Rmu_sc0001565.1_g000024

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001565.1
OG0000087
Physical Location & Seq
Reverse (-)
106689 .. 107681
993 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001565.1_g000024.1.cds

Sequence Viewer

Length: 924 bp
atgattgatgacaccggcatgggaaaagtgccggcctccatgcctatctcttctcgctctagtgggagcgatgaggcgctactccccggtgagaagaagagatcccacaagcaccggcgtcgaactgataaggaggtgacgtacactggccgggatgtccagggtgccggtgcgaagaggcaaaagaaagatcacccgggatcagggccgtcaccttcccttagtctgttatctcccgccgttccggtaatccctaagaagcccatcaagcagctgctgaacgaatacggggtcgctgatgaaaagttcgtgcggtccatgcttggggatctgaaggatatcgacctcgatcgggttcgagccaaagataatactccccaggagaatcgccgtatcgcccgggaatcgatgatgcgggcactctttaatgtgtatgccatcgacgccagtgaggaggatactcacctgaaggaggaggttagcaatctttccgggcaggtgaagtaccttcacggcgagaaggccaagctggagaaggagcgggactcgttgaaggctgagatggccacttctaagcagcggattgctgagcttgagggcgaggttgctgaggcgagggaggaggtgaagaatgcccgggactccgagaagcaggctgcagagtctgccgtctcatggaaggagaaagcagactctctggaggatcgcctacccgcggagaggcacgaggccgtggaggagtacaagtccttagatgagcttatctccatgctggctgctgcccaagacaaggctgtcatcatgaagtttaaagagtgggtggcgggcgggtatctagatgaggtcaaattcaggcggggtctcctggagaaaaagaagcaagagcgggaggcggcgggcaagtctggtgccggcgggtcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

307

Amino Acids

34.13

Weight (kDa)

7.79

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 487
AasI GACNNNNNNGTC 1 cut(s) 794
Acc36I ACCTGC 1 cut(s) 487
AccB1I GGYRCC 2 cut(s) 164, 908
AccBSI CCGCTC 2 cut(s) 541, 886
AccII CGCG 1 cut(s) 716
AclWI GGATC 4 cut(s) 96, 208, 336, 711
AcoI YGGCCR 2 cut(s) 148, 564
AcsI RAATTY 1 cut(s) 848
AcuI CTGAAG 2 cut(s) 353, 488
AcyI GRCGYC 2 cut(s) 118, 444
AfaI GTAC 3 cut(s) 143, 506, 743
AfiI CCNNNNNNNGG 8 cut(s) 203, 324, 352, 472, 675, 715, 720, 790
AgsI TTSAA 1 cut(s) 553
AjnI CCWGG 3 cut(s) 159, 378, 864
AluBI AGCT 4 cut(s) 274, 529, 592, 760
AluI AGCT 4 cut(s) 274, 529, 592, 760
Alw26I GTCTC 2 cut(s) 676, 866
AlwI GGATC 4 cut(s) 96, 208, 336, 711
AlwNI CAGNNNCTG 2 cut(s) 277, 665
Ama87I CYCGRG 3 cut(s) 196, 399, 636
AoxI GGCC 6 cut(s) 33, 148, 206, 522, 564, 729
ApeKI GCWGC 6 cut(s) 271, 274, 577, 656, 776, 779
ApoI RAATTY 1 cut(s) 848
ArsI GACNNNNNNTTYG 2 cut(s) 276, 308
AspLEI GCGC 1 cut(s) 79
AspS9I GGNCC 3 cut(s) 206, 315, 918
AsuC2I CCSGG 9 cut(s) 87, 152, 197, 198, 400, 401, 493, 637, 638
AsuHPI GGTGA 7 cut(s) 101, 148, 185, 204, 455, 511, 637
AvaI CYCGRG 3 cut(s) 196, 399, 636
AvaII GGWCC 2 cut(s) 315, 918
BaeGI GKGCMC 1 cut(s) 421
BalI TGGCCA 1 cut(s) 566
BanI GGYRCC 2 cut(s) 164, 908
BauI CACGAG 1 cut(s) 725
BbvCI CCTCAGC 1 cut(s) 609
BbvI GCAGC 6 cut(s) 261, 283, 589, 643, 763, 766
BccI CCATC 3 cut(s) 272, 446, 556
BceAI ACGGC 6 cut(s) 193, 224, 375, 529, 653, 716
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 3 cut(s) 161, 380, 866
BciVI GTATCC 1 cut(s) 451
BcnI CCSGG 9 cut(s) 87, 152, 197, 198, 400, 401, 493, 637, 638
BcoDI GTCTC 2 cut(s) 676, 866
BfaI CTAG 3 cut(s) 60, 836, 922
BfmI CTRYAG 1 cut(s) 657
BfoI RGCGCY 1 cut(s) 80
BfuAI ACCTGC 1 cut(s) 487
BfuI GTATCC 1 cut(s) 451
BisI GCNGC 7 cut(s) 272, 275, 578, 657, 777, 780, 894
BlpI GCTNAGC 1 cut(s) 588
BlsI GCNGC 7 cut(s) 273, 276, 579, 658, 778, 781, 895
Bme18I GGWCC 2 cut(s) 315, 918
BmeT110I CYCGRG 3 cut(s) 196, 399, 636
BmgT120I GGNCC 3 cut(s) 206, 315, 918
BmiI GGNNCC 3 cut(s) 166, 910, 919
BmsI GCATC 1 cut(s) 402
BplI GAGNNNNNCTC 4 cut(s) 530, 562, 749, 781
BpmI CTGGAG 3 cut(s) 551, 719, 887
Bpu10I CCTNAGC 1 cut(s) 609
Bpu1102I GCTNAGC 1 cut(s) 588
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 9 cut(s) 87, 152, 197, 198, 400, 401, 493, 637, 638
Bsa29I ATCGAT 1 cut(s) 407
BsaHI GRCGYC 2 cut(s) 118, 444
BsaI GGTCTC 1 cut(s) 866
BsaJI CCNNGG 8 cut(s) 85, 160, 196, 378, 399, 636, 714, 732
BsaWI WCCGGW 1 cut(s) 244
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 731, 761
Bsc4I CCNNNNNNNGG 8 cut(s) 203, 324, 352, 472, 675, 715, 720, 790
Bse118I RCCGGY 5 cut(s) 14, 31, 114, 167, 911
Bse1I ACTGG 2 cut(s) 151, 447
BseBI CCWGG 3 cut(s) 161, 380, 866
BseCI ATCGAT 1 cut(s) 407
BseDI CCNNGG 8 cut(s) 85, 160, 196, 378, 399, 636, 714, 732
BseGI GGATG 1 cut(s) 160
BseLI CCNNNNNNNGG 8 cut(s) 203, 324, 352, 472, 675, 715, 720, 790
BseMII CTCAG 3 cut(s) 549, 579, 600
BseNI ACTGG 2 cut(s) 151, 447
BseRI GAGGAG 4 cut(s) 467, 488, 635, 752
BseSI GKGCMC 1 cut(s) 421
BseXI GCAGC 6 cut(s) 261, 283, 589, 643, 763, 766
Bsh1236I CGCG 1 cut(s) 716
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 6 cut(s) 35, 150, 208, 524, 566, 731
BshNI GGYRCC 2 cut(s) 164, 908
BshVI ATCGAT 1 cut(s) 407
BsiEI CGRYCG 1 cut(s) 352
BsiHKCI CYCGRG 3 cut(s) 196, 399, 636
BslFI GGGAC 2 cut(s) 557, 653
BslI CCNNNNNNNGG 8 cut(s) 203, 324, 352, 472, 675, 715, 720, 790
BsmAI GTCTC 2 cut(s) 676, 866
BsmBI CGTCTC 1 cut(s) 676
BsmFI GGGAC 2 cut(s) 557, 653
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 6 cut(s) 35, 150, 208, 524, 566, 731
Bso31I GGTCTC 1 cut(s) 866
BsoBI CYCGRG 3 cut(s) 196, 399, 636
Bsp1286I GDGCHC 1 cut(s) 421
Bsp143I GATC 6 cut(s) 101, 190, 200, 328, 349, 703
Bsp1720I GCTNAGC 1 cut(s) 588
BspANI GGCC 6 cut(s) 35, 150, 208, 524, 566, 731
BspCNI CTCAG 3 cut(s) 550, 580, 601
BspDI ATCGAT 1 cut(s) 407
BspFNI CGCG 1 cut(s) 716
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 3 cut(s) 166, 910, 919
BspMAI CTGCAG 1 cut(s) 661
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 4 cut(s) 96, 208, 336, 711
BspT107I GGYRCC 2 cut(s) 164, 908
BspTNI GGTCTC 1 cut(s) 866
BsrBI CCGCTC 2 cut(s) 541, 886
BsrFI RCCGGY 5 cut(s) 14, 31, 114, 167, 911
BsrI ACTGG 2 cut(s) 151, 447
BssAI RCCGGY 5 cut(s) 14, 31, 114, 167, 911
BssECI CCNNGG 8 cut(s) 85, 160, 196, 378, 399, 636, 714, 732
BssMI GATC 6 cut(s) 101, 190, 200, 328, 349, 703
BssNI GRCGYC 2 cut(s) 118, 444
BssSI CACGAG 1 cut(s) 725
Bst2BI CACGAG 1 cut(s) 725
Bst2UI CCWGG 3 cut(s) 161, 380, 866
Bst6I CTCTTC 3 cut(s) 55, 92, 170
BstACI GRCGYC 2 cut(s) 118, 444
BstAPI GCANNNNNTGC 1 cut(s) 665
BstC8I GCNNGC 7 cut(s) 33, 417, 654, 774, 826, 898, 913
BstDEI CTNAG 7 cut(s) 221, 255, 558, 573, 588, 609, 751
BstDSI CCRYGG 2 cut(s) 714, 732
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 1 cut(s) 160
BstFNI CGCG 1 cut(s) 716
BstH2I RGCGCY 1 cut(s) 80
BstHHI GCGC 1 cut(s) 79
BstKTI GATC 6 cut(s) 104, 193, 203, 331, 352, 706
BstMAI GTCTC 2 cut(s) 676, 866
BstMBI GATC 6 cut(s) 101, 190, 200, 328, 349, 703
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 5 cut(s) 268, 319, 443, 563, 665
BstNI CCWGG 3 cut(s) 161, 380, 866
BstSFI CTRYAG 1 cut(s) 657
BstSLI GKGCMC 1 cut(s) 421
BstUI CGCG 1 cut(s) 716
BstV1I GCAGC 6 cut(s) 261, 283, 589, 643, 763, 766
BstX2I RGATCY 2 cut(s) 101, 328
BstYI RGATCY 2 cut(s) 101, 328
Bsu15I ATCGAT 1 cut(s) 407
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 6 cut(s) 35, 150, 208, 524, 566, 731
BsuTUI ATCGAT 1 cut(s) 407
BtgI CCRYGG 2 cut(s) 714, 732
BtgZI GCGATG 1 cut(s) 84
BtsCI GGATG 1 cut(s) 160
BtsIMutI CAGTG 2 cut(s) 144, 454
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 7 cut(s) 33, 417, 654, 774, 826, 898, 913
CaiI CAGNNNCTG 2 cut(s) 277, 665
CciI TCATGA 1 cut(s) 801
CfoI GCGC 1 cut(s) 79
Cfr10I RCCGGY 5 cut(s) 14, 31, 114, 167, 911
Cfr13I GGNCC 3 cut(s) 206, 315, 918
Cfr42I CCGCGG 1 cut(s) 717
Cfr9I CCCGGG 3 cut(s) 196, 399, 636
ClaI ATCGAT 1 cut(s) 407
CseI GACGC 2 cut(s) 107, 452
Csp6I GTAC 3 cut(s) 142, 505, 742
CviAII CATG 6 cut(s) 19, 40, 319, 675, 769, 802
CviQI GTAC 3 cut(s) 142, 505, 742
DdeI CTNAG 7 cut(s) 221, 255, 558, 573, 588, 609, 751
DpnI GATC 6 cut(s) 103, 192, 202, 330, 351, 705
DpnII GATC 6 cut(s) 101, 190, 200, 328, 349, 703
DraI TTTAAA 1 cut(s) 811
DrdI GACNNNNNNGTC 1 cut(s) 794
DseDI GACNNNNNNGTC 1 cut(s) 794
EaeI YGGCCR 2 cut(s) 148, 564
Eam1104I CTCTTC 3 cut(s) 55, 92, 170
EarI CTCTTC 3 cut(s) 55, 92, 170
Eco31I GGTCTC 1 cut(s) 866
Eco32I GATATC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 315, 918
Eco57I CTGAAG 2 cut(s) 353, 488
Eco88I CYCGRG 3 cut(s) 196, 399, 636
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 918
EcoRII CCWGG 3 cut(s) 159, 378, 864
EcoRV GATATC 1 cut(s) 340
Esp3I CGTCTC 1 cut(s) 676
FaeI CATG 6 cut(s) 22, 43, 322, 678, 772, 805
FaiI YATR 7 cut(s) 20, 41, 320, 435, 676, 770, 803
FaqI GGGAC 2 cut(s) 557, 653
FatI CATG 6 cut(s) 18, 39, 318, 674, 768, 801
Fnu4HI GCNGC 7 cut(s) 272, 275, 578, 657, 777, 780, 894
FokI GGATG 1 cut(s) 167
Fsp4HI GCNGC 7 cut(s) 272, 275, 578, 657, 777, 780, 894
FspBI CTAG 3 cut(s) 60, 836, 922
GlaI GCGC 1 cut(s) 78
GluI GCNGC 7 cut(s) 272, 275, 578, 657, 777, 780, 894
GsuI CTGGAG 3 cut(s) 551, 719, 887
HaeII RGCGCY 1 cut(s) 80
HaeIII GGCC 6 cut(s) 35, 150, 208, 524, 566, 731
HgaI GACGC 2 cut(s) 107, 452
HhaI GCGC 1 cut(s) 79
Hin1I GRCGYC 2 cut(s) 118, 444
Hin1II CATG 6 cut(s) 22, 43, 322, 678, 772, 805
Hin6I GCGC 1 cut(s) 77
HinP1I GCGC 1 cut(s) 77
HinfI GANTC 6 cut(s) 385, 404, 545, 641, 662, 692
HphI GGTGA 7 cut(s) 101, 148, 185, 204, 455, 511, 637
Hpy166II GTNNAC 1 cut(s) 144
Hpy188I TCNGA 2 cut(s) 333, 646
Hpy188III TCNNGA 3 cut(s) 698, 802, 836
Hpy8I GTNNAC 1 cut(s) 144
Hpy99I CGWCG 2 cut(s) 123, 446
HpyAV CCTTC 8 cut(s) 225, 328, 463, 514, 518, 529, 547, 673
HpyCH4IV ACGT 1 cut(s) 140
HpyCH4V TGCA 1 cut(s) 659
HpyF10VI GCNNNNNNNGC 5 cut(s) 268, 319, 443, 563, 665
HpyF3I CTNAG 7 cut(s) 221, 255, 558, 573, 588, 609, 751
HpySE526I ACGT 1 cut(s) 140
Hsp92I GRCGYC 2 cut(s) 118, 444
Hsp92II CATG 6 cut(s) 22, 43, 322, 678, 772, 805
HspAI GCGC 1 cut(s) 77
KroI GCCGGC 2 cut(s) 31, 911
KroNI GCCGGC 2 cut(s) 33, 913
KspI CCGCGG 1 cut(s) 717
Kzo9I GATC 6 cut(s) 101, 190, 200, 328, 349, 703
LmnI GCTCC 2 cut(s) 66, 538
Lsp1109I GCAGC 6 cut(s) 261, 283, 589, 643, 763, 766
LweI GCATC 1 cut(s) 402
MaeI CTAG 3 cut(s) 60, 836, 922
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 2 cut(s) 136, 210
MalI GATC 6 cut(s) 103, 192, 202, 330, 351, 705
MbiI CCGCTC 2 cut(s) 541, 886
MboI GATC 6 cut(s) 101, 190, 200, 328, 349, 703
MboII GAAGA 5 cut(s) 42, 106, 109, 187, 640
MflI RGATCY 2 cut(s) 101, 328
MhlI GDGCHC 1 cut(s) 421
MlsI TGGCCA 1 cut(s) 566
MluCI AATT 1 cut(s) 848
MluNI TGGCCA 1 cut(s) 566
MlyI GAGTC 4 cut(s) 539, 635, 671, 686
Mox20I TGGCCA 1 cut(s) 566
MroNI GCCGGC 2 cut(s) 31, 911
MscI TGGCCA 1 cut(s) 566
MseI TTAA 2 cut(s) 426, 810
MslI CAYNNNNRTG 1 cut(s) 17
Msp20I TGGCCA 1 cut(s) 566
MspA1I CMGCKG 3 cut(s) 274, 580, 716
Mva1269I GAATGC 1 cut(s) 637
MvaI CCWGG 3 cut(s) 161, 380, 866
MvnI CGCG 1 cut(s) 716
MwoI GCNNNNNNNGC 5 cut(s) 268, 319, 443, 563, 665
NaeI GCCGGC 2 cut(s) 33, 913
NciI CCSGG 9 cut(s) 87, 152, 197, 198, 400, 401, 493, 637, 638
NdeII GATC 6 cut(s) 101, 190, 200, 328, 349, 703
NgoMIV GCCGGC 2 cut(s) 31, 911
NlaIII CATG 6 cut(s) 22, 43, 322, 678, 772, 805
NlaIV GGNNCC 3 cut(s) 166, 910, 919
NmuCI GTSAC 2 cut(s) 136, 210
PagI TCATGA 1 cut(s) 801
PaqCI CACCTGC 1 cut(s) 487
PctI GAATGC 1 cut(s) 637
PdiI GCCGGC 2 cut(s) 33, 913
PfeI GAWTC 2 cut(s) 385, 404
PfoI TCCNGGA 1 cut(s) 864
PkrI GCNGC 7 cut(s) 273, 276, 579, 658, 778, 781, 895
Ple19I CGATCG 1 cut(s) 352
PleI GAGTC 4 cut(s) 539, 635, 670, 686
PpsI GAGTC 4 cut(s) 539, 635, 670, 686
PpuMI RGGWCCY 1 cut(s) 918
Psp5II RGGWCCY 1 cut(s) 918
Psp6I CCWGG 3 cut(s) 159, 378, 864
PspGI CCWGG 3 cut(s) 159, 378, 864
PspN4I GGNNCC 3 cut(s) 166, 910, 919
PspPI GGNCC 3 cut(s) 206, 315, 918
PspPPI RGGWCCY 1 cut(s) 918
PstI CTGCAG 1 cut(s) 661
PstNI CAGNNNCTG 2 cut(s) 277, 665
PsuI RGATCY 2 cut(s) 101, 328
PvuI CGATCG 1 cut(s) 352
PvuII CAGCTG 1 cut(s) 274
RsaI GTAC 3 cut(s) 143, 506, 743
RsaNI GTAC 3 cut(s) 142, 505, 742
RseI CAYNNNNRTG 1 cut(s) 17
SacII CCGCGG 1 cut(s) 717
SaqAI TTAA 2 cut(s) 426, 810
SatI GCNGC 7 cut(s) 272, 275, 578, 657, 777, 780, 894
Sau3AI GATC 6 cut(s) 101, 190, 200, 328, 349, 703
Sau96I GGNCC 3 cut(s) 206, 315, 918
SchI GAGTC 4 cut(s) 539, 635, 671, 686
SduI GDGCHC 1 cut(s) 421
SfaNI GCATC 1 cut(s) 402
SfcI CTRYAG 1 cut(s) 657
Sfr303I CCGCGG 1 cut(s) 717
SgrAI CRCCGGYG 1 cut(s) 114
SgrBI CCGCGG 1 cut(s) 717
SinI GGWCC 2 cut(s) 315, 918
SmaI CCCGGG 3 cut(s) 198, 401, 638
SmiMI CAYNNNNRTG 1 cut(s) 17
SmlI CTYRAG 1 cut(s) 593
SmoI CTYRAG 1 cut(s) 593
Sse9I AATT 1 cut(s) 848
SspMI CTAG 3 cut(s) 60, 836, 922
TaiI ACGT 1 cut(s) 143
TaqI TCGA 6 cut(s) 121, 342, 348, 358, 407, 441
TasI AATT 1 cut(s) 848
TatI WGTACW 1 cut(s) 741
TauI GCSGC 1 cut(s) 896
TfiI GAWTC 2 cut(s) 385, 404
Tru1I TTAA 2 cut(s) 426, 810
Tru9I TTAA 2 cut(s) 426, 810
TscAI CASTG 2 cut(s) 151, 454
TseFI GTSAC 2 cut(s) 136, 210
TseI GCWGC 6 cut(s) 271, 274, 577, 656, 776, 779
Tsp45I GTSAC 2 cut(s) 136, 210
TspDTI ATGAA 2 cut(s) 315, 818
TspMI CCCGGG 3 cut(s) 196, 399, 636
TspRI CASTG 2 cut(s) 151, 454
VpaK11BI GGWCC 2 cut(s) 315, 918
XagI CCTNNNNNAGG 1 cut(s) 470
XapI RAATTY 1 cut(s) 848
XbaI TCTAGA 1 cut(s) 835
XmaI CCCGGG 3 cut(s) 196, 399, 636
XspI CTAG 3 cut(s) 60, 836, 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.