Rroxscaffold_7G00164100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000087
Physical Location & Seq
Forward (+)
6159431 .. 6170414
10984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00164100.1

Sequence Viewer

Length: 864 bp
ATGGGCAAAGGACAACACCCCACAAGAAAATCGTCACCTCGTCGGGAATCAATGATGCGGGTACGAGACCTACTTTATCCTTATTTTCCCAATTGTTTGTACTACTCGTGTGTAACGGGGTGTTTGCGAGCACTATTCAACATGTACCCGATTGATGCTAGCGAGGAAGATACGCACTTGAAGGAGGAGGTTAGCAATCTCTCCGGGCAAGTGAAGTATCTTCCTTCGTGGGGAGAAGGGCAAGCTGGAGAAGGAGCGGGACTCCTTGAAGAAGAAGATAGAGTCCTTAATTCCCGTGGTGACGGAGCCGGAGCGCGAAGCAACGGATCGCGGAGCTCGAGGGTGAGTTGTACGAGGCCGGGGATGAGAGAAACTCTCCACGCCCCCTTCGAAAGCCGGCACGGCCAGTTCTTTGTTAAGGTCCCCGCACTTAGAGGTAGCGGCCGCCATCGGTTAACGAATGACTTCAAGGACCGGTCGGTCCTCGTAAGTGGTCGGGAGTCGCCGGTGTTCCTATTCTCTGCCGCCTCTACCCTTGCGTGCGGGGCACGTAGGGAGTTGCTCATTTGCAAGAGTAACGCCGTGTTTGGATCGATTACGGTGGGTCGCTTGGAGCCGGGCCGTGGTAATGGTGGTGGTGGCAAATGCCTTAGGCTTTCCGGAAAAAATCTACCGATCAAATCACCTCCGAAGCTCGCCGCCGACCTCTCTCACCTCTCCGAACCTCCGGTCCTCGACGGAGTAGCCACCAACTTCGCTCGCCACATCCACCTCGTCGCGTCGAATCGTATGGCTCCGCACCGAAGCTCGATGTCGATTTCTTCCGACTTGAAGCTCGACGTCACCGGCGACACGTTTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

31.19

Weight (kDa)

9.53

Isoelectric Point (pI)

53.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 479
AatII GACGTC 1 cut(s) 843
AccBSI CCGCTC 1 cut(s) 257
AccII CGCG 3 cut(s) 316, 331, 779
AccIII TCCGGA 1 cut(s) 659
AclWI GGATC 2 cut(s) 334, 598
AcoI YGGCCR 2 cut(s) 403, 442
AcyI GRCGYC 1 cut(s) 840
AfaI GTAC 4 cut(s) 63, 101, 146, 352
AfiI CCNNNNNNNGG 2 cut(s) 230, 623
AflIII ACRYGT 2 cut(s) 141, 852
AgeI ACCGGT 1 cut(s) 474
AgsI TTSAA 5 cut(s) 139, 181, 269, 469, 832
AloI GAACNNNNNNTCC 2 cut(s) 714, 746
AluBI AGCT 5 cut(s) 245, 336, 694, 807, 835
AluI AGCT 5 cut(s) 245, 336, 694, 807, 835
Alw21I GWGCWC 2 cut(s) 133, 338
Alw26I GTCTC 1 cut(s) 60
AlwI GGATC 2 cut(s) 334, 598
Ama87I CYCGRG 1 cut(s) 337
Aor13HI TCCGGA 1 cut(s) 659
AoxI GGCC 4 cut(s) 356, 403, 442, 619
ArsI GACNNNNNNTTYG 2 cut(s) 714, 746
AsiGI ACCGGT 1 cut(s) 474
Asp700I GAANNNNTTC 1 cut(s) 464
AspLEI GCGC 1 cut(s) 316
AspS9I GGNCC 5 cut(s) 421, 472, 481, 619, 730
AsuC2I CCSGG 3 cut(s) 205, 360, 618
AsuHPI GGTGA 6 cut(s) 27, 311, 355, 675, 704, 835
AsuII TTCGAA 1 cut(s) 390
AsuNHI GCTAGC 1 cut(s) 158
AvaI CYCGRG 1 cut(s) 337
AvaII GGWCC 4 cut(s) 421, 472, 481, 730
AxyI CCTNAGG 1 cut(s) 650
BaeGI GKGCMC 1 cut(s) 550
BanII GRGCYC 1 cut(s) 338
BauI CACGAG 1 cut(s) 106
Bbv12I GWGCWC 2 cut(s) 133, 338
BccI CCATC 1 cut(s) 456
BceAI ACGGC 3 cut(s) 418, 566, 606
BcnI CCSGG 3 cut(s) 205, 360, 618
BcoDI GTCTC 1 cut(s) 60
BfaI CTAG 2 cut(s) 159, 862
BglI GCCNNNNNGGC 1 cut(s) 402
BisI GCNGC 4 cut(s) 442, 445, 525, 699
BlsI GCNGC 4 cut(s) 443, 446, 526, 700
Bme1390I CCNGG 3 cut(s) 205, 360, 618
Bme18I GGWCC 4 cut(s) 421, 472, 481, 730
BmeT110I CYCGRG 1 cut(s) 337
BmgT120I GGNCC 5 cut(s) 421, 472, 481, 619, 730
BmiI GGNNCC 4 cut(s) 307, 423, 615, 795
BmrFI CCNGG 3 cut(s) 205, 360, 618
BmsI GCATC 2 cut(s) 45, 145
BmtI GCTAGC 1 cut(s) 162
BplI GAGNNNNNCTC 6 cut(s) 246, 278, 358, 390, 360, 392
BpmI CTGGAG 1 cut(s) 267
Bpu14I TTCGAA 1 cut(s) 390
BpuMI CCSGG 3 cut(s) 205, 360, 618
Bsa29I ATCGAT 1 cut(s) 593
BsaAI YACGTR 1 cut(s) 551
BsaHI GRCGYC 1 cut(s) 840
BsaI GGTCTC 1 cut(s) 60
BsaJI CCNNGG 3 cut(s) 295, 359, 622
BsaWI WCCGGW 3 cut(s) 474, 659, 727
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 623
Bse118I RCCGGY 4 cut(s) 396, 474, 505, 845
Bse1I ACTGG 1 cut(s) 406
Bse21I CCTNAGG 1 cut(s) 650
BseAI TCCGGA 1 cut(s) 659
BseCI ATCGAT 1 cut(s) 593
BseDI CCNNGG 3 cut(s) 295, 359, 622
BseGI GGATG 2 cut(s) 369, 765
BseLI CCNNNNNNNGG 2 cut(s) 230, 623
BseNI ACTGG 1 cut(s) 406
BseRI GAGGAG 1 cut(s) 200
BseSI GKGCMC 1 cut(s) 550
BseX3I CGGCCG 1 cut(s) 442
Bsh1236I CGCG 3 cut(s) 316, 331, 779
Bsh1285I CGRYCG 2 cut(s) 445, 479
BshFI GGCC 4 cut(s) 358, 405, 444, 621
BshTI ACCGGT 1 cut(s) 474
BshVI ATCGAT 1 cut(s) 593
BsiEI CGRYCG 2 cut(s) 445, 479
BsiHKAI GWGCWC 2 cut(s) 133, 338
BsiHKCI CYCGRG 1 cut(s) 337
BslFI GGGAC 2 cut(s) 273, 407
BslI CCNNNNNNNGG 2 cut(s) 230, 623
BsmAI GTCTC 1 cut(s) 60
BsmFI GGGAC 2 cut(s) 273, 407
BsnI GGCC 4 cut(s) 358, 405, 444, 621
Bso31I GGTCTC 1 cut(s) 60
BsoBI CYCGRG 1 cut(s) 337
Bsp119I TTCGAA 1 cut(s) 390
Bsp1286I GDGCHC 3 cut(s) 133, 338, 550
Bsp13I TCCGGA 1 cut(s) 659
Bsp143I GATC 3 cut(s) 326, 590, 675
BspANI GGCC 4 cut(s) 358, 405, 444, 621
BspDI ATCGAT 1 cut(s) 593
BspEI TCCGGA 1 cut(s) 659
BspFNI CGCG 3 cut(s) 316, 331, 779
BspLI GGNNCC 4 cut(s) 307, 423, 615, 795
BspOI GCTAGC 1 cut(s) 162
BspPI GGATC 2 cut(s) 334, 598
BspT104I TTCGAA 1 cut(s) 390
BspTNI GGTCTC 1 cut(s) 60
BsrBI CCGCTC 1 cut(s) 257
BsrFI RCCGGY 4 cut(s) 396, 474, 505, 845
BsrI ACTGG 1 cut(s) 406
BssAI RCCGGY 4 cut(s) 396, 474, 505, 845
BssECI CCNNGG 3 cut(s) 295, 359, 622
BssMI GATC 3 cut(s) 326, 590, 675
BssNI GRCGYC 1 cut(s) 840
BssSI CACGAG 1 cut(s) 106
Bst2BI CACGAG 1 cut(s) 106
Bst4CI ACNGT 1 cut(s) 601
BstACI GRCGYC 1 cut(s) 840
BstBAI YACGTR 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 390
BstC8I GCNNGC 7 cut(s) 129, 160, 243, 398, 541, 696, 760
BstDEI CTNAG 2 cut(s) 431, 650
BstDSI CCRYGG 2 cut(s) 295, 622
BstF5I GGATG 2 cut(s) 369, 765
BstFNI CGCG 3 cut(s) 316, 331, 779
BstHHI GCGC 1 cut(s) 316
BstKTI GATC 3 cut(s) 329, 593, 678
BstMAI GTCTC 1 cut(s) 60
BstMBI GATC 3 cut(s) 326, 590, 675
BstMCI CGRYCG 2 cut(s) 445, 479
BstMWI GCNNNNNNNGC 2 cut(s) 402, 545
BstNSI RCATGY 1 cut(s) 145
BstSCI CCNGG 3 cut(s) 203, 358, 616
BstSLI GKGCMC 1 cut(s) 550
BstUI CGCG 3 cut(s) 316, 331, 779
BstZI CGGCCG 1 cut(s) 442
Bsu15I ATCGAT 1 cut(s) 593
Bsu36I CCTNAGG 1 cut(s) 650
BsuRI GGCC 4 cut(s) 358, 405, 444, 621
BsuTUI ATCGAT 1 cut(s) 593
BtgI CCRYGG 2 cut(s) 295, 622
BtsCI GGATG 2 cut(s) 369, 765
Cac8I GCNNGC 7 cut(s) 129, 160, 243, 398, 541, 696, 760
CciNI GCGGCCGC 1 cut(s) 442
CfoI GCGC 1 cut(s) 316
Cfr10I RCCGGY 4 cut(s) 396, 474, 505, 845
Cfr13I GGNCC 5 cut(s) 421, 472, 481, 619, 730
ClaI ATCGAT 1 cut(s) 593
CseI GACGC 1 cut(s) 768
Csp6I GTAC 4 cut(s) 62, 100, 145, 351
CspAI ACCGGT 1 cut(s) 474
CviAII CATG 1 cut(s) 142
CviQI GTAC 4 cut(s) 62, 100, 145, 351
DdeI CTNAG 2 cut(s) 431, 650
DpnI GATC 3 cut(s) 328, 592, 677
DpnII GATC 3 cut(s) 326, 590, 675
DrdI GACNNNNNNGTC 1 cut(s) 479
DseDI GACNNNNNNGTC 1 cut(s) 479
EaeI YGGCCR 2 cut(s) 403, 442
EagI CGGCCG 1 cut(s) 442
Ecl136II GAGCTC 1 cut(s) 336
EclXI CGGCCG 1 cut(s) 442
Eco24I GRGCYC 1 cut(s) 338
Eco31I GGTCTC 1 cut(s) 60
Eco47I GGWCC 4 cut(s) 421, 472, 481, 730
Eco52I CGGCCG 1 cut(s) 442
Eco53kI GAGCTC 1 cut(s) 336
Eco81I CCTNAGG 1 cut(s) 650
Eco88I CYCGRG 1 cut(s) 337
EcoICRI GAGCTC 1 cut(s) 336
EcoO109I RGGNCCY 1 cut(s) 421
EcoT38I GRGCYC 1 cut(s) 338
FaeI CATG 1 cut(s) 145
FaiI YATR 2 cut(s) 143, 791
FaqI GGGAC 2 cut(s) 273, 407
FatI CATG 1 cut(s) 141
FauI CCCGC 4 cut(s) 51, 250, 433, 536
Fnu4HI GCNGC 4 cut(s) 442, 445, 525, 699
FokI GGATG 2 cut(s) 376, 752
FriOI GRGCYC 1 cut(s) 338
Fsp4HI GCNGC 4 cut(s) 442, 445, 525, 699
FspBI CTAG 2 cut(s) 159, 862
GlaI GCGC 1 cut(s) 315
GluI GCNGC 4 cut(s) 442, 445, 525, 699
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 4 cut(s) 358, 405, 444, 621
HgaI GACGC 1 cut(s) 768
HhaI GCGC 1 cut(s) 316
Hin1I GRCGYC 1 cut(s) 840
Hin1II CATG 1 cut(s) 145
Hin6I GCGC 1 cut(s) 314
HinP1I GCGC 1 cut(s) 314
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HinfI GANTC 5 cut(s) 47, 261, 282, 500, 784
HpaI GTTAAC 1 cut(s) 456
HphI GGTGA 6 cut(s) 27, 311, 355, 675, 704, 835
Hpy166II GTNNAC 1 cut(s) 456
Hpy188I TCNGA 3 cut(s) 690, 721, 826
Hpy188III TCNNGA 3 cut(s) 44, 497, 660
Hpy8I GTNNAC 1 cut(s) 456
Hpy99I CGWCG 5 cut(s) 45, 740, 779, 784, 842
HpyAV CCTTC 5 cut(s) 175, 230, 234, 245, 397
HpyCH4III ACNGT 1 cut(s) 601
HpyCH4IV ACGT 3 cut(s) 550, 840, 854
HpyCH4V TGCA 1 cut(s) 570
HpyF10VI GCNNNNNNNGC 2 cut(s) 402, 545
HpyF3I CTNAG 2 cut(s) 431, 650
HpySE526I ACGT 3 cut(s) 550, 840, 854
Hsp92I GRCGYC 1 cut(s) 840
Hsp92II CATG 1 cut(s) 145
HspAI GCGC 1 cut(s) 314
Kpn2I TCCGGA 1 cut(s) 659
KroI GCCGGC 1 cut(s) 396
KroNI GCCGGC 1 cut(s) 398
KspAI GTTAAC 1 cut(s) 456
Kzo9I GATC 3 cut(s) 326, 590, 675
LmnI GCTCC 6 cut(s) 254, 305, 311, 333, 613, 799
LweI GCATC 2 cut(s) 45, 145
MaeI CTAG 2 cut(s) 159, 862
MaeII ACGT 3 cut(s) 550, 840, 854
MaeIII GTNAC 5 cut(s) 33, 112, 299, 575, 841
MalI GATC 3 cut(s) 328, 592, 677
MbiI CCGCTC 1 cut(s) 257
MboI GATC 3 cut(s) 326, 590, 675
MboII GAAGA 6 cut(s) 179, 212, 281, 284, 287, 813
MfeI CAATTG 1 cut(s) 91
MhlI GDGCHC 3 cut(s) 133, 338, 550
MluCI AATT 2 cut(s) 91, 289
MlyI GAGTC 3 cut(s) 255, 291, 509
MmeI TCCRAC 1 cut(s) 849
MroI TCCGGA 1 cut(s) 659
MroNI GCCGGC 1 cut(s) 396
MroXI GAANNNNTTC 1 cut(s) 464
MseI TTAA 3 cut(s) 288, 417, 455
MspR9I CCNGG 3 cut(s) 205, 360, 618
MunI CAATTG 1 cut(s) 91
MvnI CGCG 3 cut(s) 316, 331, 779
MwoI GCNNNNNNNGC 2 cut(s) 402, 545
NaeI GCCGGC 1 cut(s) 398
NciI CCSGG 3 cut(s) 205, 360, 618
NdeII GATC 3 cut(s) 326, 590, 675
NgoMIV GCCGGC 1 cut(s) 396
NheI GCTAGC 1 cut(s) 158
NlaIII CATG 1 cut(s) 145
NlaIV GGNNCC 4 cut(s) 307, 423, 615, 795
NmuCI GTSAC 3 cut(s) 33, 299, 841
NotI GCGGCCGC 1 cut(s) 442
NspI RCATGY 1 cut(s) 145
NspV TTCGAA 1 cut(s) 390
PaeR7I CTCGAG 1 cut(s) 337
PciI ACATGT 1 cut(s) 141
PcsI WCGNNNNNNNCGW 3 cut(s) 335, 387, 846
PdiI GCCGGC 1 cut(s) 398
PdmI GAANNNNTTC 1 cut(s) 464
PfeI GAWTC 2 cut(s) 47, 784
PinAI ACCGGT 1 cut(s) 474
PkrI GCNGC 4 cut(s) 443, 446, 526, 700
PleI GAGTC 3 cut(s) 255, 290, 508
PpsI GAGTC 3 cut(s) 255, 290, 508
Ppu21I YACGTR 1 cut(s) 551
PpuMI RGGWCCY 1 cut(s) 421
PscI ACATGT 1 cut(s) 141
Psp124BI GAGCTC 1 cut(s) 338
Psp5II RGGWCCY 1 cut(s) 421
PspN4I GGNNCC 4 cut(s) 307, 423, 615, 795
PspPI GGNCC 5 cut(s) 421, 472, 481, 619, 730
PspPPI RGGWCCY 1 cut(s) 421
PspXI VCTCGAGB 1 cut(s) 337
RsaI GTAC 4 cut(s) 63, 101, 146, 352
RsaNI GTAC 4 cut(s) 62, 100, 145, 351
SacI GAGCTC 1 cut(s) 338
SaqAI TTAA 3 cut(s) 288, 417, 455
SatI GCNGC 4 cut(s) 442, 445, 525, 699
Sau3AI GATC 3 cut(s) 326, 590, 675
Sau96I GGNCC 5 cut(s) 421, 472, 481, 619, 730
SchI GAGTC 3 cut(s) 255, 291, 509
ScrFI CCNGG 3 cut(s) 205, 360, 618
SduI GDGCHC 3 cut(s) 133, 338, 550
SfaNI GCATC 2 cut(s) 45, 145
Sfr274I CTCGAG 1 cut(s) 337
SfuI TTCGAA 1 cut(s) 390
SgrAI CRCCGGYG 2 cut(s) 505, 845
SinI GGWCC 4 cut(s) 421, 472, 481, 730
SlaI CTCGAG 1 cut(s) 337
SmlI CTYRAG 1 cut(s) 337
SmoI CTYRAG 1 cut(s) 337
Sse9I AATT 2 cut(s) 91, 289
SspMI CTAG 2 cut(s) 159, 862
SstI GAGCTC 1 cut(s) 338
StyD4I CCNGG 3 cut(s) 203, 358, 616
TaaI ACNGT 1 cut(s) 601
TaiI ACGT 3 cut(s) 553, 843, 857
TaqI TCGA 8 cut(s) 338, 390, 593, 735, 782, 809, 815, 837
TaqII GACCGA 1 cut(s) 469
TasI AATT 2 cut(s) 91, 289
TatI WGTACW 1 cut(s) 99
TauI GCSGC 4 cut(s) 444, 447, 527, 701
TfiI GAWTC 2 cut(s) 47, 784
Tru1I TTAA 3 cut(s) 288, 417, 455
Tru9I TTAA 3 cut(s) 288, 417, 455
TseFI GTSAC 3 cut(s) 33, 299, 841
Tsp45I GTSAC 3 cut(s) 33, 299, 841
TspGWI ACGGA 3 cut(s) 318, 339, 753
VpaK11BI GGWCC 4 cut(s) 421, 472, 481, 730
XceI RCATGY 1 cut(s) 145
XhoI CTCGAG 1 cut(s) 337
XmnI GAANNNNTTC 1 cut(s) 464
XspI CTAG 2 cut(s) 159, 862
ZraI GACGTC 1 cut(s) 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.