Rmu_sc0002264.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002264.1
OG0000087
Physical Location & Seq
Reverse (-)
61865 .. 63664
1800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002264.1_g000020.1.cds

Sequence Viewer

Length: 1416 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgatcggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcggagagcagtgaagagtacgacgagggtgagagaaagggtggatatgaggaggctccggtagtcacggtggcaattcccgagggcatactgaagcctaggtatacacttgcggacgggaccgtatgcgacgaacccgggagaagtatgacaatgaaggagatcatcgccatgcgactgaagtggggaataccggacgcggtggatctttggcctctcagggatggagagatggccgcgaatcctgccccggggtgggtagccctgcacgagaatcagttccaccaagggttatctctaccgttgccccggtgcctacagtatctgctgcggatgttgaacctgtcaccggggcagttgaccccgaatgctattcgtcagatatacagtatgatggtcatgtgggacttgtggcaacaagggtggccttccataaatgaattccgcgcggcattacgaaccattagttaccgacatgccttcctcaatgagcaaaaggtggaggaacaaatgaaagtgccaaagaggaaaccccggaaaggcaaagaggaggacagaatggatgatactcagttgatggatatgctgatgggtcaggtagaagacgcctttcacatcgatgtcgacctagggtcgaagggtacgggtccgtccgttgaagagaccctactggagatcaccgacgagggatatggggaacctgatcctgacattcccgtgacccaagtcgtgcagccctccgttgtcgacgtcatcacgatagatgataccgggacaggaaaggtaccggtctccgtgtctatttcctcttgttctactgggagcgatgaggcattgcttccctgtgagaagaaaagatcccataggcaccggcaccgaagtgataagcaggaggtgacgtataccggtcgggatgttaggggatttggtgtgaagaggcagaagaaagatcacccgggacctgggtcgtcgccttcgcttggcttgttgtctcctgcccttccggtaatccccaagaagcctattaagcagctgttaagtgaatacggggttgccgacgaaaagttcgtgcggtccatgctaagtgacctgaaggacattgacctcgaccgggtgcgggccaaggacaatacgcccaaagagaatcgccgtctcgcccgggaatccatgatgcgggcactcttcaatgtgtacgcgattgacgccagcgaggaagatactgatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

471

Amino Acids

52.56

Weight (kDa)

5.15

Isoelectric Point (pI)

38.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1384
AatII GACGTC 1 cut(s) 891
Acc36I ACCTGC 1 cut(s) 1384
Acc65I GGTACC 1 cut(s) 922
AccB1I GGYRCC 4 cut(s) 450, 922, 1005, 1011
AccI GTMKAC 4 cut(s) 242, 762, 885, 1040
AccII CGCG 5 cut(s) 338, 377, 585, 587, 1334
AciI CCGC 9 cut(s) 251, 338, 375, 469, 583, 587, 1210, 1255, 1312
AclWI GGATC 6 cut(s) 40, 114, 127, 351, 836, 990
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 1 cut(s) 578
AcuI CTGAAG 5 cut(s) 84, 251, 338, 1250, 1385
AcyI GRCGYC 3 cut(s) 744, 888, 1341
AfaI GTAC 6 cut(s) 41, 83, 158, 781, 924, 1331
AgeI ACCGGT 2 cut(s) 925, 1043
AgsI TTSAA 3 cut(s) 478, 797, 1324
AhdI GACNNNNNGTC 1 cut(s) 769
AjnI CCWGG 3 cut(s) 14, 53, 1099
AleI CACNNNNGTG 1 cut(s) 1017
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 2 cut(s) 62, 1171
AluI AGCT 2 cut(s) 62, 1171
Alw26I GTCTC 4 cut(s) 794, 934, 1134, 1295
AlwI GGATC 6 cut(s) 40, 114, 127, 351, 836, 990
AlwNI CAGNNNCTG 1 cut(s) 463
Ama87I CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
AoxI GGCC 5 cut(s) 88, 350, 372, 563, 1257
ApeKI GCWGC 3 cut(s) 466, 871, 1168
ApoI RAATTY 1 cut(s) 578
ArsI GACNNNNNNTTYG 2 cut(s) 1187, 1219
AsiGI ACCGGT 2 cut(s) 925, 1043
Asp700I GAANNNNTTC 1 cut(s) 416
Asp718I GGTACC 1 cut(s) 922
AspA2I CCTAGG 2 cut(s) 236, 766
AspLEI GCGC 1 cut(s) 587
AspS9I GGNCC 5 cut(s) 258, 785, 1097, 1212, 1257
AsuHPI GGTGA 6 cut(s) 179, 477, 808, 1045, 1082, 1408
AvaI CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
AvaII GGWCC 4 cut(s) 258, 785, 1097, 1212
AvrII CCTAGG 2 cut(s) 236, 766
BaeGI GKGCMC 1 cut(s) 1318
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 4 cut(s) 450, 922, 1005, 1011
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 2 cut(s) 39, 747
BbvI GCAGC 3 cut(s) 453, 883, 1180
BccI CCATC 5 cut(s) 356, 364, 526, 709, 721
BceAI ACGGC 1 cut(s) 1272
BciT130I CCWGG 3 cut(s) 16, 55, 1101
BciVI GTATCC 1 cut(s) 19
BcoDI GTCTC 4 cut(s) 794, 934, 1134, 1295
BfaI CTAG 3 cut(s) 237, 767, 1414
BfmI CTRYAG 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 1384
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 5 cut(s) 375, 467, 588, 872, 1169
BlnI CCTAGG 2 cut(s) 236, 766
BlsI GCNGC 5 cut(s) 376, 468, 589, 873, 1170
Bme18I GGWCC 4 cut(s) 258, 785, 1097, 1212
BmeRI GACNNNNNGTC 1 cut(s) 769
BmeT110I CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
BmgT120I GGNCC 5 cut(s) 258, 785, 1097, 1212, 1257
BmrI ACTGGG 2 cut(s) 138, 966
BmsI GCATC 1 cut(s) 1299
BmuI ACTGGG 2 cut(s) 138, 966
BoxI GACNNNNGTC 2 cut(s) 863, 1102
BpiI GAAGAC 2 cut(s) 39, 747
BpmI CTGGAG 1 cut(s) 830
Bsa29I ATCGAT 2 cut(s) 75, 756
BsaBI GATNNNNATC 2 cut(s) 75, 1359
BsaHI GRCGYC 3 cut(s) 744, 888, 1341
BsaI GGTCTC 2 cut(s) 794, 934
BsaWI WCCGGW 5 cut(s) 196, 331, 925, 1043, 1141
BsaXI ACNNNNNCTCC 2 cut(s) 1022, 1052
Bse118I RCCGGY 3 cut(s) 925, 1008, 1043
Bse1I ACTGG 4 cut(s) 43, 133, 813, 961
Bse3DI GCAATG 1 cut(s) 971
Bse8I GATNNNNATC 2 cut(s) 75, 1359
BseBI CCWGG 3 cut(s) 16, 55, 1101
BseCI ATCGAT 2 cut(s) 75, 756
BseGI GGATG 4 cut(s) 367, 477, 706, 1057
BseJI GATNNNNATC 2 cut(s) 75, 1359
BseMI GCAATG 1 cut(s) 971
BseMII CTCAG 2 cut(s) 370, 722
BseNI ACTGG 4 cut(s) 43, 133, 813, 961
BseRI GAGGAG 3 cut(s) 203, 701, 1385
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 3 cut(s) 453, 883, 1180
BsgI GTGCAG 2 cut(s) 389, 890
Bsh1236I CGCG 5 cut(s) 338, 377, 585, 587, 1334
Bsh1285I CGRYCG 3 cut(s) 79, 1048, 1249
BshFI GGCC 5 cut(s) 90, 352, 374, 565, 1259
BshNI GGYRCC 4 cut(s) 450, 922, 1005, 1011
BshTI ACCGGT 2 cut(s) 925, 1043
BshVI ATCGAT 2 cut(s) 75, 756
BsiEI CGRYCG 3 cut(s) 79, 1048, 1249
BsiHKCI CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
BslFI GGGAC 4 cut(s) 271, 557, 925, 1110
BsmAI GTCTC 4 cut(s) 794, 934, 1134, 1295
BsmBI CGTCTC 1 cut(s) 1295
BsmFI GGGAC 4 cut(s) 271, 557, 925, 1110
BsmI GAATGC 1 cut(s) 511
BsnI GGCC 5 cut(s) 90, 352, 374, 565, 1259
Bso31I GGTCTC 2 cut(s) 794, 934
BsoBI CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
Bsp1286I GDGCHC 1 cut(s) 1318
BspACI CCGC 9 cut(s) 251, 338, 375, 469, 583, 587, 1210, 1255, 1312
BspANI GGCC 5 cut(s) 90, 352, 374, 565, 1259
BspCNI CTCAG 2 cut(s) 369, 721
BspDI ATCGAT 2 cut(s) 75, 756
BspFNI CGCG 5 cut(s) 338, 377, 585, 587, 1334
BspMI ACCTGC 1 cut(s) 1384
BspPI GGATC 6 cut(s) 40, 114, 127, 351, 836, 990
BspT107I GGYRCC 4 cut(s) 450, 922, 1005, 1011
BspTNI GGTCTC 2 cut(s) 794, 934
BsrDI GCAATG 1 cut(s) 971
BsrFI RCCGGY 3 cut(s) 925, 1008, 1043
BsrI ACTGG 4 cut(s) 43, 133, 813, 961
BssAI RCCGGY 3 cut(s) 925, 1008, 1043
BssNAI GTATAC 2 cut(s) 243, 1041
BssNI GRCGYC 3 cut(s) 744, 888, 1341
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 4 cut(s) 236, 424, 766, 1260
Bst1107I GTATAC 2 cut(s) 243, 1041
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 3 cut(s) 16, 55, 1101
Bst4CI ACNGT 5 cut(s) 208, 262, 441, 459, 527
Bst6I CTCTTC 4 cut(s) 147, 792, 1067, 1325
BstACI GRCGYC 3 cut(s) 744, 888, 1341
BstC8I GCNNGC 4 cut(s) 60, 1257, 1314, 1345
BstDEI CTNAG 4 cut(s) 85, 356, 708, 1220
BstF5I GGATG 4 cut(s) 367, 477, 706, 1057
BstFNI CGCG 5 cut(s) 338, 377, 585, 587, 1334
BstHHI GCGC 1 cut(s) 587
BstMAI GTCTC 4 cut(s) 794, 934, 1134, 1295
BstMCI CGRYCG 3 cut(s) 79, 1048, 1249
BstMWI GCNNNNNNNGC 5 cut(s) 59, 383, 1165, 1216, 1340
BstNI CCWGG 3 cut(s) 16, 55, 1101
BstNSI RCATGY 1 cut(s) 617
BstPAI GACNNNNGTC 2 cut(s) 863, 1102
BstSFI CTRYAG 1 cut(s) 455
BstSLI GKGCMC 1 cut(s) 1318
BstUI CGCG 5 cut(s) 338, 377, 585, 587, 1334
BstV1I GCAGC 3 cut(s) 453, 883, 1180
BstV2I GAAGAC 2 cut(s) 39, 747
BstX2I RGATCY 3 cut(s) 119, 343, 995
BstYI RGATCY 3 cut(s) 119, 343, 995
BstZ17I GTATAC 2 cut(s) 243, 1041
Bsu15I ATCGAT 2 cut(s) 75, 756
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 5 cut(s) 90, 352, 374, 565, 1259
BsuTUI ATCGAT 2 cut(s) 75, 756
BtgZI GCGATG 2 cut(s) 289, 978
BtsCI GGATG 4 cut(s) 367, 477, 706, 1057
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 154
BveI ACCTGC 1 cut(s) 1384
Cac8I GCNNGC 4 cut(s) 60, 1257, 1314, 1345
CaiI CAGNNNCTG 1 cut(s) 463
CfoI GCGC 1 cut(s) 587
Cfr10I RCCGGY 3 cut(s) 925, 1008, 1043
Cfr13I GGNCC 5 cut(s) 258, 785, 1097, 1212, 1257
Cfr9I CCCGGG 4 cut(s) 275, 388, 1093, 1296
ClaI ATCGAT 2 cut(s) 75, 756
CseI GACGC 3 cut(s) 344, 752, 1349
Csp6I GTAC 6 cut(s) 40, 82, 157, 780, 923, 1330
CspAI ACCGGT 2 cut(s) 925, 1043
CspCI CAANNNNNGTGG 2 cut(s) 542, 577
CviAII CATG 6 cut(s) 310, 538, 614, 1216, 1306, 1409
CviQI GTAC 6 cut(s) 40, 82, 157, 780, 923, 1330
DdeI CTNAG 4 cut(s) 85, 356, 708, 1220
DriI GACNNNNNGTC 1 cut(s) 769
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 4 cut(s) 147, 792, 1067, 1325
Eam1105I GACNNNNNGTC 1 cut(s) 769
EarI CTCTTC 4 cut(s) 147, 792, 1067, 1325
Eco130I CCWWGG 4 cut(s) 236, 424, 766, 1260
Eco31I GGTCTC 2 cut(s) 794, 934
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 4 cut(s) 258, 785, 1097, 1212
Eco57I CTGAAG 5 cut(s) 84, 251, 338, 1250, 1385
Eco88I CYCGRG 5 cut(s) 218, 275, 388, 1093, 1296
EcoO109I RGGNCCY 1 cut(s) 1097
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 3 cut(s) 14, 53, 1099
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 4 cut(s) 236, 424, 766, 1260
ErhI CCWWGG 4 cut(s) 236, 424, 766, 1260
Esp3I CGTCTC 1 cut(s) 1295
FaeI CATG 6 cut(s) 313, 541, 617, 1219, 1309, 1412
FaqI GGGAC 4 cut(s) 271, 557, 925, 1110
FatI CATG 6 cut(s) 309, 537, 613, 1215, 1305, 1408
FauI CCCGC 2 cut(s) 1248, 1305
FblI GTMKAC 4 cut(s) 242, 762, 885, 1040
Fnu4HI GCNGC 5 cut(s) 375, 467, 588, 872, 1169
FokI GGATG 4 cut(s) 374, 484, 713, 1064
Fsp4HI GCNGC 5 cut(s) 375, 467, 588, 872, 1169
FspBI CTAG 3 cut(s) 237, 767, 1414
GlaI GCGC 1 cut(s) 586
GluI GCNGC 5 cut(s) 375, 467, 588, 872, 1169
GsuI CTGGAG 1 cut(s) 830
HaeIII GGCC 5 cut(s) 90, 352, 374, 565, 1259
HgaI GACGC 3 cut(s) 344, 752, 1349
HhaI GCGC 1 cut(s) 587
Hin1I GRCGYC 3 cut(s) 744, 888, 1341
Hin1II CATG 6 cut(s) 313, 541, 617, 1219, 1309, 1412
Hin6I GCGC 1 cut(s) 585
HinP1I GCGC 1 cut(s) 585
HincII GTYRAC 3 cut(s) 498, 763, 886
HindII GTYRAC 3 cut(s) 498, 763, 886
HinfI GANTC 5 cut(s) 5, 379, 412, 1282, 1301
HphI GGTGA 6 cut(s) 179, 477, 808, 1045, 1082, 1408
Hpy166II GTNNAC 6 cut(s) 243, 498, 763, 886, 1041, 1330
Hpy188I TCNGA 4 cut(s) 10, 142, 519, 1365
Hpy188III TCNNGA 4 cut(s) 218, 845, 895, 1049
Hpy8I GTNNAC 6 cut(s) 243, 498, 763, 886, 1041, 1330
Hpy99I CGWCG 7 cut(s) 40, 164, 272, 824, 890, 1111, 1199
HpyAV CCTTC 8 cut(s) 289, 576, 628, 769, 1122, 1148, 1225, 1360
HpyCH4III ACNGT 5 cut(s) 208, 262, 441, 459, 527
HpyCH4IV ACGT 2 cut(s) 888, 1037
HpyCH4V TGCA 3 cut(s) 406, 871, 1408
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 383, 1165, 1216, 1340
HpyF3I CTNAG 4 cut(s) 85, 356, 708, 1220
HpySE526I ACGT 2 cut(s) 888, 1037
Hsp92I GRCGYC 3 cut(s) 744, 888, 1341
Hsp92II CATG 6 cut(s) 313, 541, 617, 1219, 1309, 1412
HspAI GCGC 1 cut(s) 585
KpnI GGTACC 1 cut(s) 926
LmnI GCTCC 2 cut(s) 199, 960
Lsp1109I GCAGC 3 cut(s) 453, 883, 1180
LweI GCATC 1 cut(s) 1299
MaeI CTAG 3 cut(s) 237, 767, 1414
MaeII ACGT 2 cut(s) 888, 1037
MaeIII GTNAC 6 cut(s) 202, 483, 605, 856, 1033, 1223
MboII GAAGA 9 cut(s) 39, 164, 752, 809, 1000, 1084, 1093, 1312, 1364
MflI RGATCY 3 cut(s) 119, 343, 995
MhlI GDGCHC 1 cut(s) 1318
MluCI AATT 3 cut(s) 101, 213, 578
MroXI GAANNNNTTC 1 cut(s) 416
MseI TTAA 2 cut(s) 1164, 1175
MslI CAYNNNNRTG 4 cut(s) 308, 756, 854, 1017
MspA1I CMGCKG 1 cut(s) 1171
Mva1269I GAATGC 1 cut(s) 511
MvaI CCWGG 3 cut(s) 16, 55, 1101
MvnI CGCG 5 cut(s) 338, 377, 585, 587, 1334
MwoI GCNNNNNNNGC 5 cut(s) 59, 383, 1165, 1216, 1340
NlaIII CATG 6 cut(s) 313, 541, 617, 1219, 1309, 1412
NmeAIII GCCGAG 1 cut(s) 116
NmuCI GTSAC 5 cut(s) 202, 483, 856, 1033, 1223
NspI RCATGY 1 cut(s) 617
OliI CACNNNNGTG 1 cut(s) 1017
PaqCI CACCTGC 1 cut(s) 1384
PcsI WCGNNNNNNNCGW 4 cut(s) 35, 122, 1191, 1203
PctI GAATGC 1 cut(s) 511
PdmI GAANNNNTTC 1 cut(s) 416
PfeI GAWTC 5 cut(s) 5, 379, 412, 1282, 1301
PinAI ACCGGT 2 cut(s) 925, 1043
PkrI GCNGC 5 cut(s) 376, 468, 589, 873, 1170
Ple19I CGATCG 1 cut(s) 79
PpuMI RGGWCCY 1 cut(s) 1097
PshAI GACNNNNGTC 2 cut(s) 863, 1102
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 3 cut(s) 14, 53, 1099
PspGI CCWGG 3 cut(s) 14, 53, 1099
PspPI GGNCC 5 cut(s) 258, 785, 1097, 1212, 1257
PspPPI RGGWCCY 1 cut(s) 1097
PstNI CAGNNNCTG 1 cut(s) 463
PsuI RGATCY 3 cut(s) 119, 343, 995
PvuI CGATCG 1 cut(s) 79
PvuII CAGCTG 1 cut(s) 1171
RsaI GTAC 6 cut(s) 41, 83, 158, 781, 924, 1331
RsaNI GTAC 6 cut(s) 40, 82, 157, 780, 923, 1330
RseI CAYNNNNRTG 4 cut(s) 308, 756, 854, 1017
SalI GTCGAC 2 cut(s) 761, 884
SaqAI TTAA 2 cut(s) 1164, 1175
SatI GCNGC 5 cut(s) 375, 467, 588, 872, 1169
Sau96I GGNCC 5 cut(s) 258, 785, 1097, 1212, 1257
SduI GDGCHC 1 cut(s) 1318
SfaNI GCATC 1 cut(s) 1299
SfcI CTRYAG 1 cut(s) 455
SinI GGWCC 4 cut(s) 258, 785, 1097, 1212
SmaI CCCGGG 4 cut(s) 277, 390, 1095, 1298
SmiMI CAYNNNNRTG 4 cut(s) 308, 756, 854, 1017
Sse9I AATT 3 cut(s) 101, 213, 578
SsiI CCGC 9 cut(s) 251, 338, 375, 469, 583, 587, 1210, 1255, 1312
SspMI CTAG 3 cut(s) 237, 767, 1414
StyI CCWWGG 4 cut(s) 236, 424, 766, 1260
TaaI ACNGT 5 cut(s) 208, 262, 441, 459, 527
TaiI ACGT 2 cut(s) 891, 1040
TaqI TCGA 7 cut(s) 75, 125, 756, 762, 773, 885, 1245
TasI AATT 3 cut(s) 101, 213, 578
TauI GCSGC 2 cut(s) 377, 590
TfiI GAWTC 5 cut(s) 5, 379, 412, 1282, 1301
Tru1I TTAA 2 cut(s) 1164, 1175
Tru9I TTAA 2 cut(s) 1164, 1175
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 5 cut(s) 202, 483, 856, 1033, 1223
TseI GCWGC 3 cut(s) 466, 871, 1168
Tsp45I GTSAC 5 cut(s) 202, 483, 856, 1033, 1223
TspDTI ATGAA 3 cut(s) 308, 591, 665
TspGWI ACGGA 4 cut(s) 777, 781, 868, 922
TspMI CCCGGG 4 cut(s) 275, 388, 1093, 1296
TspRI CASTG 1 cut(s) 154
VpaK11BI GGWCC 4 cut(s) 258, 785, 1097, 1212
XapI RAATTY 1 cut(s) 578
XceI RCATGY 1 cut(s) 617
XmaI CCCGGG 4 cut(s) 275, 388, 1093, 1296
XmaJI CCTAGG 2 cut(s) 236, 766
XmiI GTMKAC 4 cut(s) 242, 762, 885, 1040
XmnI GAANNNNTTC 1 cut(s) 416
XspI CTAG 3 cut(s) 237, 767, 1414
ZraI GACGTC 1 cut(s) 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.