatgaggtgaaaagtgctcgggactctgaaaaagaagctgctgagtctgccaagtcatggaaggcgagggcagatcatctggaggagtgccttccaatggagaggcatgaggctgtggaggagtacaagggctctcaacagcttattgatatgttagctgctgctcaagacaaggccgtgatcatgaagttcaaggagtgggtggcagccgggtacctagatgaaaccaaatttccgcggggacttcttgagagaagaagaagaaagatcaggaggcggcagccaagtctggtgccggtggatcccagagtaccgctcgcgagcagtagtccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

694

Amino Acids

78.56

Weight (kDa)

9.01

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1588
Acc36I ACCTGC 1 cut(s) 1588
Acc65I GGTACC 2 cut(s) 638, 1962
AccB1I GGYRCC 7 cut(s) 459, 638, 1111, 1194, 1200, 1962, 2041
AccB7I CCANNNNNTGG 2 cut(s) 919, 1806
AccBSI CCGCTC 2 cut(s) 1315, 2065
AccI GTMKAC 1 cut(s) 765
AccII CGCG 4 cut(s) 594, 1718, 1987, 2069
AclWI GGATC 8 cut(s) 40, 123, 136, 199, 1088, 1134, 2045, 2058
AcoI YGGCCR 2 cut(s) 543, 1249
AcsI RAATTY 2 cut(s) 587, 1979
AcuI CTGAAG 2 cut(s) 1454, 1589
AflII CTTAAG 1 cut(s) 616
AflIII ACRYGT 1 cut(s) 924
AgeI ACCGGT 2 cut(s) 78, 1345
AgsI TTSAA 7 cut(s) 328, 964, 986, 1381, 1528, 1654, 1942
AjnI CCWGG 6 cut(s) 283, 455, 936, 954, 1168, 1251
Alw21I GWGCWC 1 cut(s) 1768
Alw26I GTCTC 5 cut(s) 838, 1019, 1338, 1499, 1592
AlwI GGATC 8 cut(s) 40, 123, 136, 199, 1088, 1134, 2045, 2058
Ama87I CYCGRG 4 cut(s) 397, 759, 1500, 1767
AoxI GGCC 8 cut(s) 18, 359, 436, 543, 572, 1249, 1461, 1923
ApeKI GCWGC 9 cut(s) 412, 451, 770, 1060, 1787, 1907, 1910, 1955, 2029
ApoI RAATTY 2 cut(s) 587, 1979
AsiGI ACCGGT 2 cut(s) 78, 1345
Asp718I GGTACC 2 cut(s) 638, 1962
AspA2I CCTAGG 1 cut(s) 245
AspLEI GCGC 3 cut(s) 205, 412, 596
AspS9I GGNCC 5 cut(s) 165, 267, 1301, 1416, 1461
AsuHPI GGTGA 5 cut(s) 188, 307, 1075, 1612, 1768
AvaI CYCGRG 4 cut(s) 397, 759, 1500, 1767
AvaII GGWCC 4 cut(s) 165, 267, 1301, 1416
AvrII CCTAGG 1 cut(s) 245
AxyI CCTNAGG 1 cut(s) 228
BaeGI GKGCMC 1 cut(s) 1522
BalI TGGCCA 1 cut(s) 545
BamHI GGATCC 2 cut(s) 128, 2050
BanI GGYRCC 7 cut(s) 459, 638, 1111, 1194, 1200, 1962, 2041
BanII GRGCYC 2 cut(s) 672, 1883
BarI GAAGNNNNNNTAC 2 cut(s) 978, 1010
BauI CACGAG 1 cut(s) 416
BbsI GAAGAC 2 cut(s) 39, 951
Bbv12I GWGCWC 1 cut(s) 1768
BbvI GCAGC 9 cut(s) 399, 438, 757, 1072, 1774, 1894, 1897, 1967, 2041
BccI CCATC 7 cut(s) 182, 373, 396, 535, 913, 1004, 1675
BceAI ACGGC 1 cut(s) 1910
BcgI CGANNNNNNTGC 2 cut(s) 1469, 1503
BciT130I CCWGG 6 cut(s) 285, 457, 938, 956, 1170, 1253
BciVI GTATCC 1 cut(s) 1010
BclI TGATCA 1 cut(s) 1929
BcoDI GTCTC 5 cut(s) 838, 1019, 1338, 1499, 1592
BfaI CTAG 6 cut(s) 138, 246, 657, 833, 839, 1967
BfmI CTRYAG 1 cut(s) 464
BfoI RGCGCY 2 cut(s) 206, 413
BfrI CTTAAG 1 cut(s) 616
BfuAI ACCTGC 1 cut(s) 1588
BfuI GTATCC 1 cut(s) 1010
BlnI CCTAGG 1 cut(s) 245
BlpI GCTNAGC 1 cut(s) 1626
Bme18I GGWCC 4 cut(s) 165, 267, 1301, 1416
BmeT110I CYCGRG 4 cut(s) 397, 759, 1500, 1767
BmgT120I GGNCC 5 cut(s) 165, 267, 1301, 1416, 1461
BmrI ACTGGG 1 cut(s) 845
BmsI GCATC 6 cut(s) 16, 243, 471, 1027, 1534, 1687
BmuI ACTGGG 1 cut(s) 845
BoxI GACNNNNGTC 1 cut(s) 1306
BpiI GAAGAC 2 cut(s) 39, 951
BplI GAGNNNNNCTC 4 cut(s) 779, 811, 2049, 2081
BpmI CTGGAG 5 cut(s) 393, 977, 1019, 1652, 1850
Bpu10I CCTNAGC 1 cut(s) 356
Bpu1102I GCTNAGC 1 cut(s) 1626
BpuEI CTTGAG 4 cut(s) 350, 1745, 1899, 2018
BsaAI YACGTR 1 cut(s) 1563
BsaWI WCCGGW 3 cut(s) 78, 810, 1345
BsaXI ACNNNNNCTCC 4 cut(s) 376, 406, 1631, 1661
Bse118I RCCGGY 6 cut(s) 78, 1114, 1197, 1247, 1345, 2044
Bse1I ACTGG 6 cut(s) 130, 345, 851, 913, 1002, 1698
Bse21I CCTNAGG 1 cut(s) 228
BseBI CCWGG 6 cut(s) 285, 457, 938, 956, 1170, 1253
BseMII CTCAG 2 cut(s) 108, 1782
BseNI ACTGG 6 cut(s) 130, 345, 851, 913, 1002, 1698
BseRI GAGGAG 5 cut(s) 797, 800, 1589, 1847, 1883
BseSI GKGCMC 1 cut(s) 1522
BseXI GCAGC 9 cut(s) 399, 438, 757, 1072, 1774, 1894, 1897, 1967, 2041
BsgI GTGCAG 1 cut(s) 398
Bsh1236I CGCG 4 cut(s) 594, 1718, 1987, 2069
Bsh1285I CGRYCG 2 cut(s) 79, 1119
BshFI GGCC 8 cut(s) 20, 361, 438, 545, 574, 1251, 1463, 1925
BshNI GGYRCC 7 cut(s) 459, 638, 1111, 1194, 1200, 1962, 2041
BshTI ACCGGT 2 cut(s) 78, 1345
BsiEI CGRYCG 2 cut(s) 79, 1119
BsiHKAI GWGCWC 1 cut(s) 1768
BsiHKCI CYCGRG 4 cut(s) 397, 759, 1500, 1767
BslFI GGGAC 7 cut(s) 178, 280, 566, 1250, 1314, 1784, 2004
BsmAI GTCTC 5 cut(s) 838, 1019, 1338, 1499, 1592
BsmFI GGGAC 7 cut(s) 178, 280, 566, 1250, 1314, 1784, 2004
BsmI GAATGC 1 cut(s) 520
BsnI GGCC 8 cut(s) 20, 361, 438, 545, 574, 1251, 1463, 1925
BsoBI CYCGRG 4 cut(s) 397, 759, 1500, 1767
Bsp1286I GDGCHC 4 cut(s) 672, 1522, 1768, 1883
Bsp1720I GCTNAGC 1 cut(s) 1626
Bsp68I TCGCGA 1 cut(s) 2069
BspANI GGCC 8 cut(s) 20, 361, 438, 545, 574, 1251, 1463, 1925
BspCNI CTCAG 2 cut(s) 109, 1783
BspFNI CGCG 4 cut(s) 594, 1718, 1987, 2069
BspHI TCATGA 1 cut(s) 1932
BspMI ACCTGC 1 cut(s) 1588
BspPI GGATC 8 cut(s) 40, 123, 136, 199, 1088, 1134, 2045, 2058
BspT107I GGYRCC 7 cut(s) 459, 638, 1111, 1194, 1200, 1962, 2041
BspTI CTTAAG 1 cut(s) 616
BsrBI CCGCTC 2 cut(s) 1315, 2065
BsrFI RCCGGY 6 cut(s) 78, 1114, 1197, 1247, 1345, 2044
BsrI ACTGG 6 cut(s) 130, 345, 851, 913, 1002, 1698
BssAI RCCGGY 6 cut(s) 78, 1114, 1197, 1247, 1345, 2044
BssNAI GTATAC 1 cut(s) 766
BssSI CACGAG 1 cut(s) 416
BssT1I CCWWGG 3 cut(s) 15, 245, 433
Bst1107I GTATAC 1 cut(s) 766
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 6 cut(s) 285, 457, 938, 956, 1170, 1253
Bst4CI ACNGT 2 cut(s) 271, 468
Bst6I CTCTTC 3 cut(s) 1138, 1175, 1271
BstAFI CTTAAG 1 cut(s) 616
BstAPI GCANNNNNTGC 1 cut(s) 1544
BstBAI YACGTR 1 cut(s) 1563
BstC8I GCNNGC 8 cut(s) 60, 563, 1425, 1461, 1518, 1549, 2067, 2071
BstDEI CTNAG 8 cut(s) 117, 228, 256, 356, 673, 1626, 1791, 2082
BstDSI CCRYGG 2 cut(s) 1269, 1985
BstEII GGTNACC 1 cut(s) 1684
BstENI CCTNNNNNAGG 2 cut(s) 136, 1571
BstFNI CGCG 4 cut(s) 594, 1718, 1987, 2069
BstH2I RGCGCY 2 cut(s) 206, 413
BstHHI GCGC 3 cut(s) 205, 412, 596
BstMAI GTCTC 5 cut(s) 838, 1019, 1338, 1499, 1592
BstMCI CGRYCG 2 cut(s) 79, 1119
BstMWI GCNNNNNNNGC 8 cut(s) 26, 59, 451, 571, 1318, 1420, 1544, 1796
BstNI CCWGG 6 cut(s) 285, 457, 938, 956, 1170, 1253
BstNSI RCATGY 2 cut(s) 928, 1330
BstPAI GACNNNNGTC 1 cut(s) 1306
BstPI GGTNACC 1 cut(s) 1684
BstSFI CTRYAG 1 cut(s) 464
BstSLI GKGCMC 1 cut(s) 1522
BstSNI TACGTA 1 cut(s) 1563
BstUI CGCG 4 cut(s) 594, 1718, 1987, 2069
BstV1I GCAGC 9 cut(s) 399, 438, 757, 1072, 1774, 1894, 1897, 1967, 2041
BstV2I GAAGAC 2 cut(s) 39, 951
BstX2I RGATCY 3 cut(s) 128, 191, 2050
BstYI RGATCY 3 cut(s) 128, 191, 2050
BstZ17I GTATAC 1 cut(s) 766
Bsu36I CCTNAGG 1 cut(s) 228
BsuI GTATCC 1 cut(s) 1010
BsuRI GGCC 8 cut(s) 20, 361, 438, 545, 574, 1251, 1463, 1925
BtgI CCRYGG 2 cut(s) 1269, 1985
BtgZI GCGATG 1 cut(s) 1167
BtsIMutI CAGTG 2 cut(s) 858, 1005
BtuMI TCGCGA 1 cut(s) 2069
BveI ACCTGC 1 cut(s) 1588
Cac8I GCNNGC 8 cut(s) 60, 563, 1425, 1461, 1518, 1549, 2067, 2071
CciI TCATGA 1 cut(s) 1932
CfoI GCGC 3 cut(s) 205, 412, 596
Cfr10I RCCGGY 6 cut(s) 78, 1114, 1197, 1247, 1345, 2044
Cfr13I GGNCC 5 cut(s) 165, 267, 1301, 1416, 1461
Cfr42I CCGCGG 1 cut(s) 1988
Cfr9I CCCGGG 3 cut(s) 397, 759, 1500
CspAI ACCGGT 2 cut(s) 78, 1345
CviAII CATG 9 cut(s) 319, 547, 925, 1327, 1420, 1613, 1806, 1856, 1933
DdeI CTNAG 8 cut(s) 117, 228, 256, 356, 673, 1626, 1791, 2082
EaeI YGGCCR 2 cut(s) 543, 1249
Eam1104I CTCTTC 3 cut(s) 1138, 1175, 1271
EarI CTCTTC 3 cut(s) 1138, 1175, 1271
Eco105I TACGTA 1 cut(s) 1563
Eco130I CCWWGG 3 cut(s) 15, 245, 433
Eco147I AGGCCT 2 cut(s) 361, 438
Eco24I GRGCYC 2 cut(s) 672, 1883
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 4 cut(s) 165, 267, 1301, 1416
Eco57I CTGAAG 2 cut(s) 1454, 1589
Eco81I CCTNAGG 1 cut(s) 228
Eco88I CYCGRG 4 cut(s) 397, 759, 1500, 1767
Eco91I GGTNACC 1 cut(s) 1684
EcoNI CCTNNNNNAGG 2 cut(s) 136, 1571
EcoO65I GGTNACC 1 cut(s) 1684
EcoRI GAATTC 1 cut(s) 587
EcoRII CCWGG 6 cut(s) 283, 455, 936, 954, 1168, 1251
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 3 cut(s) 15, 245, 433
EcoT38I GRGCYC 2 cut(s) 672, 1883
ErhI CCWWGG 3 cut(s) 15, 245, 433
FaeI CATG 9 cut(s) 322, 550, 928, 1330, 1423, 1616, 1809, 1859, 1936
FalI AAGNNNNNCTT 2 cut(s) 1149, 1181
FaqI GGGAC 7 cut(s) 178, 280, 566, 1250, 1314, 1784, 2004
FatI CATG 9 cut(s) 318, 546, 924, 1326, 1419, 1612, 1805, 1855, 1932
FauI CCCGC 5 cut(s) 22, 1452, 1485, 1509, 1980
FbaI TGATCA 1 cut(s) 1929
FblI GTMKAC 1 cut(s) 765
FriOI GRGCYC 2 cut(s) 672, 1883
FspBI CTAG 6 cut(s) 138, 246, 657, 833, 839, 1967
GlaI GCGC 3 cut(s) 204, 411, 595
GsuI CTGGAG 5 cut(s) 393, 977, 1019, 1652, 1850
HaeII RGCGCY 2 cut(s) 206, 413
HaeIII GGCC 8 cut(s) 20, 361, 438, 545, 574, 1251, 1463, 1925
HhaI GCGC 3 cut(s) 205, 412, 596
Hin1II CATG 9 cut(s) 322, 550, 928, 1330, 1423, 1616, 1809, 1859, 1936
Hin6I GCGC 3 cut(s) 203, 410, 594
HinP1I GCGC 3 cut(s) 203, 410, 594
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HphI GGTGA 5 cut(s) 188, 307, 1075, 1612, 1768
Hpy166II GTNNAC 6 cut(s) 252, 262, 507, 601, 766, 1534
Hpy188I TCNGA 5 cut(s) 151, 513, 736, 1680, 1777
Hpy188III TCNNGA 9 cut(s) 1137, 1235, 1769, 1829, 1916, 1933, 1997, 2020, 2068
Hpy8I GTNNAC 6 cut(s) 252, 262, 507, 601, 766, 1534
Hpy99I CGWCG 7 cut(s) 40, 173, 499, 1124, 1214, 1494, 1713
HpyCH4III ACNGT 2 cut(s) 271, 468
HpyCH4IV ACGT 1 cut(s) 1562
HpyCH4V TGCA 3 cut(s) 415, 518, 1612
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 59, 451, 571, 1318, 1420, 1544, 1796
HpyF3I CTNAG 8 cut(s) 117, 228, 256, 356, 673, 1626, 1791, 2082
HpySE526I ACGT 1 cut(s) 1562
Hsp92II CATG 9 cut(s) 322, 550, 928, 1330, 1423, 1616, 1809, 1859, 1936
HspAI GCGC 3 cut(s) 203, 410, 594
KpnI GGTACC 2 cut(s) 642, 1966
Ksp22I TGATCA 1 cut(s) 1929
KspI CCGCGG 1 cut(s) 1988
LmnI GCTCC 5 cut(s) 88, 432, 983, 1045, 1720
Lsp1109I GCAGC 9 cut(s) 399, 438, 757, 1072, 1774, 1894, 1897, 1967, 2041
LweI GCATC 6 cut(s) 16, 243, 471, 1027, 1534, 1687
MaeI CTAG 6 cut(s) 138, 246, 657, 833, 839, 1967
MaeII ACGT 1 cut(s) 1562
MaeIII GTNAC 6 cut(s) 211, 275, 676, 1045, 1081, 1684
MbiI CCGCTC 2 cut(s) 1315, 2065
MfeI CAATTG 2 cut(s) 1373, 1539
MflI RGATCY 3 cut(s) 128, 191, 2050
MhlI GDGCHC 4 cut(s) 672, 1522, 1768, 1883
MlsI TGGCCA 1 cut(s) 545
MluCI AATT 6 cut(s) 5, 110, 587, 1373, 1539, 1979
MluNI TGGCCA 1 cut(s) 545
MlyI GAGTC 7 cut(s) 502, 840, 1316, 1655, 1669, 1766, 1802
MmeI TCCRAC 1 cut(s) 720
Mox20I TGGCCA 1 cut(s) 545
MscI TGGCCA 1 cut(s) 545
MseI TTAA 2 cut(s) 617, 1368
MslI CAYNNNNRTG 2 cut(s) 317, 929
Msp20I TGGCCA 1 cut(s) 545
MspA1I CMGCKG 3 cut(s) 451, 1145, 1987
MspCI CTTAAG 1 cut(s) 616
MunI CAATTG 2 cut(s) 1373, 1539
Mva1269I GAATGC 1 cut(s) 520
MvaI CCWGG 6 cut(s) 285, 457, 938, 956, 1170, 1253
MvnI CGCG 4 cut(s) 594, 1718, 1987, 2069
MwoI GCNNNNNNNGC 8 cut(s) 26, 59, 451, 571, 1318, 1420, 1544, 1796
NlaIII CATG 9 cut(s) 322, 550, 928, 1330, 1423, 1616, 1809, 1859, 1936
NmuCI GTSAC 3 cut(s) 211, 275, 1081
NruI TCGCGA 1 cut(s) 2069
NspI RCATGY 2 cut(s) 928, 1330
PagI TCATGA 1 cut(s) 1932
PaqCI CACCTGC 1 cut(s) 1588
PceI AGGCCT 2 cut(s) 361, 438
PciI ACATGT 1 cut(s) 924
PctI GAATGC 1 cut(s) 520
PfeI GAWTC 5 cut(s) 388, 804, 1265, 1486, 1713
PflMI CCANNNNNTGG 2 cut(s) 919, 1806
PfoI TCCNGGA 2 cut(s) 1096, 1297
PinAI ACCGGT 2 cut(s) 78, 1345
PleI GAGTC 7 cut(s) 502, 840, 1315, 1654, 1669, 1766, 1801
PpsI GAGTC 7 cut(s) 502, 840, 1315, 1654, 1669, 1766, 1801
Ppu21I YACGTR 1 cut(s) 1563
PscI ACATGT 1 cut(s) 924
PshAI GACNNNNGTC 1 cut(s) 1306
Psp6I CCWGG 6 cut(s) 283, 455, 936, 954, 1168, 1251
PspEI GGTNACC 1 cut(s) 1684
PspGI CCWGG 6 cut(s) 283, 455, 936, 954, 1168, 1251
PspPI GGNCC 5 cut(s) 165, 267, 1301, 1416, 1461
PsrI GAACNNNNNNTAC 2 cut(s) 591, 623
PsuI RGATCY 3 cut(s) 128, 191, 2050
RruI TCGCGA 1 cut(s) 2069
RseI CAYNNNNRTG 2 cut(s) 317, 929
SacII CCGCGG 1 cut(s) 1988
SaqAI TTAA 2 cut(s) 617, 1368
Sau96I GGNCC 5 cut(s) 165, 267, 1301, 1416, 1461
SchI GAGTC 7 cut(s) 502, 840, 1316, 1655, 1669, 1766, 1802
SduI GDGCHC 4 cut(s) 672, 1522, 1768, 1883
SfaNI GCATC 6 cut(s) 16, 243, 471, 1027, 1534, 1687
SfcI CTRYAG 1 cut(s) 464
Sfr303I CCGCGG 1 cut(s) 1988
SgrBI CCGCGG 1 cut(s) 1988
SinI GGWCC 4 cut(s) 165, 267, 1301, 1416
SmaI CCCGGG 3 cut(s) 399, 761, 1502
SmiMI CAYNNNNRTG 2 cut(s) 317, 929
SmlI CTYRAG 5 cut(s) 365, 616, 1724, 1914, 1997
SmoI CTYRAG 5 cut(s) 365, 616, 1724, 1914, 1997
SnaBI TACGTA 1 cut(s) 1563
Sse9I AATT 6 cut(s) 5, 110, 587, 1373, 1539, 1979
SseBI AGGCCT 2 cut(s) 361, 438
SspI AATATT 2 cut(s) 531, 1078
SspMI CTAG 6 cut(s) 138, 246, 657, 833, 839, 1967
StuI AGGCCT 2 cut(s) 361, 438
StyI CCWWGG 3 cut(s) 15, 245, 433
TaaI ACNGT 2 cut(s) 271, 468
TaiI ACGT 1 cut(s) 1565
TaqI TCGA 6 cut(s) 75, 134, 497, 523, 1056, 1138
TaqII GACCGA 1 cut(s) 182
TasI AATT 6 cut(s) 5, 110, 587, 1373, 1539, 1979
TatI WGTACW 4 cut(s) 259, 598, 612, 1872
TauI GCSGC 5 cut(s) 574, 656, 1315, 1703, 2029
TfiI GAWTC 5 cut(s) 388, 804, 1265, 1486, 1713
Tru1I TTAA 2 cut(s) 617, 1368
Tru9I TTAA 2 cut(s) 617, 1368
TscAI CASTG 2 cut(s) 858, 1012
TseFI GTSAC 3 cut(s) 211, 275, 1081
TseI GCWGC 9 cut(s) 412, 451, 770, 1060, 1787, 1907, 1910, 1955, 2029
Tsp45I GTSAC 3 cut(s) 211, 275, 1081
TspDTI ATGAA 7 cut(s) 600, 717, 796, 1170, 1416, 1949, 1986
TspGWI ACGGA 2 cut(s) 970, 1258
TspMI CCCGGG 3 cut(s) 397, 759, 1500
TspRI CASTG 2 cut(s) 858, 1012
Van91I CCANNNNNTGG 2 cut(s) 919, 1806
Vha464I CTTAAG 1 cut(s) 616
VpaK11BI GGWCC 4 cut(s) 165, 267, 1301, 1416
XagI CCTNNNNNAGG 2 cut(s) 136, 1571
XapI RAATTY 2 cut(s) 587, 1979
XceI RCATGY 2 cut(s) 928, 1330
XmaI CCCGGG 3 cut(s) 397, 759, 1500
XmaJI CCTAGG 1 cut(s) 245
XmiI GTMKAC 1 cut(s) 765
XspI CTAG 6 cut(s) 138, 246, 657, 833, 839, 1967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.