Rmu_sc0001563.1_g000018

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001563.1
OG0000087
Physical Location & Seq
Reverse (-)
75205 .. 78563
3359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001563.1_g000018.1.cds

Sequence Viewer

Length: 2268 bp
atggggtggagagagcttggctccgatacgcgatggggtagaaaatttgagcctccggtacccaatggggtgtttggcactagtgtgcctataggtagtcccccaagttccctcagaagagaaatcttgagcgggctacgttgtagagagcttggcttcgatacccgatggggtagatactttgaatctctggtacccgatgggcgatcctacggcagagggcgtttcggtttcgacggtcctgatgcattggaggttgaatttaagagggaaactgactgttttccctcacttttggcgaaaaagaagctcgagagacttggaaggtttgcagccaaagacaaggagaaccaagggagaattgtgagtgcctgtggagtgagatcgatcgtctgccgagatatagcaagatttgaggtccccggtaccgtaattaggatggaatcagaagccaggggtggggatacgggatcgtcataccagtcttctgccaggcaagctgaagtggacatcgaccgtagtggggaatccgacgagggtgagagtgagggcgggtctgcggaggctccggtagtcacagtggccattccagagggcattcctaagctgaggtacacgcttgcggacgggacagtatgcgacgaacctgggagtagcatgacgatgaaggagatcgtagacatgcggctgaagtgggggataccggacgcagtagagcttaggccacttaggaatggggagatggctgcgaatcctgccccggggtgggtggtgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgtcgttcgccaaatatatagtatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcggtgcaccgggtattgtactcaaggaagcagtcttgtgcgggtacggtgccctttgccgctagggattacgagccgctagttaccgatatgcctacctggaggagcaaaaggtggaggaaccacgagtgcctagctggtgggcagtggcagataaaaaataagaagtggcagctgaccgtgaaagccccgaagaggaaaccccggaaaggcaaggaagaggacaggatggatgacgctcaactgatggacatgctgatgagccagggagcagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtccattgaggagacccttttggagataaccgatgagggatacggtgaacctgatccctacgctcctgtggcccacgccgtgcagccctccatggccgatgtcattacgatagatgacaccggaatgggaaaagaaacggcctcagtgcctatttcttctcgttctactgggagcgatgaggcgttactccccggtgagaagaagagatcccacaagcaccggcatcgaactgataaggaggtgacgtacactggcccggatgtccagggtactggtgcaaaaaggcaaaagaaagatcacccgggatcagggccatcgccttctcttggcctgttatctcccaccattccggtaatccccaagaagcccaacaagcagctgctgaatgaatacggtgttgccgatgaaaagtttgtgcggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggtgaagtaccttcatggcgagaagtccaagctggagaaggagcgggactcgttgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggaggagataaagaaggcccgggactccgagaagaaggctgcaaagtctgccgtctcatggaaggagaaggcagattctctagaggatcgcctacccgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctccatgctggctgctgcccaagacaaggctgtcatcatgaagtttaaggagtgggtggcggccgggtatttagatgagaccaaatttaggcggggtctcctggagaaaggaaaaaagagcaggaggcggcgggcaagtccggtgccggtgggtctcagagtaccgatggagatcggcttttgtgaattggaacatccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

755

Amino Acids

84.41

Weight (kDa)

8.65

Isoelectric Point (pI)

48.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2096
AatII GACGTC 1 cut(s) 1251
Acc65I GGTACC 3 cut(s) 58, 193, 425
AccB1I GGYRCC 6 cut(s) 58, 193, 425, 822, 1006, 2209
AccBSI CCGCTC 2 cut(s) 132, 1843
AccI GTMKAC 2 cut(s) 678, 1251
AccII CGCG 5 cut(s) 31, 957, 959, 1918, 2018
AclWI GGATC 7 cut(s) 201, 478, 1325, 1479, 1591, 1719, 2013
AcoI YGGCCR 5 cut(s) 582, 906, 1371, 1866, 2127
AcsI RAATTY 3 cut(s) 44, 260, 2150
AcuI CTGAAG 3 cut(s) 522, 710, 1736
AcyI GRCGYC 1 cut(s) 1248
AdeI CACNNNGTG 1 cut(s) 1357
AgsI TTSAA 2 cut(s) 185, 260
AhdI GACNNNNNGTC 1 cut(s) 1258
AhlI ACTAGT 1 cut(s) 80
AjnI CCWGG 8 cut(s) 452, 491, 646, 1055, 1221, 1542, 1761, 2166
AleI CACNNNNGTG 1 cut(s) 83
Alw21I GWGCWC 1 cut(s) 966
Alw26I GTCTC 7 cut(s) 310, 1283, 1781, 1978, 2138, 2168, 2225
Alw44I GTGCAC 1 cut(s) 962
AlwI GGATC 7 cut(s) 201, 478, 1325, 1479, 1591, 1719, 2013
AlwNI CAGNNNCTG 2 cut(s) 835, 1660
Ama87I CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
ApaLI GTGCAC 1 cut(s) 962
ApoI RAATTY 3 cut(s) 44, 260, 2150
Asp718I GGTACC 3 cut(s) 58, 193, 425
AspA2I CCTAGG 1 cut(s) 1255
AspLEI GCGC 2 cut(s) 959, 1918
AspS9I GGNCC 9 cut(s) 239, 418, 916, 1278, 1348, 1532, 1589, 1698, 1936
AsuHPI GGTGA 8 cut(s) 551, 849, 1334, 1484, 1531, 1568, 1813, 1913
AvaI CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
AvaII GGWCC 5 cut(s) 239, 418, 916, 1278, 1698
AvrII CCTAGG 1 cut(s) 1255
BaeGI GKGCMC 2 cut(s) 966, 1011
BalI TGGCCA 2 cut(s) 584, 908
BanI GGYRCC 6 cut(s) 58, 193, 425, 822, 1006, 2209
BauI CACGAG 4 cut(s) 779, 1082, 1270, 2027
BbsI GAAGAC 1 cut(s) 477
Bbv12I GWGCWC 1 cut(s) 966
BbvCI CCTCAGC 2 cut(s) 608, 1911
BceAI ACGGC 6 cut(s) 229, 1340, 1431, 1758, 1955, 2018
BcgI CGANNNNNNTGC 2 cut(s) 1484, 1518
BciT130I CCWGG 8 cut(s) 454, 493, 648, 1057, 1223, 1544, 1763, 2168
BciVI GTATCC 3 cut(s) 457, 693, 1310
BcoDI GTCTC 7 cut(s) 310, 1283, 1781, 1978, 2138, 2168, 2225
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 6 cut(s) 81, 1020, 1037, 1091, 1256, 2000
BfmI CTRYAG 2 cut(s) 90, 827
BfuI GTATCC 3 cut(s) 457, 693, 1310
BlnI CCTAGG 1 cut(s) 1255
Bme18I GGWCC 5 cut(s) 239, 418, 916, 1278, 1698
BmeRI GACNNNNNGTC 1 cut(s) 1258
BmeT110I CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
BmgT120I GGNCC 9 cut(s) 239, 418, 916, 1278, 1348, 1532, 1589, 1698, 1936
BmrI ACTGGG 1 cut(s) 1455
BmsI GCATC 5 cut(s) 235, 834, 1222, 1510, 1785
BmuI ACTGGG 1 cut(s) 1455
BpiI GAAGAC 1 cut(s) 477
BplI GAGNNNNNCTC 5 cut(s) 37, 1832, 1864, 2051, 2083
BpmI CTGGAG 3 cut(s) 1078, 1853, 2189
Bpu10I CCTNAGC 4 cut(s) 603, 608, 719, 1911
BpuEI CTTGAG 3 cut(s) 148, 964, 1916
Bsa29I ATCGAT 1 cut(s) 386
BsaBI GATNNNNATC 1 cut(s) 2237
BsaHI GRCGYC 1 cut(s) 1248
BsaI GGTCTC 4 cut(s) 1283, 2138, 2168, 2225
BsaWI WCCGGW 6 cut(s) 55, 568, 703, 1397, 1627, 2206
BsaXI ACNNNNNCTCC 4 cut(s) 1508, 1538, 2033, 2063
Bse118I RCCGGY 2 cut(s) 1497, 2212
Bse1I ACTGG 4 cut(s) 481, 1450, 1534, 1555
Bse8I GATNNNNATC 1 cut(s) 2237
BseBI CCWGG 8 cut(s) 454, 493, 648, 1057, 1223, 1544, 1763, 2168
BseCI ATCGAT 1 cut(s) 386
BseGI GGATG 7 cut(s) 444, 849, 1191, 1195, 1543, 2062, 2260
BseJI GATNNNNATC 1 cut(s) 2237
BseMII CTCAG 6 cut(s) 127, 599, 1434, 1851, 1902, 2236
BseNI ACTGG 4 cut(s) 481, 1450, 1534, 1555
BseRI GAGGAG 4 cut(s) 1075, 1301, 1937, 2054
BseSI GKGCMC 2 cut(s) 966, 1011
BseX3I CGGCCG 1 cut(s) 2127
BsgI GTGCAG 3 cut(s) 761, 1223, 1379
Bsh1236I CGCG 5 cut(s) 31, 957, 959, 1918, 2018
Bsh1285I CGRYCG 4 cut(s) 390, 517, 1735, 2130
BshNI GGYRCC 6 cut(s) 58, 193, 425, 822, 1006, 2209
BshVI ATCGAT 1 cut(s) 386
BsiEI CGRYCG 4 cut(s) 390, 517, 1735, 2130
BsiHKAI GWGCWC 1 cut(s) 966
BsiHKCI CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
BslFI GGGAC 6 cut(s) 84, 404, 643, 929, 1859, 1955
BsmAI GTCTC 7 cut(s) 310, 1283, 1781, 1978, 2138, 2168, 2225
BsmBI CGTCTC 2 cut(s) 1781, 1978
BsmFI GGGAC 6 cut(s) 84, 404, 643, 929, 1859, 1955
BsmI GAATGC 1 cut(s) 597
Bso31I GGTCTC 4 cut(s) 1283, 2138, 2168, 2225
BsoBI CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
Bsp1286I GDGCHC 2 cut(s) 966, 1011
Bsp19I CCATGG 1 cut(s) 1368
BspCNI CTCAG 6 cut(s) 126, 600, 1433, 1852, 1903, 2235
BspDI ATCGAT 1 cut(s) 386
BspFNI CGCG 5 cut(s) 31, 957, 959, 1918, 2018
BspHI TCATGA 1 cut(s) 2103
BspPI GGATC 7 cut(s) 201, 478, 1325, 1479, 1591, 1719, 2013
BspT107I GGYRCC 6 cut(s) 58, 193, 425, 822, 1006, 2209
BspTNI GGTCTC 4 cut(s) 1283, 2138, 2168, 2225
BsrBI CCGCTC 2 cut(s) 132, 1843
BsrFI RCCGGY 2 cut(s) 1497, 2212
BsrI ACTGG 4 cut(s) 481, 1450, 1534, 1555
BssAI RCCGGY 2 cut(s) 1497, 2212
BssNI GRCGYC 1 cut(s) 1248
BssSI CACGAG 4 cut(s) 779, 1082, 1270, 2027
BssT1I CCWWGG 4 cut(s) 352, 796, 1255, 1368
Bst2BI CACGAG 4 cut(s) 779, 1082, 1270, 2027
Bst2UI CCWGG 8 cut(s) 454, 493, 648, 1057, 1223, 1544, 1763, 2168
Bst6I CTCTTC 4 cut(s) 112, 1145, 1170, 1475
BstACI GRCGYC 1 cut(s) 1248
BstAPI GCANNNNNTGC 1 cut(s) 1967
BstC8I GCNNGC 6 cut(s) 134, 498, 621, 926, 2076, 2199
BstDSI CCRYGG 3 cut(s) 1368, 2016, 2034
BstF5I GGATG 7 cut(s) 444, 849, 1191, 1195, 1543, 2062, 2260
BstFNI CGCG 5 cut(s) 31, 957, 959, 1918, 2018
BstHHI GCGC 2 cut(s) 959, 1918
BstMAI GTCTC 7 cut(s) 310, 1283, 1781, 1978, 2138, 2168, 2225
BstMCI CGRYCG 4 cut(s) 390, 517, 1735, 2130
BstNI CCWGG 8 cut(s) 454, 493, 648, 1057, 1223, 1544, 1763, 2168
BstNSI RCATGY 2 cut(s) 685, 1213
BstSFI CTRYAG 2 cut(s) 90, 827
BstSLI GKGCMC 2 cut(s) 966, 1011
BstUI CGCG 5 cut(s) 31, 957, 959, 1918, 2018
BstV2I GAAGAC 1 cut(s) 477
BstX2I RGATCY 2 cut(s) 1484, 1711
BstXI CCANNNNNNTGG 1 cut(s) 1550
BstYI RGATCY 2 cut(s) 1484, 1711
BstZI CGGCCG 1 cut(s) 2127
Bsu15I ATCGAT 1 cut(s) 386
BsuI GTATCC 3 cut(s) 457, 693, 1310
BsuTUI ATCGAT 1 cut(s) 386
BtgI CCRYGG 3 cut(s) 1368, 2016, 2034
BtgZI GCGATG 3 cut(s) 46, 1467, 1578
BtsCI GGATG 7 cut(s) 444, 849, 1191, 1195, 1543, 2062, 2260
BtsI GCAGTG 1 cut(s) 1109
BtsIMutI CAGTG 4 cut(s) 585, 1109, 1428, 1527
Cac8I GCNNGC 6 cut(s) 134, 498, 621, 926, 2076, 2199
CaiI CAGNNNCTG 2 cut(s) 835, 1660
CciI TCATGA 1 cut(s) 2103
CfoI GCGC 2 cut(s) 959, 1918
Cfr10I RCCGGY 2 cut(s) 1497, 2212
Cfr13I GGNCC 9 cut(s) 239, 418, 916, 1278, 1348, 1532, 1589, 1698, 1936
Cfr42I CCGCGG 1 cut(s) 2019
Cfr9I CCCGGG 4 cut(s) 760, 1579, 1782, 1938
ClaI ATCGAT 1 cut(s) 386
CseI GACGC 2 cut(s) 716, 1202
DraIII CACNNNGTG 1 cut(s) 1357
DrdI GACNNNNNNGTC 1 cut(s) 2096
DriI GACNNNNNGTC 1 cut(s) 1258
DseDI GACNNNNNNGTC 1 cut(s) 2096
EaeI YGGCCR 5 cut(s) 582, 906, 1371, 1866, 2127
EagI CGGCCG 1 cut(s) 2127
Eam1104I CTCTTC 4 cut(s) 112, 1145, 1170, 1475
Eam1105I GACNNNNNGTC 1 cut(s) 1258
EarI CTCTTC 4 cut(s) 112, 1145, 1170, 1475
EclXI CGGCCG 1 cut(s) 2127
Eco130I CCWWGG 4 cut(s) 352, 796, 1255, 1368
Eco31I GGTCTC 4 cut(s) 1283, 2138, 2168, 2225
Eco32I GATATC 1 cut(s) 1723
Eco47I GGWCC 5 cut(s) 239, 418, 916, 1278, 1698
Eco52I CGGCCG 1 cut(s) 2127
Eco57I CTGAAG 3 cut(s) 522, 710, 1736
Eco88I CYCGRG 5 cut(s) 311, 760, 1579, 1782, 1938
EcoO109I RGGNCCY 2 cut(s) 418, 916
EcoRII CCWGG 8 cut(s) 452, 491, 646, 1055, 1221, 1542, 1761, 2166
EcoRV GATATC 1 cut(s) 1723
EcoT14I CCWWGG 4 cut(s) 352, 796, 1255, 1368
EcoT22I ATGCAT 1 cut(s) 250
ErhI CCWWGG 4 cut(s) 352, 796, 1255, 1368
Esp3I CGTCTC 2 cut(s) 1781, 1978
FaqI GGGAC 6 cut(s) 84, 404, 643, 929, 1859, 1955
FauI CCCGC 9 cut(s) 125, 545, 991, 1791, 1836, 1911, 2023, 2151, 2190
FblI GTMKAC 2 cut(s) 678, 1251
FokI GGATG 7 cut(s) 451, 856, 1198, 1202, 1550, 2069, 2247
FspBI CTAG 6 cut(s) 81, 1020, 1037, 1091, 1256, 2000
GlaI GCGC 2 cut(s) 958, 1917
GsuI CTGGAG 3 cut(s) 1078, 1853, 2189
HgaI GACGC 2 cut(s) 716, 1202
HhaI GCGC 2 cut(s) 959, 1918
Hin1I GRCGYC 1 cut(s) 1248
Hin6I GCGC 2 cut(s) 957, 1916
HinP1I GCGC 2 cut(s) 957, 1916
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HphI GGTGA 8 cut(s) 551, 849, 1334, 1484, 1531, 1568, 1813, 1913
Hpy166II GTNNAC 7 cut(s) 508, 615, 679, 964, 1252, 1325, 1527
Hpy188I TCNGA 8 cut(s) 25, 116, 448, 532, 1716, 1948, 2056, 2225
Hpy188III TCNNGA 6 cut(s) 127, 242, 313, 590, 2000, 2104
Hpy8I GTNNAC 7 cut(s) 508, 615, 679, 964, 1252, 1325, 1527
Hpy99I CGWCG 5 cut(s) 239, 536, 644, 1250, 1253
HpyCH4IV ACGT 3 cut(s) 139, 1248, 1523
HpyCH4V TGCA 8 cut(s) 248, 332, 778, 964, 1240, 1360, 1556, 1961
HpySE526I ACGT 3 cut(s) 139, 1248, 1523
Hsp92I GRCGYC 1 cut(s) 1248
HspAI GCGC 2 cut(s) 957, 1916
KpnI GGTACC 3 cut(s) 62, 197, 429
KspI CCGCGG 1 cut(s) 2019
LmnI GCTCC 9 cut(s) 26, 571, 795, 1062, 1226, 1345, 1449, 1840, 1891
LweI GCATC 5 cut(s) 235, 834, 1222, 1510, 1785
MaeI CTAG 6 cut(s) 81, 1020, 1037, 1091, 1256, 2000
MaeII ACGT 3 cut(s) 139, 1248, 1523
MaeIII GTNAC 5 cut(s) 574, 855, 1039, 1461, 1519
MbiI CCGCTC 2 cut(s) 132, 1843
MboII GAAGA 8 cut(s) 129, 477, 1162, 1187, 1425, 1489, 1492, 1963
MflI RGATCY 2 cut(s) 1484, 1711
MhlI GDGCHC 2 cut(s) 966, 1011
MlsI TGGCCA 2 cut(s) 584, 908
MluCI AATT 6 cut(s) 44, 260, 360, 432, 2150, 2252
MluNI TGGCCA 2 cut(s) 584, 908
MlyI GAGTC 3 cut(s) 1282, 1841, 1937
MmeI TCCRAC 1 cut(s) 555
Mox20I TGGCCA 2 cut(s) 584, 908
Mph1103I ATGCAT 1 cut(s) 250
MscI TGGCCA 2 cut(s) 584, 908
MseI TTAA 2 cut(s) 264, 2112
MslI CAYNNNNRTG 4 cut(s) 83, 662, 1214, 1400
Msp20I TGGCCA 2 cut(s) 584, 908
MspA1I CMGCKG 5 cut(s) 868, 1132, 1657, 1882, 2018
Mva1269I GAATGC 1 cut(s) 597
MvaI CCWGG 8 cut(s) 454, 493, 648, 1057, 1223, 1544, 1763, 2168
MvnI CGCG 5 cut(s) 31, 957, 959, 1918, 2018
NcoI CCATGG 1 cut(s) 1368
NmeAIII GCCGAG 1 cut(s) 422
NmuCI GTSAC 3 cut(s) 574, 855, 1519
NsiI ATGCAT 1 cut(s) 250
NspI RCATGY 2 cut(s) 685, 1213
OliI CACNNNNGTG 1 cut(s) 83
PaeR7I CTCGAG 1 cut(s) 311
PagI TCATGA 1 cut(s) 2103
PcsI WCGNNNNNNNCGW 2 cut(s) 1268, 1677
PctI GAATGC 1 cut(s) 597
PfeI GAWTC 8 cut(s) 185, 443, 527, 751, 784, 1768, 1787, 1994
PfoI TCCNGGA 1 cut(s) 2166
Ple19I CGATCG 1 cut(s) 390
PleI GAGTC 3 cut(s) 1281, 1841, 1937
PpsI GAGTC 3 cut(s) 1281, 1841, 1937
PpuMI RGGWCCY 2 cut(s) 418, 916
Psp5II RGGWCCY 2 cut(s) 418, 916
Psp6I CCWGG 8 cut(s) 452, 491, 646, 1055, 1221, 1542, 1761, 2166
PspGI CCWGG 8 cut(s) 452, 491, 646, 1055, 1221, 1542, 1761, 2166
PspPI GGNCC 9 cut(s) 239, 418, 916, 1278, 1348, 1532, 1589, 1698, 1936
PspPPI RGGWCCY 2 cut(s) 418, 916
PstNI CAGNNNCTG 2 cut(s) 835, 1660
PsuI RGATCY 2 cut(s) 1484, 1711
PvuI CGATCG 1 cut(s) 390
PvuII CAGCTG 3 cut(s) 868, 1132, 1657
RseI CAYNNNNRTG 4 cut(s) 83, 662, 1214, 1400
SacII CCGCGG 1 cut(s) 2019
SalI GTCGAC 1 cut(s) 1250
SaqAI TTAA 2 cut(s) 264, 2112
Sau96I GGNCC 9 cut(s) 239, 418, 916, 1278, 1348, 1532, 1589, 1698, 1936
SchI GAGTC 3 cut(s) 1282, 1841, 1937
SduI GDGCHC 2 cut(s) 966, 1011
SfaNI GCATC 5 cut(s) 235, 834, 1222, 1510, 1785
SfcI CTRYAG 2 cut(s) 90, 827
Sfr274I CTCGAG 1 cut(s) 311
Sfr303I CCGCGG 1 cut(s) 2019
SgrBI CCGCGG 1 cut(s) 2019
SinI GGWCC 5 cut(s) 239, 418, 916, 1278, 1698
SlaI CTCGAG 1 cut(s) 311
SmaI CCCGGG 4 cut(s) 762, 1581, 1784, 1940
SmiMI CAYNNNNRTG 4 cut(s) 83, 662, 1214, 1400
SmlI CTYRAG 4 cut(s) 127, 311, 979, 1895
SmoI CTYRAG 4 cut(s) 127, 311, 979, 1895
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 6 cut(s) 44, 260, 360, 432, 2150, 2252
SspMI CTAG 6 cut(s) 81, 1020, 1037, 1091, 1256, 2000
StyI CCWWGG 4 cut(s) 352, 796, 1255, 1368
TaiI ACGT 3 cut(s) 142, 1251, 1526
TaqII GACCGA 1 cut(s) 1266
TasI AATT 6 cut(s) 44, 260, 360, 432, 2150, 2252
TatI WGTACW 2 cut(s) 975, 2043
TauI GCSGC 6 cut(s) 688, 1019, 1036, 1871, 2129, 2197
TfiI GAWTC 8 cut(s) 185, 443, 527, 751, 784, 1768, 1787, 1994
Tru1I TTAA 2 cut(s) 264, 2112
Tru9I TTAA 2 cut(s) 264, 2112
TscAI CASTG 4 cut(s) 585, 1109, 1428, 1534
TseFI GTSAC 3 cut(s) 574, 855, 1519
Tsp45I GTSAC 3 cut(s) 574, 855, 1519
TspDTI ATGAA 5 cut(s) 680, 1680, 1698, 1802, 2120
TspMI CCCGGG 4 cut(s) 760, 1579, 1782, 1938
TspRI CASTG 4 cut(s) 585, 1109, 1428, 1534
VneI GTGCAC 1 cut(s) 962
VpaK11BI GGWCC 5 cut(s) 239, 418, 916, 1278, 1698
XapI RAATTY 3 cut(s) 44, 260, 2150
XbaI TCTAGA 1 cut(s) 1999
XceI RCATGY 2 cut(s) 685, 1213
XhoI CTCGAG 1 cut(s) 311
XmaI CCCGGG 4 cut(s) 760, 1579, 1782, 1938
XmaJI CCTAGG 1 cut(s) 1255
XmiI GTMKAC 2 cut(s) 678, 1251
XspI CTAG 6 cut(s) 81, 1020, 1037, 1091, 1256, 2000
ZraI GACGTC 1 cut(s) 1249
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.