Rmu_sc0027778.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027778.1
OG0000087
Physical Location & Seq
Forward (+)
5340 .. 7681
2342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0027778.1_g000002.1.cds

Sequence Viewer

Length: 1806 bp
atggaatcagaaaccaaggctagggatgcaggatcatcatatcaatcttccgtgagacaagcggaagcagatattgaccggtacctggctcacagtagtacccgtgtggagttagaagagaacaccggatcttcgactggggtgttctcggagagtagcgagggtaccgacggggatgagagcgaggacgatcctggggaggcgcaagtagtcatggtggctattcccgagggcatccctaaacctagatatacgctagtggacgggaccgtgtgcaatgatcccgggagaagtatgaccatgaaagagatcatcacgatgagattgaagtggggaataccggacaaagtagaacttaggcctctaaaggctggagagatggctgtgaatcctcctccgggatgggtggcgctgcacgagaaccagctccaccaagggctatctttaccacaaccccagtgcctacagtatctcctgcggatgctaaacctgtcaccggggcagaaacagtcttgtcaaggtaccgtgacgttcgtcaccctagactatgagcccctagttaccgatatgcctacttctcagagcaagaggtggaggaataaagtgtttcttgctggaggacattggcagattaggaataagaaatggcacctaacggtgaaagtgccgaagcggaaacctcggaaaggtaaggaggacgacaagatgaatgacaacaagctgatggatatgctcatgagccaaggagaggatgctctgcatattgaagttgacctggggtcgaaggcaatgggtcgctcaattgaggagtttctcctcgagattcatgataaagggtacgggaaccctgatcttgacgcccccgttactcagagtgagcagcccactgccagggacggggttaccattgctgatcccgggaggggaaaggcaccagtgtctggctctgtctcttcaagttccgctgggtcagctggaagggaagaggtcctgcttccgggtgagaagaagaggttccataggcacggtcatcggagtggggataaggaggaggttacttacaccggtcgagatgttacagggacggtgcccaagaggcagaagaaaagtcatccgggactagagctggtgtcgtcacttggtatgttatctccaacggtacaactagtccccaaaaagcccataaagcaactgttgagtgactacgaggttgctgatgagaagttcatgtgctctatgctcatagatttgaaagatatagacctcgaccgggtacgggcgaaggacaaccccccacaaaagaatcgtcgtctcgctcgagaatcaatgatgcgggaggaggttagcaacctctccgggcaagtgaagtatcttcatggggagaagtcaaagcgggagaaggagcgggactccttgaagatgaaggtagactccttgaatcccaaggtagccgagctggaggcggcgaagacgaggatggcggagcttgaggaagctgatgaatctgccaagtcatggagggagaaagcagtgcatctggaagagtgccttccccttgaaaggcgggaggccgtttccgagtacaaaggctcccaagagcttcttaatatgatactcgccgctcaagacaaggccgtgatcatgaagtacaaggagtgggtggcatctaggtacctggatgaggctaaattcaggcgggcacttctcgagaagaagaagaaggaacaggaggtcaagggggaagaacaaggaaaccagggttccagaaccgagggagggtcaagtggtggtcaccctgatgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

601

Amino Acids

67.13

Weight (kDa)

6.45

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 4 cut(s) 81, 164, 521, 1671
AccB1I GGYRCC 7 cut(s) 81, 164, 521, 648, 931, 1087, 1671
AccB7I CCANNNNNTGG 2 cut(s) 941, 1515
AccBSI CCGCTC 2 cut(s) 1405, 1622
AccI GTMKAC 1 cut(s) 1428
AclWI GGATC 5 cut(s) 40, 136, 185, 275, 908
AcsI RAATTY 1 cut(s) 1688
AcyI GRCGYC 1 cut(s) 858
AgeI ACCGGT 2 cut(s) 78, 1064
AgsI TTSAA 7 cut(s) 328, 767, 957, 1252, 1417, 1438, 1559
AhdI GACNNNNNGTC 1 cut(s) 778
AhlI ACTAGT 1 cut(s) 1165
AjnI CCWGG 6 cut(s) 84, 193, 774, 890, 1674, 1755
AluBI AGCT 8 cut(s) 427, 721, 974, 1126, 1456, 1486, 1496, 1600
AluI AGCT 8 cut(s) 427, 721, 974, 1126, 1456, 1486, 1496, 1600
Alw21I GWGCWC 1 cut(s) 1235
Alw26I GTCTC 3 cut(s) 49, 955, 1316
AlwI GGATC 5 cut(s) 40, 136, 185, 275, 908
AlwNI CAGNNNCTG 1 cut(s) 941
Ama87I CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
AoxI GGCC 3 cut(s) 359, 1569, 1632
ApeKI GCWGC 2 cut(s) 412, 880
ApoI RAATTY 1 cut(s) 1688
ArsI GACNNNNNNTTYG 2 cut(s) 1291, 1323
AsiGI ACCGGT 2 cut(s) 78, 1064
Asp700I GAANNNNTTC 1 cut(s) 1013
Asp718I GGTACC 4 cut(s) 81, 164, 521, 1671
AspLEI GCGC 2 cut(s) 205, 412
AspS9I GGNCC 2 cut(s) 267, 988
AsuHPI GGTGA 5 cut(s) 486, 529, 670, 1013, 1784
AvaI CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
AvaII GGWCC 2 cut(s) 267, 988
BaeGI GKGCMC 2 cut(s) 1092, 1702
BaeI ACNNNNGTAYC 2 cut(s) 82, 115
BanI GGYRCC 7 cut(s) 81, 164, 521, 648, 931, 1087, 1671
BanII GRGCYC 1 cut(s) 555
BauI CACGAG 1 cut(s) 416
BbsI GAAGAC 1 cut(s) 1475
Bbv12I GWGCWC 1 cut(s) 1235
BbvI GCAGC 2 cut(s) 399, 892
BccI CCATC 4 cut(s) 373, 396, 718, 1471
BceAI ACGGC 2 cut(s) 1556, 1619
BcgI CGANNNNNNTGC 2 cut(s) 1013, 1047
BciT130I CCWGG 6 cut(s) 86, 195, 776, 892, 1676, 1757
BclI TGATCA 1 cut(s) 1638
BcoDI GTCTC 3 cut(s) 49, 955, 1316
BcuI ACTAGT 1 cut(s) 1165
BfaI CTAG 8 cut(s) 21, 246, 257, 542, 557, 1121, 1166, 1668
BfmI CTRYAG 1 cut(s) 464
BfoI RGCGCY 1 cut(s) 413
BglI GCCNNNNNGGC 1 cut(s) 1096
BisI GCNGC 4 cut(s) 413, 881, 1464, 1620
BlsI GCNGC 4 cut(s) 414, 882, 1465, 1621
Bme18I GGWCC 2 cut(s) 267, 988
BmeRI GACNNNNNGTC 1 cut(s) 778
BmeT110I CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
BmgT120I GGNCC 2 cut(s) 267, 988
BmrI ACTGGG 2 cut(s) 147, 451
BmsI GCATC 7 cut(s) 16, 243, 471, 742, 1320, 1543, 1673
BmuI ACTGGG 2 cut(s) 147, 451
BoxI GACNNNNGTC 1 cut(s) 533
BpiI GAAGAC 1 cut(s) 1475
BplI GAGNNNNNCTC 2 cut(s) 1394, 1426
BpmI CTGGAG 3 cut(s) 393, 636, 1478
BpuEI CTTGAG 2 cut(s) 1508, 1608
BsaHI GRCGYC 1 cut(s) 858
BsaWI WCCGGW 4 cut(s) 78, 125, 340, 1064
BsaXI ACNNNNNCTCC 4 cut(s) 456, 486, 1574, 1604
Bse118I RCCGGY 2 cut(s) 78, 1064
Bse1I ACTGG 3 cut(s) 142, 457, 935
Bse3DI GCAATG 3 cut(s) 283, 795, 906
BseBI CCWGG 6 cut(s) 86, 195, 776, 892, 1676, 1757
BseGI GGATG 9 cut(s) 31, 181, 234, 407, 486, 757, 1111, 1482, 1684
BseMI GCAATG 3 cut(s) 283, 795, 906
BseMII CTCAG 2 cut(s) 593, 884
BseNI ACTGG 3 cut(s) 142, 457, 935
BseRI GAGGAG 5 cut(s) 384, 806, 821, 1064, 1352
BseSI GKGCMC 2 cut(s) 1092, 1702
BseXI GCAGC 2 cut(s) 399, 892
BseYI CCCAGC 1 cut(s) 965
BsgI GTGCAG 1 cut(s) 398
Bsh1285I CGRYCG 2 cut(s) 1069, 1270
BshFI GGCC 3 cut(s) 361, 1571, 1634
BshNI GGYRCC 7 cut(s) 81, 164, 521, 648, 931, 1087, 1671
BshTI ACCGGT 2 cut(s) 78, 1064
BsiEI CGRYCG 2 cut(s) 1069, 1270
BsiHKAI GWGCWC 1 cut(s) 1235
BsiHKCI CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
BslFI GGGAC 6 cut(s) 280, 908, 1096, 1131, 1154, 1421
BsmAI GTCTC 3 cut(s) 49, 955, 1316
BsmBI CGTCTC 1 cut(s) 1316
BsmFI GGGAC 6 cut(s) 280, 908, 1096, 1131, 1154, 1421
BsnI GGCC 3 cut(s) 361, 1571, 1634
BsoBI CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
Bsp1286I GDGCHC 4 cut(s) 555, 1092, 1235, 1702
Bsp143I GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
BspANI GGCC 3 cut(s) 361, 1571, 1634
BspCNI CTCAG 2 cut(s) 592, 883
BspHI TCATGA 3 cut(s) 735, 826, 1641
BspPI GGATC 5 cut(s) 40, 136, 185, 275, 908
BspT107I GGYRCC 7 cut(s) 81, 164, 521, 648, 931, 1087, 1671
BsrBI CCGCTC 2 cut(s) 1405, 1622
BsrDI GCAATG 3 cut(s) 283, 795, 906
BsrFI RCCGGY 2 cut(s) 78, 1064
BsrI ACTGG 3 cut(s) 142, 457, 935
BssAI RCCGGY 2 cut(s) 78, 1064
BssMI GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
BssNI GRCGYC 1 cut(s) 858
BssSI CACGAG 1 cut(s) 416
BssT1I CCWWGG 4 cut(s) 15, 433, 742, 1443
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 6 cut(s) 86, 195, 776, 892, 1676, 1757
Bst6I CTCTTC 5 cut(s) 111, 958, 978, 1004, 1536
BstACI GRCGYC 1 cut(s) 858
BstC8I GCNNGC 1 cut(s) 1698
BstDEI CTNAG 3 cut(s) 356, 579, 870
BstEII GGTNACC 2 cut(s) 901, 1790
BstENI CCTNNNNNAGG 2 cut(s) 684, 1679
BstF5I GGATG 9 cut(s) 31, 181, 234, 407, 486, 757, 1111, 1482, 1684
BstH2I RGCGCY 1 cut(s) 413
BstHHI GCGC 2 cut(s) 205, 412
BstKTI GATC 8 cut(s) 35, 131, 193, 283, 312, 853, 916, 1641
BstMAI GTCTC 3 cut(s) 49, 955, 1316
BstMBI GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
BstMCI CGRYCG 2 cut(s) 1069, 1270
BstMWI GCNNNNNNNGC 4 cut(s) 26, 971, 1096, 1186
BstNI CCWGG 6 cut(s) 86, 195, 776, 892, 1676, 1757
BstPAI GACNNNNGTC 1 cut(s) 533
BstPI GGTNACC 2 cut(s) 901, 1790
BstSFI CTRYAG 1 cut(s) 464
BstSLI GKGCMC 2 cut(s) 1092, 1702
BstV1I GCAGC 2 cut(s) 399, 892
BstV2I GAAGAC 1 cut(s) 1475
BstX2I RGATCY 1 cut(s) 128
BstYI RGATCY 1 cut(s) 128
BsuRI GGCC 3 cut(s) 361, 1571, 1634
BtsCI GGATG 9 cut(s) 31, 181, 234, 407, 486, 757, 1111, 1482, 1684
BtsI GCAGTG 2 cut(s) 885, 1536
BtsIMutI CAGTG 4 cut(s) 464, 885, 942, 1536
Cac8I GCNNGC 1 cut(s) 1698
CaiI CAGNNNCTG 1 cut(s) 941
CciI TCATGA 3 cut(s) 735, 826, 1641
CfoI GCGC 2 cut(s) 205, 412
Cfr10I RCCGGY 2 cut(s) 78, 1064
Cfr13I GGNCC 2 cut(s) 267, 988
Cfr9I CCCGGG 2 cut(s) 284, 917
CseI GACGC 1 cut(s) 866
CspAI ACCGGT 2 cut(s) 78, 1064
CviAII CATG 8 cut(s) 214, 301, 736, 827, 1228, 1376, 1515, 1642
DdeI CTNAG 3 cut(s) 356, 579, 870
DpnI GATC 8 cut(s) 34, 130, 192, 282, 311, 852, 915, 1640
DpnII GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
DriI GACNNNNNGTC 1 cut(s) 778
Eam1104I CTCTTC 5 cut(s) 111, 958, 978, 1004, 1536
Eam1105I GACNNNNNGTC 1 cut(s) 778
EarI CTCTTC 5 cut(s) 111, 958, 978, 1004, 1536
EciI GGCGGA 1 cut(s) 1496
Eco130I CCWWGG 4 cut(s) 15, 433, 742, 1443
Eco147I AGGCCT 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 555
Eco47I GGWCC 2 cut(s) 267, 988
Eco88I CYCGRG 6 cut(s) 227, 284, 818, 917, 1317, 1706
Eco91I GGTNACC 2 cut(s) 901, 1790
EcoNI CCTNNNNNAGG 2 cut(s) 684, 1679
EcoO109I RGGNCCY 1 cut(s) 988
EcoO65I GGTNACC 2 cut(s) 901, 1790
EcoRII CCWGG 6 cut(s) 84, 193, 774, 890, 1674, 1755
EcoT14I CCWWGG 4 cut(s) 15, 433, 742, 1443
EcoT38I GRGCYC 1 cut(s) 555
ErhI CCWWGG 4 cut(s) 15, 433, 742, 1443
Esp3I CGTCTC 1 cut(s) 1316
FaeI CATG 8 cut(s) 217, 304, 739, 830, 1231, 1379, 1518, 1645
FalI AAGNNNNNCTT 8 cut(s) 339, 371, 594, 626, 1533, 1565, 1587, 1619
FaqI GGGAC 6 cut(s) 280, 908, 1096, 1131, 1154, 1421
FatI CATG 8 cut(s) 213, 300, 735, 826, 1227, 1375, 1514, 1641
FauI CCCGC 5 cut(s) 1326, 1386, 1398, 1557, 1689
FbaI TGATCA 1 cut(s) 1638
FblI GTMKAC 1 cut(s) 1428
Fnu4HI GCNGC 4 cut(s) 413, 881, 1464, 1620
FokI GGATG 9 cut(s) 38, 188, 221, 414, 493, 764, 1098, 1489, 1691
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 4 cut(s) 413, 881, 1464, 1620
FspBI CTAG 8 cut(s) 21, 246, 257, 542, 557, 1121, 1166, 1668
GlaI GCGC 2 cut(s) 204, 411
GluI GCNGC 4 cut(s) 413, 881, 1464, 1620
GsaI CCCAGC 1 cut(s) 969
GsuI CTGGAG 3 cut(s) 393, 636, 1478
HaeII RGCGCY 1 cut(s) 413
HaeIII GGCC 3 cut(s) 361, 1571, 1634
HgaI GACGC 1 cut(s) 866
HhaI GCGC 2 cut(s) 205, 412
Hin1I GRCGYC 1 cut(s) 858
Hin1II CATG 8 cut(s) 217, 304, 739, 830, 1231, 1379, 1518, 1645
Hin6I GCGC 2 cut(s) 203, 410
HinP1I GCGC 2 cut(s) 203, 410
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HinfI GANTC 9 cut(s) 5, 388, 823, 1303, 1322, 1409, 1430, 1438, 1502
HphI GGTGA 5 cut(s) 486, 529, 670, 1013, 1784
Hpy166II GTNNAC 3 cut(s) 262, 772, 1429
Hpy188I TCNGA 7 cut(s) 10, 151, 582, 684, 873, 1035, 1579
Hpy8I GTNNAC 3 cut(s) 262, 772, 1429
Hpy99I CGWCG 2 cut(s) 173, 1311
HpyAV CCTTC 7 cut(s) 778, 972, 1276, 1393, 1417, 1559, 1714
HpyCH4IV ACGT 1 cut(s) 530
HpyCH4V TGCA 5 cut(s) 29, 276, 415, 760, 1534
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 971, 1096, 1186
HpyF3I CTNAG 3 cut(s) 356, 579, 870
HpySE526I ACGT 1 cut(s) 530
Hsp92I GRCGYC 1 cut(s) 858
Hsp92II CATG 8 cut(s) 217, 304, 739, 830, 1231, 1379, 1518, 1645
HspAI GCGC 2 cut(s) 203, 410
KpnI GGTACC 4 cut(s) 85, 168, 525, 1675
Ksp22I TGATCA 1 cut(s) 1638
Kzo9I GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
LmnI GCTCC 4 cut(s) 432, 1402, 1483, 1595
Lsp1109I GCAGC 2 cut(s) 399, 892
LweI GCATC 7 cut(s) 16, 243, 471, 742, 1320, 1543, 1673
MaeI CTAG 8 cut(s) 21, 246, 257, 542, 557, 1121, 1166, 1668
MaeII ACGT 1 cut(s) 530
MalI GATC 8 cut(s) 34, 130, 192, 282, 311, 852, 915, 1640
MbiI CCGCTC 2 cut(s) 1405, 1622
MboI GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
MfeI CAATTG 1 cut(s) 801
MflI RGATCY 1 cut(s) 128
MhlI GDGCHC 4 cut(s) 555, 1092, 1235, 1702
MluCI AATT 2 cut(s) 801, 1688
MlyI GAGTC 2 cut(s) 1403, 1424
MmeI TCCRAC 1 cut(s) 1178
MroXI GAANNNNTTC 1 cut(s) 1013
MseI TTAA 1 cut(s) 1605
MslI CAYNNNNRTG 3 cut(s) 317, 1035, 1797
MspA1I CMGCKG 2 cut(s) 965, 974
MunI CAATTG 1 cut(s) 801
MvaI CCWGG 6 cut(s) 86, 195, 776, 892, 1676, 1757
MwoI GCNNNNNNNGC 4 cut(s) 26, 971, 1096, 1186
NdeII GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
NlaIII CATG 8 cut(s) 217, 304, 739, 830, 1231, 1379, 1518, 1645
NmeAIII GCCGAG 1 cut(s) 1477
NmuCI GTSAC 6 cut(s) 492, 526, 535, 1134, 1199, 1790
PaeR7I CTCGAG 3 cut(s) 818, 1317, 1706
PagI TCATGA 3 cut(s) 735, 826, 1641
PceI AGGCCT 1 cut(s) 361
PcsI WCGNNNNNNNCGW 1 cut(s) 1315
PdmI GAANNNNTTC 1 cut(s) 1013
PfeI GAWTC 7 cut(s) 5, 388, 823, 1303, 1322, 1438, 1502
PflMI CCANNNNNTGG 2 cut(s) 941, 1515
PfoI TCCNGGA 2 cut(s) 397, 1114
PinAI ACCGGT 2 cut(s) 78, 1064
PkrI GCNGC 4 cut(s) 414, 882, 1465, 1621
PleI GAGTC 2 cut(s) 1403, 1424
PpsI GAGTC 2 cut(s) 1403, 1424
PpuMI RGGWCCY 1 cut(s) 988
PshAI GACNNNNGTC 1 cut(s) 533
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 6 cut(s) 84, 193, 774, 890, 1674, 1755
PspEI GGTNACC 2 cut(s) 901, 1790
PspFI CCCAGC 1 cut(s) 965
PspGI CCWGG 6 cut(s) 84, 193, 774, 890, 1674, 1755
PspPI GGNCC 2 cut(s) 267, 988
PspPPI RGGWCCY 1 cut(s) 988
PstNI CAGNNNCTG 1 cut(s) 941
PsuI RGATCY 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 974
RseI CAYNNNNRTG 3 cut(s) 317, 1035, 1797
SaqAI TTAA 1 cut(s) 1605
SatI GCNGC 4 cut(s) 413, 881, 1464, 1620
Sau3AI GATC 8 cut(s) 32, 128, 190, 280, 309, 850, 913, 1638
Sau96I GGNCC 2 cut(s) 267, 988
SchI GAGTC 2 cut(s) 1403, 1424
SduI GDGCHC 4 cut(s) 555, 1092, 1235, 1702
SfaNI GCATC 7 cut(s) 16, 243, 471, 742, 1320, 1543, 1673
SfcI CTRYAG 1 cut(s) 464
Sfr274I CTCGAG 3 cut(s) 818, 1317, 1706
SinI GGWCC 2 cut(s) 267, 988
SlaI CTCGAG 3 cut(s) 818, 1317, 1706
SmaI CCCGGG 2 cut(s) 286, 919
SmiMI CAYNNNNRTG 3 cut(s) 317, 1035, 1797
SmlI CTYRAG 5 cut(s) 818, 1317, 1487, 1623, 1706
SmoI CTYRAG 5 cut(s) 818, 1317, 1487, 1623, 1706
SpeI ACTAGT 1 cut(s) 1165
Sse9I AATT 2 cut(s) 801, 1688
SseBI AGGCCT 1 cut(s) 361
SspMI CTAG 8 cut(s) 21, 246, 257, 542, 557, 1121, 1166, 1668
StuI AGGCCT 1 cut(s) 361
StyI CCWWGG 4 cut(s) 15, 433, 742, 1443
TaiI ACGT 1 cut(s) 533
TaqI TCGA 7 cut(s) 134, 782, 819, 1069, 1266, 1318, 1707
TasI AATT 2 cut(s) 801, 1688
TatI WGTACW 2 cut(s) 1581, 1647
TauI GCSGC 2 cut(s) 1466, 1622
TfiI GAWTC 7 cut(s) 5, 388, 823, 1303, 1322, 1438, 1502
Tru1I TTAA 1 cut(s) 1605
Tru9I TTAA 1 cut(s) 1605
TscAI CASTG 4 cut(s) 464, 892, 942, 1536
TseFI GTSAC 6 cut(s) 492, 526, 535, 1134, 1199, 1790
TseI GCWGC 2 cut(s) 412, 880
Tsp45I GTSAC 6 cut(s) 492, 526, 535, 1134, 1199, 1790
TspDTI ATGAA 8 cut(s) 317, 722, 815, 1216, 1364, 1436, 1515, 1658
TspGWI ACGGA 1 cut(s) 40
TspMI CCCGGG 2 cut(s) 284, 917
TspRI CASTG 4 cut(s) 464, 892, 942, 1536
Van91I CCANNNNNTGG 2 cut(s) 941, 1515
VpaK11BI GGWCC 2 cut(s) 267, 988
XagI CCTNNNNNAGG 2 cut(s) 684, 1679
XapI RAATTY 1 cut(s) 1688
XhoI CTCGAG 3 cut(s) 818, 1317, 1706
XmaI CCCGGG 2 cut(s) 284, 917
XmiI GTMKAC 1 cut(s) 1428
XmnI GAANNNNTTC 1 cut(s) 1013
XspI CTAG 8 cut(s) 21, 246, 257, 542, 557, 1121, 1166, 1668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.