Rmu_sc0000315.1_g000047

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000315.1
OG0000087
Physical Location & Seq
Reverse (-)
204765 .. 208307
3543 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000315.1_g000047.1.cds

Sequence Viewer

Length: 2343 bp
atgcttcagttcccagcttcagaggcttctgatgctatcttgacgtggcgcgtggcggcgcgtcggtggcgatctggaggcgataccctatggggtagaaaatatgagcctccggtacccgattgggtagacattttaaacctccgactgggttgtgcaataaatggtcgtcccttcgccttccaaggcttcgagaaatgggggaatgcttggaacacgtgtagcgatcctatggctgagggtttttcagtttcgacggccctgatgcattggagattgaatttaagagggaaaccgactgttttccctcactttcgtgaaaaagaagctcagaagacttgggagatttgcatcgaggagaaagggagagccaagggagaagtgctaacccttgtgcttctggttccagatatagcaagatttgaggtccccggtaccgtagttaggatggaatcagaagccaggggtggggatacgggattttcgtaccagtcttctgccagacaagctgaggtagatattgaccggtacttagcccgggtagatcaattagcagagaacacggggtcctcgactagggtgttctcggagagtagtaaggagtccgacgagggtgagagccagggtgaattcgcggaggccccggtagtcacagtggccattcccgagggcattccgaagccgaggtacacacttgcggatgggaccgtatgcgacgaaccccggagacgtatgacaatgaaggagatcatcgacatgcgactgaagtgggggataccgaacgcggtggaacttaggcctcttagggatggagagatggccgcaaatcctgccccagggtgggtggcgctgcacgagaatcaattccaccaagggttatcgctaccgctgccccggtgcctacagtatctgctgcggatgctgaacctgttaccggggcagctgaccccgaatgttgttcgccagatatacagtatgatggctatgtgggacttgtgccaacaagggtggccttccgtaaatgagttcctcgcggtacaccgggtactatactcaaggaagcagtcttgtgcgggtacggttaccttcgccgctagggattacgagccactagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatgctctatccgaagtagaaaggaagaggatagcccgggtatacgccgtttggtcagagaaagagaggagctcttatagattcatccagcactctatactgtataggctagggctagggtggctccccgggtcgaagggtactagtcggtcaattgaagaaacccttctggagatcaccgacgagggatatggtgaacctgaccccgacgcgcccgtgacccacgtctcgcagccctccatggctgatgttataacgatagatgacaccgggatgggaaaagtaccggcccctgtgcctttctcctctcgttccactgggagcgatgaggctctactccctggtactggtgcgaagaggcagaagaaagatcactcgggaccagagtcgtcaccttctcttggcctgttatctcccgccattccggtgatccccaagaagcccatcaagcagttgctgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatatcgacctcgaccgagttcgggccaaggataatactccccaggagaatcgccgtcttgcccgagaatcaatgatgcgggcactcttcaatgtgtacgccattgatgccagcgaggaggatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggacgcattgagggcggagctggccgccgctaagcagcggatcgcggggcttgagggcgaagttgctgaggcccgggaagaggtaaaaaacgcccgggactccgagaaaaaggctgcaaagtctgccgtctcatggaaggagaaagcagaccacctggaggattgccttcccgtggagaggcacgaggccgtgaaggagtacaagtcctcggaagagctcatctctatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcagccggatatttagatgaagctaaattcaggcggggtctgctggagaaaaagaagaaggatcgggaggcggcgaccaagtctggtgccggtgggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

780

Amino Acids

87.37

Weight (kDa)

7.58

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1496
AarI CACCTGC 1 cut(s) 1909
Acc36I ACCTGC 1 cut(s) 1909
Acc65I GGTACC 3 cut(s) 115, 434, 1214
AccB1I GGYRCC 5 cut(s) 115, 434, 897, 1214, 2330
AccBSI CCGCTC 1 cut(s) 1963
AccI GTMKAC 2 cut(s) 129, 1284
AccII CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
AclWI GGATC 5 cut(s) 221, 1666, 1758, 2012, 2313
AcoI YGGCCR 3 cut(s) 657, 819, 1986
AcsI RAATTY 3 cut(s) 280, 629, 2270
AcuI CTGAAG 3 cut(s) 785, 1775, 1910
AcvI CACGTG 1 cut(s) 219
AflIII ACRYGT 2 cut(s) 216, 218
AgeI ACCGGT 2 cut(s) 525, 1211
AgsI TTSAA 4 cut(s) 280, 1400, 1849, 2233
AhlI ACTAGT 2 cut(s) 1111, 1385
AjiI CACGTC 2 cut(s) 45, 1468
AjnI CCWGG 6 cut(s) 461, 621, 835, 1582, 1800, 2118
AleI CACNNNNGTG 1 cut(s) 315
AloI GAACNNNNNNTCC 2 cut(s) 551, 583
Alw21I GWGCWC 2 cut(s) 1316, 2184
Alw26I GTCTC 3 cut(s) 721, 1474, 2098
AlwI GGATC 5 cut(s) 221, 1666, 1758, 2012, 2313
AlwNI CAGNNNCTG 2 cut(s) 910, 1699
Ama87I CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
ApoI RAATTY 3 cut(s) 280, 629, 2270
AsiGI ACCGGT 2 cut(s) 525, 1211
Asp700I GAANNNNTTC 2 cut(s) 863, 1407
Asp718I GGTACC 3 cut(s) 115, 434, 1214
AspLEI GCGC 4 cut(s) 51, 61, 850, 1456
AsuHPI GGTGA 7 cut(s) 626, 638, 1411, 1448, 1626, 1681, 1933
AvaI CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
AvaII GGWCC 6 cut(s) 427, 567, 705, 1234, 1622, 1737
BaeGI GKGCMC 1 cut(s) 1843
BaeI ACNNNNGTAYC 2 cut(s) 426, 459
BalI TGGCCA 1 cut(s) 659
BanI GGYRCC 5 cut(s) 115, 434, 897, 1214, 2330
BanII GRGCYC 2 cut(s) 1316, 2184
BarI GAAGNNNNNNTAC 2 cut(s) 671, 703
BauI CACGAG 2 cut(s) 854, 2147
BbrPI CACGTG 1 cut(s) 219
BbsI GAAGAC 2 cut(s) 341, 486
Bbv12I GWGCWC 2 cut(s) 1316, 2184
BbvCI CCTCAGC 3 cut(s) 237, 510, 2031
BccI CCATC 7 cut(s) 442, 695, 803, 811, 973, 1510, 1694
BceAI ACGGC 5 cut(s) 273, 1274, 1797, 2075, 2138
BciT130I CCWGG 6 cut(s) 463, 623, 837, 1584, 1802, 2120
BciVI GTATCC 3 cut(s) 466, 768, 1873
BcoDI GTCTC 3 cut(s) 721, 1474, 2098
BcuI ACTAGT 2 cut(s) 1111, 1385
BfaI CTAG 7 cut(s) 576, 1095, 1112, 1166, 1352, 1358, 1386
BfmI CTRYAG 1 cut(s) 902
BfoI RGCGCY 1 cut(s) 851
BfuAI ACCTGC 1 cut(s) 1909
BfuI GTATCC 3 cut(s) 466, 768, 1873
BlpI GCTNAGC 1 cut(s) 1995
Bme18I GGWCC 6 cut(s) 427, 567, 705, 1234, 1622, 1737
BmeT110I CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
BmgBI CACGTC 2 cut(s) 45, 1468
BmrI ACTGGG 2 cut(s) 158, 1569
BmsI GCATC 6 cut(s) 22, 255, 360, 909, 1824, 1855
BmuI ACTGGG 2 cut(s) 158, 1569
BoxI GACNNNNGTC 2 cut(s) 1466, 1627
BpiI GAAGAC 2 cut(s) 341, 486
BplI GAGNNNNNCTC 4 cut(s) 1298, 1330, 2171, 2203
BpmI CTGGAG 5 cut(s) 96, 1433, 1973, 2141, 2309
Bpu10I CCTNAGC 3 cut(s) 237, 510, 2031
Bpu1102I GCTNAGC 1 cut(s) 1995
BpuEI CTTGAG 2 cut(s) 1039, 2036
BsaAI YACGTR 1 cut(s) 219
BsaBI GATNNNNATC 2 cut(s) 350, 1884
BsaWI WCCGGW 4 cut(s) 112, 525, 1211, 1666
BsaXI ACNNNNNCTCC 2 cut(s) 2153, 2183
Bse118I RCCGGY 4 cut(s) 525, 1211, 1528, 2333
Bse1I ACTGG 5 cut(s) 153, 490, 1237, 1564, 1594
Bse8I GATNNNNATC 2 cut(s) 350, 1884
BseBI CCWGG 6 cut(s) 463, 623, 837, 1584, 1802, 2120
BseGI GGATG 6 cut(s) 453, 706, 814, 924, 1326, 1521
BseJI GATNNNNATC 2 cut(s) 350, 1884
BseMII CTCAG 5 cut(s) 228, 344, 501, 1691, 2022
BseNI ACTGG 5 cut(s) 153, 490, 1237, 1564, 1594
BseRI GAGGAG 5 cut(s) 371, 1324, 1537, 1889, 1910
BseSI GKGCMC 1 cut(s) 1843
BseYI CCCAGC 2 cut(s) 13, 1169
BsgI GTGCAG 1 cut(s) 836
Bsh1236I CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
Bsh1285I CGRYCG 1 cut(s) 1774
BshNI GGYRCC 5 cut(s) 115, 434, 897, 1214, 2330
BshTI ACCGGT 2 cut(s) 525, 1211
BsiEI CGRYCG 1 cut(s) 1774
BsiHKAI GWGCWC 2 cut(s) 1316, 2184
BsiHKCI CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
BslFI GGGAC 8 cut(s) 156, 413, 718, 1004, 1247, 1635, 1979, 2075
BsmAI GTCTC 3 cut(s) 721, 1474, 2098
BsmBI CGTCTC 3 cut(s) 721, 1474, 2098
BsmFI GGGAC 8 cut(s) 156, 413, 718, 1004, 1247, 1635, 1979, 2075
BsmI GAATGC 2 cut(s) 211, 672
BsoBI CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
Bsp1286I GDGCHC 3 cut(s) 1316, 1843, 2184
Bsp1720I GCTNAGC 1 cut(s) 1995
Bsp19I CCATGG 1 cut(s) 1482
BspCNI CTCAG 5 cut(s) 229, 343, 502, 1692, 2023
BspFNI CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
BspHI TCATGA 1 cut(s) 2223
BspMI ACCTGC 1 cut(s) 1909
BspPI GGATC 5 cut(s) 221, 1666, 1758, 2012, 2313
BspQI GCTCTTC 1 cut(s) 2172
BspT107I GGYRCC 5 cut(s) 115, 434, 897, 1214, 2330
BsrBI CCGCTC 1 cut(s) 1963
BsrFI RCCGGY 4 cut(s) 525, 1211, 1528, 2333
BsrI ACTGG 5 cut(s) 153, 490, 1237, 1564, 1594
BssAI RCCGGY 4 cut(s) 525, 1211, 1528, 2333
BssNAI GTATAC 1 cut(s) 1285
BssSI CACGAG 2 cut(s) 854, 2147
BssT1I CCWWGG 5 cut(s) 184, 372, 871, 1482, 1785
Bst1107I GTATAC 1 cut(s) 1285
Bst2BI CACGAG 2 cut(s) 854, 2147
Bst2UI CCWGG 6 cut(s) 463, 623, 837, 1584, 1802, 2120
Bst4CI ACNGT 8 cut(s) 301, 439, 655, 709, 906, 974, 1081, 1344
Bst6I CTCTTC 5 cut(s) 1262, 1592, 1850, 2037, 2172
BstAPI GCANNNNNTGC 2 cut(s) 830, 2087
BstBAI YACGTR 1 cut(s) 219
BstC8I GCNNGC 4 cut(s) 1839, 1870, 1986, 2196
BstDEI CTNAG 9 cut(s) 237, 330, 510, 532, 794, 803, 1700, 1995, 2031
BstDSI CCRYGG 2 cut(s) 1482, 2136
BstEII GGTNACC 1 cut(s) 1081
BstENI CCTNNNNNAGG 2 cut(s) 574, 834
BstF5I GGATG 6 cut(s) 453, 706, 814, 924, 1326, 1521
BstFNI CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
BstH2I RGCGCY 1 cut(s) 851
BstHHI GCGC 4 cut(s) 51, 61, 850, 1456
BstMAI GTCTC 3 cut(s) 721, 1474, 2098
BstMCI CGRYCG 1 cut(s) 1774
BstNI CCWGG 6 cut(s) 463, 623, 837, 1584, 1802, 2120
BstNSI RCATGY 1 cut(s) 760
BstPAI GACNNNNGTC 2 cut(s) 1466, 1627
BstPI GGTNACC 1 cut(s) 1081
BstSFI CTRYAG 1 cut(s) 902
BstSLI GKGCMC 1 cut(s) 1843
BstUI CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
BstV2I GAAGAC 2 cut(s) 341, 486
BstX2I RGATCY 1 cut(s) 1750
BstYI RGATCY 1 cut(s) 1750
BstZ17I GTATAC 1 cut(s) 1285
BsuI GTATCC 3 cut(s) 466, 768, 1873
BtgI CCRYGG 2 cut(s) 1482, 2136
BtgZI GCGATG 1 cut(s) 1581
BtrI CACGTC 2 cut(s) 45, 1468
BtsCI GGATG 6 cut(s) 453, 706, 814, 924, 1326, 1521
BtsIMutI CAGTG 2 cut(s) 660, 1557
BveI ACCTGC 1 cut(s) 1909
Cac8I GCNNGC 4 cut(s) 1839, 1870, 1986, 2196
CaiI CAGNNNCTG 2 cut(s) 910, 1699
CciI TCATGA 1 cut(s) 2223
CfoI GCGC 4 cut(s) 51, 61, 850, 1456
Cfr10I RCCGGY 4 cut(s) 525, 1211, 1528, 2333
Cfr9I CCCGGG 5 cut(s) 537, 1278, 1370, 2037, 2058
CseI GACGC 3 cut(s) 50, 1460, 1976
CspAI ACCGGT 2 cut(s) 525, 1211
CspCI CAANNNNNGTGG 2 cut(s) 989, 1024
CviAII CATG 6 cut(s) 757, 1483, 1741, 1934, 2097, 2224
DdeI CTNAG 9 cut(s) 237, 330, 510, 532, 794, 803, 1700, 1995, 2031
DraI TTTAAA 1 cut(s) 138
EaeI YGGCCR 3 cut(s) 657, 819, 1986
Eam1104I CTCTTC 5 cut(s) 1262, 1592, 1850, 2037, 2172
EarI CTCTTC 5 cut(s) 1262, 1592, 1850, 2037, 2172
EciI GGCGGA 1 cut(s) 1994
Ecl136II GAGCTC 2 cut(s) 1314, 2182
Eco130I CCWWGG 5 cut(s) 184, 372, 871, 1482, 1785
Eco147I AGGCCT 1 cut(s) 799
Eco24I GRGCYC 2 cut(s) 1316, 2184
Eco32I GATATC 1 cut(s) 1762
Eco47I GGWCC 6 cut(s) 427, 567, 705, 1234, 1622, 1737
Eco53kI GAGCTC 2 cut(s) 1314, 2182
Eco57I CTGAAG 3 cut(s) 785, 1775, 1910
Eco72I CACGTG 1 cut(s) 219
Eco88I CYCGRG 8 cut(s) 537, 665, 1278, 1370, 1618, 1821, 2037, 2058
Eco91I GGTNACC 1 cut(s) 1081
EcoICRI GAGCTC 2 cut(s) 1314, 2182
EcoNI CCTNNNNNAGG 2 cut(s) 574, 834
EcoO109I RGGNCCY 3 cut(s) 427, 567, 640
EcoO65I GGTNACC 1 cut(s) 1081
EcoRI GAATTC 1 cut(s) 629
EcoRII CCWGG 6 cut(s) 461, 621, 835, 1582, 1800, 2118
EcoRV GATATC 1 cut(s) 1762
EcoT14I CCWWGG 5 cut(s) 184, 372, 871, 1482, 1785
EcoT22I ATGCAT 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 1316, 2184
ErhI CCWWGG 5 cut(s) 184, 372, 871, 1482, 1785
Esp3I CGTCTC 3 cut(s) 721, 1474, 2098
FaeI CATG 6 cut(s) 760, 1486, 1744, 1937, 2100, 2227
FalI AAGNNNNNCTT 2 cut(s) 1392, 1424
FaqI GGGAC 8 cut(s) 156, 413, 718, 1004, 1247, 1635, 1979, 2075
FatI CATG 6 cut(s) 756, 1482, 1740, 1933, 2096, 2223
FauI CCCGC 6 cut(s) 1066, 1666, 1830, 1956, 2002, 2271
FblI GTMKAC 2 cut(s) 129, 1284
FokI GGATG 6 cut(s) 460, 713, 821, 931, 1313, 1528
FriOI GRGCYC 2 cut(s) 1316, 2184
FspBI CTAG 7 cut(s) 576, 1095, 1112, 1166, 1352, 1358, 1386
GlaI GCGC 4 cut(s) 50, 60, 849, 1455
GsaI CCCAGC 2 cut(s) 17, 1173
GsuI CTGGAG 5 cut(s) 96, 1433, 1973, 2141, 2309
HaeII RGCGCY 1 cut(s) 851
HgaI GACGC 3 cut(s) 50, 1460, 1976
HhaI GCGC 4 cut(s) 51, 61, 850, 1456
Hin1II CATG 6 cut(s) 760, 1486, 1744, 1937, 2100, 2227
Hin6I GCGC 4 cut(s) 49, 59, 848, 1454
HinP1I GCGC 4 cut(s) 49, 59, 848, 1454
HinfI GANTC 8 cut(s) 452, 602, 859, 1323, 1628, 1807, 1826, 2063
HphI GGTGA 7 cut(s) 626, 638, 1411, 1448, 1626, 1681, 1933
Hpy166II GTNNAC 6 cut(s) 130, 690, 1039, 1285, 1439, 1855
Hpy8I GTNNAC 6 cut(s) 130, 690, 1039, 1285, 1439, 1855
Hpy99I CGWCG 6 cut(s) 66, 259, 611, 719, 1427, 1454
HpyCH4III ACNGT 8 cut(s) 301, 439, 655, 709, 906, 974, 1081, 1344
HpyCH4IV ACGT 4 cut(s) 44, 218, 730, 1467
HpyCH4V TGCA 5 cut(s) 158, 268, 351, 853, 2081
HpyF3I CTNAG 9 cut(s) 237, 330, 510, 532, 794, 803, 1700, 1995, 2031
HpySE526I ACGT 4 cut(s) 44, 218, 730, 1467
Hsp92II CATG 6 cut(s) 760, 1486, 1744, 1937, 2100, 2227
HspAI GCGC 4 cut(s) 49, 59, 848, 1454
KpnI GGTACC 3 cut(s) 119, 438, 1218
LguI GCTCTTC 1 cut(s) 2172
LmnI GCTCC 5 cut(s) 1311, 1371, 1563, 1960, 1981
LweI GCATC 6 cut(s) 22, 255, 360, 909, 1824, 1855
MaeI CTAG 7 cut(s) 576, 1095, 1112, 1166, 1352, 1358, 1386
MaeII ACGT 4 cut(s) 44, 218, 730, 1467
MaeIII GTNAC 6 cut(s) 649, 930, 1081, 1114, 1459, 1632
MbiI CCGCTC 1 cut(s) 1963
MfeI CAATTG 1 cut(s) 1395
MflI RGATCY 1 cut(s) 1750
MhlI GDGCHC 3 cut(s) 1316, 1843, 2184
MlsI TGGCCA 1 cut(s) 659
MluCI AATT 6 cut(s) 280, 548, 629, 863, 1395, 2270
MluNI TGGCCA 1 cut(s) 659
MlyI GAGTC 3 cut(s) 611, 1637, 2057
MmeI TCCRAC 2 cut(s) 169, 630
Mox20I TGGCCA 1 cut(s) 659
Mph1103I ATGCAT 1 cut(s) 270
MroXI GAANNNNTTC 2 cut(s) 863, 1407
MscI TGGCCA 1 cut(s) 659
MseI TTAA 3 cut(s) 137, 284, 1188
MslI CAYNNNNRTG 5 cut(s) 315, 755, 1514, 1667, 2189
Msp20I TGGCCA 1 cut(s) 659
MspA1I CMGCKG 4 cut(s) 889, 943, 1207, 2002
MunI CAATTG 1 cut(s) 1395
Mva1269I GAATGC 2 cut(s) 211, 672
MvaI CCWGG 6 cut(s) 463, 623, 837, 1584, 1802, 2120
MvnI CGCG 7 cut(s) 51, 61, 635, 785, 1034, 1454, 2009
NcoI CCATGG 1 cut(s) 1482
NlaIII CATG 6 cut(s) 760, 1486, 1744, 1937, 2100, 2227
NmeAIII GCCGAG 1 cut(s) 708
NmuCI GTSAC 3 cut(s) 649, 1459, 1632
NsiI ATGCAT 1 cut(s) 270
NspI RCATGY 1 cut(s) 760
OliI CACNNNNGTG 1 cut(s) 315
PagI TCATGA 1 cut(s) 2223
PaqCI CACCTGC 1 cut(s) 1909
PasI CCCWGGG 1 cut(s) 836
PceI AGGCCT 1 cut(s) 799
PciSI GCTCTTC 1 cut(s) 2172
PcsI WCGNNNNNNNCGW 3 cut(s) 482, 569, 1716
PctI GAATGC 2 cut(s) 211, 672
PdmI GAANNNNTTC 2 cut(s) 863, 1407
PfeI GAWTC 5 cut(s) 452, 859, 1323, 1807, 1826
PflFI GACNNNGTC 1 cut(s) 2323
PinAI ACCGGT 2 cut(s) 525, 1211
PleI GAGTC 3 cut(s) 610, 1636, 2057
PmaCI CACGTG 1 cut(s) 219
PmlI CACGTG 1 cut(s) 219
PpsI GAGTC 3 cut(s) 610, 1636, 2057
Ppu21I YACGTR 1 cut(s) 219
PpuMI RGGWCCY 2 cut(s) 427, 567
PshAI GACNNNNGTC 2 cut(s) 1466, 1627
PsiI TTATAA 1 cut(s) 1496
Psp124BI GAGCTC 2 cut(s) 1316, 2184
Psp5II RGGWCCY 2 cut(s) 427, 567
Psp6I CCWGG 6 cut(s) 461, 621, 835, 1582, 1800, 2118
PspCI CACGTG 1 cut(s) 219
PspEI GGTNACC 1 cut(s) 1081
PspFI CCCAGC 2 cut(s) 13, 1169
PspGI CCWGG 6 cut(s) 461, 621, 835, 1582, 1800, 2118
PspPPI RGGWCCY 2 cut(s) 427, 567
PstNI CAGNNNCTG 2 cut(s) 910, 1699
PsuI RGATCY 1 cut(s) 1750
PsyI GACNNNGTC 1 cut(s) 2323
PvuII CAGCTG 2 cut(s) 943, 1207
RseI CAYNNNNRTG 5 cut(s) 315, 755, 1514, 1667, 2189
SacI GAGCTC 2 cut(s) 1316, 2184
SapI GCTCTTC 1 cut(s) 2172
SaqAI TTAA 3 cut(s) 137, 284, 1188
SchI GAGTC 3 cut(s) 611, 1637, 2057
SduI GDGCHC 3 cut(s) 1316, 1843, 2184
SfaNI GCATC 6 cut(s) 22, 255, 360, 909, 1824, 1855
SfcI CTRYAG 1 cut(s) 902
SinI GGWCC 6 cut(s) 427, 567, 705, 1234, 1622, 1737
SmaI CCCGGG 5 cut(s) 539, 1280, 1372, 2039, 2060
SmiMI CAYNNNNRTG 5 cut(s) 315, 755, 1514, 1667, 2189
SmlI CTYRAG 2 cut(s) 1054, 2015
SmoI CTYRAG 2 cut(s) 1054, 2015
SpeI ACTAGT 2 cut(s) 1111, 1385
Sse9I AATT 6 cut(s) 280, 548, 629, 863, 1395, 2270
SseBI AGGCCT 1 cut(s) 799
SspMI CTAG 7 cut(s) 576, 1095, 1112, 1166, 1352, 1358, 1386
SstI GAGCTC 2 cut(s) 1316, 2184
StuI AGGCCT 1 cut(s) 799
StyI CCWWGG 5 cut(s) 184, 372, 871, 1482, 1785
TaaI ACNGT 8 cut(s) 301, 439, 655, 709, 906, 974, 1081, 1344
TaiI ACGT 4 cut(s) 47, 221, 733, 1470
TaqI TCGA 9 cut(s) 192, 254, 354, 572, 753, 1133, 1376, 1764, 1770
TaqII GACCGA 2 cut(s) 1380, 1788
TasI AATT 6 cut(s) 280, 548, 629, 863, 1395, 2270
TatI WGTACW 1 cut(s) 2163
TauI GCSGC 6 cut(s) 59, 824, 1094, 1991, 1994, 2318
TfiI GAWTC 5 cut(s) 452, 859, 1323, 1807, 1826
Tru1I TTAA 3 cut(s) 137, 284, 1188
Tru9I TTAA 3 cut(s) 137, 284, 1188
TscAI CASTG 2 cut(s) 660, 1564
TseFI GTSAC 3 cut(s) 649, 1459, 1632
Tsp45I GTSAC 3 cut(s) 649, 1459, 1632
TspDTI ATGAA 6 cut(s) 755, 1315, 1737, 1922, 2240, 2277
TspGWI ACGGA 1 cut(s) 1006
TspMI CCCGGG 5 cut(s) 537, 1278, 1370, 2037, 2058
TspRI CASTG 2 cut(s) 660, 1564
Tth111I GACNNNGTC 1 cut(s) 2323
VpaK11BI GGWCC 6 cut(s) 427, 567, 705, 1234, 1622, 1737
XagI CCTNNNNNAGG 2 cut(s) 574, 834
XapI RAATTY 3 cut(s) 280, 629, 2270
XceI RCATGY 1 cut(s) 760
XmaI CCCGGG 5 cut(s) 537, 1278, 1370, 2037, 2058
XmiI GTMKAC 2 cut(s) 129, 1284
XmnI GAANNNNTTC 2 cut(s) 863, 1407
XspI CTAG 7 cut(s) 576, 1095, 1112, 1166, 1352, 1358, 1386
Zsp2I ATGCAT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.