Rmu_sc0001107.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001107.1
OG0000087
Physical Location & Seq
Reverse (-)
707 .. 1887
1181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001107.1_g000001.1.cds

Sequence Viewer

Length: 993 bp
ctggagatacctgatgtagggtatggggaaccggatcctaatgcccaaattgtgaggcgggaggcttatgggattgaaggtgtgcttaccctggtagatccggaagggggcaagggaaaagggacagggtcccaagcttctctttcaagcgggtccctaggtagccgaggcgcacttctaccctgggagaagtggaaaagggttcatcgtcatcgccacagcagtagggcgaatgtggaggtgacgtacactggcctggatgtgaagggggactccaagaagtccaagaaaagtcatcaggcccctccggagtcgacccagtcacttggactgttgtctccggtgctgccagttgtccctaagaaaccgatcaagcagctgctctccgagttcggtgtggcagatgagaaatttgtgatgtcgatgcttggtgaccacaaggacaccgacatggaccacatctgggccaaggataacactccccaagagaacaggaagctggcaagggagtcgatggtgcgggcgctatacaacgtctacaccatcaatgccagcgaggaggataccgacttgaaggtggaagtgagcagcctctctgggcaagtgaagtatctccatggggagaaggctaagctggagaaggagcgggactccttgaaggggaaggtggaatccttgacccccaaggtggccgaattggaggcgacagagaaacagatcgccgggcttgagcgagaactctctggggcaagggatgagttaatgagagctcgggactctgagaaagaagttctggagtctgccaagtcatggaaggataaggccgtgattatgaagtacaaagagtgggtggcagcctggtacctggatgaagccaagttcaggcggggtcttcttgaaaagaagaaagagcaggaggctaagaggagggaacatggaagccagagtgctggacctgaggaaggggcaagtggtggccaacccgttgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

330

Amino Acids

36.58

Weight (kDa)

7.93

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 861
AccB1I GGYRCC 1 cut(s) 861
AccB7I CCANNNNNTGG 1 cut(s) 810
AccBSI CCGCTC 1 cut(s) 646
AccI GTMKAC 2 cut(s) 314, 537
AccIII TCCGGA 2 cut(s) 100, 307
AciI CCGC 5 cut(s) 58, 150, 520, 646, 886
AclWI GGATC 3 cut(s) 29, 42, 92
AcoI YGGCCR 2 cut(s) 690, 976
AcsI RAATTY 1 cut(s) 410
AfaI GTAC 3 cut(s) 248, 839, 863
AfiI CCNNNNNNNGG 8 cut(s) 17, 107, 463, 660, 688, 810, 882, 962
AgsI TTSAA 5 cut(s) 77, 147, 574, 658, 899
AjnI CCWGG 5 cut(s) 90, 182, 255, 857, 864
AluBI AGCT 5 cut(s) 137, 379, 499, 634, 770
AluI AGCT 5 cut(s) 137, 379, 499, 634, 770
Alw21I GWGCWC 1 cut(s) 772
Alw26I GTCTC 1 cut(s) 342
AlwI GGATC 3 cut(s) 29, 42, 92
Ama87I CYCGRG 1 cut(s) 771
Aor13HI TCCGGA 2 cut(s) 100, 307
AoxI GGCC 6 cut(s) 253, 300, 465, 690, 822, 976
ApeKI GCWGC 5 cut(s) 346, 376, 379, 588, 854
ApoI RAATTY 1 cut(s) 410
Asp718I GGTACC 1 cut(s) 861
AspA2I CCTAGG 1 cut(s) 157
AspLEI GCGC 2 cut(s) 173, 526
AspS9I GGNCC 6 cut(s) 129, 153, 301, 454, 465, 953
AsuC2I CCSGG 1 cut(s) 724
AsuHPI GGTGA 2 cut(s) 253, 443
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 4 cut(s) 129, 153, 454, 953
AvrII CCTAGG 1 cut(s) 157
AxyI CCTNAGG 1 cut(s) 957
BalI TGGCCA 1 cut(s) 978
BamHI GGATCC 1 cut(s) 34
BanI GGYRCC 1 cut(s) 861
BanII GRGCYC 1 cut(s) 772
BbsI GAAGAC 1 cut(s) 884
Bbv12I GWGCWC 1 cut(s) 772
BbvI GCAGC 5 cut(s) 333, 366, 388, 600, 866
BccI CCATC 2 cut(s) 508, 551
BceAI ACGGC 1 cut(s) 809
BcgI CGANNNNNNTGC 2 cut(s) 492, 526
BciT130I CCWGG 5 cut(s) 92, 184, 257, 859, 866
BciVI GTATCC 1 cut(s) 556
BcnI CCSGG 1 cut(s) 724
BcoDI GTCTC 1 cut(s) 342
BfaI CTAG 1 cut(s) 158
BfoI RGCGCY 1 cut(s) 527
BfuI GTATCC 1 cut(s) 556
BisI GCNGC 5 cut(s) 347, 377, 380, 589, 855
BlnI CCTAGG 1 cut(s) 157
BlpI GCTNAGC 1 cut(s) 630
BlsI GCNGC 5 cut(s) 348, 378, 381, 590, 856
Bme1390I CCNGG 6 cut(s) 92, 184, 257, 724, 859, 866
Bme18I GGWCC 4 cut(s) 129, 153, 454, 953
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 6 cut(s) 129, 153, 301, 454, 465, 953
BmiI GGNNCC 8 cut(s) 30, 36, 130, 131, 154, 155, 303, 863
BmrFI CCNGG 6 cut(s) 92, 184, 257, 724, 859, 866
BmrI ACTGGG 1 cut(s) 313
BmsI GCATC 1 cut(s) 414
BmuI ACTGGG 1 cut(s) 313
BoxI GACNNNNGTC 1 cut(s) 334
BpiI GAAGAC 1 cut(s) 884
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpmI CTGGAG 3 cut(s) 23, 656, 815
Bpu1102I GCTNAGC 1 cut(s) 630
BpuEI CTTGAG 1 cut(s) 749
BpuMI CCSGG 1 cut(s) 724
BsaJI CCNNGG 8 cut(s) 90, 157, 166, 182, 183, 468, 616, 684
BsaWI WCCGGW 4 cut(s) 31, 100, 307, 340
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 8 cut(s) 17, 107, 463, 660, 688, 810, 882, 962
Bse1I ACTGG 3 cut(s) 256, 319, 350
Bse21I CCTNAGG 1 cut(s) 957
BseAI TCCGGA 2 cut(s) 100, 307
BseBI CCWGG 5 cut(s) 92, 184, 257, 859, 866
BseDI CCNNGG 8 cut(s) 90, 157, 166, 182, 183, 468, 616, 684
BseGI GGATG 3 cut(s) 265, 760, 874
BseLI CCNNNNNNNGG 8 cut(s) 17, 107, 463, 660, 688, 810, 882, 962
BseMII CTCAG 2 cut(s) 771, 948
BseNI ACTGG 3 cut(s) 256, 319, 350
BseRI GAGGAG 2 cut(s) 572, 940
BseXI GCAGC 5 cut(s) 333, 366, 388, 600, 866
BshFI GGCC 6 cut(s) 255, 302, 467, 692, 824, 978
BshNI GGYRCC 1 cut(s) 861
BsiHKAI GWGCWC 1 cut(s) 772
BsiHKCI CYCGRG 1 cut(s) 771
BsiSI CCGG 5 cut(s) 32, 101, 308, 341, 723
BslFI GGGAC 7 cut(s) 115, 136, 139, 284, 341, 662, 788
BslI CCNNNNNNNGG 8 cut(s) 17, 107, 463, 660, 688, 810, 882, 962
BsmAI GTCTC 1 cut(s) 342
BsmFI GGGAC 7 cut(s) 115, 136, 139, 284, 341, 662, 788
BsnI GGCC 6 cut(s) 255, 302, 467, 692, 824, 978
BsoBI CYCGRG 1 cut(s) 771
Bsp1286I GDGCHC 1 cut(s) 772
Bsp13I TCCGGA 2 cut(s) 100, 307
Bsp143I GATC 4 cut(s) 34, 97, 369, 717
Bsp1720I GCTNAGC 1 cut(s) 630
Bsp19I CCATGG 1 cut(s) 616
BspACI CCGC 5 cut(s) 58, 150, 520, 646, 886
BspANI GGCC 6 cut(s) 255, 302, 467, 692, 824, 978
BspCNI CTCAG 2 cut(s) 772, 949
BspEI TCCGGA 2 cut(s) 100, 307
BspLI GGNNCC 8 cut(s) 30, 36, 130, 131, 154, 155, 303, 863
BspPI GGATC 3 cut(s) 29, 42, 92
BspT107I GGYRCC 1 cut(s) 861
BsrBI CCGCTC 1 cut(s) 646
BsrI ACTGG 3 cut(s) 256, 319, 350
BssECI CCNNGG 8 cut(s) 90, 157, 166, 182, 183, 468, 616, 684
BssMI GATC 4 cut(s) 34, 97, 369, 717
BssT1I CCWWGG 4 cut(s) 157, 468, 616, 684
Bst2UI CCWGG 5 cut(s) 92, 184, 257, 859, 866
Bst4CI ACNGT 1 cut(s) 333
BstC8I GCNNGC 3 cut(s) 501, 522, 553
BstDEI CTNAG 6 cut(s) 360, 630, 780, 921, 957, 990
BstDSI CCRYGG 1 cut(s) 616
BstEII GGTNACC 1 cut(s) 431
BstENI CCTNNNNNAGG 2 cut(s) 15, 960
BstF5I GGATG 3 cut(s) 265, 760, 874
BstH2I RGCGCY 1 cut(s) 527
BstHHI GCGC 2 cut(s) 173, 526
BstKTI GATC 4 cut(s) 37, 100, 372, 720
BstMAI GTCTC 1 cut(s) 342
BstMBI GATC 4 cut(s) 34, 97, 369, 717
BstNI CCWGG 5 cut(s) 92, 184, 257, 859, 866
BstPAI GACNNNNGTC 1 cut(s) 334
BstPI GGTNACC 1 cut(s) 431
BstSCI CCNGG 6 cut(s) 90, 182, 255, 722, 857, 864
BstV1I GCAGC 5 cut(s) 333, 366, 388, 600, 866
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 34, 97
BstXI CCANNNNNNTGG 2 cut(s) 326, 950
BstYI RGATCY 2 cut(s) 34, 97
Bsu36I CCTNAGG 1 cut(s) 957
BsuI GTATCC 1 cut(s) 556
BsuRI GGCC 6 cut(s) 255, 302, 467, 692, 824, 978
BtgI CCRYGG 1 cut(s) 616
BtgZI GCGATG 1 cut(s) 197
BtsCI GGATG 3 cut(s) 265, 760, 874
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 3 cut(s) 501, 522, 553
CfoI GCGC 2 cut(s) 173, 526
Cfr13I GGNCC 6 cut(s) 129, 153, 301, 454, 465, 953
Csp6I GTAC 3 cut(s) 247, 838, 862
CviAII CATG 4 cut(s) 451, 617, 810, 935
CviQI GTAC 3 cut(s) 247, 838, 862
DdeI CTNAG 6 cut(s) 360, 630, 780, 921, 957, 990
DpnI GATC 4 cut(s) 36, 99, 371, 719
DpnII GATC 4 cut(s) 34, 97, 369, 717
EaeI YGGCCR 2 cut(s) 690, 976
Ecl136II GAGCTC 1 cut(s) 770
Eco130I CCWWGG 4 cut(s) 157, 468, 616, 684
Eco24I GRGCYC 1 cut(s) 772
Eco47I GGWCC 4 cut(s) 129, 153, 454, 953
Eco53kI GAGCTC 1 cut(s) 770
Eco81I CCTNAGG 1 cut(s) 957
Eco88I CYCGRG 1 cut(s) 771
Eco91I GGTNACC 1 cut(s) 431
EcoICRI GAGCTC 1 cut(s) 770
EcoNI CCTNNNNNAGG 2 cut(s) 15, 960
EcoO109I RGGNCCY 3 cut(s) 129, 153, 301
EcoO65I GGTNACC 1 cut(s) 431
EcoRII CCWGG 5 cut(s) 90, 182, 255, 857, 864
EcoT14I CCWWGG 4 cut(s) 157, 468, 616, 684
EcoT38I GRGCYC 1 cut(s) 772
ErhI CCWWGG 4 cut(s) 157, 468, 616, 684
FaeI CATG 4 cut(s) 454, 620, 813, 938
FaiI YATR 8 cut(s) 24, 69, 452, 529, 618, 811, 833, 936
FalI AAGNNNNNCTT 4 cut(s) 69, 101, 126, 158
FaqI GGGAC 7 cut(s) 115, 136, 139, 284, 341, 662, 788
FatI CATG 4 cut(s) 450, 616, 809, 934
FauI CCCGC 5 cut(s) 51, 143, 513, 639, 879
FblI GTMKAC 2 cut(s) 314, 537
Fnu4HI GCNGC 5 cut(s) 347, 377, 380, 589, 855
FokI GGATG 3 cut(s) 272, 767, 881
FriOI GRGCYC 1 cut(s) 772
Fsp4HI GCNGC 5 cut(s) 347, 377, 380, 589, 855
FspBI CTAG 1 cut(s) 158
GlaI GCGC 2 cut(s) 172, 525
GluI GCNGC 5 cut(s) 347, 377, 380, 589, 855
GsuI CTGGAG 3 cut(s) 23, 656, 815
HaeII RGCGCY 1 cut(s) 527
HaeIII GGCC 6 cut(s) 255, 302, 467, 692, 824, 978
HapII CCGG 5 cut(s) 32, 101, 308, 341, 723
HhaI GCGC 2 cut(s) 173, 526
Hin1II CATG 4 cut(s) 454, 620, 813, 938
Hin6I GCGC 2 cut(s) 171, 524
HinP1I GCGC 2 cut(s) 171, 524
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HindIII AAGCTT 1 cut(s) 135
HinfI GANTC 7 cut(s) 272, 311, 509, 650, 671, 776, 797
HpaII CCGG 5 cut(s) 32, 101, 308, 341, 723
HphI GGTGA 2 cut(s) 253, 443
Hpy166II GTNNAC 3 cut(s) 249, 315, 538
Hpy188I TCNGA 2 cut(s) 388, 781
Hpy188III TCNNGA 5 cut(s) 101, 308, 773, 794, 896
Hpy8I GTNNAC 3 cut(s) 249, 315, 538
HpyCH4III ACNGT 1 cut(s) 333
HpyCH4IV ACGT 2 cut(s) 245, 534
HpyF3I CTNAG 6 cut(s) 360, 630, 780, 921, 957, 990
HpySE526I ACGT 2 cut(s) 245, 534
Hsp92II CATG 4 cut(s) 454, 620, 813, 938
HspAI GCGC 2 cut(s) 171, 524
KflI GGGWCCC 2 cut(s) 129, 153
Kpn2I TCCGGA 2 cut(s) 100, 307
KpnI GGTACC 1 cut(s) 865
Kzo9I GATC 4 cut(s) 34, 97, 369, 717
LmnI GCTCC 1 cut(s) 643
Lsp1109I GCAGC 5 cut(s) 333, 366, 388, 600, 866
LweI GCATC 1 cut(s) 414
MaeI CTAG 1 cut(s) 158
MaeII ACGT 2 cut(s) 245, 534
MaeIII GTNAC 3 cut(s) 241, 321, 431
MalI GATC 4 cut(s) 36, 99, 371, 719
MbiI CCGCTC 1 cut(s) 646
MboI GATC 4 cut(s) 34, 97, 369, 717
MboII GAAGA 2 cut(s) 884, 916
MflI RGATCY 2 cut(s) 34, 97
MhlI GDGCHC 1 cut(s) 772
MlsI TGGCCA 1 cut(s) 978
MluCI AATT 3 cut(s) 48, 410, 695
MluNI TGGCCA 1 cut(s) 978
MlyI GAGTC 6 cut(s) 266, 320, 518, 644, 770, 806
Mox20I TGGCCA 1 cut(s) 978
MroI TCCGGA 2 cut(s) 100, 307
MscI TGGCCA 1 cut(s) 978
MseI TTAA 1 cut(s) 761
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 1 cut(s) 978
MspA1I CMGCKG 1 cut(s) 379
MspI CCGG 5 cut(s) 32, 101, 308, 341, 723
MspR9I CCNGG 6 cut(s) 92, 184, 257, 724, 859, 866
MvaI CCWGG 5 cut(s) 92, 184, 257, 859, 866
NciI CCSGG 1 cut(s) 724
NcoI CCATGG 1 cut(s) 616
NdeII GATC 4 cut(s) 34, 97, 369, 717
NlaIII CATG 4 cut(s) 454, 620, 813, 938
NlaIV GGNNCC 8 cut(s) 30, 36, 130, 131, 154, 155, 303, 863
NmeAIII GCCGAG 1 cut(s) 191
NmuCI GTSAC 3 cut(s) 241, 321, 431
PasI CCCWGGG 1 cut(s) 183
PfeI GAWTC 1 cut(s) 671
PflFI GACNNNGTC 2 cut(s) 127, 319
PflMI CCANNNNNTGG 1 cut(s) 810
PkrI GCNGC 5 cut(s) 348, 378, 381, 590, 856
PleI GAGTC 6 cut(s) 266, 319, 517, 644, 770, 805
PpsI GAGTC 6 cut(s) 266, 319, 517, 644, 770, 805
PpuMI RGGWCCY 2 cut(s) 129, 153
PshAI GACNNNNGTC 1 cut(s) 334
Psp124BI GAGCTC 1 cut(s) 772
Psp5II RGGWCCY 2 cut(s) 129, 153
Psp6I CCWGG 5 cut(s) 90, 182, 255, 857, 864
PspEI GGTNACC 1 cut(s) 431
PspGI CCWGG 5 cut(s) 90, 182, 255, 857, 864
PspN4I GGNNCC 8 cut(s) 30, 36, 130, 131, 154, 155, 303, 863
PspPI GGNCC 6 cut(s) 129, 153, 301, 454, 465, 953
PspPPI RGGWCCY 2 cut(s) 129, 153
PsuI RGATCY 2 cut(s) 34, 97
PsyI GACNNNGTC 2 cut(s) 127, 319
PvuII CAGCTG 1 cut(s) 379
RsaI GTAC 3 cut(s) 248, 839, 863
RsaNI GTAC 3 cut(s) 247, 838, 862
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 772
SalI GTCGAC 1 cut(s) 313
SaqAI TTAA 1 cut(s) 761
SatI GCNGC 5 cut(s) 347, 377, 380, 589, 855
Sau3AI GATC 4 cut(s) 34, 97, 369, 717
Sau96I GGNCC 6 cut(s) 129, 153, 301, 454, 465, 953
SchI GAGTC 6 cut(s) 266, 320, 518, 644, 770, 806
ScrFI CCNGG 6 cut(s) 92, 184, 257, 724, 859, 866
SduI GDGCHC 1 cut(s) 772
SfaNI GCATC 1 cut(s) 414
SinI GGWCC 4 cut(s) 129, 153, 454, 953
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
Sse9I AATT 3 cut(s) 48, 410, 695
SsiI CCGC 5 cut(s) 58, 150, 520, 646, 886
SspMI CTAG 1 cut(s) 158
SstI GAGCTC 1 cut(s) 772
StyD4I CCNGG 6 cut(s) 90, 182, 255, 722, 857, 864
StyI CCWWGG 4 cut(s) 157, 468, 616, 684
TaaI ACNGT 1 cut(s) 333
TaiI ACGT 2 cut(s) 248, 537
TaqI TCGA 3 cut(s) 314, 422, 512
TasI AATT 3 cut(s) 48, 410, 695
TatI WGTACW 1 cut(s) 837
TfiI GAWTC 1 cut(s) 671
Tru1I TTAA 1 cut(s) 761
Tru9I TTAA 1 cut(s) 761
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 3 cut(s) 241, 321, 431
TseI GCWGC 5 cut(s) 346, 376, 379, 588, 854
Tsp45I GTSAC 3 cut(s) 241, 321, 431
TspDTI ATGAA 3 cut(s) 194, 848, 885
TspRI CASTG 1 cut(s) 256
Tth111I GACNNNGTC 2 cut(s) 127, 319
Van91I CCANNNNNTGG 1 cut(s) 810
VpaK11BI GGWCC 4 cut(s) 129, 153, 454, 953
XagI CCTNNNNNAGG 2 cut(s) 15, 960
XapI RAATTY 1 cut(s) 410
XmaJI CCTAGG 1 cut(s) 157
XmiI GTMKAC 2 cut(s) 314, 537
XspI CTAG 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.