Rmu_sc0009660.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009660.1
OG0000087
Physical Location & Seq
Forward (+)
5209 .. 7173
1965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009660.1_g000003.1.cds

Sequence Viewer

Length: 1683 bp
atggaattagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcaatcggtacttaggccgagtagatcaattagcagagaacacggggttgtcgactggggtgttctcggagagcagtgaggagtctgacgatggtgagagcgagggtggatctgcggaggccccggtagtcacggtggcaattcccgagggcataccgaagccgaggtatacacttgcggatgggaccgtatgcgatgaacccgagagaagtatgacgatgaaggagataatcgatatgcgactgaagtggggaataccggatgcggtggagcttaggcctctcagggatggagagatggctgcgaatcctgccccggggtggtatgatggctatgtgggactgaaagagaggagctcttatagattcatctggcattctatactttataggctagggctagggtggctccccgtgaaagcaccgaagaggaaaccccggaaaggcaaagaagaggacagaatggatgatgcccagttgatggatatgatgatgggccagggggaagacgccctacacttctatgtcgacctagggtcgaaaggtacaagtcggtcagttgaagaaacccttctggagatcaccgatgagggatatggtgaacctgatcctgactctcccgtgacccacgtcgtgcagccctctttggctgacgttatcacgatagatgacatcgggatgggaaaggtaccggcccccgcgcctatttcctctcgttccactaggagcgatgaggcattgcttcctggtgagaagaaaagatcccataggcaccggcatcgaagtgataagcaggaggtgacgtatactggccgggatgttcagggtttctgtgcgaagaggcagaagaaagataacccgggaccagagtcgtcgccttcgcttggcttgttgtctcctgccattccggtaatccccaagaagcccatcaagcagctgttgagggagtacggggttgccgatgaaaagttcgtgcggtccatgcttggtgacctgaaggatattgacctcgaccgggttcgggccaaggacaatatgccccaagagaatcgccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaaaatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgaaggctgagatggccgtcgctaagcagcggatagtggagcttgagggtgaagtctttgaggtgcgggaagaggtgaagaacgctcgggactccgagaaaaaagctgcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcatccgaagagctcatcactatgctaactgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatacttggatgaagctaaattcaggcggggtatcctggaaaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccggtgggtcccagagtaccggtggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

560

Amino Acids

62.42

Weight (kDa)

5.4

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1222
Acc36I ACCTGC 1 cut(s) 1222
Acc65I GGTACC 1 cut(s) 760
AccB1I GGYRCC 3 cut(s) 760, 843, 1643
AccB7I CCANNNNNTGG 1 cut(s) 553
AccBSI CCGCTC 2 cut(s) 1276, 1675
AccI GTMKAC 4 cut(s) 125, 242, 600, 878
AccII CGCG 2 cut(s) 773, 1451
AclWI GGATC 5 cut(s) 40, 190, 674, 828, 1446
AcoI YGGCCR 3 cut(s) 883, 1299, 1560
AcsI RAATTY 1 cut(s) 1583
AcuI CTGAAG 4 cut(s) 84, 338, 1088, 1223
AcyI GRCGYC 2 cut(s) 582, 1179
AdeI CACNNNGTG 1 cut(s) 706
AfaI GTAC 8 cut(s) 41, 83, 619, 762, 1022, 1169, 1478, 1663
AgeI ACCGGT 1 cut(s) 1664
AgsI TTSAA 4 cut(s) 635, 1162, 1288, 1546
AhdI GACNNNNNGTC 1 cut(s) 607
AjiI CACGTC 1 cut(s) 703
AjnI CCWGG 6 cut(s) 14, 53, 570, 817, 1431, 1599
AluBI AGCT 9 cut(s) 62, 346, 429, 1009, 1264, 1327, 1391, 1495, 1580
AluI AGCT 9 cut(s) 62, 346, 429, 1009, 1264, 1327, 1391, 1495, 1580
Alw21I GWGCWC 2 cut(s) 431, 1497
Alw26I GTCTC 1 cut(s) 972
AlwI GGATC 5 cut(s) 40, 190, 674, 828, 1446
AlwNI CAGNNNCTG 1 cut(s) 1400
Ama87I CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
ApeKI GCWGC 6 cut(s) 374, 709, 1006, 1312, 1391, 1514
ApoI RAATTY 1 cut(s) 1583
AsiGI ACCGGT 1 cut(s) 1664
Asp700I GAANNNNTTC 1 cut(s) 642
Asp718I GGTACC 1 cut(s) 760
AspA2I CCTAGG 1 cut(s) 604
AspLEI GCGC 1 cut(s) 775
AspS9I GGNCC 8 cut(s) 193, 258, 568, 766, 935, 1050, 1095, 1653
AsuHPI GGTGA 9 cut(s) 179, 646, 683, 833, 883, 1073, 1246, 1346, 1372
AvaI CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
AvaII GGWCC 4 cut(s) 258, 935, 1050, 1653
AvrII CCTAGG 1 cut(s) 604
BaeGI GKGCMC 1 cut(s) 1156
BanI GGYRCC 3 cut(s) 760, 843, 1643
BanII GRGCYC 2 cut(s) 431, 1497
BarI GAAGNNNNNNTAC 2 cut(s) 570, 602
BauI CACGAG 1 cut(s) 1460
BbsI GAAGAC 2 cut(s) 39, 585
Bbv12I GWGCWC 2 cut(s) 431, 1497
BbvI GCAGC 6 cut(s) 361, 721, 1018, 1324, 1378, 1501
BceAI ACGGC 4 cut(s) 1110, 1286, 1388, 1451
BcgI CGANNNNNNTGC 2 cut(s) 833, 867
BciT130I CCWGG 6 cut(s) 16, 55, 572, 819, 1433, 1601
BciVI GTATCC 3 cut(s) 19, 1559, 1607
BcoDI GTCTC 1 cut(s) 972
BfaI CTAG 4 cut(s) 467, 473, 605, 795
BfmI CTRYAG 1 cut(s) 1392
BfuAI ACCTGC 1 cut(s) 1222
BfuI GTATCC 3 cut(s) 19, 1559, 1607
BisI GCNGC 8 cut(s) 375, 710, 1007, 1313, 1392, 1515, 1560, 1629
BlnI CCTAGG 1 cut(s) 604
BlpI GCTNAGC 1 cut(s) 1308
BlsI GCNGC 8 cut(s) 376, 711, 1008, 1314, 1393, 1516, 1561, 1630
Bme18I GGWCC 4 cut(s) 258, 935, 1050, 1653
BmeRI GACNNNNNGTC 1 cut(s) 607
BmeT110I CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
BmgBI CACGTC 1 cut(s) 703
BmgT120I GGNCC 8 cut(s) 193, 258, 568, 766, 935, 1050, 1095, 1653
BmrI ACTGGG 2 cut(s) 138, 541
BmsI GCATC 4 cut(s) 325, 532, 859, 1137
BmuI ACTGGG 2 cut(s) 138, 541
BoxI GACNNNNGTC 2 cut(s) 701, 940
BpiI GAAGAC 2 cut(s) 39, 585
BplI GAGNNNNNCTC 4 cut(s) 413, 445, 1265, 1297
BpmI CTGGAG 3 cut(s) 668, 1286, 1454
Bpu10I CCTNAGC 1 cut(s) 347
Bpu1102I GCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 1 cut(s) 1349
Bsa29I ATCGAT 1 cut(s) 306
BsaBI GATNNNNATC 1 cut(s) 75
BsaHI GRCGYC 2 cut(s) 582, 1179
BsaWI WCCGGW 3 cut(s) 331, 979, 1664
BsaXI ACNNNNNCTCC 4 cut(s) 860, 890, 1466, 1496
Bse118I RCCGGY 4 cut(s) 763, 846, 1646, 1664
Bse1I ACTGG 4 cut(s) 43, 133, 547, 886
Bse3DI GCAATG 1 cut(s) 809
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 6 cut(s) 16, 55, 572, 819, 1433, 1601
BseCI ATCGAT 1 cut(s) 306
BseGI GGATG 8 cut(s) 259, 340, 367, 544, 756, 895, 1484, 1579
BseJI GATNNNNATC 1 cut(s) 75
BseMI GCAATG 1 cut(s) 809
BseMII CTCAG 2 cut(s) 370, 1284
BseNI ACTGG 4 cut(s) 43, 133, 547, 886
BseRI GAGGAG 4 cut(s) 167, 439, 1223, 1487
BseSI GKGCMC 1 cut(s) 1156
BseX3I CGGCCG 1 cut(s) 1560
BseXI GCAGC 6 cut(s) 361, 721, 1018, 1324, 1378, 1501
BsgI GTGCAG 1 cut(s) 728
Bsh1236I CGCG 2 cut(s) 773, 1451
Bsh1285I CGRYCG 2 cut(s) 1087, 1563
BshNI GGYRCC 3 cut(s) 760, 843, 1643
BshTI ACCGGT 1 cut(s) 1664
BshVI ATCGAT 1 cut(s) 306
BsiEI CGRYCG 2 cut(s) 1087, 1563
BsiHKAI GWGCWC 2 cut(s) 431, 1497
BsiHKCI CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
BslFI GGGAC 6 cut(s) 271, 426, 948, 1292, 1388, 1639
BsmAI GTCTC 1 cut(s) 972
BsmFI GGGAC 6 cut(s) 271, 426, 948, 1292, 1388, 1639
BsmI GAATGC 1 cut(s) 448
BsoBI CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
Bsp1286I GDGCHC 3 cut(s) 431, 1156, 1497
Bsp143I GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
Bsp1720I GCTNAGC 1 cut(s) 1308
BspCNI CTCAG 2 cut(s) 369, 1285
BspDI ATCGAT 1 cut(s) 306
BspFNI CGCG 2 cut(s) 773, 1451
BspHI TCATGA 1 cut(s) 1536
BspMAI CTGCAG 1 cut(s) 1396
BspMI ACCTGC 1 cut(s) 1222
BspPI GGATC 5 cut(s) 40, 190, 674, 828, 1446
BspQI GCTCTTC 1 cut(s) 1485
BspT107I GGYRCC 3 cut(s) 760, 843, 1643
BsrBI CCGCTC 2 cut(s) 1276, 1675
BsrDI GCAATG 1 cut(s) 809
BsrFI RCCGGY 4 cut(s) 763, 846, 1646, 1664
BsrI ACTGG 4 cut(s) 43, 133, 547, 886
BssAI RCCGGY 4 cut(s) 763, 846, 1646, 1664
BssMI GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
BssNAI GTATAC 2 cut(s) 243, 879
BssNI GRCGYC 2 cut(s) 582, 1179
BssSI CACGAG 1 cut(s) 1460
BssT1I CCWWGG 2 cut(s) 604, 1098
Bst1107I GTATAC 2 cut(s) 243, 879
Bst2BI CACGAG 1 cut(s) 1460
Bst2UI CCWGG 6 cut(s) 16, 55, 572, 819, 1433, 1601
Bst4CI ACNGT 2 cut(s) 208, 262
Bst6I CTCTTC 6 cut(s) 494, 519, 905, 1163, 1350, 1485
BstACI GRCGYC 2 cut(s) 582, 1179
BstAPI GCANNNNNTGC 1 cut(s) 1400
BstC8I GCNNGC 4 cut(s) 60, 1152, 1183, 1673
BstDEI CTNAG 5 cut(s) 85, 347, 356, 1293, 1308
BstDSI CCRYGG 2 cut(s) 1449, 1467
BstEII GGTNACC 1 cut(s) 1061
BstF5I GGATG 8 cut(s) 259, 340, 367, 544, 756, 895, 1484, 1579
BstFNI CGCG 2 cut(s) 773, 1451
BstHHI GCGC 1 cut(s) 775
BstKTI GATC 8 cut(s) 35, 100, 185, 654, 682, 836, 1441, 1621
BstMAI GTCTC 1 cut(s) 972
BstMBI GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
BstMCI CGRYCG 2 cut(s) 1087, 1563
BstMWI GCNNNNNNNGC 8 cut(s) 59, 383, 478, 1003, 1054, 1178, 1298, 1400
BstNI CCWGG 6 cut(s) 16, 55, 572, 819, 1433, 1601
BstPAI GACNNNNGTC 2 cut(s) 701, 940
BstPI GGTNACC 1 cut(s) 1061
BstSFI CTRYAG 1 cut(s) 1392
BstSLI GKGCMC 1 cut(s) 1156
BstUI CGCG 2 cut(s) 773, 1451
BstV1I GCAGC 6 cut(s) 361, 721, 1018, 1324, 1378, 1501
BstV2I GAAGAC 2 cut(s) 39, 585
BstX2I RGATCY 2 cut(s) 182, 833
BstYI RGATCY 2 cut(s) 182, 833
BstZ17I GTATAC 2 cut(s) 243, 879
BstZI CGGCCG 1 cut(s) 1560
Bsu15I ATCGAT 1 cut(s) 306
BsuI GTATCC 3 cut(s) 19, 1559, 1607
BsuTUI ATCGAT 1 cut(s) 306
BtgI CCRYGG 2 cut(s) 1449, 1467
BtgZI GCGATG 2 cut(s) 282, 816
BtrI CACGTC 1 cut(s) 703
BtsCI GGATG 8 cut(s) 259, 340, 367, 544, 756, 895, 1484, 1579
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 154
BveI ACCTGC 1 cut(s) 1222
Cac8I GCNNGC 4 cut(s) 60, 1152, 1183, 1673
CaiI CAGNNNCTG 1 cut(s) 1400
CciI TCATGA 1 cut(s) 1536
CfoI GCGC 1 cut(s) 775
Cfr10I RCCGGY 4 cut(s) 763, 846, 1646, 1664
Cfr13I GGNCC 8 cut(s) 193, 258, 568, 766, 935, 1050, 1095, 1653
Cfr42I CCGCGG 1 cut(s) 1452
Cfr9I CCCGGG 3 cut(s) 388, 931, 1134
ClaI ATCGAT 1 cut(s) 306
CseI GACGC 2 cut(s) 590, 1187
Csp6I GTAC 8 cut(s) 40, 82, 618, 761, 1021, 1168, 1477, 1662
CspAI ACCGGT 1 cut(s) 1664
CviAII CATG 5 cut(s) 1054, 1144, 1247, 1410, 1537
CviQI GTAC 8 cut(s) 40, 82, 618, 761, 1021, 1168, 1477, 1662
DdeI CTNAG 5 cut(s) 85, 347, 356, 1293, 1308
DpnI GATC 8 cut(s) 34, 99, 184, 653, 681, 835, 1440, 1620
DpnII GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
DraIII CACNNNGTG 1 cut(s) 706
DriI GACNNNNNGTC 1 cut(s) 607
EaeI YGGCCR 3 cut(s) 883, 1299, 1560
EagI CGGCCG 1 cut(s) 1560
Eam1104I CTCTTC 6 cut(s) 494, 519, 905, 1163, 1350, 1485
Eam1105I GACNNNNNGTC 1 cut(s) 607
EarI CTCTTC 6 cut(s) 494, 519, 905, 1163, 1350, 1485
Ecl136II GAGCTC 2 cut(s) 429, 1495
EclXI CGGCCG 1 cut(s) 1560
Eco130I CCWWGG 2 cut(s) 604, 1098
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 431, 1497
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 4 cut(s) 258, 935, 1050, 1653
Eco52I CGGCCG 1 cut(s) 1560
Eco53kI GAGCTC 2 cut(s) 429, 1495
Eco57I CTGAAG 4 cut(s) 84, 338, 1088, 1223
Eco88I CYCGRG 6 cut(s) 218, 275, 388, 931, 1134, 1371
Eco91I GGTNACC 1 cut(s) 1061
EcoICRI GAGCTC 2 cut(s) 429, 1495
EcoO109I RGGNCCY 2 cut(s) 193, 1653
EcoO65I GGTNACC 1 cut(s) 1061
EcoRII CCWGG 6 cut(s) 14, 53, 570, 817, 1431, 1599
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 2 cut(s) 604, 1098
EcoT38I GRGCYC 2 cut(s) 431, 1497
ErhI CCWWGG 2 cut(s) 604, 1098
FaeI CATG 5 cut(s) 1057, 1147, 1250, 1413, 1540
FalI AAGNNNNNCTT 2 cut(s) 627, 659
FaqI GGGAC 6 cut(s) 271, 426, 948, 1292, 1388, 1639
FatI CATG 5 cut(s) 1053, 1143, 1246, 1409, 1536
FauI CCCGC 6 cut(s) 778, 1143, 1269, 1344, 1456, 1584
FblI GTMKAC 4 cut(s) 125, 242, 600, 878
Fnu4HI GCNGC 8 cut(s) 375, 710, 1007, 1313, 1392, 1515, 1560, 1629
FokI GGATG 8 cut(s) 266, 347, 374, 551, 763, 902, 1471, 1586
FriOI GRGCYC 2 cut(s) 431, 1497
Fsp4HI GCNGC 8 cut(s) 375, 710, 1007, 1313, 1392, 1515, 1560, 1629
FspBI CTAG 4 cut(s) 467, 473, 605, 795
GlaI GCGC 1 cut(s) 774
GluI GCNGC 8 cut(s) 375, 710, 1007, 1313, 1392, 1515, 1560, 1629
GsuI CTGGAG 3 cut(s) 668, 1286, 1454
HgaI GACGC 2 cut(s) 590, 1187
HhaI GCGC 1 cut(s) 775
Hin1I GRCGYC 2 cut(s) 582, 1179
Hin1II CATG 5 cut(s) 1057, 1147, 1250, 1413, 1540
Hin6I GCGC 1 cut(s) 773
HinP1I GCGC 1 cut(s) 773
HincII GTYRAC 2 cut(s) 126, 601
HindII GTYRAC 2 cut(s) 126, 601
HphI GGTGA 9 cut(s) 179, 646, 683, 833, 883, 1073, 1246, 1346, 1372
Hpy166II GTNNAC 6 cut(s) 126, 243, 601, 674, 879, 1168
Hpy188I TCNGA 5 cut(s) 142, 160, 1203, 1381, 1489
Hpy188III TCNNGA 8 cut(s) 218, 647, 683, 733, 748, 1373, 1537, 1622
Hpy8I GTNNAC 6 cut(s) 126, 243, 601, 674, 879, 1168
Hpy99I CGWCG 4 cut(s) 40, 707, 949, 1307
HpyCH4III ACNGT 2 cut(s) 208, 262
HpyCH4IV ACGT 3 cut(s) 702, 726, 875
HpyCH4V TGCA 2 cut(s) 709, 1394
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 383, 478, 1003, 1054, 1178, 1298, 1400
HpyF3I CTNAG 5 cut(s) 85, 347, 356, 1293, 1308
HpySE526I ACGT 3 cut(s) 702, 726, 875
Hsp92I GRCGYC 2 cut(s) 582, 1179
Hsp92II CATG 5 cut(s) 1057, 1147, 1250, 1413, 1540
HspAI GCGC 1 cut(s) 773
KflI GGGWCCC 1 cut(s) 1653
KpnI GGTACC 1 cut(s) 764
KspI CCGCGG 1 cut(s) 1452
Kzo9I GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
LguI GCTCTTC 1 cut(s) 1485
LmnI GCTCC 6 cut(s) 343, 426, 486, 798, 1273, 1324
Lsp1109I GCAGC 6 cut(s) 361, 721, 1018, 1324, 1378, 1501
LweI GCATC 4 cut(s) 325, 532, 859, 1137
MaeI CTAG 4 cut(s) 467, 473, 605, 795
MaeII ACGT 3 cut(s) 702, 726, 875
MaeIII GTNAC 4 cut(s) 202, 694, 871, 1061
MalI GATC 8 cut(s) 34, 99, 184, 653, 681, 835, 1440, 1620
MbiI CCGCTC 2 cut(s) 1276, 1675
MboI GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
MflI RGATCY 2 cut(s) 182, 833
MhlI GDGCHC 3 cut(s) 431, 1156, 1497
MluCI AATT 4 cut(s) 5, 101, 213, 1583
MlyI GAGTC 6 cut(s) 164, 680, 950, 1274, 1370, 1406
MroXI GAANNNNTTC 1 cut(s) 642
MslI CAYNNNNRTG 4 cut(s) 594, 749, 855, 1502
MspA1I CMGCKG 3 cut(s) 1009, 1315, 1451
Mva1269I GAATGC 1 cut(s) 448
MvaI CCWGG 6 cut(s) 16, 55, 572, 819, 1433, 1601
MvnI CGCG 2 cut(s) 773, 1451
MwoI GCNNNNNNNGC 8 cut(s) 59, 383, 478, 1003, 1054, 1178, 1298, 1400
NdeII GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
NlaIII CATG 5 cut(s) 1057, 1147, 1250, 1413, 1540
NmeAIII GCCGAG 2 cut(s) 116, 261
NmuCI GTSAC 4 cut(s) 202, 694, 871, 1061
PagI TCATGA 1 cut(s) 1536
PaqCI CACCTGC 1 cut(s) 1222
PceI AGGCCT 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 1485
PcsI WCGNNNNNNNCGW 3 cut(s) 35, 122, 1029
PctI GAATGC 1 cut(s) 448
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 4 cut(s) 379, 438, 1120, 1139
PflMI CCANNNNNTGG 1 cut(s) 553
PfoI TCCNGGA 1 cut(s) 1599
PinAI ACCGGT 1 cut(s) 1664
PkrI GCNGC 8 cut(s) 376, 711, 1008, 1314, 1393, 1516, 1561, 1630
PleI GAGTC 6 cut(s) 163, 680, 949, 1274, 1370, 1405
PpsI GAGTC 6 cut(s) 163, 680, 949, 1274, 1370, 1405
PpuMI RGGWCCY 1 cut(s) 1653
PshAI GACNNNNGTC 2 cut(s) 701, 940
Psp124BI GAGCTC 2 cut(s) 431, 1497
Psp5II RGGWCCY 1 cut(s) 1653
Psp6I CCWGG 6 cut(s) 14, 53, 570, 817, 1431, 1599
PspEI GGTNACC 1 cut(s) 1061
PspGI CCWGG 6 cut(s) 14, 53, 570, 817, 1431, 1599
PspPI GGNCC 8 cut(s) 193, 258, 568, 766, 935, 1050, 1095, 1653
PspPPI RGGWCCY 1 cut(s) 1653
PstI CTGCAG 1 cut(s) 1396
PstNI CAGNNNCTG 1 cut(s) 1400
PsuI RGATCY 2 cut(s) 182, 833
PvuII CAGCTG 1 cut(s) 1009
RsaI GTAC 8 cut(s) 41, 83, 619, 762, 1022, 1169, 1478, 1663
RsaNI GTAC 8 cut(s) 40, 82, 618, 761, 1021, 1168, 1477, 1662
RseI CAYNNNNRTG 4 cut(s) 594, 749, 855, 1502
SacI GAGCTC 2 cut(s) 431, 1497
SacII CCGCGG 1 cut(s) 1452
SalI GTCGAC 2 cut(s) 124, 599
SapI GCTCTTC 1 cut(s) 1485
SatI GCNGC 8 cut(s) 375, 710, 1007, 1313, 1392, 1515, 1560, 1629
Sau3AI GATC 8 cut(s) 32, 97, 182, 651, 679, 833, 1438, 1618
Sau96I GGNCC 8 cut(s) 193, 258, 568, 766, 935, 1050, 1095, 1653
SchI GAGTC 6 cut(s) 164, 680, 950, 1274, 1370, 1406
SduI GDGCHC 3 cut(s) 431, 1156, 1497
SfaNI GCATC 4 cut(s) 325, 532, 859, 1137
SfcI CTRYAG 1 cut(s) 1392
Sfr303I CCGCGG 1 cut(s) 1452
SgrBI CCGCGG 1 cut(s) 1452
SinI GGWCC 4 cut(s) 258, 935, 1050, 1653
SmaI CCCGGG 3 cut(s) 390, 933, 1136
SmiMI CAYNNNNRTG 4 cut(s) 594, 749, 855, 1502
SmlI CTYRAG 1 cut(s) 1328
SmoI CTYRAG 1 cut(s) 1328
Sse9I AATT 4 cut(s) 5, 101, 213, 1583
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 4 cut(s) 467, 473, 605, 795
SstI GAGCTC 2 cut(s) 431, 1497
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 2 cut(s) 604, 1098
TaaI ACNGT 2 cut(s) 208, 262
TaiI ACGT 3 cut(s) 705, 729, 878
TaqI TCGA 6 cut(s) 125, 306, 600, 611, 853, 1083
TaqII GACCGA 1 cut(s) 615
TasI AATT 4 cut(s) 5, 101, 213, 1583
TatI WGTACW 1 cut(s) 1476
TauI GCSGC 2 cut(s) 1562, 1631
TfiI GAWTC 4 cut(s) 379, 438, 1120, 1139
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 4 cut(s) 202, 694, 871, 1061
TseI GCWGC 6 cut(s) 374, 709, 1006, 1312, 1391, 1514
Tsp45I GTSAC 4 cut(s) 202, 694, 871, 1061
TspDTI ATGAA 7 cut(s) 285, 308, 430, 1050, 1235, 1553, 1590
TspMI CCCGGG 3 cut(s) 388, 931, 1134
TspRI CASTG 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 553
VpaK11BI GGWCC 4 cut(s) 258, 935, 1050, 1653
XapI RAATTY 1 cut(s) 1583
XcmI CCANNNNNNNNNTGG 1 cut(s) 1664
XmaI CCCGGG 3 cut(s) 388, 931, 1134
XmaJI CCTAGG 1 cut(s) 604
XmiI GTMKAC 4 cut(s) 125, 242, 600, 878
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 4 cut(s) 467, 473, 605, 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.