Rmu_sc0000423.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000423.1
OG0000087
Physical Location & Seq
Forward (+)
48652 .. 50908
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000423.1_g000013.1.cds

Sequence Viewer

Length: 1923 bp
atggaatcagaagctaggggtggggatacaggatcatcgtaccagtcttctgcccggcaagctgaggtggatatcgaccggtacttaggccgggcagaccaattagcagagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagtcaaagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggaccgtatgcgacgaacccgggagaagtatgacaatgaacaagatcatcgccatgcgactgaggtggggaataccggacgcggtggagcttaggcctctcagggatggagagatggccgcgaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacaatatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgccgttcgtcaaatgtatagtatgatggctatgtgggacttgtgccagcaagggtggccttccataaatgagttccgcgcggtacaccgagtactgtactctaggaagcagtcttgtgcaggtacagtgacctttgtcgctagggattacgagccgctagttactgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagataaagaataagaagtggcagctgactgtgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacaagatggatgatgcccaactgatggacatgttgatgggccagggagaagatgccctgcacatcgacgtcgacctagggtccaaaggtacgagtcggtccattgaagagacccttctggagatcaccgatgagggatacggtgaacctgaccccgatgctcctgtgacccacgtcgcgcagccctccttggacgatgttatcacaatagatgacaccggaatgggaaaagtaccggtcccagtgcctattacctcttgttccactgggagcgatgaggtgttactccccggtgagaagaagagatcccacaggcaccggcatcgaactgataaggaggtgacatacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgggatcagagtcgtcgccttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagttcgtactgtccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagttggagaaggagcgggactccttgagggttgaaatggccgcctctaagcagcggattgcggagcttgaaggtgaggttgccgaagcgcgggaagaggtaaagaacacccgagactccgagaagaaggctgcagagtctaccgtctcatggaaggagaaggcagaccatctggaggatcgccttcccgctgagaggcatgaggccgtggaggagtacaagtcctcggatgagctcatctctatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtatttagatgaggccaaattcaggtggggtctcctggagaaaaagaagaaggatcgggagacggcgaccaagtctggtgccggtgggtctcagagtaccggaggcgatcggttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

640

Amino Acids

71.15

Weight (kDa)

5.81

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1462
AatII GACGTC 1 cut(s) 879
Acc36I ACCTGC 2 cut(s) 617, 1462
AccB1I GGYRCC 3 cut(s) 450, 1122, 1883
AccB7I CCANNNNNTGG 1 cut(s) 832
AccBSI CCGCTC 1 cut(s) 1516
AccI GTMKAC 2 cut(s) 879, 1640
AccII CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
AclWI GGATC 7 cut(s) 40, 190, 1107, 1219, 1347, 1686, 1866
AcoI YGGCCR 5 cut(s) 210, 372, 1159, 1539, 1800
AcsI RAATTY 1 cut(s) 1823
AcuI CTGAAG 2 cut(s) 1364, 1463
AcyI GRCGYC 1 cut(s) 876
AflIII ACRYGT 1 cut(s) 837
AgeI ACCGGT 2 cut(s) 78, 1042
AgsI TTSAA 3 cut(s) 914, 1535, 1571
AhdI GACNNNNNGTC 1 cut(s) 886
AjiI CACGTC 1 cut(s) 982
AjnI CCWGG 4 cut(s) 849, 1170, 1389, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 1487, 1519
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 1 cut(s) 1737
Alw26I GTCTC 7 cut(s) 911, 1409, 1608, 1651, 1841, 1859, 1899
AlwI GGATC 7 cut(s) 40, 190, 1107, 1219, 1347, 1686, 1866
AlwNI CAGNNNCTG 1 cut(s) 1288
Ama87I CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
ApoI RAATTY 1 cut(s) 1823
AsiGI ACCGGT 2 cut(s) 78, 1042
AspA2I CCTAGG 1 cut(s) 883
AspLEI GCGC 5 cut(s) 403, 587, 775, 988, 1591
AspS9I GGNCC 8 cut(s) 120, 193, 258, 847, 888, 906, 1045, 1371
AsuHPI GGTGA 9 cut(s) 179, 477, 925, 962, 1112, 1159, 1196, 1486, 1586
AvaI CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
AvaII GGWCC 5 cut(s) 120, 258, 888, 906, 1045
AvrII CCTAGG 1 cut(s) 883
BalI TGGCCA 1 cut(s) 212
BanI GGYRCC 3 cut(s) 450, 1122, 1883
BanII GRGCYC 1 cut(s) 1737
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 1737
BbvCI CCTCAGC 1 cut(s) 63
BccI CCATC 8 cut(s) 356, 364, 526, 808, 826, 838, 1283, 1677
BceAI ACGGC 4 cut(s) 494, 1386, 1691, 1884
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BciT130I CCWGG 4 cut(s) 851, 1172, 1391, 1841
BciVI GTATCC 2 cut(s) 19, 938
BcoDI GTCTC 7 cut(s) 911, 1409, 1608, 1651, 1841, 1859, 1899
BfaI CTAG 6 cut(s) 15, 609, 648, 665, 719, 884
BfmI CTRYAG 1 cut(s) 1632
BfoI RGCGCY 2 cut(s) 404, 776
BfuAI ACCTGC 2 cut(s) 617, 1462
BfuI GTATCC 2 cut(s) 19, 938
BlnI CCTAGG 1 cut(s) 883
BmcAI AGTACT 1 cut(s) 600
Bme18I GGWCC 5 cut(s) 120, 258, 888, 906, 1045
BmeRI GACNNNNNGTC 1 cut(s) 886
BmeT110I CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
BmgBI CACGTC 1 cut(s) 982
BmgT120I GGNCC 8 cut(s) 120, 193, 258, 847, 888, 906, 1045, 1371
BmiI GGNNCC 8 cut(s) 121, 195, 259, 452, 889, 1047, 1124, 1885
BmrI ACTGGG 3 cut(s) 138, 1043, 1083
BmsI GCATC 6 cut(s) 462, 811, 850, 955, 1138, 1413
BmuI ACTGGG 3 cut(s) 138, 1043, 1083
BoxI GACNNNNGTC 2 cut(s) 641, 980
BpiI GAAGAC 1 cut(s) 39
BplI GAGNNNNNCTC 4 cut(s) 1505, 1537, 1724, 1756
BpmI CTGGAG 3 cut(s) 947, 1694, 1862
Bpu10I CCTNAGC 2 cut(s) 63, 347
BpuEI CTTGAG 1 cut(s) 1546
BsaBI GATNNNNATC 1 cut(s) 1437
BsaHI GRCGYC 1 cut(s) 876
BsaI GGTCTC 3 cut(s) 911, 1841, 1899
BsaWI WCCGGW 6 cut(s) 78, 331, 1025, 1042, 1255, 1904
BsaXI ACNNNNNCTCC 2 cut(s) 1706, 1736
Bse118I RCCGGY 4 cut(s) 78, 1042, 1125, 1886
Bse1I ACTGG 6 cut(s) 43, 133, 1049, 1078, 1162, 1183
Bse8I GATNNNNATC 1 cut(s) 1437
BseBI CCWGG 4 cut(s) 851, 1172, 1391, 1841
BseGI GGATG 5 cut(s) 367, 477, 823, 1171, 1735
BseJI GATNNNNATC 1 cut(s) 1437
BseMII CTCAG 6 cut(s) 54, 308, 370, 1280, 1683, 1910
BseNI ACTGG 6 cut(s) 43, 133, 1049, 1078, 1162, 1183
BseRI GAGGAG 4 cut(s) 167, 818, 1463, 1727
BseX3I CGGCCG 1 cut(s) 1800
BseYI CCCAGC 1 cut(s) 722
BsgI GTGCAG 3 cut(s) 389, 645, 851
Bsh1236I CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
Bsh1285I CGRYCG 4 cut(s) 79, 1363, 1803, 1915
BshNI GGYRCC 3 cut(s) 450, 1122, 1883
BshTI ACCGGT 2 cut(s) 78, 1042
BsiEI CGRYCG 4 cut(s) 79, 1363, 1803, 1915
BsiHKAI GWGCWC 1 cut(s) 1737
BsiHKCI CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
BslFI GGGAC 4 cut(s) 271, 557, 1031, 1532
BsmAI GTCTC 7 cut(s) 911, 1409, 1608, 1651, 1841, 1859, 1899
BsmBI CGTCTC 3 cut(s) 1409, 1651, 1859
BsmFI GGGAC 4 cut(s) 271, 557, 1031, 1532
BsmI GAATGC 2 cut(s) 225, 511
Bso31I GGTCTC 3 cut(s) 911, 1841, 1899
BsoBI CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
Bsp1286I GDGCHC 1 cut(s) 1737
BspCNI CTCAG 6 cut(s) 55, 309, 369, 1281, 1684, 1909
BspFNI CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
BspHI TCATGA 1 cut(s) 1776
BspLI GGNNCC 8 cut(s) 121, 195, 259, 452, 889, 1047, 1124, 1885
BspMAI CTGCAG 1 cut(s) 1636
BspMI ACCTGC 2 cut(s) 617, 1462
BspPI GGATC 7 cut(s) 40, 190, 1107, 1219, 1347, 1686, 1866
BspT107I GGYRCC 3 cut(s) 450, 1122, 1883
BspTNI GGTCTC 3 cut(s) 911, 1841, 1899
BsrBI CCGCTC 1 cut(s) 1516
BsrFI RCCGGY 4 cut(s) 78, 1042, 1125, 1886
BsrI ACTGG 6 cut(s) 43, 133, 1049, 1078, 1162, 1183
BssAI RCCGGY 4 cut(s) 78, 1042, 1125, 1886
BssNI GRCGYC 1 cut(s) 876
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 3 cut(s) 424, 883, 996
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 4 cut(s) 851, 1172, 1391, 1841
Bst4CI ACNGT 7 cut(s) 262, 603, 634, 766, 950, 1326, 1645
Bst6I CTCTTC 5 cut(s) 773, 909, 1103, 1181, 1590
BstACI GRCGYC 1 cut(s) 876
BstC8I GCNNGC 3 cut(s) 60, 554, 1749
BstDEI CTNAG 9 cut(s) 63, 85, 317, 347, 356, 1289, 1548, 1692, 1896
BstDSI CCRYGG 1 cut(s) 1707
BstF5I GGATG 5 cut(s) 367, 477, 823, 1171, 1735
BstFNI CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
BstH2I RGCGCY 2 cut(s) 404, 776
BstHHI GCGC 5 cut(s) 403, 587, 775, 988, 1591
BstMAI GTCTC 7 cut(s) 911, 1409, 1608, 1651, 1841, 1859, 1899
BstMCI CGRYCG 4 cut(s) 79, 1363, 1803, 1915
BstMWI GCNNNNNNNGC 6 cut(s) 59, 383, 442, 472, 562, 1279
BstNI CCWGG 4 cut(s) 851, 1172, 1391, 1841
BstNSI RCATGY 1 cut(s) 841
BstPAI GACNNNNGTC 2 cut(s) 641, 980
BstSFI CTRYAG 1 cut(s) 1632
BstUI CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 3 cut(s) 182, 1112, 1339
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 3 cut(s) 182, 1112, 1339
BstZI CGGCCG 1 cut(s) 1800
BsuI GTATCC 2 cut(s) 19, 938
BtgI CCRYGG 1 cut(s) 1707
BtgZI GCGATG 2 cut(s) 289, 1095
BtrI CACGTC 1 cut(s) 982
BtsCI GGATG 5 cut(s) 367, 477, 823, 1171, 1735
BtsIMutI CAGTG 4 cut(s) 639, 1056, 1071, 1155
BveI ACCTGC 2 cut(s) 617, 1462
Cac8I GCNNGC 3 cut(s) 60, 554, 1749
CaiI CAGNNNCTG 1 cut(s) 1288
CciI TCATGA 1 cut(s) 1776
CfoI GCGC 5 cut(s) 403, 587, 775, 988, 1591
Cfr10I RCCGGY 4 cut(s) 78, 1042, 1125, 1886
Cfr13I GGNCC 8 cut(s) 120, 193, 258, 847, 888, 906, 1045, 1371
Cfr9I CCCGGG 4 cut(s) 275, 388, 1207, 1410
CseI GACGC 1 cut(s) 344
CspAI ACCGGT 2 cut(s) 78, 1042
CviAII CATG 7 cut(s) 310, 838, 1330, 1487, 1650, 1700, 1777
DdeI CTNAG 9 cut(s) 63, 85, 317, 347, 356, 1289, 1548, 1692, 1896
DriI GACNNNNNGTC 1 cut(s) 886
EaeI YGGCCR 5 cut(s) 210, 372, 1159, 1539, 1800
EagI CGGCCG 1 cut(s) 1800
Eam1104I CTCTTC 5 cut(s) 773, 909, 1103, 1181, 1590
Eam1105I GACNNNNNGTC 1 cut(s) 886
EarI CTCTTC 5 cut(s) 773, 909, 1103, 1181, 1590
Ecl136II GAGCTC 1 cut(s) 1735
EclXI CGGCCG 1 cut(s) 1800
Eco130I CCWWGG 3 cut(s) 424, 883, 996
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 1737
Eco31I GGTCTC 3 cut(s) 911, 1841, 1899
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 5 cut(s) 120, 258, 888, 906, 1045
Eco52I CGGCCG 1 cut(s) 1800
Eco53kI GAGCTC 1 cut(s) 1735
Eco57I CTGAAG 2 cut(s) 1364, 1463
Eco88I CYCGRG 6 cut(s) 218, 275, 388, 1207, 1410, 1611
EcoICRI GAGCTC 1 cut(s) 1735
EcoO109I RGGNCCY 2 cut(s) 120, 193
EcoRII CCWGG 4 cut(s) 849, 1170, 1389, 1839
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 3 cut(s) 424, 883, 996
EcoT38I GRGCYC 1 cut(s) 1737
ErhI CCWWGG 3 cut(s) 424, 883, 996
Esp3I CGTCTC 3 cut(s) 1409, 1651, 1859
FaeI CATG 7 cut(s) 313, 841, 1333, 1490, 1653, 1703, 1780
FalI AAGNNNNNCTT 2 cut(s) 906, 938
FaqI GGGAC 4 cut(s) 271, 557, 1031, 1532
FatI CATG 7 cut(s) 309, 837, 1329, 1486, 1649, 1699, 1776
FauI CCCGC 5 cut(s) 1255, 1419, 1509, 1584, 1696
FblI GTMKAC 2 cut(s) 879, 1640
FokI GGATG 5 cut(s) 374, 484, 830, 1178, 1742
FriOI GRGCYC 1 cut(s) 1737
FspBI CTAG 6 cut(s) 15, 609, 648, 665, 719, 884
GlaI GCGC 5 cut(s) 402, 586, 774, 987, 1590
GsaI CCCAGC 1 cut(s) 726
GsuI CTGGAG 3 cut(s) 947, 1694, 1862
HaeII RGCGCY 2 cut(s) 404, 776
HgaI GACGC 1 cut(s) 344
HhaI GCGC 5 cut(s) 403, 587, 775, 988, 1591
Hin1I GRCGYC 1 cut(s) 876
Hin1II CATG 7 cut(s) 313, 841, 1333, 1490, 1653, 1703, 1780
Hin6I GCGC 5 cut(s) 401, 585, 773, 986, 1589
HinP1I GCGC 5 cut(s) 401, 585, 773, 986, 1589
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HphI GGTGA 9 cut(s) 179, 477, 925, 962, 1112, 1159, 1196, 1486, 1586
Hpy166II GTNNAC 5 cut(s) 243, 592, 880, 953, 1641
Hpy188III TCNNGA 5 cut(s) 218, 926, 1673, 1777, 1862
Hpy8I GTNNAC 5 cut(s) 243, 592, 880, 953, 1641
Hpy99I CGWCG 6 cut(s) 164, 272, 878, 881, 986, 1225
HpyCH4III ACNGT 7 cut(s) 262, 603, 634, 766, 950, 1326, 1645
HpyCH4IV ACGT 2 cut(s) 876, 981
HpyCH4V TGCA 4 cut(s) 406, 626, 868, 1634
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 383, 442, 472, 562, 1279
HpyF3I CTNAG 9 cut(s) 63, 85, 317, 347, 356, 1289, 1548, 1692, 1896
HpySE526I ACGT 2 cut(s) 876, 981
Hsp92I GRCGYC 1 cut(s) 876
Hsp92II CATG 7 cut(s) 313, 841, 1333, 1490, 1653, 1703, 1780
HspAI GCGC 5 cut(s) 401, 585, 773, 986, 1589
LmnI GCTCC 6 cut(s) 343, 423, 973, 1077, 1513, 1564
LweI GCATC 6 cut(s) 462, 811, 850, 955, 1138, 1413
MaeI CTAG 6 cut(s) 15, 609, 648, 665, 719, 884
MaeII ACGT 2 cut(s) 876, 981
MaeIII GTNAC 6 cut(s) 483, 634, 667, 973, 1089, 1147
MbiI CCGCTC 1 cut(s) 1516
MflI RGATCY 3 cut(s) 182, 1112, 1339
MhlI GDGCHC 1 cut(s) 1737
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 2 cut(s) 101, 1823
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 6 cut(s) 164, 910, 1226, 1514, 1610, 1646
MmeI TCCRAC 2 cut(s) 183, 1485
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
MseI TTAA 1 cut(s) 1785
MslI CAYNNNNRTG 4 cut(s) 308, 842, 1028, 1742
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 5 cut(s) 496, 760, 1285, 1555, 1691
Mva1269I GAATGC 2 cut(s) 225, 511
MvaI CCWGG 4 cut(s) 851, 1172, 1391, 1841
MvnI CGCG 6 cut(s) 338, 377, 585, 587, 986, 1591
MwoI GCNNNNNNNGC 6 cut(s) 59, 383, 442, 472, 562, 1279
NlaIII CATG 7 cut(s) 313, 841, 1333, 1490, 1653, 1703, 1780
NlaIV GGNNCC 8 cut(s) 121, 195, 259, 452, 889, 1047, 1124, 1885
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 483, 634, 973, 1147
NspI RCATGY 1 cut(s) 841
PagI TCATGA 1 cut(s) 1776
PaqCI CACCTGC 1 cut(s) 1462
PceI AGGCCT 1 cut(s) 352
PciI ACATGT 1 cut(s) 837
PcsI WCGNNNNNNNCGW 2 cut(s) 122, 1305
PctI GAATGC 2 cut(s) 225, 511
PfeI GAWTC 5 cut(s) 5, 379, 412, 1396, 1415
PflFI GACNNNGTC 1 cut(s) 1876
PflMI CCANNNNNTGG 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 1839
PinAI ACCGGT 2 cut(s) 78, 1042
Ple19I CGATCG 1 cut(s) 1915
PleI GAGTC 6 cut(s) 163, 909, 1225, 1514, 1610, 1645
PpsI GAGTC 6 cut(s) 163, 909, 1225, 1514, 1610, 1645
PpuMI RGGWCCY 1 cut(s) 120
PscI ACATGT 1 cut(s) 837
PshAI GACNNNNGTC 2 cut(s) 641, 980
Psp124BI GAGCTC 1 cut(s) 1737
Psp5II RGGWCCY 1 cut(s) 120
Psp6I CCWGG 4 cut(s) 849, 1170, 1389, 1839
PspFI CCCAGC 1 cut(s) 722
PspGI CCWGG 4 cut(s) 849, 1170, 1389, 1839
PspN4I GGNNCC 8 cut(s) 121, 195, 259, 452, 889, 1047, 1124, 1885
PspPI GGNCC 8 cut(s) 120, 193, 258, 847, 888, 906, 1045, 1371
PspPPI RGGWCCY 1 cut(s) 120
PstI CTGCAG 1 cut(s) 1636
PstNI CAGNNNCTG 1 cut(s) 1288
PsuI RGATCY 3 cut(s) 182, 1112, 1339
PsyI GACNNNGTC 1 cut(s) 1876
PvuI CGATCG 1 cut(s) 1915
PvuII CAGCTG 3 cut(s) 496, 760, 1285
RseI CAYNNNNRTG 4 cut(s) 308, 842, 1028, 1742
SacI GAGCTC 1 cut(s) 1737
SalI GTCGAC 1 cut(s) 878
SaqAI TTAA 1 cut(s) 1785
Sau96I GGNCC 8 cut(s) 120, 193, 258, 847, 888, 906, 1045, 1371
ScaI AGTACT 1 cut(s) 600
SchI GAGTC 6 cut(s) 164, 910, 1226, 1514, 1610, 1646
SduI GDGCHC 1 cut(s) 1737
SfaNI GCATC 6 cut(s) 462, 811, 850, 955, 1138, 1413
SfcI CTRYAG 1 cut(s) 1632
SinI GGWCC 5 cut(s) 120, 258, 888, 906, 1045
SmaI CCCGGG 4 cut(s) 277, 390, 1209, 1412
SmiMI CAYNNNNRTG 4 cut(s) 308, 842, 1028, 1742
SmlI CTYRAG 1 cut(s) 1525
SmoI CTYRAG 1 cut(s) 1525
Sse9I AATT 2 cut(s) 101, 1823
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 6 cut(s) 15, 609, 648, 665, 719, 884
SstI GAGCTC 1 cut(s) 1737
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 3 cut(s) 424, 883, 996
TaaI ACNGT 7 cut(s) 262, 603, 634, 766, 950, 1326, 1645
TaiI ACGT 2 cut(s) 879, 984
TaqI TCGA 7 cut(s) 75, 125, 686, 873, 879, 1132, 1359
TaqII GACCGA 1 cut(s) 894
TasI AATT 2 cut(s) 101, 1823
TatI WGTACW 3 cut(s) 598, 603, 1716
TauI GCSGC 4 cut(s) 377, 664, 1544, 1802
TfiI GAWTC 5 cut(s) 5, 379, 412, 1396, 1415
Tru1I TTAA 1 cut(s) 1785
Tru9I TTAA 1 cut(s) 1785
TscAI CASTG 4 cut(s) 639, 1056, 1078, 1162
TseFI GTSAC 4 cut(s) 483, 634, 973, 1147
Tsp45I GTSAC 4 cut(s) 483, 634, 973, 1147
TspDTI ATGAA 4 cut(s) 308, 1326, 1475, 1793
TspMI CCCGGG 4 cut(s) 275, 388, 1207, 1410
TspRI CASTG 4 cut(s) 639, 1056, 1078, 1162
Tth111I GACNNNGTC 1 cut(s) 1876
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 5 cut(s) 120, 258, 888, 906, 1045
XapI RAATTY 1 cut(s) 1823
XceI RCATGY 1 cut(s) 841
XmaI CCCGGG 4 cut(s) 275, 388, 1207, 1410
XmaJI CCTAGG 1 cut(s) 883
XmiI GTMKAC 2 cut(s) 879, 1640
XspI CTAG 6 cut(s) 15, 609, 648, 665, 719, 884
ZraI GACGTC 1 cut(s) 877
ZrmI AGTACT 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.