Rmu_sc0003032.1_g000023

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003032.1
OG0000087
Physical Location & Seq
Reverse (-)
92532 .. 95370
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003032.1_g000023.1.cds

Sequence Viewer

Length: 2343 bp
atgggaggacacatgggacacgtgcagcgatcctacggcagaggtcgtttcggtttcgacggtcctgatgcgttggagattgaatttaagagggaaactgactgtttgccctcacttttctcgaaaaagaagctcgagagatttggaaggtttgcagcgaagagaaagggagaaccaagggagtattatatagcaagatttgaggtccccagtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcgagctgaaatggacatcgaccggtacctaggccgggtagaccaattagcagagaacacggggttctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagttatagtggccattcccgagggaattccgaagccgaggtacacacttgcggatgggaccgtatgcgatgaacctgggagaagcatgacgatgaaggagatagtagacatgcggctgaagtgggggataccggacgtagaagagcttaggcctcttagggatggggaactggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctaccccttccccggtgcctacagtatctgctgcagatgctgaacctgtcaccagggcagctaaccccgaatgccattcgccaaatatacagtatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgtgcggtacaccgggtactgtattctaggaagcggtcttgtgcgggtacggtgacctttgccgctagggattacgagccgctagttaccaatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggtggtggcagataaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatacgctatccgaagtacaaaagaagaggatagcccgggtatatgccgtgtggtcagagaaagagaggagctcttataggttcatccggcactctatactttttaggctagggttagggtggctccccgtgaaagccccaaagaggaaaccccggaaaggcaaggaggaggataggatggatgatgctcaattaatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtccatcgaagaggccctgttggagataaccgatgagggatacggtgaacctgatcccgacgctcctgtgacccacgccgcgcagccctccatggccgatgtcatcacgatagctgacaccggggtgggaaaagtaccggcctcagtgcccatttcctctcgttccactgggagcgatgaggtgttactccccggtgagaagaaaagatcccacaagcaccggcatcgaaccgataaggaggtgacgtacactggccgggatgtccagggtaccagtgcgaagaggcagaagaaagatcatccgggatcagggctgtcgccctctcttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaatacggcgttgccgatgaaaagttcctgcggtccatgcttggggatctgaaggacattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggagtcaatgatgcgggcactcttcaatatgtacgccatcgacgccagcgaggaagatactcatctgaaagaggaggttagcaatctctctgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccacctctaaccagcggattgcagagcttgagggtgaggttgctgaggcgcgggaggaggtcaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaaatcctcagataagcttatcgccatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcagccggttacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcgggcaagtccggtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

780

Amino Acids

87.28

Weight (kDa)

8.01

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1882
AatII GACGTC 1 cut(s) 1263
Acc36I ACCTGC 1 cut(s) 1882
Acc65I GGTACC 3 cut(s) 306, 992, 1559
AccB1I GGYRCC 5 cut(s) 306, 675, 992, 1559, 2303
AccBSI CCGCTC 2 cut(s) 1936, 2281
AccI GTMKAC 3 cut(s) 321, 531, 1263
AccII CGCG 3 cut(s) 1370, 2011, 2111
AclWI GGATC 8 cut(s) 24, 265, 415, 1337, 1491, 1603, 1731, 2106
AcoI YGGCCR 6 cut(s) 435, 597, 759, 1383, 1543, 1959
AcsI RAATTY 3 cut(s) 83, 450, 2243
AcuI CTGAAG 2 cut(s) 563, 1748
AcvI CACGTG 1 cut(s) 22
AcyI GRCGYC 2 cut(s) 1260, 1839
AflIII ACRYGT 1 cut(s) 19
AgeI ACCGGT 2 cut(s) 303, 989
AgsI TTSAA 2 cut(s) 83, 1822
AhdI GACNNNNNGTC 1 cut(s) 1270
AjnI CCWGG 8 cut(s) 239, 278, 499, 712, 1233, 1554, 1773, 2259
AleI CACNNNNGTG 1 cut(s) 1412
Alw21I GWGCWC 1 cut(s) 1094
Alw26I GTCTC 4 cut(s) 1793, 2071, 2261, 2319
AlwI GGATC 8 cut(s) 24, 265, 415, 1337, 1491, 1603, 1731, 2106
AlwNI CAGNNNCTG 4 cut(s) 688, 700, 1672, 2060
Ama87I CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
ApoI RAATTY 3 cut(s) 83, 450, 2243
AseI ATTAAT 1 cut(s) 1214
AsiGI ACCGGT 2 cut(s) 303, 989
Asp718I GGTACC 3 cut(s) 306, 992, 1559
AspA2I CCTAGG 2 cut(s) 310, 1267
AspLEI GCGC 3 cut(s) 628, 1372, 2011
AspS9I GGNCC 9 cut(s) 62, 205, 418, 483, 769, 1012, 1290, 1303, 1710
AsuHPI GGTGA 8 cut(s) 404, 702, 871, 1346, 1496, 1543, 1906, 2006
AvaI CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
AvaII GGWCC 7 cut(s) 62, 205, 483, 769, 1012, 1290, 1710
AvrII CCTAGG 2 cut(s) 310, 1267
BaeGI GKGCMC 2 cut(s) 1440, 1816
BalI TGGCCA 3 cut(s) 437, 761, 1961
BanI GGYRCC 5 cut(s) 306, 675, 992, 1559, 2303
BanII GRGCYC 1 cut(s) 1094
BarI GAAGNNNNNNTAC 2 cut(s) 449, 481
BauI CACGAG 3 cut(s) 632, 1282, 2120
BbrPI CACGTG 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 1 cut(s) 1094
BbvCI CCTCAGC 1 cut(s) 2004
BceAI ACGGC 7 cut(s) 52, 1052, 1619, 1699, 1770, 2048, 2111
BcgI CGANNNNNNTGC 2 cut(s) 1496, 1530
BciT130I CCWGG 8 cut(s) 241, 280, 501, 714, 1235, 1556, 1775, 2261
BciVI GTATCC 3 cut(s) 244, 546, 1322
BcoDI GTCTC 4 cut(s) 1793, 2071, 2261, 2319
BfaI CTAG 7 cut(s) 311, 834, 873, 890, 944, 1130, 1268
BfmI CTRYAG 3 cut(s) 680, 692, 2052
BfoI RGCGCY 1 cut(s) 629
BfuAI ACCTGC 1 cut(s) 1882
BfuI GTATCC 3 cut(s) 244, 546, 1322
BglI GCCNNNNNGGC 1 cut(s) 2168
BlnI CCTAGG 2 cut(s) 310, 1267
Bme18I GGWCC 7 cut(s) 62, 205, 483, 769, 1012, 1290, 1710
BmeRI GACNNNNNGTC 1 cut(s) 1270
BmeT110I CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
BmgT120I GGNCC 9 cut(s) 62, 205, 418, 483, 769, 1012, 1290, 1303, 1710
BmrI ACTGGG 3 cut(s) 204, 363, 1467
BmsI GCATC 6 cut(s) 58, 687, 1195, 1234, 1522, 1797
BmuI ACTGGG 3 cut(s) 204, 363, 1467
BpiI GAAGAC 1 cut(s) 264
BplI GAGNNNNNCTC 4 cut(s) 1076, 1108, 1925, 1957
BpmI CTGGAG 3 cut(s) 1946, 2114, 2282
Bpu10I CCTNAGC 2 cut(s) 572, 2004
BpuEI CTTGAG 1 cut(s) 2009
BsaAI YACGTR 1 cut(s) 22
BsaBI GATNNNNATC 2 cut(s) 1857, 2331
BsaHI GRCGYC 2 cut(s) 1260, 1839
BsaI GGTCTC 2 cut(s) 2261, 2319
BsaWI WCCGGW 5 cut(s) 303, 556, 989, 1639, 2300
BsaXI ACNNNNNCTCC 2 cut(s) 1520, 1550
Bse118I RCCGGY 6 cut(s) 303, 989, 1426, 1509, 2222, 2306
Bse1I ACTGG 8 cut(s) 210, 268, 358, 600, 1015, 1462, 1546, 1563
Bse8I GATNNNNATC 2 cut(s) 1857, 2331
BseBI CCWGG 8 cut(s) 241, 280, 501, 714, 1235, 1556, 1775, 2261
BseGI GGATG 8 cut(s) 231, 484, 592, 1104, 1203, 1207, 1555, 1588
BseJI GATNNNNATC 2 cut(s) 1857, 2331
BseMII CTCAG 5 cut(s) 1446, 1944, 1995, 2160, 2330
BseNI ACTGG 8 cut(s) 210, 268, 358, 600, 1015, 1462, 1546, 1563
BseRI GAGGAG 5 cut(s) 1102, 1202, 1883, 2030, 2147
BseSI GKGCMC 2 cut(s) 1440, 1816
BsgI GTGCAG 3 cut(s) 44, 614, 1235
Bsh1236I CGCG 3 cut(s) 1370, 2011, 2111
Bsh1285I CGRYCG 2 cut(s) 304, 1747
BshNI GGYRCC 5 cut(s) 306, 675, 992, 1559, 2303
BshTI ACCGGT 2 cut(s) 303, 989
BsiEI CGRYCG 2 cut(s) 304, 1747
BsiHKAI GWGCWC 1 cut(s) 1094
BsiHKCI CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
BslFI GGGAC 7 cut(s) 30, 191, 496, 782, 1025, 1952, 2048
BsmAI GTCTC 4 cut(s) 1793, 2071, 2261, 2319
BsmBI CGTCTC 2 cut(s) 1793, 2071
BsmFI GGGAC 7 cut(s) 30, 191, 496, 782, 1025, 1952, 2048
BsmI GAATGC 1 cut(s) 736
Bso31I GGTCTC 2 cut(s) 2261, 2319
BsoBI CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
Bsp1286I GDGCHC 3 cut(s) 1094, 1440, 1816
Bsp19I CCATGG 1 cut(s) 1380
BspCNI CTCAG 5 cut(s) 1445, 1945, 1996, 2159, 2329
BspFNI CGCG 3 cut(s) 1370, 2011, 2111
BspHI TCATGA 1 cut(s) 2196
BspMAI CTGCAG 2 cut(s) 696, 2056
BspMI ACCTGC 1 cut(s) 1882
BspPI GGATC 8 cut(s) 24, 265, 415, 1337, 1491, 1603, 1731, 2106
BspQI GCTCTTC 1 cut(s) 561
BspT107I GGYRCC 5 cut(s) 306, 675, 992, 1559, 2303
BspTNI GGTCTC 2 cut(s) 2261, 2319
BsrBI CCGCTC 2 cut(s) 1936, 2281
BsrFI RCCGGY 6 cut(s) 303, 989, 1426, 1509, 2222, 2306
BsrI ACTGG 8 cut(s) 210, 268, 358, 600, 1015, 1462, 1546, 1563
BssAI RCCGGY 6 cut(s) 303, 989, 1426, 1509, 2222, 2306
BssNI GRCGYC 2 cut(s) 1260, 1839
BssSI CACGAG 3 cut(s) 632, 1282, 2120
BssT1I CCWWGG 5 cut(s) 176, 310, 649, 1267, 1380
Bst2BI CACGAG 3 cut(s) 632, 1282, 2120
Bst2UI CCWGG 8 cut(s) 241, 280, 501, 714, 1235, 1556, 1775, 2261
Bst4CI ACNGT 9 cut(s) 62, 104, 217, 487, 684, 752, 828, 859, 1334
Bst6I CTCTTC 6 cut(s) 155, 561, 1040, 1293, 1565, 1823
BstACI GRCGYC 2 cut(s) 1260, 1839
BstAPI GCANNNNNTGC 2 cut(s) 608, 2060
BstBAI YACGTR 1 cut(s) 22
BstC8I GCNNGC 6 cut(s) 285, 779, 1812, 1843, 2169, 2293
BstDEI CTNAG 8 cut(s) 572, 581, 1432, 1953, 2004, 2146, 2230, 2316
BstDSI CCRYGG 3 cut(s) 1380, 2109, 2127
BstEII GGTNACC 1 cut(s) 859
BstF5I GGATG 8 cut(s) 231, 484, 592, 1104, 1203, 1207, 1555, 1588
BstFNI CGCG 3 cut(s) 1370, 2011, 2111
BstH2I RGCGCY 1 cut(s) 629
BstHHI GCGC 3 cut(s) 628, 1372, 2011
BstMAI GTCTC 4 cut(s) 1793, 2071, 2261, 2319
BstMCI CGRYCG 2 cut(s) 304, 1747
BstNI CCWGG 8 cut(s) 241, 280, 501, 714, 1235, 1556, 1775, 2261
BstNSI RCATGY 2 cut(s) 538, 1225
BstPI GGTNACC 1 cut(s) 859
BstSFI CTRYAG 3 cut(s) 680, 692, 2052
BstSLI GKGCMC 2 cut(s) 1440, 1816
BstUI CGCG 3 cut(s) 1370, 2011, 2111
BstV2I GAAGAC 1 cut(s) 264
BstX2I RGATCY 3 cut(s) 407, 1496, 1723
BstYI RGATCY 3 cut(s) 407, 1496, 1723
BsuI GTATCC 3 cut(s) 244, 546, 1322
BtgI CCRYGG 3 cut(s) 1380, 2109, 2127
BtgZI GCGATG 2 cut(s) 507, 1479
BtsCI GGATG 8 cut(s) 231, 484, 592, 1104, 1203, 1207, 1555, 1588
BtsIMutI CAGTG 4 cut(s) 1440, 1455, 1539, 1570
BveI ACCTGC 1 cut(s) 1882
Cac8I GCNNGC 6 cut(s) 285, 779, 1812, 1843, 2169, 2293
CaiI CAGNNNCTG 4 cut(s) 688, 700, 1672, 2060
CciI TCATGA 1 cut(s) 2196
CfoI GCGC 3 cut(s) 628, 1372, 2011
Cfr10I RCCGGY 6 cut(s) 303, 989, 1426, 1509, 2222, 2306
Cfr13I GGNCC 9 cut(s) 62, 205, 418, 483, 769, 1012, 1290, 1303, 1710
Cfr42I CCGCGG 1 cut(s) 2112
Cfr9I CCCGGG 4 cut(s) 613, 1056, 1794, 2031
CseI GACGC 2 cut(s) 1358, 1847
CspAI ACCGGT 2 cut(s) 303, 989
DdeI CTNAG 8 cut(s) 572, 581, 1432, 1953, 2004, 2146, 2230, 2316
DriI GACNNNNNGTC 1 cut(s) 1270
EaeI YGGCCR 6 cut(s) 435, 597, 759, 1383, 1543, 1959
Eam1104I CTCTTC 6 cut(s) 155, 561, 1040, 1293, 1565, 1823
Eam1105I GACNNNNNGTC 1 cut(s) 1270
EarI CTCTTC 6 cut(s) 155, 561, 1040, 1293, 1565, 1823
Ecl136II GAGCTC 1 cut(s) 1092
Eco130I CCWWGG 5 cut(s) 176, 310, 649, 1267, 1380
Eco147I AGGCCT 1 cut(s) 577
Eco24I GRGCYC 1 cut(s) 1094
Eco31I GGTCTC 2 cut(s) 2261, 2319
Eco47I GGWCC 7 cut(s) 62, 205, 483, 769, 1012, 1290, 1710
Eco53kI GAGCTC 1 cut(s) 1092
Eco57I CTGAAG 2 cut(s) 563, 1748
Eco72I CACGTG 1 cut(s) 22
Eco88I CYCGRG 6 cut(s) 134, 443, 613, 1056, 1794, 2031
Eco91I GGTNACC 1 cut(s) 859
EcoICRI GAGCTC 1 cut(s) 1092
EcoO109I RGGNCCY 4 cut(s) 205, 418, 769, 1303
EcoO65I GGTNACC 1 cut(s) 859
EcoRI GAATTC 1 cut(s) 450
EcoRII CCWGG 8 cut(s) 239, 278, 499, 712, 1233, 1554, 1773, 2259
EcoT14I CCWWGG 5 cut(s) 176, 310, 649, 1267, 1380
EcoT38I GRGCYC 1 cut(s) 1094
ErhI CCWWGG 5 cut(s) 176, 310, 649, 1267, 1380
Esp3I CGTCTC 2 cut(s) 1793, 2071
FaqI GGGAC 7 cut(s) 30, 191, 496, 782, 1025, 1952, 2048
FauI CCCGC 9 cut(s) 844, 1639, 1803, 1929, 2004, 2116, 2244, 2274, 2284
FblI GTMKAC 3 cut(s) 321, 531, 1263
FokI GGATG 8 cut(s) 238, 491, 599, 1091, 1210, 1214, 1562, 1575
FriOI GRGCYC 1 cut(s) 1094
FspBI CTAG 7 cut(s) 311, 834, 873, 890, 944, 1130, 1268
GlaI GCGC 3 cut(s) 627, 1371, 2010
GsuI CTGGAG 3 cut(s) 1946, 2114, 2282
HaeII RGCGCY 1 cut(s) 629
HgaI GACGC 2 cut(s) 1358, 1847
HhaI GCGC 3 cut(s) 628, 1372, 2011
Hin1I GRCGYC 2 cut(s) 1260, 1839
Hin6I GCGC 3 cut(s) 626, 1370, 2009
HinP1I GCGC 3 cut(s) 626, 1370, 2009
HincII GTYRAC 1 cut(s) 1264
HindII GTYRAC 1 cut(s) 1264
HindIII AAGCTT 1 cut(s) 2153
HphI GGTGA 8 cut(s) 404, 702, 871, 1346, 1496, 1543, 1906, 2006
Hpy166II GTNNAC 7 cut(s) 322, 468, 532, 817, 1264, 1337, 1539
Hpy8I GTNNAC 7 cut(s) 322, 468, 532, 817, 1264, 1337, 1539
Hpy99I CGWCG 7 cut(s) 62, 265, 389, 1262, 1265, 1352, 1841
HpyCH4III ACNGT 9 cut(s) 62, 104, 217, 487, 684, 752, 828, 859, 1334
HpyCH4IV ACGT 4 cut(s) 21, 561, 1260, 1535
HpyCH4V TGCA 7 cut(s) 25, 155, 631, 694, 1252, 1982, 2054
HpyF3I CTNAG 8 cut(s) 572, 581, 1432, 1953, 2004, 2146, 2230, 2316
HpySE526I ACGT 4 cut(s) 21, 561, 1260, 1535
Hsp92I GRCGYC 2 cut(s) 1260, 1839
HspAI GCGC 3 cut(s) 626, 1370, 2009
KpnI GGTACC 3 cut(s) 310, 996, 1563
KspI CCGCGG 1 cut(s) 2112
LguI GCTCTTC 1 cut(s) 561
LmnI GCTCC 7 cut(s) 648, 1089, 1149, 1357, 1461, 1933, 2278
LweI GCATC 6 cut(s) 58, 687, 1195, 1234, 1522, 1797
MaeI CTAG 7 cut(s) 311, 834, 873, 890, 944, 1130, 1268
MaeII ACGT 4 cut(s) 21, 561, 1260, 1535
MaeIII GTNAC 7 cut(s) 708, 859, 892, 1357, 1473, 1531, 2225
MbiI CCGCTC 2 cut(s) 1936, 2281
MflI RGATCY 3 cut(s) 407, 1496, 1723
MhlI GDGCHC 3 cut(s) 1094, 1440, 1816
MlsI TGGCCA 3 cut(s) 437, 761, 1961
MluCI AATT 5 cut(s) 83, 326, 450, 1211, 2243
MluNI TGGCCA 3 cut(s) 437, 761, 1961
MlyI GAGTC 7 cut(s) 389, 1294, 1808, 1934, 2030, 2066, 2081
MmeI TCCRAC 3 cut(s) 54, 408, 1290
Mox20I TGGCCA 3 cut(s) 437, 761, 1961
MscI TGGCCA 3 cut(s) 437, 761, 1961
MseI TTAA 3 cut(s) 87, 1214, 2205
MslI CAYNNNNRTG 3 cut(s) 515, 1226, 1412
Msp20I TGGCCA 3 cut(s) 437, 761, 1961
MspA1I CMGCKG 4 cut(s) 985, 1669, 1975, 2111
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 8 cut(s) 241, 280, 501, 714, 1235, 1556, 1775, 2261
MvnI CGCG 3 cut(s) 1370, 2011, 2111
NcoI CCATGG 1 cut(s) 1380
NmeAIII GCCGAG 1 cut(s) 486
NmuCI GTSAC 4 cut(s) 708, 859, 1357, 1531
NspI RCATGY 2 cut(s) 538, 1225
OliI CACNNNNGTG 1 cut(s) 1412
PaeR7I CTCGAG 1 cut(s) 134
PagI TCATGA 1 cut(s) 2196
PaqCI CACCTGC 1 cut(s) 1882
PceI AGGCCT 1 cut(s) 577
PciSI GCTCTTC 1 cut(s) 561
PcsI WCGNNNNNNNCGW 5 cut(s) 260, 347, 1280, 1689, 1842
PctI GAATGC 1 cut(s) 736
PfeI GAWTC 3 cut(s) 230, 637, 1780
PfoI TCCNGGA 2 cut(s) 1591, 2259
PinAI ACCGGT 2 cut(s) 303, 989
PleI GAGTC 7 cut(s) 388, 1293, 1807, 1934, 2030, 2065, 2081
PmaCI CACGTG 1 cut(s) 22
PmlI CACGTG 1 cut(s) 22
PpsI GAGTC 7 cut(s) 388, 1293, 1807, 1934, 2030, 2065, 2081
Ppu21I YACGTR 1 cut(s) 22
PpuMI RGGWCCY 2 cut(s) 205, 769
PshBI ATTAAT 1 cut(s) 1214
Psp124BI GAGCTC 1 cut(s) 1094
Psp5II RGGWCCY 2 cut(s) 205, 769
Psp6I CCWGG 8 cut(s) 239, 278, 499, 712, 1233, 1554, 1773, 2259
PspCI CACGTG 1 cut(s) 22
PspEI GGTNACC 1 cut(s) 859
PspGI CCWGG 8 cut(s) 239, 278, 499, 712, 1233, 1554, 1773, 2259
PspPI GGNCC 9 cut(s) 62, 205, 418, 483, 769, 1012, 1290, 1303, 1710
PspPPI RGGWCCY 2 cut(s) 205, 769
PstI CTGCAG 2 cut(s) 696, 2056
PstNI CAGNNNCTG 4 cut(s) 688, 700, 1672, 2060
PsuI RGATCY 3 cut(s) 407, 1496, 1723
PvuII CAGCTG 2 cut(s) 985, 1669
RseI CAYNNNNRTG 3 cut(s) 515, 1226, 1412
SacI GAGCTC 1 cut(s) 1094
SacII CCGCGG 1 cut(s) 2112
SalI GTCGAC 1 cut(s) 1262
SapI GCTCTTC 1 cut(s) 561
SaqAI TTAA 3 cut(s) 87, 1214, 2205
Sau96I GGNCC 9 cut(s) 62, 205, 418, 483, 769, 1012, 1290, 1303, 1710
SchI GAGTC 7 cut(s) 389, 1294, 1808, 1934, 2030, 2066, 2081
SduI GDGCHC 3 cut(s) 1094, 1440, 1816
SfaNI GCATC 6 cut(s) 58, 687, 1195, 1234, 1522, 1797
SfcI CTRYAG 3 cut(s) 680, 692, 2052
Sfr274I CTCGAG 1 cut(s) 134
Sfr303I CCGCGG 1 cut(s) 2112
SgrBI CCGCGG 1 cut(s) 2112
SinI GGWCC 7 cut(s) 62, 205, 483, 769, 1012, 1290, 1710
SlaI CTCGAG 1 cut(s) 134
SmaI CCCGGG 4 cut(s) 615, 1058, 1796, 2033
SmiMI CAYNNNNRTG 3 cut(s) 515, 1226, 1412
SmlI CTYRAG 2 cut(s) 134, 1988
SmoI CTYRAG 2 cut(s) 134, 1988
Sse9I AATT 5 cut(s) 83, 326, 450, 1211, 2243
SseBI AGGCCT 1 cut(s) 577
SspMI CTAG 7 cut(s) 311, 834, 873, 890, 944, 1130, 1268
SstI GAGCTC 1 cut(s) 1094
StuI AGGCCT 1 cut(s) 577
StyI CCWWGG 5 cut(s) 176, 310, 649, 1267, 1380
TaaI ACNGT 9 cut(s) 62, 104, 217, 487, 684, 752, 828, 859, 1334
TaiI ACGT 4 cut(s) 24, 564, 1263, 1538
TaqII GACCGA 1 cut(s) 1278
TasI AATT 5 cut(s) 83, 326, 450, 1211, 2243
TatI WGTACW 2 cut(s) 1036, 2136
TauI GCSGC 6 cut(s) 541, 602, 872, 889, 1370, 2291
TfiI GAWTC 3 cut(s) 230, 637, 1780
Tru1I TTAA 3 cut(s) 87, 1214, 2205
Tru9I TTAA 3 cut(s) 87, 1214, 2205
TscAI CASTG 4 cut(s) 1440, 1462, 1546, 1570
TseFI GTSAC 4 cut(s) 708, 859, 1357, 1531
Tsp45I GTSAC 4 cut(s) 708, 859, 1357, 1531
TspDTI ATGAA 8 cut(s) 510, 533, 1093, 1692, 1710, 1895, 2213, 2250
TspGWI ACGGA 1 cut(s) 797
TspMI CCCGGG 4 cut(s) 613, 1056, 1794, 2031
TspRI CASTG 4 cut(s) 1440, 1462, 1546, 1570
VpaK11BI GGWCC 7 cut(s) 62, 205, 483, 769, 1012, 1290, 1710
VspI ATTAAT 1 cut(s) 1214
XapI RAATTY 3 cut(s) 83, 450, 2243
XceI RCATGY 2 cut(s) 538, 1225
XhoI CTCGAG 1 cut(s) 134
XmaI CCCGGG 4 cut(s) 613, 1056, 1794, 2031
XmaJI CCTAGG 2 cut(s) 310, 1267
XmiI GTMKAC 3 cut(s) 321, 531, 1263
XspI CTAG 7 cut(s) 311, 834, 873, 890, 944, 1130, 1268
ZraI GACGTC 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.