Rmu_ssc0000386.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000386.1
OG0000087
Physical Location & Seq
Forward (+)
18077 .. 19675
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000386.1_g000006.1.cds

Sequence Viewer

Length: 1200 bp
atgctgaacctgtcaccggggcagctgacaccgaatgccgttcgccaaatatacagaatgatggccatgtgggacttgtgtcaacaagggtggccttccataaacgagttccgcgctgtacatcgggtgctgtactcaaggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccactagttaccgacatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagattaaaaataagaagtggcagctgaccgtgaaagcgccgaagaggaaaccccggaaaggcaagcaggaggacagaatggatgatgcccaattgatggacatgctgatgggccagggggaagacgcccttcacatcgacgtcgacttagggtcgaaggtgacccacgtcgcgcagccctccatggccgatgttatcacgatagatgacaccgggatgggaaaagtaccggcccctgtgcctatttcctctcgttccactgggagcgatgaggcattactcccgggtgagaagaagagatcgcataggtaccgacatcggactgataaggaggtgatgtacactggcccggatgtccaaggtaccggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttcgcttggcctgttatctcccgccattccggtgatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatattgaccttgaccgggttcgggccaaggataatactccccaggagaatcgccgtcttgctcgggaatcaatgatgcaggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcagtctctccgggcacgtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactccttgagggcagagatggtcgccgctaagcagcgggttgcggagcttgagggtgaagttgctgaggcgcgggactccgagaaaaaggctgcagagtctgccatctcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

399

Amino Acids

45.01

Weight (kDa)

8.74

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 408
Acc65I GGTACC 2 cut(s) 573, 626
AccB1I GGYRCC 2 cut(s) 573, 626
AccB7I CCANNNNNTGG 2 cut(s) 361, 1116
AccBSI CCGCTC 1 cut(s) 1003
AccI GTMKAC 1 cut(s) 408
AccII CGCG 4 cut(s) 114, 437, 1078, 1157
AclWI GGATC 3 cut(s) 706, 798, 1152
AcoI YGGCCR 2 cut(s) 63, 450
AcuI CTGAAG 2 cut(s) 815, 950
AcvI CACGTG 1 cut(s) 961
AcyI GRCGYC 3 cut(s) 390, 405, 906
AgeI ACCGGT 1 cut(s) 629
AgsI TTSAA 1 cut(s) 889
AhdI GACNNNNNGTC 1 cut(s) 415
AhlI ACTAGT 1 cut(s) 193
AjiI CACGTC 1 cut(s) 433
AjnI CCWGG 3 cut(s) 378, 840, 1137
AluBI AGCT 6 cut(s) 25, 251, 289, 736, 991, 1054
AluI AGCT 6 cut(s) 25, 251, 289, 736, 991, 1054
Alw26I GTCTC 1 cut(s) 953
AlwI GGATC 3 cut(s) 706, 798, 1152
AlwNI CAGNNNCTG 1 cut(s) 1106
Ama87I CYCGRG 3 cut(s) 547, 658, 861
ApeKI GCWGC 6 cut(s) 22, 286, 439, 733, 1039, 1097
AsiGI ACCGGT 1 cut(s) 629
Asp718I GGTACC 2 cut(s) 573, 626
AspLEI GCGC 4 cut(s) 116, 304, 439, 1078
AspS9I GGNCC 6 cut(s) 376, 496, 611, 662, 777, 822
AsuHPI GGTGA 8 cut(s) 6, 175, 436, 563, 610, 647, 721, 1073
AvaI CYCGRG 3 cut(s) 547, 658, 861
AvaII GGWCC 2 cut(s) 662, 777
BaeGI GKGCMC 1 cut(s) 960
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 2 cut(s) 573, 626
BauI CACGAG 1 cut(s) 1166
BbrPI CACGTG 1 cut(s) 961
BbsI GAAGAC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 1071
BbvI GCAGC 6 cut(s) 34, 298, 451, 745, 1051, 1084
BccI CCATC 7 cut(s) 55, 355, 367, 475, 734, 1018, 1118
BceAI ACGGC 3 cut(s) 23, 837, 1157
BciT130I CCWGG 3 cut(s) 380, 842, 1139
BcoDI GTCTC 1 cut(s) 953
BcuI ACTAGT 1 cut(s) 193
BfaI CTAG 3 cut(s) 177, 194, 248
BfmI CTRYAG 1 cut(s) 1098
BfoI RGCGCY 1 cut(s) 305
BisI GCNGC 8 cut(s) 23, 174, 287, 440, 734, 1032, 1040, 1098
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 8 cut(s) 24, 175, 288, 441, 735, 1033, 1041, 1099
Bme18I GGWCC 2 cut(s) 662, 777
BmeRI GACNNNNNGTC 1 cut(s) 415
BmeT110I CYCGRG 3 cut(s) 547, 658, 861
BmgBI CACGTC 1 cut(s) 433
BmgT120I GGNCC 6 cut(s) 376, 496, 611, 662, 777, 822
BmiI GGNNCC 4 cut(s) 498, 575, 628, 663
BmrI ACTGGG 1 cut(s) 534
BmsI GCATC 2 cut(s) 340, 864
BmuI ACTGGG 1 cut(s) 534
BoxI GACNNNNGTC 3 cut(s) 78, 431, 667
BpiI GAAGAC 1 cut(s) 393
BplI GAGNNNNNCTC 2 cut(s) 992, 1024
BpmI CTGGAG 2 cut(s) 1013, 1160
Bpu10I CCTNAGC 1 cut(s) 1071
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuEI CTTGAG 3 cut(s) 121, 1033, 1076
BsaAI YACGTR 1 cut(s) 961
BsaBI GATNNNNATC 1 cut(s) 924
BsaHI GRCGYC 3 cut(s) 390, 405, 906
BsaWI WCCGGW 2 cut(s) 629, 706
BsaXI ACNNNNNCTCC 3 cut(s) 587, 617, 1172
Bse118I RCCGGY 2 cut(s) 493, 629
Bse1I ACTGG 2 cut(s) 529, 613
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 3 cut(s) 380, 842, 1139
BseGI GGATG 3 cut(s) 352, 486, 622
BseJI GATNNNNATC 1 cut(s) 924
BseMII CTCAG 1 cut(s) 1062
BseNI ACTGG 2 cut(s) 529, 613
BseRI GAGGAG 2 cut(s) 950, 1193
BseSI GKGCMC 1 cut(s) 960
BseXI GCAGC 6 cut(s) 34, 298, 451, 745, 1051, 1084
BseYI CCCAGC 1 cut(s) 251
Bsh1236I CGCG 4 cut(s) 114, 437, 1078, 1157
BshNI GGYRCC 2 cut(s) 573, 626
BshTI ACCGGT 1 cut(s) 629
BsiHKCI CYCGRG 3 cut(s) 547, 658, 861
BslFI GGGAC 4 cut(s) 86, 675, 1019, 1094
BsmAI GTCTC 1 cut(s) 953
BsmFI GGGAC 4 cut(s) 86, 675, 1019, 1094
BsmI GAATGC 1 cut(s) 40
BsoBI CYCGRG 3 cut(s) 547, 658, 861
Bsp1286I GDGCHC 1 cut(s) 960
Bsp1407I TGTACA 2 cut(s) 118, 603
Bsp143I GATC 5 cut(s) 563, 652, 711, 790, 1144
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 1 cut(s) 447
BspCNI CTCAG 1 cut(s) 1063
BspFNI CGCG 4 cut(s) 114, 437, 1078, 1157
BspLI GGNNCC 4 cut(s) 498, 575, 628, 663
BspMAI CTGCAG 1 cut(s) 1102
BspPI GGATC 3 cut(s) 706, 798, 1152
BspT107I GGYRCC 2 cut(s) 573, 626
BsrBI CCGCTC 1 cut(s) 1003
BsrFI RCCGGY 2 cut(s) 493, 629
BsrGI TGTACA 2 cut(s) 118, 603
BsrI ACTGG 2 cut(s) 529, 613
BssAI RCCGGY 2 cut(s) 493, 629
BssMI GATC 5 cut(s) 563, 652, 711, 790, 1144
BssNI GRCGYC 3 cut(s) 390, 405, 906
BssSI CACGAG 1 cut(s) 1166
BssT1I CCWWGG 3 cut(s) 447, 622, 825
Bst2BI CACGAG 1 cut(s) 1166
Bst2UI CCWGG 3 cut(s) 380, 842, 1139
Bst4CI ACNGT 2 cut(s) 163, 295
Bst6I CTCTTC 4 cut(s) 302, 554, 632, 890
BstACI GRCGYC 3 cut(s) 390, 405, 906
BstAPI GCANNNNNTGC 1 cut(s) 1106
BstAUI TGTACA 2 cut(s) 118, 603
BstBAI YACGTR 1 cut(s) 961
BstC8I GCNNGC 3 cut(s) 329, 879, 910
BstDEI CTNAG 3 cut(s) 412, 1035, 1071
BstDSI CCRYGG 3 cut(s) 447, 1155, 1173
BstEII GGTNACC 2 cut(s) 163, 424
BstF5I GGATG 3 cut(s) 352, 486, 622
BstFNI CGCG 4 cut(s) 114, 437, 1078, 1157
BstH2I RGCGCY 1 cut(s) 305
BstHHI GCGC 4 cut(s) 116, 304, 439, 1078
BstKTI GATC 5 cut(s) 566, 655, 714, 793, 1147
BstMAI GTCTC 1 cut(s) 953
BstMBI GATC 5 cut(s) 563, 652, 711, 790, 1144
BstMWI GCNNNNNNNGC 4 cut(s) 730, 781, 905, 1106
BstNI CCWGG 3 cut(s) 380, 842, 1139
BstNSI RCATGY 2 cut(s) 208, 370
BstPAI GACNNNNGTC 3 cut(s) 78, 431, 667
BstPI GGTNACC 2 cut(s) 163, 424
BstSFI CTRYAG 1 cut(s) 1098
BstSLI GKGCMC 1 cut(s) 960
BstUI CGCG 4 cut(s) 114, 437, 1078, 1157
BstV1I GCAGC 6 cut(s) 34, 298, 451, 745, 1051, 1084
BstV2I GAAGAC 1 cut(s) 393
BstX2I RGATCY 1 cut(s) 790
BstYI RGATCY 1 cut(s) 790
BtgI CCRYGG 3 cut(s) 447, 1155, 1173
BtgZI GCGATG 1 cut(s) 546
BtrI CACGTC 1 cut(s) 433
BtsCI GGATG 3 cut(s) 352, 486, 622
BtsIMutI CAGTG 2 cut(s) 522, 606
Cac8I GCNNGC 3 cut(s) 329, 879, 910
CaiI CAGNNNCTG 1 cut(s) 1106
CfoI GCGC 4 cut(s) 116, 304, 439, 1078
Cfr10I RCCGGY 2 cut(s) 493, 629
Cfr13I GGNCC 6 cut(s) 376, 496, 611, 662, 777, 822
Cfr42I CCGCGG 1 cut(s) 1158
Cfr9I CCCGGG 2 cut(s) 547, 658
CseI GACGC 2 cut(s) 398, 914
CspAI ACCGGT 1 cut(s) 629
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 7 cut(s) 67, 205, 367, 448, 781, 974, 1116
DdeI CTNAG 3 cut(s) 412, 1035, 1071
DpnI GATC 5 cut(s) 565, 654, 713, 792, 1146
DpnII GATC 5 cut(s) 563, 652, 711, 790, 1144
DriI GACNNNNNGTC 1 cut(s) 415
EaeI YGGCCR 2 cut(s) 63, 450
Eam1104I CTCTTC 4 cut(s) 302, 554, 632, 890
Eam1105I GACNNNNNGTC 1 cut(s) 415
EarI CTCTTC 4 cut(s) 302, 554, 632, 890
Eco130I CCWWGG 3 cut(s) 447, 622, 825
Eco47I GGWCC 2 cut(s) 662, 777
Eco57I CTGAAG 2 cut(s) 815, 950
Eco72I CACGTG 1 cut(s) 961
Eco88I CYCGRG 3 cut(s) 547, 658, 861
Eco91I GGTNACC 2 cut(s) 163, 424
EcoO65I GGTNACC 2 cut(s) 163, 424
EcoRII CCWGG 3 cut(s) 378, 840, 1137
EcoT14I CCWWGG 3 cut(s) 447, 622, 825
ErhI CCWWGG 3 cut(s) 447, 622, 825
FaeI CATG 7 cut(s) 70, 208, 370, 451, 784, 977, 1119
FalI AAGNNNNNCTT 2 cut(s) 378, 410
FaqI GGGAC 4 cut(s) 86, 675, 1019, 1094
FatI CATG 7 cut(s) 66, 204, 366, 447, 780, 973, 1115
FauI CCCGC 6 cut(s) 148, 706, 996, 1035, 1071, 1162
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 8 cut(s) 23, 174, 287, 440, 734, 1032, 1040, 1098
FokI GGATG 3 cut(s) 359, 493, 629
Fsp4HI GCNGC 8 cut(s) 23, 174, 287, 440, 734, 1032, 1040, 1098
FspBI CTAG 3 cut(s) 177, 194, 248
GlaI GCGC 4 cut(s) 115, 303, 438, 1077
GluI GCNGC 8 cut(s) 23, 174, 287, 440, 734, 1032, 1040, 1098
GsaI CCCAGC 1 cut(s) 255
GsuI CTGGAG 2 cut(s) 1013, 1160
HaeII RGCGCY 1 cut(s) 305
HgaI GACGC 2 cut(s) 398, 914
HhaI GCGC 4 cut(s) 116, 304, 439, 1078
Hin1I GRCGYC 3 cut(s) 390, 405, 906
Hin1II CATG 7 cut(s) 70, 208, 370, 451, 784, 977, 1119
Hin6I GCGC 4 cut(s) 114, 302, 437, 1076
HinP1I GCGC 4 cut(s) 114, 302, 437, 1076
HincII GTYRAC 2 cut(s) 83, 409
HindII GTYRAC 2 cut(s) 83, 409
HinfI GANTC 6 cut(s) 668, 847, 866, 1007, 1082, 1103
HphI GGTGA 8 cut(s) 6, 175, 436, 563, 610, 647, 721, 1073
Hpy166II GTNNAC 4 cut(s) 83, 409, 606, 895
Hpy188I TCNGA 5 cut(s) 585, 795, 930, 1087, 1195
Hpy188III TCNNGA 2 cut(s) 463, 863
Hpy8I GTNNAC 4 cut(s) 83, 409, 606, 895
Hpy99I CGWCG 4 cut(s) 407, 410, 437, 676
HpyCH4III ACNGT 2 cut(s) 163, 295
HpyCH4IV ACGT 3 cut(s) 405, 432, 960
HpyCH4V TGCA 2 cut(s) 877, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 730, 781, 905, 1106
HpyF3I CTNAG 3 cut(s) 412, 1035, 1071
HpySE526I ACGT 3 cut(s) 405, 432, 960
Hsp92I GRCGYC 3 cut(s) 390, 405, 906
Hsp92II CATG 7 cut(s) 70, 208, 370, 451, 784, 977, 1119
HspAI GCGC 4 cut(s) 114, 302, 437, 1076
KpnI GGTACC 2 cut(s) 577, 630
KspI CCGCGG 1 cut(s) 1158
Kzo9I GATC 5 cut(s) 563, 652, 711, 790, 1144
LmnI GCTCC 3 cut(s) 528, 1000, 1051
Lsp1109I GCAGC 6 cut(s) 34, 298, 451, 745, 1051, 1084
LweI GCATC 2 cut(s) 340, 864
MaeI CTAG 3 cut(s) 177, 194, 248
MaeII ACGT 3 cut(s) 405, 432, 960
MaeIII GTNAC 4 cut(s) 12, 163, 196, 424
MalI GATC 5 cut(s) 565, 654, 713, 792, 1146
MbiI CCGCTC 1 cut(s) 1003
MboI GATC 5 cut(s) 563, 652, 711, 790, 1144
MboII GAAGA 9 cut(s) 319, 398, 568, 571, 649, 658, 877, 929, 962
MfeI CAATTG 1 cut(s) 356
MflI RGATCY 1 cut(s) 790
MhlI GDGCHC 1 cut(s) 960
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 1 cut(s) 356
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 4 cut(s) 677, 1001, 1076, 1112
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 1 cut(s) 270
MslI CAYNNNNRTG 3 cut(s) 371, 479, 707
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 5 cut(s) 25, 289, 736, 1042, 1157
MunI CAATTG 1 cut(s) 356
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 3 cut(s) 380, 842, 1139
MvnI CGCG 4 cut(s) 114, 437, 1078, 1157
MwoI GCNNNNNNNGC 4 cut(s) 730, 781, 905, 1106
NcoI CCATGG 1 cut(s) 447
NdeII GATC 5 cut(s) 563, 652, 711, 790, 1144
NlaIII CATG 7 cut(s) 70, 208, 370, 451, 784, 977, 1119
NlaIV GGNNCC 4 cut(s) 498, 575, 628, 663
NmuCI GTSAC 3 cut(s) 12, 163, 424
NspI RCATGY 2 cut(s) 208, 370
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 1 cut(s) 40
PfeI GAWTC 2 cut(s) 847, 866
PflMI CCANNNNNTGG 2 cut(s) 361, 1116
PinAI ACCGGT 1 cut(s) 629
PkrI GCNGC 8 cut(s) 24, 175, 288, 441, 735, 1033, 1041, 1099
PleI GAGTC 4 cut(s) 676, 1001, 1076, 1111
PmaCI CACGTG 1 cut(s) 961
PmlI CACGTG 1 cut(s) 961
PpsI GAGTC 4 cut(s) 676, 1001, 1076, 1111
Ppu21I YACGTR 1 cut(s) 961
PshAI GACNNNNGTC 3 cut(s) 78, 431, 667
Psp6I CCWGG 3 cut(s) 378, 840, 1137
PspCI CACGTG 1 cut(s) 961
PspEI GGTNACC 2 cut(s) 163, 424
PspFI CCCAGC 1 cut(s) 251
PspGI CCWGG 3 cut(s) 378, 840, 1137
PspN4I GGNNCC 4 cut(s) 498, 575, 628, 663
PspPI GGNCC 6 cut(s) 376, 496, 611, 662, 777, 822
PstI CTGCAG 1 cut(s) 1102
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 1 cut(s) 790
PvuII CAGCTG 3 cut(s) 25, 289, 736
RseI CAYNNNNRTG 3 cut(s) 371, 479, 707
SacII CCGCGG 1 cut(s) 1158
SalI GTCGAC 1 cut(s) 407
SaqAI TTAA 1 cut(s) 270
SatI GCNGC 8 cut(s) 23, 174, 287, 440, 734, 1032, 1040, 1098
Sau3AI GATC 5 cut(s) 563, 652, 711, 790, 1144
Sau96I GGNCC 6 cut(s) 376, 496, 611, 662, 777, 822
SchI GAGTC 4 cut(s) 677, 1001, 1076, 1112
SduI GDGCHC 1 cut(s) 960
SfaNI GCATC 2 cut(s) 340, 864
SfcI CTRYAG 1 cut(s) 1098
Sfr303I CCGCGG 1 cut(s) 1158
SgrBI CCGCGG 1 cut(s) 1158
SinI GGWCC 2 cut(s) 662, 777
SmaI CCCGGG 2 cut(s) 549, 660
SmiMI CAYNNNNRTG 3 cut(s) 371, 479, 707
SmlI CTYRAG 3 cut(s) 136, 1012, 1055
SmoI CTYRAG 3 cut(s) 136, 1012, 1055
SpeI ACTAGT 1 cut(s) 193
Sse9I AATT 1 cut(s) 356
SspMI CTAG 3 cut(s) 177, 194, 248
StyI CCWWGG 3 cut(s) 447, 622, 825
TaaI ACNGT 2 cut(s) 163, 295
TaiI ACGT 3 cut(s) 408, 435, 963
TaqI TCGA 4 cut(s) 215, 402, 408, 419
TasI AATT 1 cut(s) 356
TatI WGTACW 4 cut(s) 118, 132, 603, 1182
TauI GCSGC 2 cut(s) 176, 1034
TfiI GAWTC 2 cut(s) 847, 866
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TscAI CASTG 2 cut(s) 529, 613
TseFI GTSAC 3 cut(s) 12, 163, 424
TseI GCWGC 6 cut(s) 22, 286, 439, 733, 1039, 1097
Tsp45I GTSAC 3 cut(s) 12, 163, 424
TspDTI ATGAA 2 cut(s) 777, 962
TspMI CCCGGG 2 cut(s) 547, 658
TspRI CASTG 2 cut(s) 529, 613
Van91I CCANNNNNTGG 2 cut(s) 361, 1116
VpaK11BI GGWCC 2 cut(s) 662, 777
XceI RCATGY 2 cut(s) 208, 370
XmaI CCCGGG 2 cut(s) 547, 658
XmiI GTMKAC 1 cut(s) 408
XspI CTAG 3 cut(s) 177, 194, 248
ZraI GACGTC 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.