Rmu_sc0013931.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013931.1
OG0000087
Physical Location & Seq
Reverse (-)
8075 .. 9243
1169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013931.1_g000004.1.cds

Sequence Viewer

Length: 1041 bp
atggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtctattgaagagacccttttggagataaccgatgagggatatggtgaacctgatcccgacgcccctgtggcccacgccgtgcacccctccatggccaatgtcattacgatagatgacaccggaatgggaaaagtaccggccttagtgcctatttcctcttgttccactgggagcgatgaggcgttactccccggtgagaagaagagatcccacaagcaccggcatcgaactgataaggaggtgacatacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgggatcagggccatcgccttctcttggcctgttatctccggccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaatacggggttgccgatgaaaagtttgtgcggtccatgcttagggatctgaaggatattgacctcgaccgggcactcttcaatgtgtgcgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctcttcgggcaggtgaattatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggagcctgagggtgaggttgctgaggcgcgggtggaggtaaagaacgcccgggactccgagaagaaggctgcagagtcagccgtctcatggaaggagaaggcagactctctggaggatccccttcccgaggagaggcacggggccgtggaggagtacaagtcctcggatgagcttatctcgatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaggccaaattcaggctgggtctcctagagaaaaggaagaaggagagggaggaggcgggcaagtccggtgccggtgggtcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

346

Amino Acids

37.85

Weight (kDa)

5.27

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 604
AatII GACGTC 1 cut(s) 48
Acc36I ACCTGC 1 cut(s) 604
AccB1I GGYRCC 1 cut(s) 1025
AccBSI CCGCTC 1 cut(s) 658
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 733
AciI CCGC 8 cut(s) 493, 658, 684, 697, 704, 733, 941, 1013
AclWI GGATC 6 cut(s) 122, 276, 388, 516, 815, 828
AcoI YGGCCR 5 cut(s) 168, 328, 417, 681, 942
AcsI RAATTY 1 cut(s) 965
AcuI CTGAAG 2 cut(s) 533, 605
AcyI GRCGYC 3 cut(s) 45, 135, 561
AdeI CACNNNGTG 1 cut(s) 154
AfaI GTAC 4 cut(s) 210, 346, 860, 950
AgsI TTSAA 2 cut(s) 83, 544
AhdI GACNNNNNGTC 1 cut(s) 55
AjnI CCWGG 2 cut(s) 18, 339
AluBI AGCT 3 cut(s) 454, 646, 877
AluI AGCT 3 cut(s) 454, 646, 877
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 3 cut(s) 80, 793, 983
Alw44I GTGCAC 1 cut(s) 155
AlwI GGATC 6 cut(s) 122, 276, 388, 516, 815, 828
AlwNI CAGNNNCTG 1 cut(s) 457
Ama87I CYCGRG 3 cut(s) 376, 753, 830
ApaLI GTGCAC 1 cut(s) 155
ApeKI GCWGC 6 cut(s) 451, 454, 694, 773, 893, 896
ApoI RAATTY 1 cut(s) 965
AspA2I CCTAGG 1 cut(s) 52
AspLEI GCGC 2 cut(s) 554, 733
AspS9I GGNCC 4 cut(s) 145, 386, 495, 846
AsuC2I CCSGG 8 cut(s) 267, 332, 377, 378, 533, 754, 755, 946
AsuHPI GGTGA 6 cut(s) 131, 281, 328, 365, 628, 728
AvaI CYCGRG 3 cut(s) 376, 753, 830
AvaII GGWCC 1 cut(s) 495
AvrII CCTAGG 1 cut(s) 52
AxyI CCTNAGG 1 cut(s) 711
BaeGI GKGCMC 2 cut(s) 159, 538
BalI TGGCCA 1 cut(s) 170
BamHI GGATCC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 1025
BauI CACGAG 1 cut(s) 67
Bbv12I GWGCWC 1 cut(s) 159
BbvCI CCTCAGC 1 cut(s) 726
BbvI GCAGC 6 cut(s) 441, 463, 706, 760, 880, 883
BccI CCATC 4 cut(s) 397, 452, 563, 673
BceAI ACGGC 4 cut(s) 137, 404, 770, 833
BcgI CGANNNNNNTGC 4 cut(s) 281, 315, 589, 623
BciT130I CCWGG 2 cut(s) 20, 341
BcnI CCSGG 8 cut(s) 267, 332, 377, 378, 533, 754, 755, 946
BcoDI GTCTC 3 cut(s) 80, 793, 983
BfaI CTAG 2 cut(s) 53, 983
BfmI CTRYAG 1 cut(s) 774
BfuAI ACCTGC 1 cut(s) 604
BglI GCCNNNNNGGC 1 cut(s) 143
BisI GCNGC 8 cut(s) 452, 455, 684, 695, 774, 894, 897, 942
BlnI CCTAGG 1 cut(s) 52
BlsI GCNGC 8 cut(s) 453, 456, 685, 696, 775, 895, 898, 943
Bme18I GGWCC 1 cut(s) 495
BmeRI GACNNNNNGTC 1 cut(s) 55
BmeT110I CYCGRG 3 cut(s) 376, 753, 830
BmgT120I GGNCC 4 cut(s) 145, 386, 495, 846
BmiI GGNNCC 4 cut(s) 708, 822, 847, 1027
BmrI ACTGGG 1 cut(s) 252
BmsI GCATC 3 cut(s) 19, 307, 876
BmuI ACTGGG 1 cut(s) 252
BplI GAGNNNNNCTC 4 cut(s) 647, 679, 866, 898
BpmI CTGGAG 2 cut(s) 668, 836
Bpu10I CCTNAGC 2 cut(s) 503, 726
BpuMI CCSGG 8 cut(s) 267, 332, 377, 378, 533, 754, 755, 946
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 3 cut(s) 45, 135, 561
BsaI GGTCTC 2 cut(s) 80, 983
BsaWI WCCGGW 3 cut(s) 194, 424, 1022
BsaXI ACNNNNNCTCC 2 cut(s) 848, 878
Bse118I RCCGGY 3 cut(s) 211, 294, 1028
Bse1I ACTGG 3 cut(s) 247, 331, 352
Bse21I CCTNAGG 1 cut(s) 711
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 2 cut(s) 20, 341
BseGI GGATG 2 cut(s) 340, 877
BseJI GATNNNNATC 1 cut(s) 579
BseMII CTCAG 3 cut(s) 666, 702, 717
BseNI ACTGG 3 cut(s) 247, 331, 352
BseRI GAGGAG 4 cut(s) 605, 848, 869, 1022
BseSI GKGCMC 2 cut(s) 159, 538
BseX3I CGGCCG 2 cut(s) 417, 942
BseXI GCAGC 6 cut(s) 441, 463, 706, 760, 880, 883
BseYI CCCAGC 1 cut(s) 973
BsgI GTGCAG 1 cut(s) 20
Bsh1236I CGCG 1 cut(s) 733
Bsh1285I CGRYCG 3 cut(s) 420, 532, 945
BshNI GGYRCC 1 cut(s) 1025
BsiEI CGRYCG 3 cut(s) 420, 532, 945
BsiHKAI GWGCWC 1 cut(s) 159
BsiHKCI CYCGRG 3 cut(s) 376, 753, 830
BslFI GGGAC 2 cut(s) 674, 770
BsmAI GTCTC 3 cut(s) 80, 793, 983
BsmBI CGTCTC 1 cut(s) 793
BsmFI GGGAC 2 cut(s) 674, 770
Bso31I GGTCTC 2 cut(s) 80, 983
BsoBI CYCGRG 3 cut(s) 376, 753, 830
Bsp1286I GDGCHC 2 cut(s) 159, 538
Bsp143I GATC 6 cut(s) 127, 281, 370, 380, 508, 820
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 8 cut(s) 493, 658, 684, 697, 704, 733, 941, 1013
BspCNI CTCAG 3 cut(s) 667, 703, 718
BspFNI CGCG 1 cut(s) 733
BspHI TCATGA 1 cut(s) 918
BspLI GGNNCC 4 cut(s) 708, 822, 847, 1027
BspMAI CTGCAG 1 cut(s) 778
BspMI ACCTGC 1 cut(s) 604
BspPI GGATC 6 cut(s) 122, 276, 388, 516, 815, 828
BspT107I GGYRCC 1 cut(s) 1025
BspTNI GGTCTC 2 cut(s) 80, 983
BsrBI CCGCTC 1 cut(s) 658
BsrFI RCCGGY 3 cut(s) 211, 294, 1028
BsrI ACTGG 3 cut(s) 247, 331, 352
BssAI RCCGGY 3 cut(s) 211, 294, 1028
BssMI GATC 6 cut(s) 127, 281, 370, 380, 508, 820
BssNI GRCGYC 3 cut(s) 45, 135, 561
BssSI CACGAG 1 cut(s) 67
BssT1I CCWWGG 2 cut(s) 52, 165
Bst2BI CACGAG 1 cut(s) 67
Bst2UI CCWGG 2 cut(s) 20, 341
Bst6I CTCTTC 5 cut(s) 78, 272, 350, 545, 611
BstACI GRCGYC 3 cut(s) 45, 135, 561
BstC8I GCNNGC 3 cut(s) 565, 891, 1015
BstDEI CTNAG 8 cut(s) 217, 503, 675, 690, 711, 726, 952, 1038
BstDSI CCRYGG 2 cut(s) 165, 849
BstENI CCTNNNNNAGG 1 cut(s) 830
BstF5I GGATG 2 cut(s) 340, 877
BstFNI CGCG 1 cut(s) 733
BstHHI GCGC 2 cut(s) 554, 733
BstKTI GATC 6 cut(s) 130, 284, 373, 383, 511, 823
BstMAI GTCTC 3 cut(s) 80, 793, 983
BstMBI GATC 6 cut(s) 127, 281, 370, 380, 508, 820
BstMCI CGRYCG 3 cut(s) 420, 532, 945
BstMWI GCNNNNNNNGC 6 cut(s) 143, 448, 499, 560, 680, 782
BstNI CCWGG 2 cut(s) 20, 341
BstNSI RCATGY 1 cut(s) 10
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 2 cut(s) 159, 538
BstUI CGCG 1 cut(s) 733
BstV1I GCAGC 6 cut(s) 441, 463, 706, 760, 880, 883
BstX2I RGATCY 3 cut(s) 281, 508, 820
BstXI CCANNNNNNTGG 1 cut(s) 347
BstYI RGATCY 3 cut(s) 281, 508, 820
BstZI CGGCCG 2 cut(s) 417, 942
Bsu36I CCTNAGG 1 cut(s) 711
BtgI CCRYGG 2 cut(s) 165, 849
BtgZI GCGATG 2 cut(s) 264, 375
BtsCI GGATG 2 cut(s) 340, 877
BtsIMutI CAGTG 2 cut(s) 240, 324
BveI ACCTGC 1 cut(s) 604
Cac8I GCNNGC 3 cut(s) 565, 891, 1015
CaiI CAGNNNCTG 1 cut(s) 457
CciI TCATGA 1 cut(s) 918
CfoI GCGC 2 cut(s) 554, 733
Cfr10I RCCGGY 3 cut(s) 211, 294, 1028
Cfr13I GGNCC 4 cut(s) 145, 386, 495, 846
Cfr9I CCCGGG 2 cut(s) 376, 753
CseI GACGC 2 cut(s) 143, 569
Csp6I GTAC 4 cut(s) 209, 345, 859, 949
CviAII CATG 6 cut(s) 7, 166, 499, 629, 792, 919
CviQI GTAC 4 cut(s) 209, 345, 859, 949
DdeI CTNAG 8 cut(s) 217, 503, 675, 690, 711, 726, 952, 1038
DpnI GATC 6 cut(s) 129, 283, 372, 382, 510, 822
DpnII GATC 6 cut(s) 127, 281, 370, 380, 508, 820
DraIII CACNNNGTG 1 cut(s) 154
DriI GACNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 5 cut(s) 168, 328, 417, 681, 942
EagI CGGCCG 2 cut(s) 417, 942
Eam1104I CTCTTC 5 cut(s) 78, 272, 350, 545, 611
Eam1105I GACNNNNNGTC 1 cut(s) 55
EarI CTCTTC 5 cut(s) 78, 272, 350, 545, 611
EclXI CGGCCG 2 cut(s) 417, 942
Eco130I CCWWGG 2 cut(s) 52, 165
Eco31I GGTCTC 2 cut(s) 80, 983
Eco47I GGWCC 1 cut(s) 495
Eco52I CGGCCG 2 cut(s) 417, 942
Eco57I CTGAAG 2 cut(s) 533, 605
Eco81I CCTNAGG 1 cut(s) 711
Eco88I CYCGRG 3 cut(s) 376, 753, 830
EcoNI CCTNNNNNAGG 1 cut(s) 830
EcoRII CCWGG 2 cut(s) 18, 339
EcoT14I CCWWGG 2 cut(s) 52, 165
ErhI CCWWGG 2 cut(s) 52, 165
Esp3I CGTCTC 1 cut(s) 793
FaeI CATG 6 cut(s) 10, 169, 502, 632, 795, 922
FaiI YATR 8 cut(s) 8, 117, 167, 322, 500, 630, 793, 920
FalI AAGNNNNNCTT 2 cut(s) 75, 107
FaqI GGGAC 2 cut(s) 674, 770
FatI CATG 6 cut(s) 6, 165, 498, 628, 791, 918
FauI CCCGC 3 cut(s) 651, 726, 1006
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 8 cut(s) 452, 455, 684, 695, 774, 894, 897, 942
FokI GGATG 2 cut(s) 347, 884
Fsp4HI GCNGC 8 cut(s) 452, 455, 684, 695, 774, 894, 897, 942
FspBI CTAG 2 cut(s) 53, 983
GlaI GCGC 2 cut(s) 553, 732
GluI GCNGC 8 cut(s) 452, 455, 684, 695, 774, 894, 897, 942
GsaI CCCAGC 1 cut(s) 977
GsuI CTGGAG 2 cut(s) 668, 836
HgaI GACGC 2 cut(s) 143, 569
HhaI GCGC 2 cut(s) 554, 733
Hin1I GRCGYC 3 cut(s) 45, 135, 561
Hin1II CATG 6 cut(s) 10, 169, 502, 632, 795, 922
Hin6I GCGC 2 cut(s) 552, 731
HinP1I GCGC 2 cut(s) 552, 731
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HinfI GANTC 5 cut(s) 70, 662, 758, 779, 809
HphI GGTGA 6 cut(s) 131, 281, 328, 365, 628, 728
Hpy166II GTNNAC 3 cut(s) 49, 122, 157
Hpy188I TCNGA 4 cut(s) 513, 585, 763, 871
Hpy188III TCNNGA 5 cut(s) 131, 815, 830, 883, 919
Hpy8I GTNNAC 3 cut(s) 49, 122, 157
Hpy99I CGWCG 4 cut(s) 47, 50, 137, 563
HpyCH4IV ACGT 1 cut(s) 45
HpyCH4V TGCA 3 cut(s) 37, 157, 776
HpyF10VI GCNNNNNNNGC 6 cut(s) 143, 448, 499, 560, 680, 782
HpyF3I CTNAG 8 cut(s) 217, 503, 675, 690, 711, 726, 952, 1038
HpySE526I ACGT 1 cut(s) 45
Hsp92I GRCGYC 3 cut(s) 45, 135, 561
Hsp92II CATG 6 cut(s) 10, 169, 502, 632, 795, 922
HspAI GCGC 2 cut(s) 552, 731
Kzo9I GATC 6 cut(s) 127, 281, 370, 380, 508, 820
LmnI GCTCC 3 cut(s) 246, 655, 706
Lsp1109I GCAGC 6 cut(s) 441, 463, 706, 760, 880, 883
LweI GCATC 3 cut(s) 19, 307, 876
MaeI CTAG 2 cut(s) 53, 983
MaeII ACGT 1 cut(s) 45
MaeIII GTNAC 2 cut(s) 258, 316
MalI GATC 6 cut(s) 129, 283, 372, 382, 510, 822
MbiI CCGCTC 1 cut(s) 658
MboI GATC 6 cut(s) 127, 281, 370, 380, 508, 820
MflI RGATCY 3 cut(s) 281, 508, 820
MhlI GDGCHC 2 cut(s) 159, 538
MlsI TGGCCA 1 cut(s) 170
MluCI AATT 2 cut(s) 619, 965
MluNI TGGCCA 1 cut(s) 170
MlyI GAGTC 5 cut(s) 79, 656, 752, 788, 803
Mox20I TGGCCA 1 cut(s) 170
MscI TGGCCA 1 cut(s) 170
MseI TTAA 1 cut(s) 927
MslI CAYNNNNRTG 2 cut(s) 11, 197
Msp20I TGGCCA 1 cut(s) 170
MspA1I CMGCKG 2 cut(s) 454, 697
MvaI CCWGG 2 cut(s) 20, 341
MvnI CGCG 1 cut(s) 733
MwoI GCNNNNNNNGC 6 cut(s) 143, 448, 499, 560, 680, 782
NciI CCSGG 8 cut(s) 267, 332, 377, 378, 533, 754, 755, 946
NcoI CCATGG 1 cut(s) 165
NdeII GATC 6 cut(s) 127, 281, 370, 380, 508, 820
NlaIII CATG 6 cut(s) 10, 169, 502, 632, 795, 922
NlaIV GGNNCC 4 cut(s) 708, 822, 847, 1027
NmuCI GTSAC 1 cut(s) 316
NspI RCATGY 1 cut(s) 10
PagI TCATGA 1 cut(s) 918
PaqCI CACCTGC 1 cut(s) 604
PcsI WCGNNNNNNNCGW 3 cut(s) 65, 474, 564
PkrI GCNGC 8 cut(s) 453, 456, 685, 696, 775, 895, 898, 943
PleI GAGTC 5 cut(s) 78, 656, 752, 787, 803
PpsI GAGTC 5 cut(s) 78, 656, 752, 787, 803
Psp6I CCWGG 2 cut(s) 18, 339
PspFI CCCAGC 1 cut(s) 973
PspGI CCWGG 2 cut(s) 18, 339
PspN4I GGNNCC 4 cut(s) 708, 822, 847, 1027
PspPI GGNCC 4 cut(s) 145, 386, 495, 846
PstI CTGCAG 1 cut(s) 778
PstNI CAGNNNCTG 1 cut(s) 457
PsuI RGATCY 3 cut(s) 281, 508, 820
PvuII CAGCTG 1 cut(s) 454
RsaI GTAC 4 cut(s) 210, 346, 860, 950
RsaNI GTAC 4 cut(s) 209, 345, 859, 949
RseI CAYNNNNRTG 2 cut(s) 11, 197
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 1 cut(s) 927
SatI GCNGC 8 cut(s) 452, 455, 684, 695, 774, 894, 897, 942
Sau3AI GATC 6 cut(s) 127, 281, 370, 380, 508, 820
Sau96I GGNCC 4 cut(s) 145, 386, 495, 846
SchI GAGTC 5 cut(s) 79, 656, 752, 788, 803
SduI GDGCHC 2 cut(s) 159, 538
SfaNI GCATC 3 cut(s) 19, 307, 876
SfcI CTRYAG 1 cut(s) 774
SinI GGWCC 1 cut(s) 495
SmaI CCCGGG 2 cut(s) 378, 755
SmiMI CAYNNNNRTG 2 cut(s) 11, 197
Sse9I AATT 2 cut(s) 619, 965
SsiI CCGC 8 cut(s) 493, 658, 684, 697, 704, 733, 941, 1013
SspMI CTAG 2 cut(s) 53, 983
StyI CCWWGG 2 cut(s) 52, 165
TaiI ACGT 1 cut(s) 48
TaqI TCGA 7 cut(s) 42, 48, 59, 301, 528, 558, 884
TaqII GACCGA 1 cut(s) 63
TasI AATT 2 cut(s) 619, 965
TatI WGTACW 1 cut(s) 858
TauI GCSGC 2 cut(s) 686, 944
Tru1I TTAA 1 cut(s) 927
Tru9I TTAA 1 cut(s) 927
TscAI CASTG 2 cut(s) 247, 331
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 6 cut(s) 451, 454, 694, 773, 893, 896
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 4 cut(s) 477, 495, 617, 935
TspMI CCCGGG 2 cut(s) 376, 753
TspRI CASTG 2 cut(s) 247, 331
VneI GTGCAC 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 495
XagI CCTNNNNNAGG 1 cut(s) 830
XapI RAATTY 1 cut(s) 965
XceI RCATGY 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 970
XmaI CCCGGG 2 cut(s) 376, 753
XmaJI CCTAGG 1 cut(s) 52
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 2 cut(s) 53, 983
ZraI GACGTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.