Rmu_sc0000239.1_g000073

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000239.1
OG0000087
Physical Location & Seq
Forward (+)
429480 .. 434359
4880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000239.1_g000073.1.cds

Sequence Viewer

Length: 2187 bp
atggttgagggctcttcggtttcgacggccctgatgcgttggagattgaatttaagagggaaaccaattgttttccctcacattcgtgaaaaagaagctcagaagacttggaagatttgcagcgaggagaaagggagagccaagggagaagtgtgcgcacctatagcgagatttgaggtccccggtaccgtagttagcatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgcctggcaagctgaagtggatatcgaccggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcagagagtagtgaggagtctaacgagggtgagagcgaggatggatctgcggaggccccggtagtcacagttgccattcccgagggcataccaaagccgaggtatacacttgcggatgggaccgtattcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgcgacttaagtgggggataccggacgcggtggatcttaggcctctcagggatggagagatggccgcgaatcctgccccggggtgggtggcgctgcatgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtatttgctgcggatgctgaacctgtccccggggcaactgaccccgaatgccattcgccaaatatacagtatgatggctatgtgggaattttgccaacaagggtggccttccataaacgaattccgcgcggtacatcgggtactgtactcaaggaagcagtcttgtgcgggtacggttacatttgccgctagggattacgaaccactagttaccgacatgccttcgtcgatgagcaaaaggtggaggaacaaagtgttcctagctgggaggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatacgctatccgacctagaaaggaagaggatagcccgggtatatgccgtgtggtcagagaaagagatgagctcttataggttcatccggcactctatactttataggctagggctagggtggctccccgtgaaagcaccgaagaggaaaccccggaaaggcaaggaggaggacagaatggatgatgcccaattgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacaagtcggttaattgaagaaacccttctggagttcaccgatgagggatatggtgaacctgaccccgatgctcccgtgacccacgtcgcgcagccctccatggccgacgttatcacgatagatgacaccgggacgggaaaggtaccggcccccgtgcctatttcctctcgttccactgggagcgatgaggcattgcttcccggtgagaagaagagatcccataggcaccggcatcaaagtgataaggaggtgacgtacactggccgggatgttcaaggttttggtgcgaagaggcagaagaaagatcacctgggaccagagtcgtcaccttcgcttggcttgttatctcccgccattccggtaatccctaagaagcctatcacgcagctgttgagtgagtacggggttgccgatgaaaagttcatgcggtccatgcttaatgacctgaaggatattgacctcgaccgggttcgggccaaggataatacgccccaggagaatcgccttcttgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctttccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgaatgctgagatggccgccgctaagcagcggatcgcagagcttgagggtgaagtctctgaggcgctggaagaggtaaagaacacccgggactccgagaaaaaagctgcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcgccttcccgaggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

728

Amino Acids

81.67

Weight (kDa)

5.73

Isoelectric Point (pI)

45.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1855
Acc16I TGCGCA 1 cut(s) 157
Acc36I ACCTGC 1 cut(s) 1855
Acc65I GGTACC 3 cut(s) 185, 965, 1396
AccB1I GGYRCC 5 cut(s) 185, 648, 965, 1396, 1479
AccB7I CCANNNNNTGG 1 cut(s) 1189
AccBSI CCGCTC 1 cut(s) 1909
AccI GTMKAC 2 cut(s) 440, 1236
AccII CGCG 5 cut(s) 536, 575, 783, 785, 1343
AclWI GGATC 8 cut(s) 238, 312, 325, 388, 549, 1464, 1958, 2079
AcoI YGGCCR 4 cut(s) 570, 1356, 1516, 1932
AcsI RAATTY 4 cut(s) 49, 743, 776, 2174
AcuI CTGAAG 3 cut(s) 282, 1721, 1856
AcyI GRCGYC 2 cut(s) 1218, 1812
AflII CTTAAG 1 cut(s) 515
AgeI ACCGGT 2 cut(s) 276, 962
AgsI TTSAA 6 cut(s) 49, 1271, 1529, 1795, 1921, 2179
AhdI GACNNNNNGTC 1 cut(s) 1243
AhlI ACTAGT 1 cut(s) 862
AjiI CACGTC 1 cut(s) 1339
AjnI CCWGG 6 cut(s) 212, 251, 1206, 1563, 1746, 2064
AleI CACNNNNGTG 1 cut(s) 84
AloI GAACNNNNNNTCC 2 cut(s) 302, 334
Alw21I GWGCWC 2 cut(s) 1067, 2130
Alw26I GTCTC 1 cut(s) 1978
AlwI GGATC 8 cut(s) 238, 312, 325, 388, 549, 1464, 1958, 2079
AlwNI CAGNNNCTG 1 cut(s) 2033
Ama87I CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
ApoI RAATTY 4 cut(s) 49, 743, 776, 2174
AsiGI ACCGGT 2 cut(s) 276, 962
Asp700I GAANNNNTTC 1 cut(s) 1278
Asp718I GGTACC 3 cut(s) 185, 965, 1396
AspA2I CCTAGG 1 cut(s) 1240
AspLEI GCGC 5 cut(s) 158, 601, 785, 1345, 1984
AsuHPI GGTGA 9 cut(s) 377, 1282, 1319, 1469, 1516, 1553, 1572, 1879, 1979
AvaI CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
AvaII GGWCC 5 cut(s) 178, 456, 985, 1568, 1683
AvrII CCTAGG 1 cut(s) 1240
BaeGI GKGCMC 1 cut(s) 1789
BaeI ACNNNNGTAYC 2 cut(s) 177, 210
BamHI GGATCC 1 cut(s) 317
BanI GGYRCC 5 cut(s) 185, 648, 965, 1396, 1479
BanII GRGCYC 3 cut(s) 14, 1067, 2130
BauI CACGAG 1 cut(s) 2093
BbsI GAAGAC 3 cut(s) 110, 237, 1221
Bbv12I GWGCWC 2 cut(s) 1067, 2130
BccI CCATC 8 cut(s) 371, 446, 554, 562, 724, 1183, 1195, 1924
BceAI ACGGC 4 cut(s) 42, 1025, 2021, 2084
BciT130I CCWGG 6 cut(s) 214, 253, 1208, 1565, 1748, 2066
BciVI GTATCC 2 cut(s) 217, 519
BcoDI GTCTC 1 cut(s) 1978
BcuI ACTAGT 1 cut(s) 862
BfaI CTAG 7 cut(s) 846, 863, 917, 1010, 1103, 1109, 1241
BfmI CTRYAG 3 cut(s) 162, 653, 2025
BfoI RGCGCY 2 cut(s) 602, 1985
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 1855
BfuI GTATCC 2 cut(s) 217, 519
BlnI CCTAGG 1 cut(s) 1240
BlpI GCTNAGC 1 cut(s) 1941
Bme18I GGWCC 5 cut(s) 178, 456, 985, 1568, 1683
BmeRI GACNNNNNGTC 1 cut(s) 1243
BmeT110I CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
BmgBI CACGTC 1 cut(s) 1339
BmrI ACTGGG 2 cut(s) 336, 1440
BmsI GCATC 6 cut(s) 24, 660, 1168, 1312, 1495, 1770
BmuI ACTGGG 2 cut(s) 336, 1440
BoxI GACNNNNGTC 2 cut(s) 1337, 1573
BpiI GAAGAC 3 cut(s) 110, 237, 1221
BplI GAGNNNNNCTC 4 cut(s) 1049, 1081, 1898, 1930
BpmI CTGGAG 3 cut(s) 1304, 1919, 2087
Bpu1102I GCTNAGC 1 cut(s) 1941
BpuEI CTTGAG 2 cut(s) 790, 1982
Bsa29I ATCGAT 1 cut(s) 1230
BsaBI GATNNNNATC 1 cut(s) 1830
BsaHI GRCGYC 2 cut(s) 1218, 1812
BsaWI WCCGGW 4 cut(s) 276, 529, 962, 1612
BsaXI ACNNNNNCTCC 4 cut(s) 1493, 1523, 2099, 2129
Bse118I RCCGGY 4 cut(s) 276, 962, 1399, 1482
Bse1I ACTGG 5 cut(s) 241, 331, 988, 1435, 1519
Bse3DI GCAATG 1 cut(s) 1445
Bse8I GATNNNNATC 1 cut(s) 1830
BseBI CCWGG 6 cut(s) 214, 253, 1208, 1565, 1748, 2066
BseCI ATCGAT 1 cut(s) 1230
BseGI GGATG 7 cut(s) 382, 457, 565, 675, 1077, 1180, 1528
BseJI GATNNNNATC 1 cut(s) 1830
BseMI GCAATG 1 cut(s) 1445
BseMII CTCAG 5 cut(s) 113, 351, 568, 1917, 1968
BseNI ACTGG 5 cut(s) 241, 331, 988, 1435, 1519
BseRI GAGGAG 6 cut(s) 140, 365, 1175, 1856, 2099, 2120
BseSI GKGCMC 1 cut(s) 1789
BseYI CCCAGC 1 cut(s) 920
Bsh1236I CGCG 5 cut(s) 536, 575, 783, 785, 1343
Bsh1285I CGRYCG 2 cut(s) 277, 1720
BshNI GGYRCC 5 cut(s) 185, 648, 965, 1396, 1479
BshTI ACCGGT 2 cut(s) 276, 962
BshVI ATCGAT 1 cut(s) 1230
BsiEI CGRYCG 2 cut(s) 277, 1720
BsiHKAI GWGCWC 2 cut(s) 1067, 2130
BsiHKCI CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
BslFI GGGAC 8 cut(s) 164, 469, 667, 998, 1399, 1581, 1925, 2021
BsmAI GTCTC 1 cut(s) 1978
BsmFI GGGAC 8 cut(s) 164, 469, 667, 998, 1399, 1581, 1925, 2021
BsmI GAATGC 2 cut(s) 709, 1927
BsoBI CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
Bsp1286I GDGCHC 4 cut(s) 14, 1067, 1789, 2130
Bsp1720I GCTNAGC 1 cut(s) 1941
Bsp19I CCATGG 1 cut(s) 1353
BspCNI CTCAG 5 cut(s) 112, 350, 567, 1918, 1969
BspDI ATCGAT 1 cut(s) 1230
BspFNI CGCG 5 cut(s) 536, 575, 783, 785, 1343
BspHI TCATGA 1 cut(s) 2169
BspMAI CTGCAG 1 cut(s) 2029
BspMI ACCTGC 1 cut(s) 1855
BspPI GGATC 8 cut(s) 238, 312, 325, 388, 549, 1464, 1958, 2079
BspQI GCTCTTC 2 cut(s) 19, 2118
BspT107I GGYRCC 5 cut(s) 185, 648, 965, 1396, 1479
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 1909
BsrDI GCAATG 1 cut(s) 1445
BsrFI RCCGGY 4 cut(s) 276, 962, 1399, 1482
BsrI ACTGG 5 cut(s) 241, 331, 988, 1435, 1519
BssAI RCCGGY 4 cut(s) 276, 962, 1399, 1482
BssNAI GTATAC 1 cut(s) 441
BssNI GRCGYC 2 cut(s) 1218, 1812
BssSI CACGAG 1 cut(s) 2093
BssT1I CCWWGG 5 cut(s) 141, 622, 1240, 1353, 1731
Bst1107I GTATAC 1 cut(s) 441
Bst2BI CACGAG 1 cut(s) 2093
Bst2UI CCWGG 6 cut(s) 214, 253, 1208, 1565, 1748, 2066
Bst4CI ACNGT 7 cut(s) 190, 406, 460, 657, 725, 801, 832
Bst6I CTCTTC 8 cut(s) 19, 1013, 1130, 1460, 1538, 1796, 1983, 2118
BstACI GRCGYC 2 cut(s) 1218, 1812
BstAFI CTTAAG 1 cut(s) 515
BstAPI GCANNNNNTGC 1 cut(s) 2033
BstC8I GCNNGC 4 cut(s) 258, 1785, 1816, 2142
BstDEI CTNAG 9 cut(s) 99, 283, 337, 545, 554, 1623, 1926, 1941, 1977
BstDSI CCRYGG 2 cut(s) 1353, 2100
BstENI CCTNNNNNAGG 1 cut(s) 2081
BstF5I GGATG 7 cut(s) 382, 457, 565, 675, 1077, 1180, 1528
BstFNI CGCG 5 cut(s) 536, 575, 783, 785, 1343
BstH2I RGCGCY 2 cut(s) 602, 1985
BstHHI GCGC 5 cut(s) 158, 601, 785, 1345, 1984
BstMAI GTCTC 1 cut(s) 1978
BstMCI CGRYCG 2 cut(s) 277, 1720
BstNI CCWGG 6 cut(s) 214, 253, 1208, 1565, 1748, 2066
BstNSI RCATGY 2 cut(s) 511, 877
BstPAI GACNNNNGTC 2 cut(s) 1337, 1573
BstSFI CTRYAG 3 cut(s) 162, 653, 2025
BstSLI GKGCMC 1 cut(s) 1789
BstUI CGCG 5 cut(s) 536, 575, 783, 785, 1343
BstV2I GAAGAC 3 cut(s) 110, 237, 1221
BstX2I RGATCY 4 cut(s) 317, 380, 541, 1469
BstYI RGATCY 4 cut(s) 317, 380, 541, 1469
BstZ17I GTATAC 1 cut(s) 441
Bsu15I ATCGAT 1 cut(s) 1230
BsuI GTATCC 2 cut(s) 217, 519
BsuTUI ATCGAT 1 cut(s) 1230
BtgI CCRYGG 2 cut(s) 1353, 2100
BtgZI GCGATG 2 cut(s) 1452, 2116
BtrI CACGTC 1 cut(s) 1339
BtsCI GGATG 7 cut(s) 382, 457, 565, 675, 1077, 1180, 1528
BtsIMutI CAGTG 2 cut(s) 1428, 1512
BveI ACCTGC 1 cut(s) 1855
Cac8I GCNNGC 4 cut(s) 258, 1785, 1816, 2142
CaiI CAGNNNCTG 1 cut(s) 2033
CciI TCATGA 1 cut(s) 2169
CfoI GCGC 5 cut(s) 158, 601, 785, 1345, 1984
Cfr10I RCCGGY 4 cut(s) 276, 962, 1399, 1482
Cfr9I CCCGGG 6 cut(s) 473, 586, 685, 1029, 1767, 2004
ClaI ATCGAT 1 cut(s) 1230
CseI GACGC 3 cut(s) 542, 1226, 1820
CspAI ACCGGT 2 cut(s) 276, 962
CspCI CAANNNNNGTGG 2 cut(s) 740, 775
DdeI CTNAG 9 cut(s) 99, 283, 337, 545, 554, 1623, 1926, 1941, 1977
DriI GACNNNNNGTC 1 cut(s) 1243
EaeI YGGCCR 4 cut(s) 570, 1356, 1516, 1932
Eam1104I CTCTTC 8 cut(s) 19, 1013, 1130, 1460, 1538, 1796, 1983, 2118
Eam1105I GACNNNNNGTC 1 cut(s) 1243
EarI CTCTTC 8 cut(s) 19, 1013, 1130, 1460, 1538, 1796, 1983, 2118
Ecl136II GAGCTC 2 cut(s) 1065, 2128
Eco130I CCWWGG 5 cut(s) 141, 622, 1240, 1353, 1731
Eco147I AGGCCT 1 cut(s) 550
Eco24I GRGCYC 3 cut(s) 14, 1067, 2130
Eco32I GATATC 1 cut(s) 271
Eco47I GGWCC 5 cut(s) 178, 456, 985, 1568, 1683
Eco53kI GAGCTC 2 cut(s) 1065, 2128
Eco57I CTGAAG 3 cut(s) 282, 1721, 1856
Eco88I CYCGRG 8 cut(s) 416, 473, 586, 685, 1029, 1767, 2004, 2081
EcoICRI GAGCTC 2 cut(s) 1065, 2128
EcoNI CCTNNNNNAGG 1 cut(s) 2081
EcoO109I RGGNCCY 2 cut(s) 178, 391
EcoRI GAATTC 1 cut(s) 776
EcoRII CCWGG 6 cut(s) 212, 251, 1206, 1563, 1746, 2064
EcoRV GATATC 1 cut(s) 271
EcoT14I CCWWGG 5 cut(s) 141, 622, 1240, 1353, 1731
EcoT38I GRGCYC 3 cut(s) 14, 1067, 2130
ErhI CCWWGG 5 cut(s) 141, 622, 1240, 1353, 1731
FalI AAGNNNNNCTT 4 cut(s) 1206, 1238, 1263, 1295
FaqI GGGAC 8 cut(s) 164, 469, 667, 998, 1399, 1581, 1925, 2021
FauI CCCGC 4 cut(s) 817, 1612, 1776, 1902
FblI GTMKAC 2 cut(s) 440, 1236
FokI GGATG 7 cut(s) 389, 464, 572, 682, 1064, 1187, 1535
FriOI GRGCYC 3 cut(s) 14, 1067, 2130
FspAI RTGCGCAY 1 cut(s) 157
FspBI CTAG 7 cut(s) 846, 863, 917, 1010, 1103, 1109, 1241
FspI TGCGCA 1 cut(s) 157
GlaI GCGC 5 cut(s) 157, 600, 784, 1344, 1983
GsaI CCCAGC 1 cut(s) 924
GsuI CTGGAG 3 cut(s) 1304, 1919, 2087
HaeII RGCGCY 2 cut(s) 602, 1985
HgaI GACGC 3 cut(s) 542, 1226, 1820
HhaI GCGC 5 cut(s) 158, 601, 785, 1345, 1984
Hin1I GRCGYC 2 cut(s) 1218, 1812
Hin6I GCGC 5 cut(s) 156, 599, 783, 1343, 1982
HinP1I GCGC 5 cut(s) 156, 599, 783, 1343, 1982
HincII GTYRAC 1 cut(s) 1237
HindII GTYRAC 1 cut(s) 1237
HphI GGTGA 9 cut(s) 377, 1282, 1319, 1469, 1516, 1553, 1572, 1879, 1979
Hpy166II GTNNAC 6 cut(s) 441, 1237, 1290, 1310, 1512, 1801
Hpy188I TCNGA 9 cut(s) 102, 208, 340, 1006, 1051, 1836, 1978, 2014, 2122
Hpy188III TCNNGA 6 cut(s) 86, 416, 1283, 1369, 2081, 2170
Hpy8I GTNNAC 6 cut(s) 441, 1237, 1290, 1310, 1512, 1801
Hpy99I CGWCG 6 cut(s) 28, 238, 470, 886, 1343, 1364
HpyCH4III ACNGT 7 cut(s) 190, 406, 460, 657, 725, 801, 832
HpyCH4IV ACGT 3 cut(s) 1338, 1362, 1508
HpyCH4V TGCA 3 cut(s) 120, 604, 2027
HpyF3I CTNAG 9 cut(s) 99, 283, 337, 545, 554, 1623, 1926, 1941, 1977
HpySE526I ACGT 3 cut(s) 1338, 1362, 1508
Hsp92I GRCGYC 2 cut(s) 1218, 1812
HspAI GCGC 5 cut(s) 156, 599, 783, 1343, 1982
KpnI GGTACC 3 cut(s) 189, 969, 1400
LguI GCTCTTC 2 cut(s) 19, 2118
LmnI GCTCC 5 cut(s) 621, 1122, 1330, 1434, 1906
LweI GCATC 6 cut(s) 24, 660, 1168, 1312, 1495, 1770
MaeI CTAG 7 cut(s) 846, 863, 917, 1010, 1103, 1109, 1241
MaeII ACGT 3 cut(s) 1338, 1362, 1508
MaeIII GTNAC 6 cut(s) 400, 832, 865, 1330, 1504, 1578
MbiI CCGCTC 1 cut(s) 1909
MfeI CAATTG 2 cut(s) 66, 1184
MflI RGATCY 4 cut(s) 317, 380, 541, 1469
MhlI GDGCHC 4 cut(s) 14, 1067, 1789, 2130
MluCI AATT 9 cut(s) 49, 66, 299, 743, 776, 936, 1184, 1266, 2174
MlyI GAGTC 5 cut(s) 362, 1583, 1907, 2003, 2039
MmeI TCCRAC 2 cut(s) 20, 1029
MroXI GAANNNNTTC 1 cut(s) 1278
MseI TTAA 5 cut(s) 53, 516, 939, 1265, 1692
MslI CAYNNNNRTG 5 cut(s) 84, 506, 1230, 1491, 2135
MspA1I CMGCKG 4 cut(s) 640, 958, 1642, 1948
MspCI CTTAAG 1 cut(s) 515
MunI CAATTG 2 cut(s) 66, 1184
Mva1269I GAATGC 2 cut(s) 709, 1927
MvaI CCWGG 6 cut(s) 214, 253, 1208, 1565, 1748, 2066
MvnI CGCG 5 cut(s) 536, 575, 783, 785, 1343
NcoI CCATGG 1 cut(s) 1353
NmeAIII GCCGAG 2 cut(s) 314, 459
NmuCI GTSAC 4 cut(s) 400, 1330, 1504, 1578
NsbI TGCGCA 1 cut(s) 157
NspI RCATGY 2 cut(s) 511, 877
OliI CACNNNNGTG 1 cut(s) 84
PagI TCATGA 1 cut(s) 2169
PaqCI CACCTGC 1 cut(s) 1855
PceI AGGCCT 1 cut(s) 550
PciSI GCTCTTC 2 cut(s) 19, 2118
PcsI WCGNNNNNNNCGW 3 cut(s) 233, 320, 1662
PctI GAATGC 2 cut(s) 709, 1927
PdmI GAANNNNTTC 1 cut(s) 1278
PfeI GAWTC 5 cut(s) 203, 577, 610, 1753, 1772
PflMI CCANNNNNTGG 1 cut(s) 1189
PinAI ACCGGT 2 cut(s) 276, 962
PleI GAGTC 5 cut(s) 361, 1582, 1907, 2003, 2038
PpsI GAGTC 5 cut(s) 361, 1582, 1907, 2003, 2038
PpuMI RGGWCCY 1 cut(s) 178
PshAI GACNNNNGTC 2 cut(s) 1337, 1573
Psp124BI GAGCTC 2 cut(s) 1067, 2130
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 6 cut(s) 212, 251, 1206, 1563, 1746, 2064
PspFI CCCAGC 1 cut(s) 920
PspGI CCWGG 6 cut(s) 212, 251, 1206, 1563, 1746, 2064
PspPPI RGGWCCY 1 cut(s) 178
PstI CTGCAG 1 cut(s) 2029
PstNI CAGNNNCTG 1 cut(s) 2033
PsuI RGATCY 4 cut(s) 317, 380, 541, 1469
PvuII CAGCTG 2 cut(s) 958, 1642
RseI CAYNNNNRTG 5 cut(s) 84, 506, 1230, 1491, 2135
SacI GAGCTC 2 cut(s) 1067, 2130
SalI GTCGAC 1 cut(s) 1235
SapI GCTCTTC 2 cut(s) 19, 2118
SaqAI TTAA 5 cut(s) 53, 516, 939, 1265, 1692
SchI GAGTC 5 cut(s) 362, 1583, 1907, 2003, 2039
SduI GDGCHC 4 cut(s) 14, 1067, 1789, 2130
SfaNI GCATC 6 cut(s) 24, 660, 1168, 1312, 1495, 1770
SfcI CTRYAG 3 cut(s) 162, 653, 2025
SinI GGWCC 5 cut(s) 178, 456, 985, 1568, 1683
SmaI CCCGGG 6 cut(s) 475, 588, 687, 1031, 1769, 2006
SmiMI CAYNNNNRTG 5 cut(s) 84, 506, 1230, 1491, 2135
SmlI CTYRAG 3 cut(s) 515, 805, 1961
SmoI CTYRAG 3 cut(s) 515, 805, 1961
SpeI ACTAGT 1 cut(s) 862
Sse9I AATT 9 cut(s) 49, 66, 299, 743, 776, 936, 1184, 1266, 2174
SseBI AGGCCT 1 cut(s) 550
SspMI CTAG 7 cut(s) 846, 863, 917, 1010, 1103, 1109, 1241
SstI GAGCTC 2 cut(s) 1067, 2130
StuI AGGCCT 1 cut(s) 550
StyI CCWWGG 5 cut(s) 141, 622, 1240, 1353, 1731
TaaI ACNGT 7 cut(s) 190, 406, 460, 657, 725, 801, 832
TaiI ACGT 3 cut(s) 1341, 1365, 1511
TasI AATT 9 cut(s) 49, 66, 299, 743, 776, 936, 1184, 1266, 2174
TatI WGTACW 2 cut(s) 801, 2109
TauI GCSGC 4 cut(s) 575, 845, 1937, 1940
TfiI GAWTC 5 cut(s) 203, 577, 610, 1753, 1772
Tru1I TTAA 5 cut(s) 53, 516, 939, 1265, 1692
Tru9I TTAA 5 cut(s) 53, 516, 939, 1265, 1692
TscAI CASTG 2 cut(s) 1435, 1519
TseFI GTSAC 4 cut(s) 400, 1330, 1504, 1578
Tsp45I GTSAC 4 cut(s) 400, 1330, 1504, 1578
TspDTI ATGAA 6 cut(s) 506, 1066, 1666, 1683, 1868, 2186
TspMI CCCGGG 6 cut(s) 473, 586, 685, 1029, 1767, 2004
TspRI CASTG 2 cut(s) 1435, 1519
Van91I CCANNNNNTGG 1 cut(s) 1189
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 5 cut(s) 178, 456, 985, 1568, 1683
XagI CCTNNNNNAGG 1 cut(s) 2081
XapI RAATTY 4 cut(s) 49, 743, 776, 2174
XceI RCATGY 2 cut(s) 511, 877
XmaI CCCGGG 6 cut(s) 473, 586, 685, 1029, 1767, 2004
XmaJI CCTAGG 1 cut(s) 1240
XmiI GTMKAC 2 cut(s) 440, 1236
XmnI GAANNNNTTC 1 cut(s) 1278
XspI CTAG 7 cut(s) 846, 863, 917, 1010, 1103, 1109, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.