Rmu_sc0011559.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011559.1
OG0000087
Physical Location & Seq
Forward (+)
16902 .. 19254
2353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011559.1_g000005.1.cds

Sequence Viewer

Length: 1611 bp
atggaattagaaaccaaggctggggacgtgggatcgtcctatcaatcatctgtgagaaaagtagaagcagatattgaccggtacctggtaggcagtagtgctcatatgaggttggcagagaacaccggatcttcgactggggtgttctcggagagtagtgagagtaccgatgtagatgacagcaaggatgattttggggcggaggtgcaaggagactatgtgcgactagcctgggagaagtataacaatgaaggagatcaatacgatgaggatgaaatggggaatatcggacgtggtagaactcaggcctctaaagtctggagagatggcagcaaaaccacctccgggatgggtggcgctgcacgagaaccagttccactaagggctgtcattaccactaccccggtgcctacaatatctgttgaggatgctaaacctgtcaccggggcagttgactctgaatgcctggcgacaaattttgagaaacagtcttgtcaaggtacggtgacgttcgccgctcgggactatgagcctctagttacgaacatgccaaccactcaaagcaagaagtggaggaacaaggtatttcttgctggagggcaatggcagattagaaataagaaatggcaattaacggtgaaagtgccgaagaggaaacccagtaaaggtaaggaggatgacaagatgaatgaaaacaagttgatggacatcctcatgagccaaggagaggatgccctttacattgacgttgacctgagcgagcagcctattgtcggggacgtaattaccattgctgatcccgggagaggaaaggcccctgtgtctggctctttctcttcccgttccactgggtcagctggtagtgaggaggccttgcttctaggtgagaagaagaggttccatcggcacagacatcggagcagggacaaggaaaaggttacctacaccggccgagacgtgaaagggacgggacccaagaggcagaagaaaagtcaccctctgggactggagccgtcattgtcccttgggttgttgtctctggccatgccactagtccccaagaagcccatcaagcaactgttggacgagtacagggttgctgatgagaagttcatgtgctctatgctcgccgatctaaaggacgtagacctcgaccgggaagatacgcaactgaatgaggaggttagtaacctctccgggcaagtgaagtatcttcacggagagaaggcaaggctggagaaggagcgggagtcgttgaatagaaaggtggatgtccgggacttcgtgaaagaggctgaagaatctgcaaagtcatggaaggccaaaatagagcatcttgaggagcgccttcccattgaaagtcaagaggctgttgccgggttcaaggactcccaagagcttatcgatatgctactcgccgctcaggacaaagccgtgatcataaagtacaaagagtgggtggcagccgagtacttggatgaagccaaattcaggcagagactgcttgagaaaaagaagaaggaacaagaggccaaggagagagaactgggaagcaagagtgctaaacccgagggagaggcaactagtagtcatcctgatgttcataattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

536

Amino Acids

59.81

Weight (kDa)

5.92

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 81
AccB1I GGYRCC 2 cut(s) 81, 406
AccBSI CCGCTC 3 cut(s) 518, 1246, 1421
AccI GTMKAC 1 cut(s) 1146
AciI CCGC 4 cut(s) 200, 516, 1246, 1419
AclWI GGATC 3 cut(s) 40, 136, 791
AcoI YGGCCR 2 cut(s) 949, 1041
AcsI RAATTY 2 cut(s) 475, 1487
AcuI CTGAAG 1 cut(s) 1317
AfaI GTAC 6 cut(s) 83, 166, 502, 1091, 1448, 1472
AgeI ACCGGT 1 cut(s) 78
AgsI TTSAA 3 cut(s) 1258, 1358, 1384
AhlI ACTAGT 2 cut(s) 1051, 1583
AjiI CACGTC 3 cut(s) 28, 293, 958
AjnI CCWGG 3 cut(s) 84, 230, 465
AluBI AGCT 2 cut(s) 857, 1399
AluI AGCT 2 cut(s) 857, 1399
Alw21I GWGCWC 2 cut(s) 103, 1121
Alw26I GTCTC 4 cut(s) 207, 948, 1041, 1492
AlwI GGATC 3 cut(s) 40, 136, 791
AlwNI CAGNNNCTG 1 cut(s) 1501
Ama87I CYCGRG 3 cut(s) 519, 800, 1568
AoxI GGCC 7 cut(s) 306, 813, 870, 949, 1041, 1320, 1530
ApeKI GCWGC 4 cut(s) 330, 359, 763, 1463
ApoI RAATTY 2 cut(s) 475, 1487
AsiGI ACCGGT 1 cut(s) 78
Asp700I GAANNNNTTC 2 cut(s) 372, 896
Asp718I GGTACC 1 cut(s) 81
AspLEI GCGC 2 cut(s) 359, 1347
AspS9I GGNCC 2 cut(s) 814, 971
AsuC2I CCSGG 9 cut(s) 346, 404, 445, 801, 802, 1157, 1198, 1277, 1378
AsuHPI GGTGA 5 cut(s) 433, 517, 649, 896, 986
AvaI CYCGRG 3 cut(s) 519, 800, 1568
AvaII GGWCC 1 cut(s) 971
BalI TGGCCA 1 cut(s) 1043
BanI GGYRCC 2 cut(s) 81, 406
BauI CACGAG 1 cut(s) 363
Bbv12I GWGCWC 2 cut(s) 103, 1121
BbvI GCAGC 4 cut(s) 342, 346, 775, 1475
BccI CCATC 5 cut(s) 320, 343, 697, 909, 1076
BceAI ACGGC 2 cut(s) 997, 1418
BcgI CGANNNNNNTGC 2 cut(s) 896, 930
BciT130I CCWGG 3 cut(s) 86, 232, 467
BclI TGATCA 1 cut(s) 1437
BcnI CCSGG 9 cut(s) 346, 404, 445, 801, 802, 1157, 1198, 1277, 1378
BcoDI GTCTC 4 cut(s) 207, 948, 1041, 1492
BcuI ACTAGT 2 cut(s) 1051, 1583
BfaI CTAG 5 cut(s) 227, 536, 881, 1052, 1584
BfoI RGCGCY 2 cut(s) 360, 1348
BisI GCNGC 6 cut(s) 331, 360, 516, 764, 1419, 1464
BlsI GCNGC 6 cut(s) 332, 361, 517, 765, 1420, 1465
BmcAI AGTACT 1 cut(s) 1472
Bme18I GGWCC 1 cut(s) 971
BmeT110I CYCGRG 3 cut(s) 519, 800, 1568
BmgBI CACGTC 3 cut(s) 28, 293, 958
BmgT120I GGNCC 2 cut(s) 814, 971
BmiI GGNNCC 7 cut(s) 83, 408, 816, 899, 972, 973, 1011
BmrI ACTGGG 4 cut(s) 147, 654, 858, 1556
BmsI GCATC 3 cut(s) 418, 721, 1342
BmuI ACTGGG 4 cut(s) 147, 654, 858, 1556
BpmI CTGGAG 4 cut(s) 340, 615, 1028, 1256
Bpu10I CCTNAGC 2 cut(s) 755, 1422
BpuEI CTTGAG 2 cut(s) 1358, 1526
BpuMI CCSGG 9 cut(s) 346, 404, 445, 801, 802, 1157, 1198, 1277, 1378
Bsa29I ATCGAT 1 cut(s) 1404
BsaBI GATNNNNATC 1 cut(s) 707
BsaJI CCNNGG 9 cut(s) 15, 231, 402, 444, 721, 800, 1024, 1533, 1569
BsaWI WCCGGW 2 cut(s) 78, 125
BsaXI ACNNNNNCTCC 4 cut(s) 204, 234, 1235, 1265
Bse118I RCCGGY 2 cut(s) 78, 947
Bse1I ACTGG 6 cut(s) 142, 371, 660, 853, 1011, 1551
Bse3DI GCAATG 2 cut(s) 608, 789
Bse8I GATNNNNATC 1 cut(s) 707
BseBI CCWGG 3 cut(s) 86, 232, 467
BseCI ATCGAT 1 cut(s) 1404
BseDI CCNNGG 9 cut(s) 15, 231, 402, 444, 721, 800, 1024, 1533, 1569
BseJI GATNNNNATC 1 cut(s) 707
BseMI GCAATG 2 cut(s) 608, 789
BseMII CTCAG 3 cut(s) 317, 746, 1436
BseNI ACTGG 6 cut(s) 142, 371, 660, 853, 1011, 1551
BseRI GAGGAG 3 cut(s) 881, 1193, 1355
BseX3I CGGCCG 1 cut(s) 949
BseXI GCAGC 4 cut(s) 342, 346, 775, 1475
BseYI CCCAGC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 345
Bsh1285I CGRYCG 2 cut(s) 952, 1156
BshFI GGCC 7 cut(s) 308, 815, 872, 951, 1043, 1322, 1532
BshNI GGYRCC 2 cut(s) 81, 406
BshTI ACCGGT 1 cut(s) 78
BshVI ATCGAT 1 cut(s) 1404
BsiEI CGRYCG 2 cut(s) 952, 1156
BsiHKAI GWGCWC 2 cut(s) 103, 1121
BsiHKCI CYCGRG 3 cut(s) 519, 800, 1568
BsmAI GTCTC 4 cut(s) 207, 948, 1041, 1492
BsmBI CGTCTC 1 cut(s) 948
BsmI GAATGC 1 cut(s) 467
BsnI GGCC 7 cut(s) 308, 815, 872, 951, 1043, 1322, 1532
BsoBI CYCGRG 3 cut(s) 519, 800, 1568
Bsp1286I GDGCHC 2 cut(s) 103, 1121
Bsp143I GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
BspACI CCGC 4 cut(s) 200, 516, 1246, 1419
BspANI GGCC 7 cut(s) 308, 815, 872, 951, 1043, 1322, 1532
BspCNI CTCAG 3 cut(s) 316, 747, 1435
BspDI ATCGAT 1 cut(s) 1404
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 7 cut(s) 83, 408, 816, 899, 972, 973, 1011
BspPI GGATC 3 cut(s) 40, 136, 791
BspT107I GGYRCC 2 cut(s) 81, 406
BsrBI CCGCTC 3 cut(s) 518, 1246, 1421
BsrDI GCAATG 2 cut(s) 608, 789
BsrFI RCCGGY 2 cut(s) 78, 947
BsrI ACTGG 6 cut(s) 142, 371, 660, 853, 1011, 1551
BssAI RCCGGY 2 cut(s) 78, 947
BssECI CCNNGG 9 cut(s) 15, 231, 402, 444, 721, 800, 1024, 1533, 1569
BssMI GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
BssSI CACGAG 1 cut(s) 363
BssT1I CCWWGG 4 cut(s) 15, 721, 1024, 1533
Bst2BI CACGAG 1 cut(s) 363
Bst2UI CCWGG 3 cut(s) 86, 232, 467
Bst4CI ACNGT 4 cut(s) 489, 505, 637, 1080
Bst6I CTCTTC 3 cut(s) 644, 841, 887
BstAPI GCANNNNNTGC 1 cut(s) 1501
BstC8I GCNNGC 2 cut(s) 761, 1128
BstDEI CTNAG 4 cut(s) 303, 380, 755, 1422
BstEII GGTNACC 1 cut(s) 937
BstH2I RGCGCY 2 cut(s) 360, 1348
BstHHI GCGC 2 cut(s) 359, 1347
BstKTI GATC 6 cut(s) 35, 131, 259, 799, 1135, 1440
BstMAI GTCTC 4 cut(s) 207, 948, 1041, 1492
BstMBI GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
BstMCI CGRYCG 2 cut(s) 952, 1156
BstMWI GCNNNNNNNGC 2 cut(s) 1072, 1501
BstNI CCWGG 3 cut(s) 86, 232, 467
BstNSI RCATGY 1 cut(s) 550
BstPI GGTNACC 1 cut(s) 937
BstV1I GCAGC 4 cut(s) 342, 346, 775, 1475
BstX2I RGATCY 1 cut(s) 128
BstYI RGATCY 1 cut(s) 128
BstZI CGGCCG 1 cut(s) 949
Bsu15I ATCGAT 1 cut(s) 1404
BsuRI GGCC 7 cut(s) 308, 815, 872, 951, 1043, 1322, 1532
BsuTUI ATCGAT 1 cut(s) 1404
BtrI CACGTC 3 cut(s) 28, 293, 958
BtsIMutI CAGTG 1 cut(s) 846
Cac8I GCNNGC 2 cut(s) 761, 1128
CaiI CAGNNNCTG 1 cut(s) 1501
CciI TCATGA 1 cut(s) 714
CfoI GCGC 2 cut(s) 359, 1347
Cfr10I RCCGGY 2 cut(s) 78, 947
Cfr13I GGNCC 2 cut(s) 814, 971
Cfr9I CCCGGG 1 cut(s) 800
ClaI ATCGAT 1 cut(s) 1404
CsiI ACCWGGT 1 cut(s) 84
Csp6I GTAC 6 cut(s) 82, 165, 501, 1090, 1447, 1471
CspAI ACCGGT 1 cut(s) 78
CviAII CATG 5 cut(s) 547, 715, 1045, 1114, 1314
CviQI GTAC 6 cut(s) 82, 165, 501, 1090, 1447, 1471
DdeI CTNAG 4 cut(s) 303, 380, 755, 1422
DpnI GATC 6 cut(s) 34, 130, 258, 798, 1134, 1439
DpnII GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
EaeI YGGCCR 2 cut(s) 949, 1041
EagI CGGCCG 1 cut(s) 949
Eam1104I CTCTTC 3 cut(s) 644, 841, 887
EarI CTCTTC 3 cut(s) 644, 841, 887
EciI GGCGGA 1 cut(s) 215
EclXI CGGCCG 1 cut(s) 949
Eco130I CCWWGG 4 cut(s) 15, 721, 1024, 1533
Eco147I AGGCCT 2 cut(s) 308, 872
Eco47I GGWCC 1 cut(s) 971
Eco52I CGGCCG 1 cut(s) 949
Eco57I CTGAAG 1 cut(s) 1317
Eco88I CYCGRG 3 cut(s) 519, 800, 1568
Eco91I GGTNACC 1 cut(s) 937
EcoO109I RGGNCCY 2 cut(s) 814, 971
EcoO65I GGTNACC 1 cut(s) 937
EcoRII CCWGG 3 cut(s) 84, 230, 465
EcoT14I CCWWGG 4 cut(s) 15, 721, 1024, 1533
ErhI CCWWGG 4 cut(s) 15, 721, 1024, 1533
Esp3I CGTCTC 1 cut(s) 948
FaeI CATG 5 cut(s) 550, 718, 1048, 1117, 1317
FatI CATG 5 cut(s) 546, 714, 1044, 1113, 1313
FauI CCCGC 1 cut(s) 1239
FauNDI CATATG 1 cut(s) 105
FbaI TGATCA 1 cut(s) 1437
FblI GTMKAC 1 cut(s) 1146
Fnu4HI GCNGC 6 cut(s) 331, 360, 516, 764, 1419, 1464
Fsp4HI GCNGC 6 cut(s) 331, 360, 516, 764, 1419, 1464
FspBI CTAG 5 cut(s) 227, 536, 881, 1052, 1584
GlaI GCGC 2 cut(s) 358, 1346
GluI GCNGC 6 cut(s) 331, 360, 516, 764, 1419, 1464
GsaI CCCAGC 1 cut(s) 24
GsuI CTGGAG 4 cut(s) 340, 615, 1028, 1256
HaeII RGCGCY 2 cut(s) 360, 1348
HaeIII GGCC 7 cut(s) 308, 815, 872, 951, 1043, 1322, 1532
HhaI GCGC 2 cut(s) 359, 1347
Hin1II CATG 5 cut(s) 550, 718, 1048, 1117, 1317
Hin6I GCGC 2 cut(s) 357, 1345
HinP1I GCGC 2 cut(s) 357, 1345
HincII GTYRAC 2 cut(s) 454, 751
HindII GTYRAC 2 cut(s) 454, 751
HinfI GANTC 4 cut(s) 455, 1250, 1301, 1388
HphI GGTGA 5 cut(s) 433, 517, 649, 896, 986
Hpy166II GTNNAC 3 cut(s) 454, 751, 1147
Hpy188I TCNGA 4 cut(s) 151, 290, 460, 918
Hpy188III TCNNGA 8 cut(s) 319, 521, 715, 1285, 1337, 1364, 1424, 1595
Hpy8I GTNNAC 3 cut(s) 454, 751, 1147
HpyAV CCTTC 6 cut(s) 245, 1219, 1234, 1312, 1358, 1513
HpyCH4III ACNGT 4 cut(s) 489, 505, 637, 1080
HpyCH4IV ACGT 7 cut(s) 27, 292, 509, 747, 780, 957, 1143
HpyCH4V TGCA 3 cut(s) 208, 362, 1307
HpyF10VI GCNNNNNNNGC 2 cut(s) 1072, 1501
HpyF3I CTNAG 4 cut(s) 303, 380, 755, 1422
HpySE526I ACGT 7 cut(s) 27, 292, 509, 747, 780, 957, 1143
Hsp92II CATG 5 cut(s) 550, 718, 1048, 1117, 1317
HspAI GCGC 2 cut(s) 357, 1345
KflI GGGWCCC 1 cut(s) 971
KpnI GGTACC 1 cut(s) 85
Ksp22I TGATCA 1 cut(s) 1437
Kzo9I GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
LmnI GCTCC 4 cut(s) 918, 1009, 1243, 1342
Lsp1109I GCAGC 4 cut(s) 342, 346, 775, 1475
LweI GCATC 3 cut(s) 418, 721, 1342
MabI ACCWGGT 1 cut(s) 84
MaeI CTAG 5 cut(s) 227, 536, 881, 1052, 1584
MaeII ACGT 7 cut(s) 27, 292, 509, 747, 780, 957, 1143
MaeIII GTNAC 6 cut(s) 439, 505, 538, 937, 992, 1187
MalI GATC 6 cut(s) 34, 130, 258, 798, 1134, 1439
MbiI CCGCTC 3 cut(s) 518, 1246, 1421
MboI GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
MflI RGATCY 1 cut(s) 128
MhlI GDGCHC 2 cut(s) 103, 1121
MlsI TGGCCA 1 cut(s) 1043
MluCI AATT 6 cut(s) 5, 475, 629, 783, 1487, 1606
MluNI TGGCCA 1 cut(s) 1043
MlyI GAGTC 3 cut(s) 449, 1259, 1382
MmeI TCCRAC 1 cut(s) 1062
Mox20I TGGCCA 1 cut(s) 1043
MroXI GAANNNNTTC 2 cut(s) 372, 896
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 1 cut(s) 632
MslI CAYNNNNRTG 2 cut(s) 713, 1596
Msp20I TGGCCA 1 cut(s) 1043
MspA1I CMGCKG 1 cut(s) 857
Mva1269I GAATGC 1 cut(s) 467
MvaI CCWGG 3 cut(s) 86, 232, 467
MwoI GCNNNNNNNGC 2 cut(s) 1072, 1501
NciI CCSGG 9 cut(s) 346, 404, 445, 801, 802, 1157, 1198, 1277, 1378
NdeI CATATG 1 cut(s) 105
NdeII GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
NlaIII CATG 5 cut(s) 550, 718, 1048, 1117, 1317
NlaIV GGNNCC 7 cut(s) 83, 408, 816, 899, 972, 973, 1011
NmeAIII GCCGAG 2 cut(s) 977, 1492
NmuCI GTSAC 3 cut(s) 439, 505, 992
NspI RCATGY 1 cut(s) 550
PagI TCATGA 1 cut(s) 714
PceI AGGCCT 2 cut(s) 308, 872
PcsI WCGNNNNNNNCGW 1 cut(s) 1149
PctI GAATGC 1 cut(s) 467
PdmI GAANNNNTTC 2 cut(s) 372, 896
PfeI GAWTC 1 cut(s) 1301
PfoI TCCNGGA 2 cut(s) 344, 1275
PinAI ACCGGT 1 cut(s) 78
PkrI GCNGC 6 cut(s) 332, 361, 517, 765, 1420, 1465
PleI GAGTC 3 cut(s) 449, 1258, 1382
PpsI GAGTC 3 cut(s) 449, 1258, 1382
PpuMI RGGWCCY 1 cut(s) 971
Psp5II RGGWCCY 1 cut(s) 971
Psp6I CCWGG 3 cut(s) 84, 230, 465
PspEI GGTNACC 1 cut(s) 937
PspFI CCCAGC 1 cut(s) 20
PspGI CCWGG 3 cut(s) 84, 230, 465
PspN4I GGNNCC 7 cut(s) 83, 408, 816, 899, 972, 973, 1011
PspPI GGNCC 2 cut(s) 814, 971
PspPPI RGGWCCY 1 cut(s) 971
PstNI CAGNNNCTG 1 cut(s) 1501
PsuI RGATCY 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 857
RsaI GTAC 6 cut(s) 83, 166, 502, 1091, 1448, 1472
RsaNI GTAC 6 cut(s) 82, 165, 501, 1090, 1447, 1471
RseI CAYNNNNRTG 2 cut(s) 713, 1596
SaqAI TTAA 1 cut(s) 632
SatI GCNGC 6 cut(s) 331, 360, 516, 764, 1419, 1464
Sau3AI GATC 6 cut(s) 32, 128, 256, 796, 1132, 1437
Sau96I GGNCC 2 cut(s) 814, 971
ScaI AGTACT 1 cut(s) 1472
SchI GAGTC 3 cut(s) 449, 1259, 1382
SduI GDGCHC 2 cut(s) 103, 1121
SexAI ACCWGGT 1 cut(s) 84
SfaNI GCATC 3 cut(s) 418, 721, 1342
SinI GGWCC 1 cut(s) 971
SmaI CCCGGG 1 cut(s) 802
SmiMI CAYNNNNRTG 2 cut(s) 713, 1596
SmlI CTYRAG 2 cut(s) 1337, 1505
SmoI CTYRAG 2 cut(s) 1337, 1505
SpeI ACTAGT 2 cut(s) 1051, 1583
Sse9I AATT 6 cut(s) 5, 475, 629, 783, 1487, 1606
SseBI AGGCCT 2 cut(s) 308, 872
SsiI CCGC 4 cut(s) 200, 516, 1246, 1419
SspMI CTAG 5 cut(s) 227, 536, 881, 1052, 1584
StuI AGGCCT 2 cut(s) 308, 872
StyI CCWWGG 4 cut(s) 15, 721, 1024, 1533
TaaI ACNGT 4 cut(s) 489, 505, 637, 1080
TaiI ACGT 7 cut(s) 30, 295, 512, 750, 783, 960, 1146
TaqI TCGA 3 cut(s) 134, 1152, 1404
TasI AATT 6 cut(s) 5, 475, 629, 783, 1487, 1606
TatI WGTACW 3 cut(s) 1089, 1446, 1470
TauI GCSGC 2 cut(s) 518, 1421
TfiI GAWTC 1 cut(s) 1301
Tru1I TTAA 1 cut(s) 632
Tru9I TTAA 1 cut(s) 632
TscAI CASTG 1 cut(s) 853
TseFI GTSAC 3 cut(s) 439, 505, 992
TseI GCWGC 4 cut(s) 330, 359, 763, 1463
Tsp45I GTSAC 3 cut(s) 439, 505, 992
TspDTI ATGAA 7 cut(s) 264, 288, 701, 705, 1102, 1494, 1592
TspGWI ACGGA 1 cut(s) 1233
TspMI CCCGGG 1 cut(s) 800
TspRI CASTG 1 cut(s) 853
VpaK11BI GGWCC 1 cut(s) 971
XapI RAATTY 2 cut(s) 475, 1487
XceI RCATGY 1 cut(s) 550
XcmI CCANNNNNNNNNTGG 1 cut(s) 346
XmaI CCCGGG 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 1146
XmnI GAANNNNTTC 2 cut(s) 372, 896
XspI CTAG 5 cut(s) 227, 536, 881, 1052, 1584
ZrmI AGTACT 1 cut(s) 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.