Rmu_sc0006945.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006945.1
OG0000087
Physical Location & Seq
Forward (+)
25357 .. 27613
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006945.1_g000006.1.cds

Sequence Viewer

Length: 2118 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctaccaggcaagctgaagtggacatcgatcggtacctaggccgggtagaccaattagcggagaacatggggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagtcacagtggccattcccgagggcattcctaagccgaggtacacgcttttggacaggaccgtatgcgacgaacctgggagaagcatgacgatgaaggcgatcgtagacatgcggttgaagtgggggataccggacgcagtagagcttaggcctcttagggatggggagatggccgcgaatcttgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctacggatgctgaacctgtcaccggggcagctgtccccgaatgccgttcgccaaatatatagtatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccacgcggtacaccgggtattgtactctaggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccggtagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagaaaaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatacgctatccgaagtagagaagaagaggatagcccgggtatatgccgtgtggtcagagaaggagaggagctcttataggttcatccggcactctatactttttaggctaggattaggagggctcccggtgaaagccccgaagaggaaacctcggaaaggcaaggaggaggataggatggatgacgctcaactgatggacatgctgatgagccagggagaagatgccctacacatcgacgtcgacctagggtcgaaaggcacgagtcggtctattgaagagacccttttggagataaccgatgagggatacggtgaacccgatcccgacgcccctgtggcccacgccgtgcagacttccatggcagatgtcattacgatagatgacaccggaatggtaaaagtaccggcctcagtgcctatttcttctcgctctactgggagcgatgaggcgttactccccggtgagaagaagagatcccacaagcaccggcatcgaactgataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgggatcagggccatcaccttctcttggcctgttgtctccggccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaatatggggttgccgatgaaaagttcgtgcggtctatgcttggggatctgaaggatattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgaggaggatgctcatctgaaggaggaggttagcaatctctccaggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggttgagatggccgcctctaagcagcggattgcagagcttgagggtgaggttgctgaggcgctggaggaggtaaagaacgctcgggactccgagaagaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaagatcgccttcccccggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctccatgctggctgctgcccaagataaggctatcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaggccaaattcaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcggacaagtccggtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

705

Amino Acids

78.57

Weight (kDa)

6.25

Isoelectric Point (pI)

46.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1657
AatII GACGTC 1 cut(s) 1038
Acc36I ACCTGC 1 cut(s) 1657
Acc65I GGTACC 2 cut(s) 81, 767
AccB1I GGYRCC 4 cut(s) 81, 450, 767, 2078
AccBSI CCGCTC 2 cut(s) 1711, 2056
AccI GTMKAC 3 cut(s) 96, 306, 1038
AccII CGCG 2 cut(s) 377, 587
AclWI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1506
AcoI YGGCCR 7 cut(s) 210, 372, 534, 1318, 1407, 1734, 1995
AcsI RAATTY 1 cut(s) 2018
AcuI CTGAAG 3 cut(s) 84, 1523, 1658
AcyI GRCGYC 3 cut(s) 1035, 1125, 1614
AdeI CACNNNGTG 1 cut(s) 1144
AgeI ACCGGT 1 cut(s) 764
AgsI TTSAA 3 cut(s) 319, 1073, 1597
AhdI GACNNNNNGTC 1 cut(s) 1045
AjnI CCWGG 8 cut(s) 14, 53, 274, 1008, 1329, 1548, 1661, 2034
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 1 cut(s) 869
Alw26I GTCTC 6 cut(s) 1070, 1407, 1568, 1846, 2036, 2094
AlwI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1506
AlwNI CAGNNNCTG 3 cut(s) 463, 1447, 1835
Ama87I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
ApeKI GCWGC 9 cut(s) 403, 493, 757, 1441, 1444, 1747, 1826, 1946, 1949
ApoI RAATTY 1 cut(s) 2018
AsiGI ACCGGT 1 cut(s) 764
Asp718I GGTACC 2 cut(s) 81, 767
AspA2I CCTAGG 2 cut(s) 85, 1042
AspLEI GCGC 2 cut(s) 403, 1786
AspS9I GGNCC 7 cut(s) 120, 193, 258, 544, 787, 1135, 1376
AvaI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
AvaII GGWCC 4 cut(s) 120, 258, 544, 787
AvrII CCTAGG 2 cut(s) 85, 1042
BaeGI GKGCMC 1 cut(s) 1591
BalI TGGCCA 2 cut(s) 212, 536
BanI GGYRCC 4 cut(s) 81, 450, 767, 2078
BanII GRGCYC 2 cut(s) 869, 921
BarI GAAGNNNNNNTAC 2 cut(s) 1008, 1040
BauI CACGAG 3 cut(s) 407, 1057, 1895
BbsI GAAGAC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 869
BbvCI CCTCAGC 1 cut(s) 1779
BbvI GCAGC 9 cut(s) 390, 505, 769, 1431, 1453, 1759, 1813, 1933, 1936
BceAI ACGGC 7 cut(s) 494, 827, 1127, 1394, 1545, 1823, 1886
BcgI CGANNNNNNTGC 4 cut(s) 1271, 1305, 1610, 1644
BciT130I CCWGG 8 cut(s) 16, 55, 276, 1010, 1331, 1550, 1663, 2036
BciVI GTATCC 3 cut(s) 19, 321, 1097
BcoDI GTCTC 6 cut(s) 1070, 1407, 1568, 1846, 2036, 2094
BfaI CTAG 6 cut(s) 86, 609, 648, 719, 905, 1043
BfmI CTRYAG 2 cut(s) 455, 1827
BfoI RGCGCY 2 cut(s) 404, 1787
BfuAI ACCTGC 1 cut(s) 1657
BfuI GTATCC 3 cut(s) 19, 321, 1097
BglI GCCNNNNNGGC 1 cut(s) 1133
BlnI CCTAGG 2 cut(s) 85, 1042
Bme18I GGWCC 4 cut(s) 120, 258, 544, 787
BmeRI GACNNNNNGTC 1 cut(s) 1045
BmeT110I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
BmgT120I GGNCC 7 cut(s) 120, 193, 258, 544, 787, 1135, 1376
BmiI GGNNCC 9 cut(s) 83, 121, 195, 452, 545, 769, 788, 920, 2080
BmrI ACTGGG 2 cut(s) 138, 1242
BmsI GCATC 5 cut(s) 462, 1009, 1297, 1572, 1618
BmuI ACTGGG 2 cut(s) 138, 1242
BpiI GAAGAC 1 cut(s) 39
BplI GAGNNNNNCTC 8 cut(s) 851, 883, 931, 963, 1700, 1732, 1919, 1951
BpmI CTGGAG 4 cut(s) 1645, 1721, 1808, 2057
Bpu10I CCTNAGC 3 cut(s) 231, 347, 1779
BpuEI CTTGAG 1 cut(s) 1784
Bsa29I ATCGAT 1 cut(s) 75
BsaBI GATNNNNATC 2 cut(s) 1632, 2106
BsaHI GRCGYC 3 cut(s) 1035, 1125, 1614
BsaI GGTCTC 3 cut(s) 1070, 2036, 2094
BsaWI WCCGGW 5 cut(s) 331, 764, 1184, 1414, 2075
BsaXI ACNNNNNCTCC 4 cut(s) 1295, 1325, 1901, 1931
Bse118I RCCGGY 5 cut(s) 661, 764, 1201, 1284, 2081
Bse1I ACTGG 6 cut(s) 43, 133, 790, 1237, 1321, 1342
Bse8I GATNNNNATC 2 cut(s) 1632, 2106
BseBI CCWGG 8 cut(s) 16, 55, 276, 1010, 1331, 1550, 1663, 2036
BseCI ATCGAT 1 cut(s) 75
BseGI GGATG 8 cut(s) 367, 477, 879, 978, 982, 1330, 1633, 1930
BseJI GATNNNNATC 2 cut(s) 1632, 2106
BseMII CTCAG 3 cut(s) 1221, 1770, 2105
BseNI ACTGG 6 cut(s) 43, 133, 790, 1237, 1321, 1342
BseRI GAGGAG 6 cut(s) 877, 977, 1637, 1658, 1805, 1922
BseSI GKGCMC 1 cut(s) 1591
BseX3I CGGCCG 2 cut(s) 1407, 1995
BseXI GCAGC 9 cut(s) 390, 505, 769, 1431, 1453, 1759, 1813, 1933, 1936
BsgI GTGCAG 2 cut(s) 389, 1166
Bsh1236I CGCG 2 cut(s) 377, 587
Bsh1285I CGRYCG 5 cut(s) 79, 303, 1410, 1522, 1998
BshNI GGYRCC 4 cut(s) 81, 450, 767, 2078
BshTI ACCGGT 1 cut(s) 764
BshVI ATCGAT 1 cut(s) 75
BsiEI CGRYCG 5 cut(s) 79, 303, 1410, 1522, 1998
BsiHKAI GWGCWC 1 cut(s) 869
BsiHKCI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
BslFI GGGAC 5 cut(s) 484, 557, 800, 1727, 1823
BsmAI GTCTC 6 cut(s) 1070, 1407, 1568, 1846, 2036, 2094
BsmBI CGTCTC 2 cut(s) 1568, 1846
BsmFI GGGAC 5 cut(s) 484, 557, 800, 1727, 1823
BsmI GAATGC 2 cut(s) 225, 511
Bso31I GGTCTC 3 cut(s) 1070, 2036, 2094
BsoBI CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
Bsp1286I GDGCHC 3 cut(s) 869, 921, 1591
Bsp19I CCATGG 1 cut(s) 1155
BspCNI CTCAG 3 cut(s) 1220, 1771, 2104
BspDI ATCGAT 1 cut(s) 75
BspFNI CGCG 2 cut(s) 377, 587
BspHI TCATGA 1 cut(s) 1971
BspLI GGNNCC 9 cut(s) 83, 121, 195, 452, 545, 769, 788, 920, 2080
BspMAI CTGCAG 1 cut(s) 1831
BspMI ACCTGC 1 cut(s) 1657
BspPI GGATC 6 cut(s) 40, 190, 1112, 1266, 1378, 1506
BspT107I GGYRCC 4 cut(s) 81, 450, 767, 2078
BspTNI GGTCTC 3 cut(s) 1070, 2036, 2094
BsrBI CCGCTC 2 cut(s) 1711, 2056
BsrFI RCCGGY 5 cut(s) 661, 764, 1201, 1284, 2081
BsrI ACTGG 6 cut(s) 43, 133, 790, 1237, 1321, 1342
BssAI RCCGGY 5 cut(s) 661, 764, 1201, 1284, 2081
BssNI GRCGYC 3 cut(s) 1035, 1125, 1614
BssSI CACGAG 3 cut(s) 407, 1057, 1895
BssT1I CCWWGG 4 cut(s) 85, 424, 1042, 1155
Bst2BI CACGAG 3 cut(s) 407, 1057, 1895
Bst2UI CCWGG 8 cut(s) 16, 55, 276, 1010, 1331, 1550, 1663, 2036
Bst4CI ACNGT 5 cut(s) 208, 262, 459, 634, 1109
Bst6I CTCTTC 6 cut(s) 815, 932, 1068, 1262, 1340, 1598
BstACI GRCGYC 3 cut(s) 1035, 1125, 1614
BstAPI GCANNNNNTGC 1 cut(s) 1835
BstC8I GCNNGC 5 cut(s) 60, 554, 1587, 1618, 1944
BstDEI CTNAG 8 cut(s) 231, 347, 356, 1207, 1743, 1779, 2005, 2091
BstDSI CCRYGG 2 cut(s) 1155, 1902
BstEII GGTNACC 1 cut(s) 634
BstENI CCTNNNNNAGG 1 cut(s) 951
BstF5I GGATG 8 cut(s) 367, 477, 879, 978, 982, 1330, 1633, 1930
BstFNI CGCG 2 cut(s) 377, 587
BstH2I RGCGCY 2 cut(s) 404, 1787
BstHHI GCGC 2 cut(s) 403, 1786
BstMAI GTCTC 6 cut(s) 1070, 1407, 1568, 1846, 2036, 2094
BstMCI CGRYCG 5 cut(s) 79, 303, 1410, 1522, 1998
BstMWI GCNNNNNNNGC 9 cut(s) 383, 442, 472, 562, 1133, 1438, 1489, 1613, 1835
BstNI CCWGG 8 cut(s) 16, 55, 276, 1010, 1331, 1550, 1663, 2036
BstNSI RCATGY 2 cut(s) 313, 1000
BstPI GGTNACC 1 cut(s) 634
BstSFI CTRYAG 2 cut(s) 455, 1827
BstSLI GKGCMC 1 cut(s) 1591
BstUI CGCG 2 cut(s) 377, 587
BstV1I GCAGC 9 cut(s) 390, 505, 769, 1431, 1453, 1759, 1813, 1933, 1936
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 3 cut(s) 182, 1271, 1498
BstXI CCANNNNNNTGG 1 cut(s) 1337
BstYI RGATCY 3 cut(s) 182, 1271, 1498
BstZI CGGCCG 2 cut(s) 1407, 1995
Bsu15I ATCGAT 1 cut(s) 75
BsuI GTATCC 3 cut(s) 19, 321, 1097
BsuTUI ATCGAT 1 cut(s) 75
BtgI CCRYGG 2 cut(s) 1155, 1902
BtgZI GCGATG 1 cut(s) 1254
BtsCI GGATG 8 cut(s) 367, 477, 879, 978, 982, 1330, 1633, 1930
BtsIMutI CAGTG 3 cut(s) 213, 1215, 1314
BveI ACCTGC 1 cut(s) 1657
Cac8I GCNNGC 5 cut(s) 60, 554, 1587, 1618, 1944
CaiI CAGNNNCTG 3 cut(s) 463, 1447, 1835
CciI TCATGA 1 cut(s) 1971
CfoI GCGC 2 cut(s) 403, 1786
Cfr10I RCCGGY 5 cut(s) 661, 764, 1201, 1284, 2081
Cfr13I GGNCC 7 cut(s) 120, 193, 258, 544, 787, 1135, 1376
Cfr9I CCCGGG 4 cut(s) 388, 831, 1366, 1569
ClaI ATCGAT 1 cut(s) 75
CseI GACGC 4 cut(s) 344, 989, 1133, 1622
CspAI ACCGGT 1 cut(s) 764
DdeI CTNAG 8 cut(s) 231, 347, 356, 1207, 1743, 1779, 2005, 2091
DraIII CACNNNGTG 1 cut(s) 1144
DriI GACNNNNNGTC 1 cut(s) 1045
EaeI YGGCCR 7 cut(s) 210, 372, 534, 1318, 1407, 1734, 1995
EagI CGGCCG 2 cut(s) 1407, 1995
Eam1104I CTCTTC 6 cut(s) 815, 932, 1068, 1262, 1340, 1598
Eam1105I GACNNNNNGTC 1 cut(s) 1045
EarI CTCTTC 6 cut(s) 815, 932, 1068, 1262, 1340, 1598
EciI GGCGGA 1 cut(s) 2081
Ecl136II GAGCTC 1 cut(s) 867
EclXI CGGCCG 2 cut(s) 1407, 1995
Eco130I CCWWGG 4 cut(s) 85, 424, 1042, 1155
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 869, 921
Eco31I GGTCTC 3 cut(s) 1070, 2036, 2094
Eco47I GGWCC 4 cut(s) 120, 258, 544, 787
Eco52I CGGCCG 2 cut(s) 1407, 1995
Eco53kI GAGCTC 1 cut(s) 867
Eco57I CTGAAG 3 cut(s) 84, 1523, 1658
Eco88I CYCGRG 6 cut(s) 218, 388, 831, 1366, 1569, 1806
Eco91I GGTNACC 1 cut(s) 634
EcoICRI GAGCTC 1 cut(s) 867
EcoNI CCTNNNNNAGG 1 cut(s) 951
EcoO109I RGGNCCY 3 cut(s) 120, 193, 544
EcoO65I GGTNACC 1 cut(s) 634
EcoRII CCWGG 8 cut(s) 14, 53, 274, 1008, 1329, 1548, 1661, 2034
EcoT14I CCWWGG 4 cut(s) 85, 424, 1042, 1155
EcoT38I GRGCYC 2 cut(s) 869, 921
ErhI CCWWGG 4 cut(s) 85, 424, 1042, 1155
Esp3I CGTCTC 2 cut(s) 1568, 1846
FalI AAGNNNNNCTT 4 cut(s) 1065, 1097, 1863, 1895
FaqI GGGAC 5 cut(s) 484, 557, 800, 1727, 1823
FauI CCCGC 5 cut(s) 619, 1578, 1704, 2019, 2049
FblI GTMKAC 3 cut(s) 96, 306, 1038
FokI GGATG 8 cut(s) 374, 484, 866, 985, 989, 1337, 1640, 1937
FriOI GRGCYC 2 cut(s) 869, 921
FspBI CTAG 6 cut(s) 86, 609, 648, 719, 905, 1043
GlaI GCGC 2 cut(s) 402, 1785
GsuI CTGGAG 4 cut(s) 1645, 1721, 1808, 2057
HaeII RGCGCY 2 cut(s) 404, 1787
HgaI GACGC 4 cut(s) 344, 989, 1133, 1622
HhaI GCGC 2 cut(s) 403, 1786
Hin1I GRCGYC 3 cut(s) 1035, 1125, 1614
Hin6I GCGC 2 cut(s) 401, 1784
HinP1I GCGC 2 cut(s) 401, 1784
HincII GTYRAC 1 cut(s) 1039
HindII GTYRAC 1 cut(s) 1039
Hpy166II GTNNAC 9 cut(s) 70, 97, 243, 307, 592, 1039, 1112, 1314, 1603
Hpy188III TCNNGA 5 cut(s) 218, 1121, 1808, 1868, 1972
Hpy8I GTNNAC 9 cut(s) 70, 97, 243, 307, 592, 1039, 1112, 1314, 1603
Hpy99I CGWCG 7 cut(s) 40, 164, 272, 1037, 1040, 1127, 1616
HpyCH4III ACNGT 5 cut(s) 208, 262, 459, 634, 1109
HpyCH4IV ACGT 2 cut(s) 1035, 1310
HpyCH4V TGCA 4 cut(s) 406, 1147, 1757, 1829
HpyF10VI GCNNNNNNNGC 9 cut(s) 383, 442, 472, 562, 1133, 1438, 1489, 1613, 1835
HpyF3I CTNAG 8 cut(s) 231, 347, 356, 1207, 1743, 1779, 2005, 2091
HpySE526I ACGT 2 cut(s) 1035, 1310
Hsp92I GRCGYC 3 cut(s) 1035, 1125, 1614
HspAI GCGC 2 cut(s) 401, 1784
KpnI GGTACC 2 cut(s) 85, 771
LmnI GCTCC 6 cut(s) 423, 864, 924, 1236, 1708, 2053
Lsp1109I GCAGC 9 cut(s) 390, 505, 769, 1431, 1453, 1759, 1813, 1933, 1936
LweI GCATC 5 cut(s) 462, 1009, 1297, 1572, 1618
MaeI CTAG 6 cut(s) 86, 609, 648, 719, 905, 1043
MaeII ACGT 2 cut(s) 1035, 1310
MaeIII GTNAC 6 cut(s) 202, 483, 634, 667, 1248, 1306
MbiI CCGCTC 2 cut(s) 1711, 2056
MflI RGATCY 3 cut(s) 182, 1271, 1498
MhlI GDGCHC 3 cut(s) 869, 921, 1591
MlsI TGGCCA 2 cut(s) 212, 536
MluCI AATT 2 cut(s) 101, 2018
MluNI TGGCCA 2 cut(s) 212, 536
MlyI GAGTC 6 cut(s) 164, 1069, 1709, 1805, 1841, 1856
MmeI TCCRAC 1 cut(s) 183
Mox20I TGGCCA 2 cut(s) 212, 536
MscI TGGCCA 2 cut(s) 212, 536
MseI TTAA 1 cut(s) 1980
MslI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
Msp20I TGGCCA 2 cut(s) 212, 536
MspA1I CMGCKG 4 cut(s) 496, 760, 1444, 1750
Mva1269I GAATGC 2 cut(s) 225, 511
MvaI CCWGG 8 cut(s) 16, 55, 276, 1010, 1331, 1550, 1663, 2036
MvnI CGCG 2 cut(s) 377, 587
MwoI GCNNNNNNNGC 9 cut(s) 383, 442, 472, 562, 1133, 1438, 1489, 1613, 1835
NcoI CCATGG 1 cut(s) 1155
NlaIV GGNNCC 9 cut(s) 83, 121, 195, 452, 545, 769, 788, 920, 2080
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 202, 483, 634, 1306
NspI RCATGY 2 cut(s) 313, 1000
PagI TCATGA 1 cut(s) 1971
PaqCI CACCTGC 1 cut(s) 1657
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 5 cut(s) 35, 296, 1055, 1113, 1617
PctI GAATGC 2 cut(s) 225, 511
PfeI GAWTC 5 cut(s) 5, 379, 412, 1555, 1574
PfoI TCCNGGA 1 cut(s) 2034
PinAI ACCGGT 1 cut(s) 764
Ple19I CGATCG 2 cut(s) 79, 303
PleI GAGTC 6 cut(s) 163, 1068, 1709, 1805, 1840, 1856
PpsI GAGTC 6 cut(s) 163, 1068, 1709, 1805, 1840, 1856
PpuMI RGGWCCY 2 cut(s) 120, 544
Psp124BI GAGCTC 1 cut(s) 869
Psp5II RGGWCCY 2 cut(s) 120, 544
Psp6I CCWGG 8 cut(s) 14, 53, 274, 1008, 1329, 1548, 1661, 2034
PspEI GGTNACC 1 cut(s) 634
PspGI CCWGG 8 cut(s) 14, 53, 274, 1008, 1329, 1548, 1661, 2034
PspN4I GGNNCC 9 cut(s) 83, 121, 195, 452, 545, 769, 788, 920, 2080
PspPI GGNCC 7 cut(s) 120, 193, 258, 544, 787, 1135, 1376
PspPPI RGGWCCY 2 cut(s) 120, 544
PstI CTGCAG 1 cut(s) 1831
PstNI CAGNNNCTG 3 cut(s) 463, 1447, 1835
PsuI RGATCY 3 cut(s) 182, 1271, 1498
PvuI CGATCG 2 cut(s) 79, 303
PvuII CAGCTG 3 cut(s) 496, 760, 1444
RseI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
SacI GAGCTC 1 cut(s) 869
SalI GTCGAC 1 cut(s) 1037
SaqAI TTAA 1 cut(s) 1980
Sau96I GGNCC 7 cut(s) 120, 193, 258, 544, 787, 1135, 1376
SchI GAGTC 6 cut(s) 164, 1069, 1709, 1805, 1841, 1856
SduI GDGCHC 3 cut(s) 869, 921, 1591
SfaNI GCATC 5 cut(s) 462, 1009, 1297, 1572, 1618
SfcI CTRYAG 2 cut(s) 455, 1827
SinI GGWCC 4 cut(s) 120, 258, 544, 787
SmaI CCCGGG 4 cut(s) 390, 833, 1368, 1571
SmiMI CAYNNNNRTG 3 cut(s) 290, 1001, 1187
SmlI CTYRAG 1 cut(s) 1763
SmoI CTYRAG 1 cut(s) 1763
Sse9I AATT 2 cut(s) 101, 2018
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 6 cut(s) 86, 609, 648, 719, 905, 1043
SstI GAGCTC 1 cut(s) 869
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 4 cut(s) 85, 424, 1042, 1155
TaaI ACNGT 5 cut(s) 208, 262, 459, 634, 1109
TaiI ACGT 2 cut(s) 1038, 1313
TaqII GACCGA 1 cut(s) 1053
TasI AATT 2 cut(s) 101, 2018
TatI WGTACW 2 cut(s) 603, 1911
TauI GCSGC 5 cut(s) 377, 647, 1739, 1997, 2066
TfiI GAWTC 5 cut(s) 5, 379, 412, 1555, 1574
Tru1I TTAA 1 cut(s) 1980
Tru9I TTAA 1 cut(s) 1980
TscAI CASTG 3 cut(s) 213, 1215, 1321
TseFI GTSAC 4 cut(s) 202, 483, 634, 1306
TseI GCWGC 9 cut(s) 403, 493, 757, 1441, 1444, 1747, 1826, 1946, 1949
Tsp45I GTSAC 4 cut(s) 202, 483, 634, 1306
TspDTI ATGAA 6 cut(s) 308, 868, 1467, 1485, 1670, 1988
TspGWI ACGGA 1 cut(s) 484
TspMI CCCGGG 4 cut(s) 388, 831, 1366, 1569
TspRI CASTG 3 cut(s) 213, 1215, 1321
VpaK11BI GGWCC 4 cut(s) 120, 258, 544, 787
XagI CCTNNNNNAGG 1 cut(s) 951
XapI RAATTY 1 cut(s) 2018
XceI RCATGY 2 cut(s) 313, 1000
XmaI CCCGGG 4 cut(s) 388, 831, 1366, 1569
XmaJI CCTAGG 2 cut(s) 85, 1042
XmiI GTMKAC 3 cut(s) 96, 306, 1038
XspI CTAG 6 cut(s) 86, 609, 648, 719, 905, 1043
ZraI GACGTC 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.