Rmu_sc0002868.1_g000015

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002868.1
OG0000087
Physical Location & Seq
Forward (+)
41648 .. 45454
3807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002868.1_g000015.1.cds

Sequence Viewer

Length: 1818 bp
atgggttttgggatgaatttctgggttttggataggctaacccttgtgcttctggttccagatatagcaagatttgaggtccccggtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcatcgtaccagtcttctgccaggcaagctaaagtggatatcgaccggtacttaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctccgagagtagtgaggagtccgacgagggtgagagcgagggtggatccgaggaggccccggtagtcacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggaccgtatgcgacgaacctgggagaagcatgacgatgaaggagatcgtagacatgcgactgaagtgggggataccggacacagtggagcttagacctcttagggatggggagatggccgcgaatcctgccctggggtgggtggcgctacacgagaatcagctccaccaaggtatgatggccatgtgggacttgtgccagcaagggtggccttccataaatgagttccgcgcgatagcccgggtatatgtcgtgtggtcagagaaagagaggagctcttataggttcatctggcactctatactttataggctagggttagggtggctccccgtgaaagccctgaagaggaaaccccagaaaggcaaggaggaggataggatggatgatgcccaactgatggacatgctgatgggccagggagaagatgctctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtctattgaagagacccttttggagatcaccgatgagggatacggtgagcctgaccccgacgctcccgtgacccacgccgcgcagccctccatggccgatgtcattacgatagatgacaccggaatgggaaaagtaccggcctcagtgcctatttcctctcgctccactgggagcgatgaggcgttactccctggtgagaagaagagatcccacatgcaccgacatcgaactgataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagaccacccgagatcagggccgtcgcattctcttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagttgctgaatgaatacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatattgacctcgaccaggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggaggaagtaaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagaccatctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctcgatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagtgggaggcggcggccaagtcaggtaccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

605

Amino Acids

67.1

Weight (kDa)

5.15

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1357
AatII GACGTC 1 cut(s) 801
Acc36I ACCTGC 1 cut(s) 1357
Acc65I GGTACC 2 cut(s) 86, 1778
AccB1I GGYRCC 2 cut(s) 86, 1778
AccB7I CCANNNNNTGG 1 cut(s) 754
AccBSI CCGCTC 1 cut(s) 1411
AccI GTMKAC 3 cut(s) 195, 405, 801
AccII CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
AclWI GGATC 6 cut(s) 139, 276, 289, 1029, 1269, 1581
AcoI YGGCCR 8 cut(s) 309, 471, 534, 921, 1081, 1434, 1695, 1767
AcsI RAATTY 2 cut(s) 16, 1718
AcuI CTGAAG 4 cut(s) 437, 719, 1286, 1358
AcyI GRCGYC 2 cut(s) 798, 1314
AgeI ACCGGT 2 cut(s) 177, 1781
AgsI TTSAA 2 cut(s) 836, 1297
AhdI GACNNNNNGTC 1 cut(s) 808
AjnI CCWGG 9 cut(s) 113, 152, 373, 486, 771, 1018, 1092, 1284, 1734
AloI GAACNNNNNNTCC 2 cut(s) 203, 235
AluBI AGCT 7 cut(s) 161, 445, 517, 630, 1399, 1462, 1630
AluI AGCT 7 cut(s) 161, 445, 517, 630, 1399, 1462, 1630
Alw21I GWGCWC 1 cut(s) 632
Alw26I GTCTC 4 cut(s) 833, 1546, 1736, 1794
AlwI GGATC 6 cut(s) 139, 276, 289, 1029, 1269, 1581
AlwNI CAGNNNCTG 2 cut(s) 1210, 1535
Ama87I CYCGRG 4 cut(s) 317, 594, 1129, 1506
ApeKI GCWGC 5 cut(s) 910, 1447, 1526, 1646, 1649
ApoI RAATTY 2 cut(s) 16, 1718
AsiGI ACCGGT 2 cut(s) 177, 1781
Asp718I GGTACC 2 cut(s) 86, 1778
AspA2I CCTAGG 1 cut(s) 805
AspLEI GCGC 4 cut(s) 502, 587, 910, 1486
AspS9I GGNCC 7 cut(s) 79, 219, 292, 357, 769, 1139, 1248
AsuHPI GGTGA 7 cut(s) 278, 847, 884, 1034, 1081, 1381, 1481
AvaI CYCGRG 4 cut(s) 317, 594, 1129, 1506
AvaII GGWCC 4 cut(s) 79, 219, 357, 1248
AvrII CCTAGG 1 cut(s) 805
BaeI ACNNNNGTAYC 2 cut(s) 78, 111
BalI TGGCCA 2 cut(s) 311, 536
BamHI GGATCC 1 cut(s) 281
BanI GGYRCC 2 cut(s) 86, 1778
BanII GRGCYC 1 cut(s) 632
BarI GAAGNNNNNNTAC 2 cut(s) 323, 355
BauI CACGAG 3 cut(s) 506, 820, 1595
BbsI GAAGAC 1 cut(s) 138
Bbv12I GWGCWC 1 cut(s) 632
BbvCI CCTCAGC 1 cut(s) 1479
BbvI GCAGC 5 cut(s) 922, 1459, 1513, 1633, 1636
BceAI ACGGC 4 cut(s) 1126, 1157, 1523, 1586
BcgI CGANNNNNNTGC 2 cut(s) 1034, 1068
BciT130I CCWGG 9 cut(s) 115, 154, 375, 488, 773, 1020, 1094, 1286, 1736
BciVI GTATCC 3 cut(s) 118, 420, 860
BcoDI GTCTC 4 cut(s) 833, 1546, 1736, 1794
BfaI CTAG 2 cut(s) 668, 806
BfmI CTRYAG 1 cut(s) 1527
BfoI RGCGCY 1 cut(s) 503
BfuAI ACCTGC 1 cut(s) 1357
BfuI GTATCC 3 cut(s) 118, 420, 860
BlnI CCTAGG 1 cut(s) 805
Bme18I GGWCC 4 cut(s) 79, 219, 357, 1248
BmeRI GACNNNNNGTC 1 cut(s) 808
BmeT110I CYCGRG 4 cut(s) 317, 594, 1129, 1506
BmgT120I GGNCC 7 cut(s) 79, 219, 292, 357, 769, 1139, 1248
BmiI GGNNCC 9 cut(s) 57, 81, 88, 220, 283, 294, 358, 683, 1780
BmrI ACTGGG 2 cut(s) 237, 1005
BmsI GCATC 3 cut(s) 733, 772, 1629
BmuI ACTGGG 2 cut(s) 237, 1005
BpiI GAAGAC 1 cut(s) 138
BplI GAGNNNNNCTC 6 cut(s) 614, 646, 1400, 1432, 1619, 1651
BpmI CTGGAG 3 cut(s) 1421, 1589, 1757
Bpu10I CCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 1 cut(s) 1484
BsaBI GATNNNNATC 2 cut(s) 1332, 1806
BsaHI GRCGYC 2 cut(s) 798, 1314
BsaI GGTCTC 3 cut(s) 833, 1736, 1794
BsaWI WCCGGW 5 cut(s) 177, 430, 947, 1177, 1781
BsaXI ACNNNNNCTCC 4 cut(s) 1058, 1088, 1601, 1631
Bse118I RCCGGY 3 cut(s) 177, 964, 1781
Bse1I ACTGG 5 cut(s) 142, 232, 1000, 1084, 1105
Bse8I GATNNNNATC 2 cut(s) 1332, 1806
BseBI CCWGG 9 cut(s) 115, 154, 375, 488, 773, 1020, 1094, 1286, 1736
BseGI GGATG 7 cut(s) 18, 105, 466, 741, 745, 1093, 1630
BseJI GATNNNNATC 2 cut(s) 1332, 1806
BseMII CTCAG 4 cut(s) 984, 1419, 1470, 1805
BseNI ACTGG 5 cut(s) 142, 232, 1000, 1084, 1105
BseRI GAGGAG 6 cut(s) 266, 302, 640, 740, 1358, 1622
BseX3I CGGCCG 1 cut(s) 1695
BseXI GCAGC 5 cut(s) 922, 1459, 1513, 1633, 1636
BsgI GTGCAG 1 cut(s) 773
Bsh1236I CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
Bsh1285I CGRYCG 2 cut(s) 178, 1698
BshNI GGYRCC 2 cut(s) 86, 1778
BshTI ACCGGT 2 cut(s) 177, 1781
BsiEI CGRYCG 2 cut(s) 178, 1698
BsiHKAI GWGCWC 1 cut(s) 632
BsiHKCI CYCGRG 4 cut(s) 317, 594, 1129, 1506
BslFI GGGAC 5 cut(s) 65, 370, 557, 1427, 1523
BsmAI GTCTC 4 cut(s) 833, 1546, 1736, 1794
BsmBI CGTCTC 1 cut(s) 1546
BsmFI GGGAC 5 cut(s) 65, 370, 557, 1427, 1523
BsmI GAATGC 2 cut(s) 324, 1147
Bso31I GGTCTC 3 cut(s) 833, 1736, 1794
BsoBI CYCGRG 4 cut(s) 317, 594, 1129, 1506
Bsp1286I GDGCHC 1 cut(s) 632
Bsp143I GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
Bsp19I CCATGG 1 cut(s) 918
BspCNI CTCAG 4 cut(s) 983, 1420, 1471, 1804
BspFNI CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
BspHI TCATGA 1 cut(s) 1671
BspLI GGNNCC 9 cut(s) 57, 81, 88, 220, 283, 294, 358, 683, 1780
BspMAI CTGCAG 1 cut(s) 1531
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 6 cut(s) 139, 276, 289, 1029, 1269, 1581
BspT107I GGYRCC 2 cut(s) 86, 1778
BspTNI GGTCTC 3 cut(s) 833, 1736, 1794
BsrBI CCGCTC 1 cut(s) 1411
BsrFI RCCGGY 3 cut(s) 177, 964, 1781
BsrI ACTGG 5 cut(s) 142, 232, 1000, 1084, 1105
BssAI RCCGGY 3 cut(s) 177, 964, 1781
BssMI GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
BssNI GRCGYC 2 cut(s) 798, 1314
BssSI CACGAG 3 cut(s) 506, 820, 1595
BssT1I CCWWGG 3 cut(s) 523, 805, 918
Bst2BI CACGAG 3 cut(s) 506, 820, 1595
Bst2UI CCWGG 9 cut(s) 115, 154, 375, 488, 773, 1020, 1094, 1286, 1736
Bst4CI ACNGT 5 cut(s) 91, 307, 361, 439, 872
Bst6I CTCTTC 5 cut(s) 695, 831, 1025, 1103, 1298
BstACI GRCGYC 2 cut(s) 798, 1314
BstAPI GCANNNNNTGC 1 cut(s) 1535
BstC8I GCNNGC 4 cut(s) 159, 554, 1318, 1644
BstDEI CTNAG 9 cut(s) 184, 446, 455, 970, 1428, 1443, 1479, 1705, 1791
BstDSI CCRYGG 3 cut(s) 918, 1584, 1602
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstF5I GGATG 7 cut(s) 18, 105, 466, 741, 745, 1093, 1630
BstFNI CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
BstH2I RGCGCY 1 cut(s) 503
BstHHI GCGC 4 cut(s) 502, 587, 910, 1486
BstKTI GATC 9 cut(s) 134, 284, 402, 855, 1037, 1136, 1264, 1576, 1810
BstMAI GTCTC 4 cut(s) 833, 1546, 1736, 1794
BstMBI GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
BstMCI CGRYCG 2 cut(s) 178, 1698
BstMWI GCNNNNNNNGC 8 cut(s) 158, 482, 562, 1201, 1252, 1313, 1433, 1535
BstNI CCWGG 9 cut(s) 115, 154, 375, 488, 773, 1020, 1094, 1286, 1736
BstNSI RCATGY 3 cut(s) 412, 763, 1045
BstSFI CTRYAG 1 cut(s) 1527
BstUI CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
BstV1I GCAGC 5 cut(s) 922, 1459, 1513, 1633, 1636
BstV2I GAAGAC 1 cut(s) 138
BstX2I RGATCY 3 cut(s) 281, 1034, 1261
BstXI CCANNNNNNTGG 1 cut(s) 1100
BstYI RGATCY 3 cut(s) 281, 1034, 1261
BstZI CGGCCG 1 cut(s) 1695
BsuI GTATCC 3 cut(s) 118, 420, 860
BtgI CCRYGG 3 cut(s) 918, 1584, 1602
BtgZI GCGATG 1 cut(s) 1017
BtsCI GGATG 7 cut(s) 18, 105, 466, 741, 745, 1093, 1630
BtsIMutI CAGTG 5 cut(s) 312, 444, 978, 993, 1077
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 4 cut(s) 159, 554, 1318, 1644
CaiI CAGNNNCTG 2 cut(s) 1210, 1535
CciI TCATGA 1 cut(s) 1671
CfoI GCGC 4 cut(s) 502, 587, 910, 1486
Cfr10I RCCGGY 3 cut(s) 177, 964, 1781
Cfr13I GGNCC 7 cut(s) 79, 219, 292, 357, 769, 1139, 1248
Cfr42I CCGCGG 1 cut(s) 1587
Cfr9I CCCGGG 2 cut(s) 594, 1506
CseI GACGC 2 cut(s) 896, 1322
CspAI ACCGGT 2 cut(s) 177, 1781
DdeI CTNAG 9 cut(s) 184, 446, 455, 970, 1428, 1443, 1479, 1705, 1791
DpnI GATC 9 cut(s) 133, 283, 401, 854, 1036, 1135, 1263, 1575, 1809
DpnII GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
DriI GACNNNNNGTC 1 cut(s) 808
EaeI YGGCCR 8 cut(s) 309, 471, 534, 921, 1081, 1434, 1695, 1767
EagI CGGCCG 1 cut(s) 1695
Eam1104I CTCTTC 5 cut(s) 695, 831, 1025, 1103, 1298
Eam1105I GACNNNNNGTC 1 cut(s) 808
EarI CTCTTC 5 cut(s) 695, 831, 1025, 1103, 1298
Ecl136II GAGCTC 1 cut(s) 630
EclXI CGGCCG 1 cut(s) 1695
Eco130I CCWWGG 3 cut(s) 523, 805, 918
Eco24I GRGCYC 1 cut(s) 632
Eco31I GGTCTC 3 cut(s) 833, 1736, 1794
Eco32I GATATC 1 cut(s) 172
Eco47I GGWCC 4 cut(s) 79, 219, 357, 1248
Eco52I CGGCCG 1 cut(s) 1695
Eco53kI GAGCTC 1 cut(s) 630
Eco57I CTGAAG 4 cut(s) 437, 719, 1286, 1358
Eco88I CYCGRG 4 cut(s) 317, 594, 1129, 1506
EcoICRI GAGCTC 1 cut(s) 630
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 3 cut(s) 79, 219, 292
EcoRII CCWGG 9 cut(s) 113, 152, 373, 486, 771, 1018, 1092, 1284, 1734
EcoRV GATATC 1 cut(s) 172
EcoT14I CCWWGG 3 cut(s) 523, 805, 918
EcoT38I GRGCYC 1 cut(s) 632
ErhI CCWWGG 3 cut(s) 523, 805, 918
Esp3I CGTCTC 1 cut(s) 1546
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FaqI GGGAC 5 cut(s) 65, 370, 557, 1427, 1523
FauI CCCGC 5 cut(s) 1177, 1404, 1479, 1591, 1719
FblI GTMKAC 3 cut(s) 195, 405, 801
FokI GGATG 7 cut(s) 25, 112, 473, 748, 752, 1100, 1637
FriOI GRGCYC 1 cut(s) 632
FspBI CTAG 2 cut(s) 668, 806
GlaI GCGC 4 cut(s) 501, 586, 909, 1485
GsuI CTGGAG 3 cut(s) 1421, 1589, 1757
HaeII RGCGCY 1 cut(s) 503
HgaI GACGC 2 cut(s) 896, 1322
HhaI GCGC 4 cut(s) 502, 587, 910, 1486
Hin1I GRCGYC 2 cut(s) 798, 1314
Hin6I GCGC 4 cut(s) 500, 585, 908, 1484
HinP1I GCGC 4 cut(s) 500, 585, 908, 1484
HincII GTYRAC 1 cut(s) 802
HindII GTYRAC 1 cut(s) 802
HinfI GANTC 8 cut(s) 104, 254, 478, 511, 823, 1415, 1511, 1532
HphI GGTGA 7 cut(s) 278, 847, 884, 1034, 1081, 1381, 1481
Hpy166II GTNNAC 6 cut(s) 196, 342, 406, 802, 1077, 1303
Hpy188III TCNNGA 5 cut(s) 59, 317, 1568, 1636, 1672
Hpy8I GTNNAC 6 cut(s) 196, 342, 406, 802, 1077, 1303
Hpy99I CGWCG 7 cut(s) 263, 371, 800, 803, 890, 1147, 1316
HpyCH4III ACNGT 5 cut(s) 91, 307, 361, 439, 872
HpyCH4IV ACGT 2 cut(s) 798, 1073
HpyCH4V TGCA 3 cut(s) 790, 1045, 1529
HpyF10VI GCNNNNNNNGC 8 cut(s) 158, 482, 562, 1201, 1252, 1313, 1433, 1535
HpyF3I CTNAG 9 cut(s) 184, 446, 455, 970, 1428, 1443, 1479, 1705, 1791
HpySE526I ACGT 2 cut(s) 798, 1073
Hsp92I GRCGYC 2 cut(s) 798, 1314
HspAI GCGC 4 cut(s) 500, 585, 908, 1484
KpnI GGTACC 2 cut(s) 90, 1782
KspI CCGCGG 1 cut(s) 1587
Kzo9I GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
LmnI GCTCC 9 cut(s) 442, 522, 627, 687, 895, 995, 999, 1408, 1459
Lsp1109I GCAGC 5 cut(s) 922, 1459, 1513, 1633, 1636
LweI GCATC 3 cut(s) 733, 772, 1629
MaeI CTAG 2 cut(s) 668, 806
MaeII ACGT 2 cut(s) 798, 1073
MaeIII GTNAC 4 cut(s) 301, 895, 1011, 1069
MalI GATC 9 cut(s) 133, 283, 401, 854, 1036, 1135, 1263, 1575, 1809
MbiI CCGCTC 1 cut(s) 1411
MboI GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
MflI RGATCY 3 cut(s) 281, 1034, 1261
MhlI GDGCHC 1 cut(s) 632
MlsI TGGCCA 2 cut(s) 311, 536
MluCI AATT 3 cut(s) 16, 200, 1718
MluNI TGGCCA 2 cut(s) 311, 536
MlyI GAGTC 5 cut(s) 263, 832, 1409, 1505, 1541
MmeI TCCRAC 1 cut(s) 282
Mox20I TGGCCA 2 cut(s) 311, 536
MscI TGGCCA 2 cut(s) 311, 536
MseI TTAA 1 cut(s) 1680
MslI CAYNNNNRTG 3 cut(s) 389, 764, 950
Msp20I TGGCCA 2 cut(s) 311, 536
MspA1I CMGCKG 2 cut(s) 1450, 1586
Mva1269I GAATGC 2 cut(s) 324, 1147
MvaI CCWGG 9 cut(s) 115, 154, 375, 488, 773, 1020, 1094, 1286, 1736
MvnI CGCG 6 cut(s) 476, 585, 587, 908, 1486, 1586
MwoI GCNNNNNNNGC 8 cut(s) 158, 482, 562, 1201, 1252, 1313, 1433, 1535
NcoI CCATGG 1 cut(s) 918
NdeII GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
NlaIV GGNNCC 9 cut(s) 57, 81, 88, 220, 283, 294, 358, 683, 1780
NmeAIII GCCGAG 1 cut(s) 360
NmuCI GTSAC 3 cut(s) 301, 895, 1069
NspI RCATGY 3 cut(s) 412, 763, 1045
PagI TCATGA 1 cut(s) 1671
PaqCI CACCTGC 1 cut(s) 1357
PasI CCCWGGG 1 cut(s) 487
PcsI WCGNNNNNNNCGW 5 cut(s) 134, 221, 818, 1227, 1317
PctI GAATGC 2 cut(s) 324, 1147
PfeI GAWTC 3 cut(s) 104, 478, 511
PflMI CCANNNNNTGG 1 cut(s) 754
PfoI TCCNGGA 1 cut(s) 1734
PinAI ACCGGT 2 cut(s) 177, 1781
PleI GAGTC 5 cut(s) 262, 831, 1409, 1505, 1540
PpsI GAGTC 5 cut(s) 262, 831, 1409, 1505, 1540
PpuMI RGGWCCY 2 cut(s) 79, 219
Psp124BI GAGCTC 1 cut(s) 632
Psp5II RGGWCCY 2 cut(s) 79, 219
Psp6I CCWGG 9 cut(s) 113, 152, 373, 486, 771, 1018, 1092, 1284, 1734
PspGI CCWGG 9 cut(s) 113, 152, 373, 486, 771, 1018, 1092, 1284, 1734
PspN4I GGNNCC 9 cut(s) 57, 81, 88, 220, 283, 294, 358, 683, 1780
PspPI GGNCC 7 cut(s) 79, 219, 292, 357, 769, 1139, 1248
PspPPI RGGWCCY 2 cut(s) 79, 219
PstI CTGCAG 1 cut(s) 1531
PstNI CAGNNNCTG 2 cut(s) 1210, 1535
PsuI RGATCY 3 cut(s) 281, 1034, 1261
RseI CAYNNNNRTG 3 cut(s) 389, 764, 950
SacI GAGCTC 1 cut(s) 632
SacII CCGCGG 1 cut(s) 1587
SalI GTCGAC 1 cut(s) 800
SaqAI TTAA 1 cut(s) 1680
Sau3AI GATC 9 cut(s) 131, 281, 399, 852, 1034, 1133, 1261, 1573, 1807
Sau96I GGNCC 7 cut(s) 79, 219, 292, 357, 769, 1139, 1248
SchI GAGTC 5 cut(s) 263, 832, 1409, 1505, 1541
SduI GDGCHC 1 cut(s) 632
SfaNI GCATC 3 cut(s) 733, 772, 1629
SfcI CTRYAG 1 cut(s) 1527
Sfr303I CCGCGG 1 cut(s) 1587
SgrBI CCGCGG 1 cut(s) 1587
SinI GGWCC 4 cut(s) 79, 219, 357, 1248
SmaI CCCGGG 2 cut(s) 596, 1508
SmiMI CAYNNNNRTG 3 cut(s) 389, 764, 950
SmlI CTYRAG 1 cut(s) 1463
SmoI CTYRAG 1 cut(s) 1463
Sse9I AATT 3 cut(s) 16, 200, 1718
SspMI CTAG 2 cut(s) 668, 806
SstI GAGCTC 1 cut(s) 632
StyI CCWWGG 3 cut(s) 523, 805, 918
TaaI ACNGT 5 cut(s) 91, 307, 361, 439, 872
TaiI ACGT 2 cut(s) 801, 1076
TaqI TCGA 9 cut(s) 174, 224, 795, 801, 812, 1054, 1281, 1311, 1637
TaqII GACCGA 1 cut(s) 816
TasI AATT 3 cut(s) 16, 200, 1718
TatI WGTACW 1 cut(s) 1611
TauI GCSGC 6 cut(s) 476, 908, 1439, 1697, 1766, 1769
TfiI GAWTC 3 cut(s) 104, 478, 511
Tru1I TTAA 1 cut(s) 1680
Tru9I TTAA 1 cut(s) 1680
TscAI CASTG 5 cut(s) 312, 444, 978, 1000, 1084
TseFI GTSAC 3 cut(s) 301, 895, 1069
TseI GCWGC 5 cut(s) 910, 1447, 1526, 1646, 1649
Tsp45I GTSAC 3 cut(s) 301, 895, 1069
TspDTI ATGAA 8 cut(s) 29, 407, 631, 1230, 1248, 1370, 1688, 1725
TspMI CCCGGG 2 cut(s) 594, 1506
TspRI CASTG 5 cut(s) 312, 444, 978, 1000, 1084
Van91I CCANNNNNTGG 1 cut(s) 754
VpaK11BI GGWCC 4 cut(s) 79, 219, 357, 1248
XagI CCTNNNNNAGG 1 cut(s) 1283
XapI RAATTY 2 cut(s) 16, 1718
XceI RCATGY 3 cut(s) 412, 763, 1045
XmaI CCCGGG 2 cut(s) 594, 1506
XmaJI CCTAGG 1 cut(s) 805
XmiI GTMKAC 3 cut(s) 195, 405, 801
XspI CTAG 2 cut(s) 668, 806
ZraI GACGTC 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.