Rmu_sc0006945.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006945.1
OG0000087
Physical Location & Seq
Forward (+)
4849 .. 6819
1971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006945.1_g000001.1.cds

Sequence Viewer

Length: 1440 bp
atgaaggagatcatcgccatgcgactgaagtggggaataccggaagcggtggagcttaggcctctcagggatggagagatggccgcgaatcctgccccgggtatgatggccatgtgggacttgtgccaacaatggtggccttccgtaaatgaattccgcgcgatacacagggttctgtactcaaggaagctgtcctgtgcgggtacggttacatttgccgctagggattacgaacgactagttaccgacatgccttcgtcgatgagcaaaaggcctatacttatccgaggtagaaaggaagaggatagcccggtgaaagcgccgaagaggaaacctcggaaaggcaaagaggaggacagaatggatgatgatcaattgatggatatgctgatgggccagggagaagacgcccttcacatcgatgtcgacctaggatcgaaaggtatgggtcggtccgttgaagagaccctactggagatcaccgatgcgggatatggggaacctgatcctgacgctcccgtgacccaagtcgtgcagccctctgttgctgacgtcatcacgatagatgatgccgggacgggaaaggtaccagcccccgtgtctatttcctcttgttccactggaagcgatgaggcattgcttcccggtgaaaagaaaagatcccataggcaccggcaccgaagtgataagcaagaggtgacgtataccggccgggatgttcaggggttcggtgtgaagaggcagaagaaagatcacccgggaccagagtggtcgccttcgcttggcttgttgtctcctgccattccggtaatccccaagaagcatatcaagcagctattgagtgagtacggggttgccggtgaaaagttcgtgcggtccatgcttagtcacctgaaggacattgacctcgacagggtgcgggccaaggacaacacgcccaaagagaatcgctgtctctcccgtgaatccatgatgcgggcactcttcaatgtgtacgcgattgatgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggcaagaaggccaagctggaaaaggagcgggactcattgatggctgagatggacgcggctaagcagcgaatcgtggagcttgagggtgaagtctctgaggcgcgggaagaggtgaaaagcgctcgggactctgagaaaaaagctacagagtctgccgtgtcatggaaggagaaggcagactacctggaggatcgcagactacctggagaaccacgaggccatggaggattcaaggagtgggtggcgaccgggtacctggatgaagccaaattcaggcggggtcttctagagaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccggtgggtcccagagtatcggtggcgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

479

Amino Acids

53.51

Weight (kDa)

6.87

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1048
AatII GACGTC 1 cut(s) 555
Acc36I ACCTGC 1 cut(s) 1048
Acc65I GGTACC 2 cut(s) 586, 1326
AccB1I GGYRCC 5 cut(s) 586, 669, 675, 1326, 1403
AccBSI CCGCTC 1 cut(s) 1102
AccI GTMKAC 2 cut(s) 426, 704
AccII CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
AclWI GGATC 4 cut(s) 442, 500, 654, 1272
AcoI YGGCCR 3 cut(s) 81, 108, 709
AcsI RAATTY 2 cut(s) 152, 1343
AcuI CTGAAG 3 cut(s) 47, 914, 1049
AcyI GRCGYC 2 cut(s) 408, 552
AfaI GTAC 6 cut(s) 179, 205, 588, 848, 995, 1328
AfeI AGCGCT 1 cut(s) 1195
AfiI CCNNNNNNNGG 7 cut(s) 98, 341, 782, 913, 975, 1236, 1347
AgsI TTSAA 3 cut(s) 461, 988, 1306
AhlI ACTAGT 1 cut(s) 238
AjnI CCWGG 4 cut(s) 396, 1257, 1276, 1329
AleI CACNNNNGTG 1 cut(s) 681
AluBI AGCT 6 cut(s) 55, 190, 835, 1090, 1153, 1217
AluI AGCT 6 cut(s) 55, 190, 835, 1090, 1153, 1217
Alw26I GTCTC 4 cut(s) 458, 798, 959, 1171
AlwI GGATC 4 cut(s) 442, 500, 654, 1272
AlwNI CAGNNNCTG 1 cut(s) 1226
Ama87I CYCGRG 3 cut(s) 97, 757, 1197
Aor51HI AGCGCT 1 cut(s) 1195
ApeKI GCWGC 3 cut(s) 535, 832, 1138
ApoI RAATTY 2 cut(s) 152, 1343
Asp718I GGTACC 2 cut(s) 586, 1326
AspA2I CCTAGG 1 cut(s) 430
AspLEI GCGC 4 cut(s) 161, 322, 1177, 1196
AspS9I GGNCC 6 cut(s) 394, 453, 761, 876, 921, 1413
AvaI CYCGRG 3 cut(s) 97, 757, 1197
AvaII GGWCC 4 cut(s) 453, 761, 876, 1413
AvrII CCTAGG 1 cut(s) 430
BaeGI GKGCMC 1 cut(s) 982
BalI TGGCCA 1 cut(s) 110
BanI GGYRCC 5 cut(s) 586, 669, 675, 1326, 1403
BarI GAAGNNNNNNTAC 4 cut(s) 453, 485, 1238, 1270
BauI CACGAG 1 cut(s) 1287
BbsI GAAGAC 2 cut(s) 411, 1349
BbvI GCAGC 3 cut(s) 547, 844, 1150
BccI CCATC 7 cut(s) 65, 73, 100, 373, 385, 1108, 1117
BceAI ACGGC 1 cut(s) 1214
BciT130I CCWGG 4 cut(s) 398, 1259, 1278, 1331
BclI TGATCA 1 cut(s) 370
BcoDI GTCTC 4 cut(s) 458, 798, 959, 1171
BcuI ACTAGT 1 cut(s) 238
BfaI CTAG 4 cut(s) 222, 239, 431, 1361
BfmI CTRYAG 1 cut(s) 1218
BfoI RGCGCY 2 cut(s) 323, 1197
BfuAI ACCTGC 1 cut(s) 1048
BisI GCNGC 7 cut(s) 84, 219, 536, 833, 1131, 1139, 1389
BlnI CCTAGG 1 cut(s) 430
BlpI GCTNAGC 1 cut(s) 1134
BlsI GCNGC 7 cut(s) 85, 220, 537, 834, 1132, 1140, 1390
Bme18I GGWCC 4 cut(s) 453, 761, 876, 1413
BmeT110I CYCGRG 3 cut(s) 97, 757, 1197
BmgT120I GGNCC 6 cut(s) 394, 453, 761, 876, 921, 1413
BmiI GGNNCC 9 cut(s) 501, 588, 671, 677, 762, 1328, 1405, 1414, 1415
BmsI GCATC 4 cut(s) 475, 559, 963, 994
BoxI GACNNNNGTC 1 cut(s) 527
BpiI GAAGAC 2 cut(s) 411, 1349
BplI GAGNNNNNCTC 4 cut(s) 319, 351, 1091, 1123
BpmI CTGGAG 3 cut(s) 494, 1280, 1299
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 2 cut(s) 166, 1175
Bsa29I ATCGAT 1 cut(s) 420
BsaBI GATNNNNATC 2 cut(s) 369, 1023
BsaHI GRCGYC 2 cut(s) 408, 552
BsaI GGTCTC 1 cut(s) 458
BsaJI CCNNGG 9 cut(s) 96, 97, 286, 335, 397, 430, 757, 924, 1294
BsaWI WCCGGW 2 cut(s) 40, 805
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 341, 782, 913, 975, 1236, 1347
Bse118I RCCGGY 4 cut(s) 672, 707, 857, 1406
Bse1I ACTGG 2 cut(s) 477, 625
Bse3DI GCAATG 1 cut(s) 635
Bse8I GATNNNNATC 2 cut(s) 369, 1023
BseBI CCWGG 4 cut(s) 398, 1259, 1278, 1331
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 9 cut(s) 96, 97, 286, 335, 397, 430, 757, 924, 1294
BseGI GGATG 4 cut(s) 76, 370, 721, 1339
BseJI GATNNNNATC 2 cut(s) 369, 1023
BseLI CCNNNNNNNGG 7 cut(s) 98, 341, 782, 913, 975, 1236, 1347
BseMI GCAATG 1 cut(s) 635
BseMII CTCAG 4 cut(s) 79, 1110, 1161, 1197
BseNI ACTGG 2 cut(s) 477, 625
BseRI GAGGAG 2 cut(s) 365, 1049
BseSI GKGCMC 1 cut(s) 982
BseX3I CGGCCG 1 cut(s) 709
BseXI GCAGC 3 cut(s) 547, 844, 1150
BsgI GTGCAG 1 cut(s) 554
Bsh1236I CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
Bsh1285I CGRYCG 2 cut(s) 712, 1323
BshNI GGYRCC 5 cut(s) 586, 669, 675, 1326, 1403
BshVI ATCGAT 1 cut(s) 420
BsiEI CGRYCG 2 cut(s) 712, 1323
BsiHKCI CYCGRG 3 cut(s) 97, 757, 1197
BslFI GGGAC 6 cut(s) 131, 589, 774, 1118, 1214, 1399
BslI CCNNNNNNNGG 7 cut(s) 98, 341, 782, 913, 975, 1236, 1347
BsmAI GTCTC 4 cut(s) 458, 798, 959, 1171
BsmFI GGGAC 6 cut(s) 131, 589, 774, 1118, 1214, 1399
Bso31I GGTCTC 1 cut(s) 458
BsoBI CYCGRG 3 cut(s) 97, 757, 1197
Bsp1286I GDGCHC 1 cut(s) 982
Bsp143I GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
Bsp1720I GCTNAGC 1 cut(s) 1134
Bsp19I CCATGG 1 cut(s) 1294
BspCNI CTCAG 4 cut(s) 78, 1111, 1162, 1198
BspDI ATCGAT 1 cut(s) 420
BspFNI CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
BspLI GGNNCC 9 cut(s) 501, 588, 671, 677, 762, 1328, 1405, 1414, 1415
BspMI ACCTGC 1 cut(s) 1048
BspPI GGATC 4 cut(s) 442, 500, 654, 1272
BspT107I GGYRCC 5 cut(s) 586, 669, 675, 1326, 1403
BspTNI GGTCTC 1 cut(s) 458
BsrBI CCGCTC 1 cut(s) 1102
BsrDI GCAATG 1 cut(s) 635
BsrFI RCCGGY 4 cut(s) 672, 707, 857, 1406
BsrI ACTGG 2 cut(s) 477, 625
BssAI RCCGGY 4 cut(s) 672, 707, 857, 1406
BssECI CCNNGG 9 cut(s) 96, 97, 286, 335, 397, 430, 757, 924, 1294
BssMI GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
BssNAI GTATAC 1 cut(s) 705
BssNI GRCGYC 2 cut(s) 408, 552
BssSI CACGAG 1 cut(s) 1287
BssT1I CCWWGG 3 cut(s) 430, 924, 1294
Bst1107I GTATAC 1 cut(s) 705
Bst2BI CACGAG 1 cut(s) 1287
Bst2UI CCWGG 4 cut(s) 398, 1259, 1278, 1331
Bst4CI ACNGT 1 cut(s) 208
Bst6I CTCTTC 6 cut(s) 294, 320, 456, 731, 989, 1176
BstACI GRCGYC 2 cut(s) 408, 552
BstC8I GCNNGC 4 cut(s) 921, 978, 1009, 1433
BstDEI CTNAG 7 cut(s) 56, 65, 884, 1119, 1134, 1170, 1206
BstDSI CCRYGG 1 cut(s) 1294
BstENI CCTNNNNNAGG 1 cut(s) 339
BstF5I GGATG 4 cut(s) 76, 370, 721, 1339
BstFNI CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
BstH2I RGCGCY 2 cut(s) 323, 1197
BstHHI GCGC 4 cut(s) 161, 322, 1177, 1196
BstKTI GATC 9 cut(s) 12, 373, 437, 480, 508, 662, 754, 1267, 1381
BstMAI GTCTC 4 cut(s) 458, 798, 959, 1171
BstMBI GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
BstMCI CGRYCG 2 cut(s) 712, 1323
BstMWI GCNNNNNNNGC 4 cut(s) 92, 829, 880, 1004
BstNI CCWGG 4 cut(s) 398, 1259, 1278, 1331
BstNSI RCATGY 1 cut(s) 253
BstPAI GACNNNNGTC 1 cut(s) 527
BstSFI CTRYAG 1 cut(s) 1218
BstSLI GKGCMC 1 cut(s) 982
BstUI CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
BstV1I GCAGC 3 cut(s) 547, 844, 1150
BstV2I GAAGAC 2 cut(s) 411, 1349
BstX2I RGATCY 1 cut(s) 659
BstYI RGATCY 1 cut(s) 659
BstZ17I GTATAC 1 cut(s) 705
BstZI CGGCCG 1 cut(s) 709
Bsu15I ATCGAT 1 cut(s) 420
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 1 cut(s) 1294
BtgZI GCGATG 1 cut(s) 642
BtsCI GGATG 4 cut(s) 76, 370, 721, 1339
BtsIMutI CAGTG 1 cut(s) 618
BveI ACCTGC 1 cut(s) 1048
Cac8I GCNNGC 4 cut(s) 921, 978, 1009, 1433
CaiI CAGNNNCTG 1 cut(s) 1226
CfoI GCGC 4 cut(s) 161, 322, 1177, 1196
Cfr10I RCCGGY 4 cut(s) 672, 707, 857, 1406
Cfr13I GGNCC 6 cut(s) 394, 453, 761, 876, 921, 1413
Cfr9I CCCGGG 2 cut(s) 97, 757
ClaI ATCGAT 1 cut(s) 420
CpoI CGGWCCG 1 cut(s) 453
CseI GACGC 3 cut(s) 416, 521, 1136
Csp6I GTAC 6 cut(s) 178, 204, 587, 847, 994, 1327
CspCI CAANNNNNGTGG 2 cut(s) 116, 151
CspI CGGWCCG 1 cut(s) 453
CviAII CATG 8 cut(s) 19, 112, 250, 880, 970, 1073, 1236, 1295
CviQI GTAC 6 cut(s) 178, 204, 587, 847, 994, 1327
DdeI CTNAG 7 cut(s) 56, 65, 884, 1119, 1134, 1170, 1206
DpnI GATC 9 cut(s) 11, 372, 436, 479, 507, 661, 753, 1266, 1380
DpnII GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
EaeI YGGCCR 3 cut(s) 81, 108, 709
EagI CGGCCG 1 cut(s) 709
Eam1104I CTCTTC 6 cut(s) 294, 320, 456, 731, 989, 1176
EarI CTCTTC 6 cut(s) 294, 320, 456, 731, 989, 1176
EclXI CGGCCG 1 cut(s) 709
Eco130I CCWWGG 3 cut(s) 430, 924, 1294
Eco147I AGGCCT 2 cut(s) 61, 274
Eco31I GGTCTC 1 cut(s) 458
Eco47I GGWCC 4 cut(s) 453, 761, 876, 1413
Eco47III AGCGCT 1 cut(s) 1195
Eco52I CGGCCG 1 cut(s) 709
Eco57I CTGAAG 3 cut(s) 47, 914, 1049
Eco88I CYCGRG 3 cut(s) 97, 757, 1197
EcoNI CCTNNNNNAGG 1 cut(s) 339
EcoO109I RGGNCCY 1 cut(s) 1413
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 4 cut(s) 396, 1257, 1276, 1329
EcoT14I CCWWGG 3 cut(s) 430, 924, 1294
ErhI CCWWGG 3 cut(s) 430, 924, 1294
FaeI CATG 8 cut(s) 22, 115, 253, 883, 973, 1076, 1239, 1298
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FaqI GGGAC 6 cut(s) 131, 589, 774, 1118, 1214, 1399
FatI CATG 8 cut(s) 18, 111, 249, 879, 969, 1072, 1235, 1294
FauI CCCGC 7 cut(s) 193, 481, 912, 969, 1095, 1170, 1344
FbaI TGATCA 1 cut(s) 370
FblI GTMKAC 2 cut(s) 426, 704
Fnu4HI GCNGC 7 cut(s) 84, 219, 536, 833, 1131, 1139, 1389
FokI GGATG 4 cut(s) 83, 377, 728, 1346
Fsp4HI GCNGC 7 cut(s) 84, 219, 536, 833, 1131, 1139, 1389
FspBI CTAG 4 cut(s) 222, 239, 431, 1361
GlaI GCGC 4 cut(s) 160, 321, 1176, 1195
GluI GCNGC 7 cut(s) 84, 219, 536, 833, 1131, 1139, 1389
GsuI CTGGAG 3 cut(s) 494, 1280, 1299
HaeII RGCGCY 2 cut(s) 323, 1197
HgaI GACGC 3 cut(s) 416, 521, 1136
HhaI GCGC 4 cut(s) 161, 322, 1177, 1196
Hin1I GRCGYC 2 cut(s) 408, 552
Hin1II CATG 8 cut(s) 22, 115, 253, 883, 973, 1076, 1239, 1298
Hin6I GCGC 4 cut(s) 159, 320, 1175, 1194
HinP1I GCGC 4 cut(s) 159, 320, 1175, 1194
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HinfI GANTC 8 cut(s) 88, 946, 965, 1106, 1143, 1202, 1223, 1302
Hpy166II GTNNAC 3 cut(s) 427, 705, 994
Hpy188I TCNGA 5 cut(s) 287, 339, 1029, 1171, 1207
Hpy188III TCNNGA 5 cut(s) 509, 559, 1199, 1361, 1382
Hpy8I GTNNAC 3 cut(s) 427, 705, 994
Hpy99I CGWCG 1 cut(s) 262
HpyAV CCTTC 9 cut(s) 150, 264, 422, 786, 889, 1024, 1075, 1234, 1240
HpyCH4III ACNGT 1 cut(s) 208
HpyCH4IV ACGT 2 cut(s) 552, 701
HpyCH4V TGCA 2 cut(s) 535, 1072
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 829, 880, 1004
HpyF3I CTNAG 7 cut(s) 56, 65, 884, 1119, 1134, 1170, 1206
HpySE526I ACGT 2 cut(s) 552, 701
Hsp92I GRCGYC 2 cut(s) 408, 552
Hsp92II CATG 8 cut(s) 22, 115, 253, 883, 973, 1076, 1239, 1298
HspAI GCGC 4 cut(s) 159, 320, 1175, 1194
KflI GGGWCCC 1 cut(s) 1413
KpnI GGTACC 2 cut(s) 590, 1330
Ksp22I TGATCA 1 cut(s) 370
Kzo9I GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
LmnI GCTCC 4 cut(s) 52, 520, 1099, 1150
Lsp1109I GCAGC 3 cut(s) 547, 844, 1150
LweI GCATC 4 cut(s) 475, 559, 963, 994
MaeI CTAG 4 cut(s) 222, 239, 431, 1361
MaeII ACGT 2 cut(s) 552, 701
MaeIII GTNAC 5 cut(s) 208, 241, 520, 697, 887
MalI GATC 9 cut(s) 11, 372, 436, 479, 507, 661, 753, 1266, 1380
MbiI CCGCTC 1 cut(s) 1102
MboI GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
MfeI CAATTG 1 cut(s) 374
MflI RGATCY 1 cut(s) 659
MhlI GDGCHC 1 cut(s) 982
MlsI TGGCCA 1 cut(s) 110
MluCI AATT 3 cut(s) 152, 374, 1343
MluNI TGGCCA 1 cut(s) 110
MlyI GAGTC 3 cut(s) 1100, 1196, 1232
Mox20I TGGCCA 1 cut(s) 110
MscI TGGCCA 1 cut(s) 110
MslI CAYNNNNRTG 3 cut(s) 17, 420, 681
Msp20I TGGCCA 1 cut(s) 110
MunI CAATTG 1 cut(s) 374
MvaI CCWGG 4 cut(s) 398, 1259, 1278, 1331
MvnI CGCG 6 cut(s) 86, 159, 161, 998, 1130, 1177
MwoI GCNNNNNNNGC 4 cut(s) 92, 829, 880, 1004
NcoI CCATGG 1 cut(s) 1294
NdeII GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
NlaIII CATG 8 cut(s) 22, 115, 253, 883, 973, 1076, 1239, 1298
NlaIV GGNNCC 9 cut(s) 501, 588, 671, 677, 762, 1328, 1405, 1414, 1415
NmuCI GTSAC 3 cut(s) 520, 697, 887
NspI RCATGY 1 cut(s) 253
OliI CACNNNNGTG 1 cut(s) 681
PaqCI CACCTGC 1 cut(s) 1048
PceI AGGCCT 2 cut(s) 61, 274
PfeI GAWTC 5 cut(s) 88, 946, 965, 1143, 1302
PkrI GCNGC 7 cut(s) 85, 220, 537, 834, 1132, 1140, 1390
PleI GAGTC 3 cut(s) 1100, 1196, 1231
PpsI GAGTC 3 cut(s) 1100, 1196, 1231
PpuMI RGGWCCY 1 cut(s) 1413
PshAI GACNNNNGTC 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 1413
Psp6I CCWGG 4 cut(s) 396, 1257, 1276, 1329
PspGI CCWGG 4 cut(s) 396, 1257, 1276, 1329
PspN4I GGNNCC 9 cut(s) 501, 588, 671, 677, 762, 1328, 1405, 1414, 1415
PspPI GGNCC 6 cut(s) 394, 453, 761, 876, 921, 1413
PspPPI RGGWCCY 1 cut(s) 1413
PstNI CAGNNNCTG 1 cut(s) 1226
PsuI RGATCY 1 cut(s) 659
RsaI GTAC 6 cut(s) 179, 205, 588, 848, 995, 1328
RsaNI GTAC 6 cut(s) 178, 204, 587, 847, 994, 1327
RseI CAYNNNNRTG 3 cut(s) 17, 420, 681
Rsr2I CGGWCCG 1 cut(s) 453
RsrII CGGWCCG 1 cut(s) 453
SalI GTCGAC 1 cut(s) 425
SatI GCNGC 7 cut(s) 84, 219, 536, 833, 1131, 1139, 1389
Sau3AI GATC 9 cut(s) 9, 370, 434, 477, 505, 659, 751, 1264, 1378
Sau96I GGNCC 6 cut(s) 394, 453, 761, 876, 921, 1413
SchI GAGTC 3 cut(s) 1100, 1196, 1232
SduI GDGCHC 1 cut(s) 982
SfaNI GCATC 4 cut(s) 475, 559, 963, 994
SfcI CTRYAG 1 cut(s) 1218
SinI GGWCC 4 cut(s) 453, 761, 876, 1413
SmaI CCCGGG 2 cut(s) 99, 759
SmiMI CAYNNNNRTG 3 cut(s) 17, 420, 681
SmlI CTYRAG 2 cut(s) 181, 1154
SmoI CTYRAG 2 cut(s) 181, 1154
SpeI ACTAGT 1 cut(s) 238
Sse9I AATT 3 cut(s) 152, 374, 1343
SseBI AGGCCT 2 cut(s) 61, 274
SspMI CTAG 4 cut(s) 222, 239, 431, 1361
StuI AGGCCT 2 cut(s) 61, 274
StyI CCWWGG 3 cut(s) 430, 924, 1294
TaaI ACNGT 1 cut(s) 208
TaiI ACGT 2 cut(s) 555, 704
TaqI TCGA 5 cut(s) 260, 420, 426, 437, 909
TaqII GACCGA 1 cut(s) 441
TasI AATT 3 cut(s) 152, 374, 1343
TatI WGTACW 1 cut(s) 177
TauI GCSGC 4 cut(s) 86, 221, 1133, 1391
TfiI GAWTC 5 cut(s) 88, 946, 965, 1143, 1302
TscAI CASTG 1 cut(s) 625
TseFI GTSAC 3 cut(s) 520, 697, 887
TseI GCWGC 3 cut(s) 535, 832, 1138
Tsp45I GTSAC 3 cut(s) 520, 697, 887
TspDTI ATGAA 3 cut(s) 17, 165, 1350
TspGWI ACGGA 2 cut(s) 133, 445
TspMI CCCGGG 2 cut(s) 97, 757
TspRI CASTG 1 cut(s) 625
VpaK11BI GGWCC 4 cut(s) 453, 761, 876, 1413
XagI CCTNNNNNAGG 1 cut(s) 339
XapI RAATTY 2 cut(s) 152, 1343
XbaI TCTAGA 1 cut(s) 1360
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 1424
XmaI CCCGGG 2 cut(s) 97, 757
XmaJI CCTAGG 1 cut(s) 430
XmiI GTMKAC 2 cut(s) 426, 704
XspI CTAG 4 cut(s) 222, 239, 431, 1361
ZraI GACGTC 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.