Rmu_sc0002206.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002206.1
OG0000087
Physical Location & Seq
Reverse (-)
110527 .. 111923
1397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002206.1_g000032.1.cds

Sequence Viewer

Length: 1248 bp
atgtgggaattgtgccagcaagggtggccttccataaatgaatttcgcgcggtacacagggttctgtactcaaggaatcaatcgtgtataggtaccgtgacgtttgccgccagggactacgagcccttagttaccgatatgcctacctcaatgagcaaaaggtggaggaataaagtatttcttgctggagggcggtggcaaattaagaataagaaatggcacctgaccggtactttccaagctatcggggaccaggcctattcattatccgagttggaaaggaaaaggatagcccgggtatacgctgtttggagtgaggaggagagaagctcttatagattcatctggtacgccatacttgataggctagggctagggagactccccgtgaaagcgtcgaaaaggaagccccagaaaggtaaagaggacgacagaatggacgataaccagttgatggacatgttgatgagccagggagaagacgcccttcacattgaagtcgacctagagttgaaggctacgggttgctccgttgaagaaaccctactagagatcactgatggaggatacggggagccagaccctgatgctcccgtgacccaagtcgagcagccttttgccgggaatgttgtcatcatagatgatcccggaagggaaaaggcaccggttgttgtatctctctcttctcggtctgctggaaacgatgaagtcttgcttccaggtgagaagaagagatcacataggcaccggcaccgaagcgaggataagcaggaggtgacctataccggccggtatgtcaaagaatccgtggtgaagaggcagaagaaaaatcaatcgggaccagagtcgccgctctcgcttggcatgttgtctccttccataccagtaatccctaagaagcccattaaacaactgttgagcgagtacggggttgctgatgaaaagttcgtgcagtccatgctcgccgacctgaaggatatagacctcgatcgggtgagggccagagacaataccccgcaagagaatcgacgccttgctcgggagtcaatgatgcgggcacttttcaatgtgtacgcgattgatgccagcgaggaagatacgcacctgaaggaggaggttagcagtctctccgggcaggtgaagtatctgcatggggagaaggccaagatggagaaggagcaggagtccttgaaagagaagattaagtccttgactccgatggttaccaagcaggatgcggcgaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

415

Amino Acids

47.31

Weight (kDa)

8.19

Isoelectric Point (pI)

55.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1126
Acc36I ACCTGC 1 cut(s) 1126
Acc65I GGTACC 1 cut(s) 92
AccB1I GGYRCC 5 cut(s) 92, 219, 661, 744, 750
AccB7I CCANNNNNTGG 1 cut(s) 454
AccBSI CCGCTC 1 cut(s) 853
AccI GTMKAC 2 cut(s) 300, 501
AccII CGCG 3 cut(s) 48, 50, 1076
AciI CCGC 7 cut(s) 50, 108, 193, 851, 1016, 1054, 1238
AclWI GGATC 1 cut(s) 638
AcoI YGGCCR 1 cut(s) 787
AcsI RAATTY 1 cut(s) 41
AcuI CTGAAG 2 cut(s) 992, 1127
AcyI GRCGYC 2 cut(s) 483, 1030
AfaI GTAC 7 cut(s) 54, 68, 94, 232, 350, 926, 1073
AfiI CCNNNNNNNGG 7 cut(s) 416, 454, 620, 760, 991, 1039, 1111
AflIII ACRYGT 1 cut(s) 459
AgeI ACCGGT 2 cut(s) 227, 664
AgsI TTSAA 5 cut(s) 497, 514, 536, 1066, 1192
AjnI CCWGG 4 cut(s) 110, 252, 471, 718
AluBI AGCT 2 cut(s) 242, 330
AluI AGCT 2 cut(s) 242, 330
Alw26I GTCTC 4 cut(s) 373, 876, 999, 1130
AlwI GGATC 1 cut(s) 638
AlwNI CAGNNNCTG 1 cut(s) 584
Ama87I CYCGRG 2 cut(s) 294, 1038
AoxI GGCC 5 cut(s) 26, 255, 787, 999, 1161
ApeKI GCWGC 1 cut(s) 610
ApoI RAATTY 1 cut(s) 41
AsiGI ACCGGT 2 cut(s) 227, 664
Asp718I GGTACC 1 cut(s) 92
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 3 cut(s) 250, 839, 999
AsuC2I CCSGG 5 cut(s) 295, 296, 622, 648, 1132
AsuHPI GGTGA 5 cut(s) 734, 787, 823, 1006, 1150
AvaI CYCGRG 2 cut(s) 294, 1038
AvaII GGWCC 2 cut(s) 250, 839
BaeGI GKGCMC 1 cut(s) 1060
BanI GGYRCC 5 cut(s) 92, 219, 661, 744, 750
BanII GRGCYC 1 cut(s) 126
BarI GAAGNNNNNNTAC 2 cut(s) 528, 560
BbsI GAAGAC 1 cut(s) 486
BbvI GCAGC 1 cut(s) 622
BccI CCATC 4 cut(s) 448, 554, 1162, 1213
BcgI CGANNNNNNTGC 2 cut(s) 1007, 1041
BciT130I CCWGG 4 cut(s) 112, 254, 473, 720
BciVI GTATCC 1 cut(s) 560
BcnI CCSGG 5 cut(s) 295, 296, 622, 648, 1132
BcoDI GTCTC 4 cut(s) 373, 876, 999, 1130
BfaI CTAG 4 cut(s) 368, 374, 506, 548
BfuAI ACCTGC 1 cut(s) 1126
BfuI GTATCC 1 cut(s) 560
BisI GCNGC 4 cut(s) 108, 611, 851, 1239
BlsI GCNGC 4 cut(s) 109, 612, 852, 1240
Bme1390I CCNGG 9 cut(s) 112, 254, 295, 296, 473, 622, 648, 720, 1132
Bme18I GGWCC 2 cut(s) 250, 839
BmeT110I CYCGRG 2 cut(s) 294, 1038
BmgT120I GGNCC 3 cut(s) 250, 839, 999
BmiI GGNNCC 8 cut(s) 94, 221, 251, 576, 663, 746, 752, 840
BmrFI CCNGG 9 cut(s) 112, 254, 295, 296, 473, 622, 648, 720, 1132
BmsI GCATC 4 cut(s) 577, 1041, 1072, 1225
BoxI GACNNNNGTC 2 cut(s) 602, 844
BpiI GAAGAC 1 cut(s) 486
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BpmI CTGGAG 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 55
BpuMI CCSGG 5 cut(s) 295, 296, 622, 648, 1132
BsaHI GRCGYC 2 cut(s) 483, 1030
BsaJI CCNNGG 4 cut(s) 111, 294, 472, 807
BsaWI WCCGGW 2 cut(s) 227, 664
BsaXI ACNNNNNCTCC 2 cut(s) 1169, 1199
Bsc4I CCNNNNNNNGG 7 cut(s) 416, 454, 620, 760, 991, 1039, 1111
Bse118I RCCGGY 5 cut(s) 227, 664, 747, 785, 789
Bse1I ACTGG 2 cut(s) 448, 884
BseBI CCWGG 4 cut(s) 112, 254, 473, 720
BseDI CCNNGG 4 cut(s) 111, 294, 472, 807
BseGI GGATG 1 cut(s) 1240
BseLI CCNNNNNNNGG 7 cut(s) 416, 454, 620, 760, 991, 1039, 1111
BseNI ACTGG 2 cut(s) 448, 884
BseRI GAGGAG 3 cut(s) 332, 335, 1127
BseSI GKGCMC 1 cut(s) 1060
BseX3I CGGCCG 1 cut(s) 787
BseXI GCAGC 1 cut(s) 622
BsgI GTGCAG 1 cut(s) 971
Bsh1236I CGCG 3 cut(s) 48, 50, 1076
Bsh1285I CGRYCG 2 cut(s) 790, 991
BshFI GGCC 5 cut(s) 28, 257, 789, 1001, 1163
BshNI GGYRCC 5 cut(s) 92, 219, 661, 744, 750
BshTI ACCGGT 2 cut(s) 227, 664
BsiEI CGRYCG 2 cut(s) 790, 991
BsiHKCI CYCGRG 2 cut(s) 294, 1038
BsiSI CCGG 9 cut(s) 228, 295, 621, 648, 665, 748, 786, 790, 1131
BslFI GGGAC 3 cut(s) 128, 263, 852
BslI CCNNNNNNNGG 7 cut(s) 416, 454, 620, 760, 991, 1039, 1111
BsmAI GTCTC 4 cut(s) 373, 876, 999, 1130
BsmFI GGGAC 3 cut(s) 128, 263, 852
BsnI GGCC 5 cut(s) 28, 257, 789, 1001, 1163
BsoBI CYCGRG 2 cut(s) 294, 1038
Bsp1286I GDGCHC 2 cut(s) 126, 1060
Bsp143I GATC 4 cut(s) 552, 643, 734, 988
BspACI CCGC 7 cut(s) 50, 108, 193, 851, 1016, 1054, 1238
BspANI GGCC 5 cut(s) 28, 257, 789, 1001, 1163
BspFNI CGCG 3 cut(s) 48, 50, 1076
BspLI GGNNCC 8 cut(s) 94, 221, 251, 576, 663, 746, 752, 840
BspMI ACCTGC 1 cut(s) 1126
BspPI GGATC 1 cut(s) 638
BspT107I GGYRCC 5 cut(s) 92, 219, 661, 744, 750
BsrBI CCGCTC 1 cut(s) 853
BsrFI RCCGGY 5 cut(s) 227, 664, 747, 785, 789
BsrI ACTGG 2 cut(s) 448, 884
BssAI RCCGGY 5 cut(s) 227, 664, 747, 785, 789
BssECI CCNNGG 4 cut(s) 111, 294, 472, 807
BssMI GATC 4 cut(s) 552, 643, 734, 988
BssNAI GTATAC 1 cut(s) 301
BssNI GRCGYC 2 cut(s) 483, 1030
Bst1107I GTATAC 1 cut(s) 301
Bst2UI CCWGG 4 cut(s) 112, 254, 473, 720
Bst4CI ACNGT 2 cut(s) 97, 915
Bst6I CTCTTC 3 cut(s) 688, 725, 809
BstACI GRCGYC 2 cut(s) 483, 1030
BstAPI GCANNNNNTGC 1 cut(s) 958
BstC8I GCNNGC 4 cut(s) 17, 963, 1056, 1087
BstDEI CTNAG 2 cut(s) 127, 894
BstDSI CCRYGG 1 cut(s) 807
BstEII GGTNACC 2 cut(s) 775, 1222
BstENI CCTNNNNNAGG 1 cut(s) 1109
BstF5I GGATG 1 cut(s) 1240
BstFNI CGCG 3 cut(s) 48, 50, 1076
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 4 cut(s) 555, 646, 737, 991
BstMAI GTCTC 4 cut(s) 373, 876, 999, 1130
BstMBI GATC 4 cut(s) 552, 643, 734, 988
BstMCI CGRYCG 2 cut(s) 790, 991
BstMWI GCNNNNNNNGC 4 cut(s) 25, 856, 958, 1082
BstNI CCWGG 4 cut(s) 112, 254, 473, 720
BstNSI RCATGY 2 cut(s) 463, 868
BstPAI GACNNNNGTC 2 cut(s) 602, 844
BstPI GGTNACC 2 cut(s) 775, 1222
BstSCI CCNGG 9 cut(s) 110, 252, 293, 294, 471, 620, 646, 718, 1130
BstSLI GKGCMC 1 cut(s) 1060
BstUI CGCG 3 cut(s) 48, 50, 1076
BstV1I GCAGC 1 cut(s) 622
BstV2I GAAGAC 1 cut(s) 486
BstZ17I GTATAC 1 cut(s) 301
BstZI CGGCCG 1 cut(s) 787
BsuI GTATCC 1 cut(s) 560
BsuRI GGCC 5 cut(s) 28, 257, 789, 1001, 1163
BtgI CCRYGG 1 cut(s) 807
BtsCI GGATG 1 cut(s) 1240
BtsIMutI CAGTG 1 cut(s) 555
BveI ACCTGC 1 cut(s) 1126
Cac8I GCNNGC 4 cut(s) 17, 963, 1056, 1087
CaiI CAGNNNCTG 1 cut(s) 584
CfoI GCGC 1 cut(s) 50
Cfr10I RCCGGY 5 cut(s) 227, 664, 747, 785, 789
Cfr13I GGNCC 3 cut(s) 250, 839, 999
Cfr9I CCCGGG 1 cut(s) 294
CseI GACGC 3 cut(s) 384, 491, 1038
Csp6I GTAC 7 cut(s) 53, 67, 93, 231, 349, 925, 1072
CspAI ACCGGT 2 cut(s) 227, 664
CviAII CATG 4 cut(s) 460, 865, 958, 1151
CviQI GTAC 7 cut(s) 53, 67, 93, 231, 349, 925, 1072
DdeI CTNAG 2 cut(s) 127, 894
DpnI GATC 4 cut(s) 554, 645, 736, 990
DpnII GATC 4 cut(s) 552, 643, 734, 988
EaeI YGGCCR 1 cut(s) 787
EagI CGGCCG 1 cut(s) 787
Eam1104I CTCTTC 3 cut(s) 688, 725, 809
EarI CTCTTC 3 cut(s) 688, 725, 809
EclXI CGGCCG 1 cut(s) 787
Eco147I AGGCCT 1 cut(s) 257
Eco24I GRGCYC 1 cut(s) 126
Eco47I GGWCC 2 cut(s) 250, 839
Eco52I CGGCCG 1 cut(s) 787
Eco57I CTGAAG 2 cut(s) 992, 1127
Eco88I CYCGRG 2 cut(s) 294, 1038
Eco91I GGTNACC 2 cut(s) 775, 1222
EcoNI CCTNNNNNAGG 1 cut(s) 1109
EcoO65I GGTNACC 2 cut(s) 775, 1222
EcoRII CCWGG 4 cut(s) 110, 252, 471, 718
EcoT38I GRGCYC 1 cut(s) 126
FaeI CATG 4 cut(s) 463, 868, 961, 1154
FalI AAGNNNNNCTT 6 cut(s) 165, 197, 471, 503, 699, 731
FaqI GGGAC 3 cut(s) 128, 263, 852
FatI CATG 4 cut(s) 459, 864, 957, 1150
FauI CCCGC 2 cut(s) 1023, 1047
FblI GTMKAC 2 cut(s) 300, 501
Fnu4HI GCNGC 4 cut(s) 108, 611, 851, 1239
FriOI GRGCYC 1 cut(s) 126
Fsp4HI GCNGC 4 cut(s) 108, 611, 851, 1239
FspBI CTAG 4 cut(s) 368, 374, 506, 548
GlaI GCGC 1 cut(s) 49
GluI GCNGC 4 cut(s) 108, 611, 851, 1239
GsuI CTGGAG 1 cut(s) 207
HaeIII GGCC 5 cut(s) 28, 257, 789, 1001, 1163
HapII CCGG 9 cut(s) 228, 295, 621, 648, 665, 748, 786, 790, 1131
HgaI GACGC 3 cut(s) 384, 491, 1038
HhaI GCGC 1 cut(s) 50
Hin1I GRCGYC 2 cut(s) 483, 1030
Hin1II CATG 4 cut(s) 463, 868, 961, 1154
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HincII GTYRAC 1 cut(s) 502
HindII GTYRAC 1 cut(s) 502
HinfI GANTC 9 cut(s) 76, 339, 381, 803, 845, 1024, 1043, 1184, 1213
HpaII CCGG 9 cut(s) 228, 295, 621, 648, 665, 748, 786, 790, 1131
HphI GGTGA 5 cut(s) 734, 787, 823, 1006, 1150
Hpy166II GTNNAC 4 cut(s) 55, 301, 502, 1072
Hpy188I TCNGA 2 cut(s) 271, 1218
Hpy188III TCNNGA 2 cut(s) 837, 1040
Hpy8I GTNNAC 4 cut(s) 55, 301, 502, 1072
Hpy99I CGWCG 2 cut(s) 400, 1032
HpyAV CCTTC 9 cut(s) 39, 497, 508, 645, 885, 967, 1102, 1153, 1168
HpyCH4III ACNGT 2 cut(s) 97, 915
HpyCH4IV ACGT 1 cut(s) 101
HpyCH4V TGCA 2 cut(s) 952, 1150
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 856, 958, 1082
HpyF3I CTNAG 2 cut(s) 127, 894
HpySE526I ACGT 1 cut(s) 101
Hsp92I GRCGYC 2 cut(s) 483, 1030
Hsp92II CATG 4 cut(s) 463, 868, 961, 1154
HspAI GCGC 1 cut(s) 48
KpnI GGTACC 1 cut(s) 96
Kzo9I GATC 4 cut(s) 552, 643, 734, 988
LmnI GCTCC 4 cut(s) 533, 574, 595, 1177
Lsp1109I GCAGC 1 cut(s) 622
LweI GCATC 4 cut(s) 577, 1041, 1072, 1225
MaeI CTAG 4 cut(s) 368, 374, 506, 548
MaeII ACGT 1 cut(s) 101
MaeIII GTNAC 5 cut(s) 97, 130, 595, 775, 1222
MalI GATC 4 cut(s) 554, 645, 736, 990
MbiI CCGCTC 1 cut(s) 853
MboI GATC 4 cut(s) 552, 643, 734, 988
MboII GAAGA 9 cut(s) 491, 548, 675, 739, 742, 826, 835, 1106, 1210
MhlI GDGCHC 2 cut(s) 126, 1060
MluCI AATT 3 cut(s) 8, 41, 201
MlyI GAGTC 5 cut(s) 375, 854, 1052, 1193, 1207
MmeI TCCRAC 1 cut(s) 255
MseI TTAA 3 cut(s) 204, 906, 1203
MslI CAYNNNNRTG 1 cut(s) 464
MspI CCGG 9 cut(s) 228, 295, 621, 648, 665, 748, 786, 790, 1131
MspR9I CCNGG 9 cut(s) 112, 254, 295, 296, 473, 622, 648, 720, 1132
MvaI CCWGG 4 cut(s) 112, 254, 473, 720
MvnI CGCG 3 cut(s) 48, 50, 1076
MwoI GCNNNNNNNGC 4 cut(s) 25, 856, 958, 1082
NciI CCSGG 5 cut(s) 295, 296, 622, 648, 1132
NdeII GATC 4 cut(s) 552, 643, 734, 988
NlaIII CATG 4 cut(s) 463, 868, 961, 1154
NlaIV GGNNCC 8 cut(s) 94, 221, 251, 576, 663, 746, 752, 840
NmuCI GTSAC 3 cut(s) 97, 595, 775
NspI RCATGY 2 cut(s) 463, 868
PaqCI CACCTGC 1 cut(s) 1126
PceI AGGCCT 1 cut(s) 257
PciI ACATGT 1 cut(s) 459
PfeI GAWTC 4 cut(s) 76, 339, 803, 1024
PflMI CCANNNNNTGG 1 cut(s) 454
PfoI TCCNGGA 1 cut(s) 646
PinAI ACCGGT 2 cut(s) 227, 664
PkrI GCNGC 4 cut(s) 109, 612, 852, 1240
Ple19I CGATCG 1 cut(s) 991
PleI GAGTC 5 cut(s) 375, 853, 1051, 1192, 1207
PpsI GAGTC 5 cut(s) 375, 853, 1051, 1192, 1207
PscI ACATGT 1 cut(s) 459
PshAI GACNNNNGTC 2 cut(s) 602, 844
Psp6I CCWGG 4 cut(s) 110, 252, 471, 718
PspEI GGTNACC 2 cut(s) 775, 1222
PspGI CCWGG 4 cut(s) 110, 252, 471, 718
PspN4I GGNNCC 8 cut(s) 94, 221, 251, 576, 663, 746, 752, 840
PspPI GGNCC 3 cut(s) 250, 839, 999
PsrI GAACNNNNNNTAC 2 cut(s) 45, 77
PstNI CAGNNNCTG 1 cut(s) 584
PvuI CGATCG 1 cut(s) 991
RsaI GTAC 7 cut(s) 54, 68, 94, 232, 350, 926, 1073
RsaNI GTAC 7 cut(s) 53, 67, 93, 231, 349, 925, 1072
RseI CAYNNNNRTG 1 cut(s) 464
SalI GTCGAC 1 cut(s) 500
SaqAI TTAA 3 cut(s) 204, 906, 1203
SatI GCNGC 4 cut(s) 108, 611, 851, 1239
Sau3AI GATC 4 cut(s) 552, 643, 734, 988
Sau96I GGNCC 3 cut(s) 250, 839, 999
SchI GAGTC 5 cut(s) 375, 854, 1052, 1193, 1207
ScrFI CCNGG 9 cut(s) 112, 254, 295, 296, 473, 622, 648, 720, 1132
SduI GDGCHC 2 cut(s) 126, 1060
SfaNI GCATC 4 cut(s) 577, 1041, 1072, 1225
SinI GGWCC 2 cut(s) 250, 839
SmaI CCCGGG 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 464
SmlI CTYRAG 1 cut(s) 70
SmoI CTYRAG 1 cut(s) 70
Sse9I AATT 3 cut(s) 8, 41, 201
SseBI AGGCCT 1 cut(s) 257
SsiI CCGC 7 cut(s) 50, 108, 193, 851, 1016, 1054, 1238
SspMI CTAG 4 cut(s) 368, 374, 506, 548
StuI AGGCCT 1 cut(s) 257
StyD4I CCNGG 9 cut(s) 110, 252, 293, 294, 471, 620, 646, 718, 1130
TaaI ACNGT 2 cut(s) 97, 915
TaiI ACGT 1 cut(s) 104
TaqI TCGA 5 cut(s) 398, 501, 606, 987, 1027
TaqII GACCGA 1 cut(s) 678
TasI AATT 3 cut(s) 8, 41, 201
TatI WGTACW 1 cut(s) 66
TauI GCSGC 3 cut(s) 110, 853, 1241
TfiI GAWTC 4 cut(s) 76, 339, 803, 1024
Tru1I TTAA 3 cut(s) 204, 906, 1203
Tru9I TTAA 3 cut(s) 204, 906, 1203
TscAI CASTG 1 cut(s) 562
TseFI GTSAC 3 cut(s) 97, 595, 775
TseI GCWGC 1 cut(s) 610
Tsp45I GTSAC 3 cut(s) 97, 595, 775
TspDTI ATGAA 5 cut(s) 54, 252, 331, 720, 954
TspGWI ACGGA 2 cut(s) 520, 796
TspMI CCCGGG 1 cut(s) 294
TspRI CASTG 1 cut(s) 562
Van91I CCANNNNNTGG 1 cut(s) 454
VpaK11BI GGWCC 2 cut(s) 250, 839
XagI CCTNNNNNAGG 1 cut(s) 1109
XapI RAATTY 1 cut(s) 41
XceI RCATGY 2 cut(s) 463, 868
XmaI CCCGGG 1 cut(s) 294
XmiI GTMKAC 2 cut(s) 300, 501
XspI CTAG 4 cut(s) 368, 374, 506, 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.